RLG00000020272

AT-rich interactive domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0006899
Physical Location & Seq
Reverse (-)
63105502 .. 63111062
5561 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020272

Sequence Viewer

Length: 2340 bp
ATGTTTCATGCTCAGGGAACTTGTAGTGTTCTTGTGGTCACTTGTGGAGAGATTTCGGAAGATAAACGTGGTAAGGACATTCCGGAGGATAAGCTGAGGTACCCGTTTCCGGAGTTGGTATCTTCAGGGCGTTTGGAGGTTCAAACTCTGACTAACCCAAGCAAAGAGGAGTTTTGTAAATTGCTTGAATCATATAAGCCGAATCTTGTATACTTGCAAGGAGAGCAGCTTGAAAATGATGAAGTTGGTTCTCTTACCTGGAGAGATACTGATTTGTCAACTGCTGAATCTATATCCGACATCTTTGATGCCACATTGCCTACAACTGTTTATTTGGAGGTTCCAAATGGCGAAGAATTGGCAGTGGCACTTCAATCAAAGGGAATTCCTTACGTGATATATTGGAAAGATGCATTTTCTACTTATGCTGCTTCCCACTTTCGACATGCTTTACTTTCAGTGGTACAAAGTTCATCAACTCATACATGGGATGCTTTCCAACTTGCACATGCTTCCTTTAGGCTCTACTGTGTACAAAACAACCATGTTGTTCATGCTAACTTAGATAAATCCAGAGCTGAGCTGGGCCCGTGCATTCTTGGTGAGCATTTGAAAATTAGTGTTGACCCCCCTGAAGCAGATATGGAGGAAGATGAAGAAGGTGCTACAGGTTCCCTTCCCGCTATAAAGATACACGATGATGATGTGAGCTTGAGATTTCTTGTTTGTGGGCAGCCCTCCACATTGGATGCAGCCATATTAGAACCATTGGAGGATGGTCTCAATGCCCTTCTAAACATCGAAATGCGTGGAAGCAAGCTTCATGGCAAGTTTAGTGCTCCTCCGCCACCTCTTCAGGCTGGCACATTTTCTCGTGGTGTTGTGACTATGCGTTGTGATATATCAACTTGTAGTTCTGCTCACATATCACTTCTTGTGTCGGGTAGTGCACAAACTTGCTTCGATGATCAGCTCTTGGAGAATCATATAAAGCATGAAGTCATTGAGATGAATCAACTAGTACATGCACTCCCCAATAATGACGCAAACAAATTACCTCTAGCGGAACCACGAAAATCTGCCGCAATTGCCTGTGGAGCTACAGTATTTGAAGTTAGCATGAAGGTTCCTGTATGGGCTTCACAGGTTTTGAGGCAGCTTGCACCTGATGTTTCTTATCATAGTTTAGTTGCACTTGGAATCGCCAGCATTCAGGGGTTACCAGTTGCTTCTTTTGAGAAAGATGATGCTGACCGCCTTCTTTTCTTCTGTTCAAGTCGAGGGAAAGATAGCAAGTCAAATGATTTCTTTGTTAGCAGCCCTCCTGCTTGGTTGAGACCACCTGCTCCTAGTAAGAAGAGATCTCGCCCATGCCAAGAGACAATCCCAGGCTTTCGTGGCAGCCAGGTGCTTCCAAATCTAGCTGCCTCTAAAGTAGAGGAAAATGAAAAAGGACTTGGAGCAGTGAATGGATTTAGCACACCATTGCTCCCGGCCAGGCAAAGATTAAAAACAGCTGCCATGCGGCCCATTCCTCATGTTCGTCGTCCTAAAATGACACCATTTTCTGGAATTTCTGAGGTAAATGGGCATGATGGAAGCCAGGTGGTGAAGGCTCATCTGCCTCCTGTTCCGCCCACAAAGCTCAATATTGTTGGATTGACTCCTACAACGCAACGAAAGTCGTACTCCAGCTCATCACAAGCTAAGCAGATTATTTCCTTGAATCCTCTGCCTTTAAAGAAACATGGTTGTGGTCGAGGCCCGATACATTCTTGCTTAGAGGAGGAGTTTTTGAAGGATGTAATGCAGTTTCTACTCCTCCGTGGACATAATCGACTCATTCCACAGGGTGGACTGACTGAGTTTCCAGATGCCATTCTCAATGGAAAACGTCTTGACCTCTACAACTTGTATAAAGAGGTGGTTACCAGAGGAGGCTTTCATGTTGGCAATGGCATCAACTGGAAAGGACAGATCTTTTCGAAGATGCGCAACTACACAATGACGAATAGAATGACTGGTGTTGGAAATACACTTAAAAGACATTACGAAACCTACCTTCTTGAATATGAGTTGGCTCATGATGATGTGGATGGAGAGTGTTGCTTATTGTGTCACAGTAGCGCAGCAGGGGATTGGGTAAACTGCGGAATATGTGGTGAATGGGCCCACTTTGGCTGTGACAGAAGACAGGGTCTTGGTGCCTTTAAGGATTATGCAAAAACAGATGGGCTGGAATACATTTGTCCGCATTGCAGTATTAGCAACTTCAAGAAGAAACCACAGAAAGTTACAAATGGATTTCCCCAAGGCTCAACACTATCACGGCCACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID

Protein Analysis

780

Amino Acids

85.66

Weight (kDa)

6.46

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 595 - 692 1.6e-13 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1351
Acc16I TGCGCA 1 cut(s) 1994
Acc36I ACCTGC 1 cut(s) 1351
Acc65I GGTACC 1 cut(s) 99
AccB1I GGYRCC 2 cut(s) 99, 2204
AccB7I CCANNNNNTGG 2 cut(s) 1568, 1853
AccI GTMKAC 1 cut(s) 210
AccIII TCCGGA 2 cut(s) 82, 109
AciI CCGC 9 cut(s) 681, 845, 1064, 1083, 1255, 1525, 1634, 2151, 2252
AcoI YGGCCR 2 cut(s) 1494, 2330
AcsI RAATTY 2 cut(s) 384, 1572
AcuI CTGAAG 3 cut(s) 108, 654, 839
AdeI CACNNNGTG 1 cut(s) 1853
AfaI GTAC 5 cut(s) 101, 465, 534, 1023, 1688
AfiI CCNNNNNNNGG 3 cut(s) 109, 1568, 1853
AhlI ACTAGT 1 cut(s) 1018
AjnI CCWGG 5 cut(s) 257, 1387, 1404, 1496, 1602
AjuI GAANNNNNNNTTGG 2 cut(s) 1440, 1472
Alw21I GWGCWC 2 cut(s) 841, 952
Alw26I GTCTC 3 cut(s) 785, 1330, 1373
Alw44I GTGCAC 1 cut(s) 948
Aor13HI TCCGGA 2 cut(s) 82, 109
AoxI GGCC 6 cut(s) 586, 1494, 1526, 1762, 2169, 2330
ApaI GGGCCC 2 cut(s) 590, 2173
ApaLI GTGCAC 1 cut(s) 948
ApoI RAATTY 2 cut(s) 384, 1572
Asp718I GGTACC 1 cut(s) 99
AspLEI GCGC 2 cut(s) 1995, 2129
AspS9I GGNCC 6 cut(s) 586, 587, 1527, 1763, 2169, 2170
AsuC2I CCSGG 1 cut(s) 1493
AsuHPI GGTGA 3 cut(s) 614, 1621, 2174
AsuII TTCGAA 1 cut(s) 1985
BaeGI GKGCMC 3 cut(s) 590, 952, 2173
BanI GGYRCC 2 cut(s) 99, 2204
BanII GRGCYC 2 cut(s) 590, 2173
BauI CACGAG 1 cut(s) 873
BbsI GAAGAC 1 cut(s) 2197
Bbv12I GWGCWC 2 cut(s) 841, 952
BbvCI CCTCAGC 1 cut(s) 95
BccI CCATC 4 cut(s) 770, 1589, 2090, 2225
BciT130I CCWGG 5 cut(s) 259, 1389, 1406, 1498, 1604
BclI TGATCA 1 cut(s) 967
BcnI CCSGG 1 cut(s) 1493
BcoDI GTCTC 3 cut(s) 785, 1330, 1373
BcuI ACTAGT 1 cut(s) 1018
BfaI CTAG 4 cut(s) 1019, 1061, 1350, 1421
BfmI CTRYAG 2 cut(s) 666, 1101
BfuAI ACCTGC 1 cut(s) 1351
BglII AGATCT 2 cut(s) 1361, 1977
BlpI GCTNAGC 2 cut(s) 579, 1707
Bme1390I CCNGG 6 cut(s) 259, 1389, 1406, 1493, 1498, 1604
BmgT120I GGNCC 6 cut(s) 586, 587, 1527, 1763, 2169, 2170
BmiI GGNNCC 8 cut(s) 101, 342, 588, 673, 1068, 1128, 2171, 2206
BmrFI CCNGG 6 cut(s) 259, 1389, 1406, 1493, 1498, 1604
BmsI GCATC 8 cut(s) 298, 400, 481, 739, 1237, 1864, 1968, 1980
BpiI GAAGAC 1 cut(s) 2197
BpmI CTGGAG 2 cut(s) 280, 1675
Bpu10I CCTNAGC 2 cut(s) 12, 95
Bpu1102I GCTNAGC 2 cut(s) 579, 1707
Bpu14I TTCGAA 1 cut(s) 1985
BpuEI CTTGAG 1 cut(s) 733
BpuMI CCSGG 1 cut(s) 1493
BsaAI YACGTR 1 cut(s) 394
BsaI GGTCTC 2 cut(s) 785, 1330
BsaJI CCNNGG 3 cut(s) 1387, 1825, 2311
BsaWI WCCGGW 2 cut(s) 82, 109
BsaXI ACNNNNNCTCC 6 cut(s) 1014, 1044, 1089, 1119, 1473, 1503
Bsc4I CCNNNNNNNGG 3 cut(s) 109, 1568, 1853
Bse1I ACTGG 3 cut(s) 1223, 1970, 2026
Bse3DI GCAATG 4 cut(s) 314, 1484, 1960, 2254
BseAI TCCGGA 2 cut(s) 82, 109
BseBI CCWGG 5 cut(s) 259, 1389, 1406, 1498, 1604
BseDI CCNNGG 3 cut(s) 1387, 1825, 2311
BseGI GGATG 5 cut(s) 496, 754, 781, 1807, 2101
BseLI CCNNNNNNNGG 3 cut(s) 109, 1568, 1853
BseMI GCAATG 4 cut(s) 314, 1484, 1960, 2254
BseMII CTCAG 5 cut(s) 26, 86, 570, 1569, 1854
BseNI ACTGG 3 cut(s) 1223, 1970, 2026
BseRI GAGGAG 6 cut(s) 182, 831, 1799, 1802, 1811, 1950
BseSI GKGCMC 3 cut(s) 590, 952, 2173
BseYI CCCAGC 1 cut(s) 583
BshFI GGCC 6 cut(s) 588, 1496, 1528, 1764, 2171, 2332
BshNI GGYRCC 2 cut(s) 99, 2204
BsiHKAI GWGCWC 2 cut(s) 841, 952
BsiSI CCGG 3 cut(s) 83, 110, 1493
BslI CCNNNNNNNGG 3 cut(s) 109, 1568, 1853
BsmAI GTCTC 3 cut(s) 785, 1330, 1373
BsmI GAATGC 2 cut(s) 594, 1209
BsnI GGCC 6 cut(s) 588, 1496, 1528, 1764, 2171, 2332
Bso31I GGTCTC 2 cut(s) 785, 1330
Bsp119I TTCGAA 1 cut(s) 1985
Bsp120I GGGCCC 2 cut(s) 586, 2169
Bsp1286I GDGCHC 4 cut(s) 590, 841, 952, 2173
Bsp13I TCCGGA 2 cut(s) 82, 109
Bsp1407I TGTACA 1 cut(s) 532
Bsp143I GATC 3 cut(s) 967, 1361, 1977
Bsp1720I GCTNAGC 2 cut(s) 579, 1707
BspACI CCGC 9 cut(s) 681, 845, 1064, 1083, 1255, 1525, 1634, 2151, 2252
BspANI GGCC 6 cut(s) 588, 1496, 1528, 1764, 2171, 2332
BspCNI CTCAG 5 cut(s) 25, 87, 571, 1570, 1855
BspEI TCCGGA 2 cut(s) 82, 109
BspHI TCATGA 1 cut(s) 2083
BspLI GGNNCC 8 cut(s) 101, 342, 588, 673, 1068, 1128, 2171, 2206
BspMI ACCTGC 1 cut(s) 1351
BspT104I TTCGAA 1 cut(s) 1985
BspT107I GGYRCC 2 cut(s) 99, 2204
BspTNI GGTCTC 2 cut(s) 785, 1330
BsrDI GCAATG 4 cut(s) 314, 1484, 1960, 2254
BsrGI TGTACA 1 cut(s) 532
BsrI ACTGG 3 cut(s) 1223, 1970, 2026
BssECI CCNNGG 3 cut(s) 1387, 1825, 2311
BssMI GATC 3 cut(s) 967, 1361, 1977
BssNAI GTATAC 1 cut(s) 211
BssSI CACGAG 1 cut(s) 873
BssT1I CCWWGG 1 cut(s) 2311
Bst1107I GTATAC 1 cut(s) 211
Bst2BI CACGAG 1 cut(s) 873
Bst2UI CCWGG 5 cut(s) 259, 1389, 1406, 1498, 1604
Bst4CI ACNGT 5 cut(s) 328, 530, 1105, 2123, 2337
Bst6I CTCTTC 2 cut(s) 858, 1352
BstAUI TGTACA 1 cut(s) 532
BstBAI YACGTR 1 cut(s) 394
BstBI TTCGAA 1 cut(s) 1985
BstC8I GCNNGC 4 cut(s) 818, 862, 1161, 1207
BstDEI CTNAG 8 cut(s) 12, 95, 562, 579, 1578, 1707, 1780, 1863
BstDSI CCRYGG 1 cut(s) 1825
BstEII GGTNACC 2 cut(s) 1218, 1927
BstF5I GGATG 5 cut(s) 496, 754, 781, 1807, 2101
BstHHI GCGC 2 cut(s) 1995, 2129
BstKTI GATC 3 cut(s) 970, 1364, 1980
BstMAI GTCTC 3 cut(s) 785, 1330, 1373
BstMBI GATC 3 cut(s) 967, 1361, 1977
BstMWI GCNNNNNNNGC 6 cut(s) 223, 1088, 1097, 1398, 1642, 2265
BstNI CCWGG 5 cut(s) 259, 1389, 1406, 1498, 1604
BstNSI RCATGY 3 cut(s) 449, 512, 1028
BstPI GGTNACC 2 cut(s) 1218, 1927
BstSCI CCNGG 6 cut(s) 257, 1387, 1404, 1491, 1496, 1602
BstSFI CTRYAG 2 cut(s) 666, 1101
BstSLI GKGCMC 3 cut(s) 590, 952, 2173
BstV2I GAAGAC 1 cut(s) 2197
BstX2I RGATCY 2 cut(s) 1361, 1977
BstYI RGATCY 2 cut(s) 1361, 1977
BstZ17I GTATAC 1 cut(s) 211
BsuRI GGCC 6 cut(s) 588, 1496, 1528, 1764, 2171, 2332
BtgI CCRYGG 1 cut(s) 1825
BtsCI GGATG 5 cut(s) 496, 754, 781, 1807, 2101
BtsI GCAGTG 2 cut(s) 369, 1470
BtsIMutI CAGTG 4 cut(s) 369, 465, 1470, 2333
BveI ACCTGC 1 cut(s) 1351
Cac8I GCNNGC 4 cut(s) 818, 862, 1161, 1207
CciI TCATGA 1 cut(s) 2083
CfoI GCGC 2 cut(s) 1995, 2129
Cfr13I GGNCC 6 cut(s) 586, 587, 1527, 1763, 2169, 2170
CseI GACGC 1 cut(s) 1052
Csp6I GTAC 5 cut(s) 100, 464, 533, 1022, 1687
CviQI GTAC 5 cut(s) 100, 464, 533, 1022, 1687
DdeI CTNAG 8 cut(s) 12, 95, 562, 579, 1578, 1707, 1780, 1863
DpnI GATC 3 cut(s) 969, 1363, 1979
DpnII GATC 3 cut(s) 967, 1361, 1977
DraI TTTAAA 1 cut(s) 1740
DraIII CACNNNGTG 1 cut(s) 1853
EaeI YGGCCR 2 cut(s) 1494, 2330
Eam1104I CTCTTC 2 cut(s) 858, 1352
EarI CTCTTC 2 cut(s) 858, 1352
EciI GGCGGA 2 cut(s) 834, 1623
Eco130I CCWWGG 1 cut(s) 2311
Eco24I GRGCYC 2 cut(s) 590, 2173
Eco31I GGTCTC 2 cut(s) 785, 1330
Eco57I CTGAAG 3 cut(s) 108, 654, 839
Eco91I GGTNACC 2 cut(s) 1218, 1927
EcoO65I GGTNACC 2 cut(s) 1218, 1927
EcoRI GAATTC 1 cut(s) 384
EcoRII CCWGG 5 cut(s) 257, 1387, 1404, 1496, 1602
EcoT14I CCWWGG 1 cut(s) 2311
EcoT22I ATGCAT 1 cut(s) 415
EcoT38I GRGCYC 2 cut(s) 590, 2173
ErhI CCWWGG 1 cut(s) 2311
FauI CCCGC 1 cut(s) 688
FbaI TGATCA 1 cut(s) 967
FblI GTMKAC 1 cut(s) 210
FokI GGATG 5 cut(s) 503, 761, 788, 1814, 2108
FriOI GRGCYC 2 cut(s) 590, 2173
FspBI CTAG 4 cut(s) 1019, 1061, 1350, 1421
FspI TGCGCA 1 cut(s) 1994
GlaI GCGC 2 cut(s) 1994, 2128
GsaI CCCAGC 1 cut(s) 587
GsuI CTGGAG 2 cut(s) 280, 1675
HaeIII GGCC 6 cut(s) 588, 1496, 1528, 1764, 2171, 2332
HapII CCGG 3 cut(s) 83, 110, 1493
HgaI GACGC 1 cut(s) 1052
HhaI GCGC 2 cut(s) 1995, 2129
Hin6I GCGC 2 cut(s) 1993, 2127
HinP1I GCGC 2 cut(s) 1993, 2127
HincII GTYRAC 2 cut(s) 279, 625
HindII GTYRAC 2 cut(s) 279, 625
HindIII AAGCTT 1 cut(s) 818
HinfI GANTC 9 cut(s) 188, 202, 287, 982, 1012, 1200, 1663, 1726, 1839
HpaII CCGG 3 cut(s) 83, 110, 1493
HphI GGTGA 3 cut(s) 614, 1621, 2174
Hpy166II GTNNAC 8 cut(s) 211, 279, 533, 625, 950, 1829, 1856, 2146
Hpy188I TCNGA 4 cut(s) 58, 150, 298, 1579
Hpy188III TCNNGA 9 cut(s) 83, 110, 573, 1569, 1871, 1898, 2066, 2084, 2275
Hpy8I GTNNAC 8 cut(s) 211, 279, 533, 625, 950, 1829, 1856, 2146
Hpy99I CGWCG 1 cut(s) 1548
HpyAV CCTTC 8 cut(s) 653, 686, 800, 1117, 1268, 1606, 1792, 2072
HpyCH4III ACNGT 5 cut(s) 328, 530, 1105, 2123, 2337
HpyCH4IV ACGT 3 cut(s) 67, 393, 1894
HpyF10VI GCNNNNNNNGC 6 cut(s) 223, 1088, 1097, 1398, 1642, 2265
HpyF3I CTNAG 8 cut(s) 12, 95, 562, 579, 1578, 1707, 1780, 1863
HpySE526I ACGT 3 cut(s) 67, 393, 1894
HspAI GCGC 2 cut(s) 1993, 2127
Kpn2I TCCGGA 2 cut(s) 82, 109
KpnI GGTACC 1 cut(s) 103
Ksp22I TGATCA 1 cut(s) 967
Kzo9I GATC 3 cut(s) 967, 1361, 1977
LmnI GCTCC 5 cut(s) 844, 1097, 1351, 1460, 1494
LweI GCATC 8 cut(s) 298, 400, 481, 739, 1237, 1864, 1968, 1980
MaeI CTAG 4 cut(s) 1019, 1061, 1350, 1421
MaeII ACGT 3 cut(s) 67, 393, 1894
MaeIII GTNAC 7 cut(s) 37, 883, 1218, 1927, 2117, 2183, 2293
MalI GATC 3 cut(s) 969, 1363, 1979
MboI GATC 3 cut(s) 967, 1361, 1977
MfeI CAATTG 1 cut(s) 1086
MflI RGATCY 2 cut(s) 1361, 1977
MhlI GDGCHC 4 cut(s) 590, 841, 952, 2173
MluCI AATT 7 cut(s) 179, 356, 384, 615, 1052, 1086, 1572
MlyI GAGTC 2 cut(s) 1657, 1833
MmeI TCCRAC 4 cut(s) 321, 523, 1636, 2008
Mph1103I ATGCAT 1 cut(s) 415
MroI TCCGGA 2 cut(s) 82, 109
MseI TTAA 4 cut(s) 1508, 1739, 2040, 2211
MslI CAYNNNNRTG 5 cut(s) 699, 803, 1007, 1752, 2088
MspA1I CMGCKG 1 cut(s) 1517
MspI CCGG 3 cut(s) 83, 110, 1493
MspR9I CCNGG 6 cut(s) 259, 1389, 1406, 1493, 1498, 1604
MunI CAATTG 1 cut(s) 1086
Mva1269I GAATGC 2 cut(s) 594, 1209
MvaI CCWGG 5 cut(s) 259, 1389, 1406, 1498, 1604
MwoI GCNNNNNNNGC 6 cut(s) 223, 1088, 1097, 1398, 1642, 2265
NciI CCSGG 1 cut(s) 1493
NdeII GATC 3 cut(s) 967, 1361, 1977
NlaIV GGNNCC 8 cut(s) 101, 342, 588, 673, 1068, 1128, 2171, 2206
NmuCI GTSAC 4 cut(s) 37, 883, 2117, 2183
NsbI TGCGCA 1 cut(s) 1994
NsiI ATGCAT 1 cut(s) 415
NspI RCATGY 3 cut(s) 449, 512, 1028
NspV TTCGAA 1 cut(s) 1985
PagI TCATGA 1 cut(s) 2083
PaqCI CACCTGC 1 cut(s) 1351
PctI GAATGC 2 cut(s) 594, 1209
PfeI GAWTC 7 cut(s) 188, 202, 287, 982, 1012, 1200, 1726
PflFI GACNNNGTC 1 cut(s) 2196
PflMI CCANNNNNTGG 2 cut(s) 1568, 1853
PleI GAGTC 2 cut(s) 1657, 1833
PpsI GAGTC 2 cut(s) 1657, 1833
Ppu21I YACGTR 1 cut(s) 394
Psp6I CCWGG 5 cut(s) 257, 1387, 1404, 1496, 1602
PspEI GGTNACC 2 cut(s) 1218, 1927
PspFI CCCAGC 1 cut(s) 583
PspGI CCWGG 5 cut(s) 257, 1387, 1404, 1496, 1602
PspN4I GGNNCC 8 cut(s) 101, 342, 588, 673, 1068, 1128, 2171, 2206
PspOMI GGGCCC 2 cut(s) 586, 2169
PspPI GGNCC 6 cut(s) 586, 587, 1527, 1763, 2169, 2170
PsuI RGATCY 2 cut(s) 1361, 1977
PsyI GACNNNGTC 1 cut(s) 2196
PvuII CAGCTG 1 cut(s) 1517
RsaI GTAC 5 cut(s) 101, 465, 534, 1023, 1688
RsaNI GTAC 5 cut(s) 100, 464, 533, 1022, 1687
RseI CAYNNNNRTG 5 cut(s) 699, 803, 1007, 1752, 2088
SaqAI TTAA 4 cut(s) 1508, 1739, 2040, 2211
Sau3AI GATC 3 cut(s) 967, 1361, 1977
Sau96I GGNCC 6 cut(s) 586, 587, 1527, 1763, 2169, 2170
SchI GAGTC 2 cut(s) 1657, 1833
ScrFI CCNGG 6 cut(s) 259, 1389, 1406, 1493, 1498, 1604
SduI GDGCHC 4 cut(s) 590, 841, 952, 2173
SfaNI GCATC 8 cut(s) 298, 400, 481, 739, 1237, 1864, 1968, 1980
SfcI CTRYAG 2 cut(s) 666, 1101
SfuI TTCGAA 1 cut(s) 1985
SmiMI CAYNNNNRTG 5 cut(s) 699, 803, 1007, 1752, 2088
SmlI CTYRAG 1 cut(s) 712
SmoI CTYRAG 1 cut(s) 712
SpeI ACTAGT 1 cut(s) 1018
Sse9I AATT 7 cut(s) 179, 356, 384, 615, 1052, 1086, 1572
SsiI CCGC 9 cut(s) 681, 845, 1064, 1083, 1255, 1525, 1634, 2151, 2252
SspI AATATT 1 cut(s) 1651
SspMI CTAG 4 cut(s) 1019, 1061, 1350, 1421
StyD4I CCNGG 6 cut(s) 257, 1387, 1404, 1491, 1496, 1602
StyI CCWWGG 1 cut(s) 2311
TaaI ACNGT 5 cut(s) 328, 530, 1105, 2123, 2337
TaiI ACGT 3 cut(s) 70, 396, 1897
TaqI TCGA 7 cut(s) 442, 801, 963, 1279, 1759, 1837, 1985
TasI AATT 7 cut(s) 179, 356, 384, 615, 1052, 1086, 1572
TatI WGTACW 2 cut(s) 532, 1021
TauI GCSGC 2 cut(s) 1085, 1528
TfiI GAWTC 7 cut(s) 188, 202, 287, 982, 1012, 1200, 1726
Tru1I TTAA 4 cut(s) 1508, 1739, 2040, 2211
Tru9I TTAA 4 cut(s) 1508, 1739, 2040, 2211
TscAI CASTG 4 cut(s) 369, 465, 1470, 2340
TseFI GTSAC 4 cut(s) 37, 883, 2117, 2183
Tsp45I GTSAC 4 cut(s) 37, 883, 2117, 2183
TspGWI ACGGA 1 cut(s) 1814
TspRI CASTG 4 cut(s) 369, 465, 1470, 2340
Tth111I GACNNNGTC 1 cut(s) 2196
Van91I CCANNNNNTGG 2 cut(s) 1568, 1853
VneI GTGCAC 1 cut(s) 948
XapI RAATTY 2 cut(s) 384, 1572
XceI RCATGY 3 cut(s) 449, 512, 1028
XcmI CCANNNNNNNNNTGG 1 cut(s) 580
XmiI GTMKAC 1 cut(s) 210
XspI CTAG 4 cut(s) 1019, 1061, 1350, 1421
Zsp2I ATGCAT 1 cut(s) 415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.