AT-rich interactive domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G43240 |
| fragaria_vesca | FvH4_6g35710 FvH4_6g35710 FvH4_6g35710 FvH4_6g35710 FvH4_6g35710 FvH4_6g35710 |
| malus_domestica | MD09G1173700.v1.1 MD17G1153300.v1.1 |
| prunus_persica | Prupe.3G031800_v2.0.a1 Prupe.3G031800_v2.0.a1 |
| pyrus_communis | pycom09g09110 pycom17g14620 |
| rosa_chinensis | RchiOBHm_Chr1g0338911 RchiOBHm_Chr2g0147711 |
| rosa_laevigata | RLG00000020272 |
| rosa_multiflora | Rmu_sc0000308.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00099380 |
| rosa_rugosa | Rorug02G0401200 Rorug02G0401200 Rorug02G0401300 |
| rosa_samantha | Rh2AG458400 Rh2BG471500 Rh2CG445700 Rh2DG480400 |
| rosa_wichuraiana | Rw2G037470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 933 |
| Acc36I | ACCTGC | 2 cut(s) | 234, 1446 |
| AccB1I | GGYRCC | 1 cut(s) | 320 |
| AccI | GTMKAC | 4 cut(s) | 222, 282, 290, 651 |
| AciI | CCGC | 3 cut(s) | 59, 590, 860 |
| AclI | AACGTT | 1 cut(s) | 633 |
| AcsI | RAATTY | 3 cut(s) | 63, 425, 842 |
| AcuI | CTGAAG | 4 cut(s) | 90, 318, 851, 1264 |
| AfaI | GTAC | 3 cut(s) | 477, 685, 1035 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 121, 1293 |
| AgsI | TTSAA | 4 cut(s) | 24, 155, 815, 1250 |
| AjnI | CCWGG | 2 cut(s) | 1400, 1418 |
| AluBI | AGCT | 8 cut(s) | 20, 241, 302, 595, 768, 832, 985, 1171 |
| AluI | AGCT | 8 cut(s) | 20, 241, 302, 595, 768, 832, 985, 1171 |
| Alw21I | GWGCWC | 2 cut(s) | 853, 964 |
| Alw26I | GTCTC | 3 cut(s) | 797, 1342, 1387 |
| AoxI | GGCC | 2 cut(s) | 209, 599 |
| ApeKI | GCWGC | 5 cut(s) | 374, 377, 440, 1168, 1329 |
| ApoI | RAATTY | 3 cut(s) | 63, 425, 842 |
| AspLEI | GCGC | 1 cut(s) | 934 |
| AspS9I | GGNCC | 1 cut(s) | 599 |
| AsuC2I | CCSGG | 1 cut(s) | 1293 |
| AsuHPI | GGTGA | 1 cut(s) | 626 |
| AsuII | TTCGAA | 1 cut(s) | 1122 |
| AxyI | CCTNAGG | 2 cut(s) | 136, 645 |
| BanI | GGYRCC | 1 cut(s) | 320 |
| BauI | CACGAG | 1 cut(s) | 885 |
| BbsI | GAAGAC | 2 cut(s) | 599, 1463 |
| Bbv12I | GWGCWC | 2 cut(s) | 853, 964 |
| BbvI | GCAGC | 5 cut(s) | 386, 389, 427, 1180, 1341 |
| BccI | CCATC | 3 cut(s) | 564, 782, 1295 |
| BceAI | ACGGC | 2 cut(s) | 108, 733 |
| BciT130I | CCWGG | 2 cut(s) | 1402, 1420 |
| BclI | TGATCA | 1 cut(s) | 979 |
| BcnI | CCSGG | 1 cut(s) | 1293 |
| BcoDI | GTCTC | 3 cut(s) | 797, 1342, 1387 |
| BfaI | CTAG | 2 cut(s) | 585, 1362 |
| BfmI | CTRYAG | 1 cut(s) | 1113 |
| BfuAI | ACCTGC | 2 cut(s) | 234, 1446 |
| BglII | AGATCT | 1 cut(s) | 312 |
| BisI | GCNGC | 5 cut(s) | 375, 378, 441, 1169, 1330 |
| BlsI | GCNGC | 5 cut(s) | 376, 379, 442, 1170, 1331 |
| Bme1390I | CCNGG | 3 cut(s) | 1293, 1402, 1420 |
| BmgT120I | GGNCC | 1 cut(s) | 599 |
| BmiI | GGNNCC | 5 cut(s) | 322, 354, 600, 676, 1140 |
| BmrFI | CCNGG | 3 cut(s) | 1293, 1402, 1420 |
| BmrI | ACTGGG | 1 cut(s) | 1217 |
| BmsI | GCATC | 3 cut(s) | 493, 751, 1249 |
| BmuI | ACTGGG | 1 cut(s) | 1217 |
| BpiI | GAAGAC | 2 cut(s) | 599, 1463 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1339, 1371 |
| Bpu14I | TTCGAA | 1 cut(s) | 1122 |
| BpuEI | CTTGAG | 2 cut(s) | 218, 745 |
| BpuMI | CCSGG | 1 cut(s) | 1293 |
| Bsa29I | ATCGAT | 1 cut(s) | 1376 |
| BsaAI | YACGTR | 1 cut(s) | 1037 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1263 |
| BsaI | GGTCTC | 2 cut(s) | 797, 1342 |
| BsaJI | CCNNGG | 4 cut(s) | 678, 1292, 1401, 1419 |
| BsaWI | WCCGGW | 1 cut(s) | 121 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 121, 1293 |
| Bse1I | ACTGG | 2 cut(s) | 1212, 1287 |
| Bse21I | CCTNAGG | 2 cut(s) | 136, 645 |
| Bse3DI | GCAATG | 3 cut(s) | 326, 1040, 1212 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1263 |
| BseBI | CCWGG | 2 cut(s) | 1402, 1420 |
| BseCI | ATCGAT | 1 cut(s) | 1376 |
| BseDI | CCNNGG | 4 cut(s) | 678, 1292, 1401, 1419 |
| BseGI | GGATG | 3 cut(s) | 508, 766, 793 |
| BseJI | GATNNNNATC | 1 cut(s) | 1263 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 121, 1293 |
| BseMI | GCAATG | 3 cut(s) | 326, 1040, 1212 |
| BseMII | CTCAG | 6 cut(s) | 26, 121, 150, 300, 636, 1339 |
| BseNI | ACTGG | 2 cut(s) | 1212, 1287 |
| BseRI | GAGGAG | 2 cut(s) | 843, 1347 |
| BseXI | GCAGC | 5 cut(s) | 386, 389, 427, 1180, 1341 |
| BseYI | CCCAGC | 2 cut(s) | 595, 872 |
| BshFI | GGCC | 2 cut(s) | 211, 601 |
| BshNI | GGYRCC | 1 cut(s) | 320 |
| BshVI | ATCGAT | 1 cut(s) | 1376 |
| BsiHKAI | GWGCWC | 2 cut(s) | 853, 964 |
| BsiSI | CCGG | 2 cut(s) | 122, 1292 |
| BslFI | GGGAC | 1 cut(s) | 889 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 121, 1293 |
| BsmAI | GTCTC | 3 cut(s) | 797, 1342, 1387 |
| BsmFI | GGGAC | 1 cut(s) | 889 |
| BsmI | GAATGC | 1 cut(s) | 1221 |
| BsnI | GGCC | 2 cut(s) | 211, 601 |
| Bso31I | GGTCTC | 2 cut(s) | 797, 1342 |
| Bsp119I | TTCGAA | 1 cut(s) | 1122 |
| Bsp1286I | GDGCHC | 2 cut(s) | 853, 964 |
| Bsp143I | GATC | 6 cut(s) | 312, 637, 979, 1264, 1373, 1377 |
| BspACI | CCGC | 3 cut(s) | 59, 590, 860 |
| BspANI | GGCC | 2 cut(s) | 211, 601 |
| BspCNI | CTCAG | 6 cut(s) | 25, 120, 149, 301, 637, 1338 |
| BspDI | ATCGAT | 1 cut(s) | 1376 |
| BspLI | GGNNCC | 5 cut(s) | 322, 354, 600, 676, 1140 |
| BspMI | ACCTGC | 2 cut(s) | 234, 1446 |
| BspT104I | TTCGAA | 1 cut(s) | 1122 |
| BspT107I | GGYRCC | 1 cut(s) | 320 |
| BspTNI | GGTCTC | 2 cut(s) | 797, 1342 |
| BsrDI | GCAATG | 3 cut(s) | 326, 1040, 1212 |
| BsrI | ACTGG | 2 cut(s) | 1212, 1287 |
| BssECI | CCNNGG | 4 cut(s) | 678, 1292, 1401, 1419 |
| BssMI | GATC | 6 cut(s) | 312, 637, 979, 1264, 1373, 1377 |
| BssNAI | GTATAC | 1 cut(s) | 223 |
| BssSI | CACGAG | 1 cut(s) | 885 |
| BssT1I | CCWWGG | 1 cut(s) | 678 |
| Bst1107I | GTATAC | 1 cut(s) | 223 |
| Bst2BI | CACGAG | 1 cut(s) | 885 |
| Bst2UI | CCWGG | 2 cut(s) | 1402, 1420 |
| Bst4CI | ACNGT | 5 cut(s) | 340, 542, 620, 1117, 1196 |
| Bst6I | CTCTTC | 5 cut(s) | 66, 174, 870, 1014, 1364 |
| BstBAI | YACGTR | 1 cut(s) | 1037 |
| BstBI | TTCGAA | 1 cut(s) | 1122 |
| BstC8I | GCNNGC | 6 cut(s) | 445, 746, 766, 830, 1173, 1219 |
| BstDEI | CTNAG | 7 cut(s) | 12, 107, 136, 309, 645, 988, 1325 |
| BstEII | GGTNACC | 1 cut(s) | 614 |
| BstF5I | GGATG | 3 cut(s) | 508, 766, 793 |
| BstHHI | GCGC | 1 cut(s) | 934 |
| BstKTI | GATC | 6 cut(s) | 315, 640, 982, 1267, 1376, 1380 |
| BstMAI | GTCTC | 3 cut(s) | 797, 1342, 1387 |
| BstMBI | GATC | 6 cut(s) | 312, 637, 979, 1264, 1373, 1377 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 371, 1100, 1109, 1218 |
| BstNI | CCWGG | 2 cut(s) | 1402, 1420 |
| BstNSI | RCATGY | 2 cut(s) | 461, 1107 |
| BstPI | GGTNACC | 1 cut(s) | 614 |
| BstSCI | CCNGG | 3 cut(s) | 1291, 1400, 1418 |
| BstSFI | CTRYAG | 1 cut(s) | 1113 |
| BstV1I | GCAGC | 5 cut(s) | 386, 389, 427, 1180, 1341 |
| BstV2I | GAAGAC | 2 cut(s) | 599, 1463 |
| BstX2I | RGATCY | 1 cut(s) | 312 |
| BstYI | RGATCY | 1 cut(s) | 312 |
| BstZ17I | GTATAC | 1 cut(s) | 223 |
| Bsu15I | ATCGAT | 1 cut(s) | 1376 |
| Bsu36I | CCTNAGG | 2 cut(s) | 136, 645 |
| BsuRI | GGCC | 2 cut(s) | 211, 601 |
| BsuTUI | ATCGAT | 1 cut(s) | 1376 |
| BtgZI | GCGATG | 1 cut(s) | 919 |
| BtsCI | GGATG | 3 cut(s) | 508, 766, 793 |
| BtsI | GCAGTG | 1 cut(s) | 964 |
| BtsIMutI | CAGTG | 3 cut(s) | 477, 964, 1205 |
| BveI | ACCTGC | 2 cut(s) | 234, 1446 |
| Cac8I | GCNNGC | 6 cut(s) | 445, 746, 766, 830, 1173, 1219 |
| CfoI | GCGC | 1 cut(s) | 934 |
| Cfr13I | GGNCC | 1 cut(s) | 599 |
| ClaI | ATCGAT | 1 cut(s) | 1376 |
| CseI | GACGC | 1 cut(s) | 1083 |
| Csp6I | GTAC | 3 cut(s) | 476, 684, 1034 |
| CviQI | GTAC | 3 cut(s) | 476, 684, 1034 |
| DdeI | CTNAG | 7 cut(s) | 12, 107, 136, 309, 645, 988, 1325 |
| DpnI | GATC | 6 cut(s) | 314, 639, 981, 1266, 1375, 1379 |
| DpnII | GATC | 6 cut(s) | 312, 637, 979, 1264, 1373, 1377 |
| Eam1104I | CTCTTC | 5 cut(s) | 66, 174, 870, 1014, 1364 |
| EarI | CTCTTC | 5 cut(s) | 66, 174, 870, 1014, 1364 |
| Eco130I | CCWWGG | 1 cut(s) | 678 |
| Eco31I | GGTCTC | 2 cut(s) | 797, 1342 |
| Eco57I | CTGAAG | 4 cut(s) | 90, 318, 851, 1264 |
| Eco81I | CCTNAGG | 2 cut(s) | 136, 645 |
| Eco91I | GGTNACC | 1 cut(s) | 614 |
| EcoO65I | GGTNACC | 1 cut(s) | 614 |
| EcoRII | CCWGG | 2 cut(s) | 1400, 1418 |
| EcoT14I | CCWWGG | 1 cut(s) | 678 |
| ErhI | CCWWGG | 1 cut(s) | 678 |
| FaqI | GGGAC | 1 cut(s) | 889 |
| FauNDI | CATATG | 2 cut(s) | 358, 520 |
| FbaI | TGATCA | 1 cut(s) | 979 |
| FblI | GTMKAC | 4 cut(s) | 222, 282, 290, 651 |
| Fnu4HI | GCNGC | 5 cut(s) | 375, 378, 441, 1169, 1330 |
| FokI | GGATG | 3 cut(s) | 515, 773, 800 |
| Fsp4HI | GCNGC | 5 cut(s) | 375, 378, 441, 1169, 1330 |
| FspBI | CTAG | 2 cut(s) | 585, 1362 |
| FspI | TGCGCA | 1 cut(s) | 933 |
| GlaI | GCGC | 1 cut(s) | 933 |
| GluI | GCNGC | 5 cut(s) | 375, 378, 441, 1169, 1330 |
| GsaI | CCCAGC | 2 cut(s) | 599, 876 |
| HaeIII | GGCC | 2 cut(s) | 211, 601 |
| HapII | CCGG | 2 cut(s) | 122, 1292 |
| HgaI | GACGC | 1 cut(s) | 1083 |
| HhaI | GCGC | 1 cut(s) | 934 |
| Hin6I | GCGC | 1 cut(s) | 932 |
| HinP1I | GCGC | 1 cut(s) | 932 |
| HincII | GTYRAC | 4 cut(s) | 283, 291, 1028, 1129 |
| HindII | GTYRAC | 4 cut(s) | 283, 291, 1028, 1129 |
| HindIII | AAGCTT | 2 cut(s) | 766, 830 |
| HinfI | GANTC | 8 cut(s) | 105, 200, 214, 292, 397, 994, 1024, 1321 |
| HpaI | GTTAAC | 1 cut(s) | 1129 |
| HpaII | CCGG | 2 cut(s) | 122, 1292 |
| HphI | GGTGA | 1 cut(s) | 626 |
| Hpy166II | GTNNAC | 8 cut(s) | 223, 283, 291, 652, 753, 1028, 1129, 1435 |
| Hpy188I | TCNGA | 5 cut(s) | 70, 110, 162, 310, 1078 |
| Hpy188III | TCNNGA | 4 cut(s) | 296, 644, 895, 1411 |
| Hpy8I | GTNNAC | 8 cut(s) | 223, 283, 291, 652, 753, 1028, 1129, 1435 |
| HpyAV | CCTTC | 4 cut(s) | 665, 1129, 1280, 1343 |
| HpyCH4III | ACNGT | 5 cut(s) | 340, 542, 620, 1117, 1196 |
| HpyCH4IV | ACGT | 3 cut(s) | 633, 1036, 1431 |
| HpyCH4V | TGCA | 8 cut(s) | 229, 365, 518, 764, 1040, 1103, 1145, 1205 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 371, 1100, 1109, 1218 |
| HpyF3I | CTNAG | 7 cut(s) | 12, 107, 136, 309, 645, 988, 1325 |
| HpySE526I | ACGT | 3 cut(s) | 633, 1036, 1431 |
| HspAI | GCGC | 1 cut(s) | 932 |
| Ksp22I | TGATCA | 1 cut(s) | 979 |
| KspAI | GTTAAC | 1 cut(s) | 1129 |
| Kzo9I | GATC | 6 cut(s) | 312, 637, 979, 1264, 1373, 1377 |
| LmnI | GCTCC | 5 cut(s) | 17, 592, 825, 856, 1474 |
| Lsp1109I | GCAGC | 5 cut(s) | 386, 389, 427, 1180, 1341 |
| LweI | GCATC | 3 cut(s) | 493, 751, 1249 |
| MaeI | CTAG | 2 cut(s) | 585, 1362 |
| MaeII | ACGT | 3 cut(s) | 633, 1036, 1431 |
| MaeIII | GTNAC | 4 cut(s) | 117, 614, 718, 895 |
| MalI | GATC | 6 cut(s) | 314, 639, 981, 1266, 1375, 1379 |
| MboI | GATC | 6 cut(s) | 312, 637, 979, 1264, 1373, 1377 |
| MfeI | CAATTG | 2 cut(s) | 52, 1098 |
| MflI | RGATCY | 1 cut(s) | 312 |
| MhlI | GDGCHC | 2 cut(s) | 853, 964 |
| MluCI | AATT | 8 cut(s) | 52, 63, 255, 425, 842, 1011, 1098, 1448 |
| MlyI | GAGTC | 4 cut(s) | 99, 209, 286, 1033 |
| MmeI | TCCRAC | 2 cut(s) | 535, 1452 |
| MseI | TTAA | 2 cut(s) | 806, 1128 |
| MslI | CAYNNNNRTG | 2 cut(s) | 711, 815 |
| MspI | CCGG | 2 cut(s) | 122, 1292 |
| MspR9I | CCNGG | 3 cut(s) | 1293, 1402, 1420 |
| MunI | CAATTG | 2 cut(s) | 52, 1098 |
| Mva1269I | GAATGC | 1 cut(s) | 1221 |
| MvaI | CCWGG | 2 cut(s) | 1402, 1420 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 371, 1100, 1109, 1218 |
| NciI | CCSGG | 1 cut(s) | 1293 |
| NdeI | CATATG | 2 cut(s) | 358, 520 |
| NdeII | GATC | 6 cut(s) | 312, 637, 979, 1264, 1373, 1377 |
| NlaIV | GGNNCC | 5 cut(s) | 322, 354, 600, 676, 1140 |
| NmuCI | GTSAC | 3 cut(s) | 614, 718, 895 |
| NsbI | TGCGCA | 1 cut(s) | 933 |
| NspI | RCATGY | 2 cut(s) | 461, 1107 |
| NspV | TTCGAA | 1 cut(s) | 1122 |
| PctI | GAATGC | 1 cut(s) | 1221 |
| PfeI | GAWTC | 4 cut(s) | 214, 397, 994, 1321 |
| PkrI | GCNGC | 5 cut(s) | 376, 379, 442, 1170, 1331 |
| PleI | GAGTC | 4 cut(s) | 99, 208, 286, 1032 |
| PpsI | GAGTC | 4 cut(s) | 99, 208, 286, 1032 |
| Ppu21I | YACGTR | 1 cut(s) | 1037 |
| Psp1406I | AACGTT | 1 cut(s) | 633 |
| Psp6I | CCWGG | 2 cut(s) | 1400, 1418 |
| PspEI | GGTNACC | 1 cut(s) | 614 |
| PspFI | CCCAGC | 2 cut(s) | 595, 872 |
| PspGI | CCWGG | 2 cut(s) | 1400, 1418 |
| PspN4I | GGNNCC | 5 cut(s) | 322, 354, 600, 676, 1140 |
| PspPI | GGNCC | 1 cut(s) | 599 |
| PsuI | RGATCY | 1 cut(s) | 312 |
| RsaI | GTAC | 3 cut(s) | 477, 685, 1035 |
| RsaNI | GTAC | 3 cut(s) | 476, 684, 1034 |
| RseI | CAYNNNNRTG | 2 cut(s) | 711, 815 |
| SalI | GTCGAC | 2 cut(s) | 281, 289 |
| SaqAI | TTAA | 2 cut(s) | 806, 1128 |
| SatI | GCNGC | 5 cut(s) | 375, 378, 441, 1169, 1330 |
| Sau3AI | GATC | 6 cut(s) | 312, 637, 979, 1264, 1373, 1377 |
| Sau96I | GGNCC | 1 cut(s) | 599 |
| SchI | GAGTC | 4 cut(s) | 99, 209, 286, 1033 |
| ScrFI | CCNGG | 3 cut(s) | 1293, 1402, 1420 |
| SduI | GDGCHC | 2 cut(s) | 853, 964 |
| SfaNI | GCATC | 3 cut(s) | 493, 751, 1249 |
| SfcI | CTRYAG | 1 cut(s) | 1113 |
| SfuI | TTCGAA | 1 cut(s) | 1122 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 711, 815 |
| SmlI | CTYRAG | 2 cut(s) | 197, 724 |
| SmoI | CTYRAG | 2 cut(s) | 197, 724 |
| Sse9I | AATT | 8 cut(s) | 52, 63, 255, 425, 842, 1011, 1098, 1448 |
| SsiI | CCGC | 3 cut(s) | 59, 590, 860 |
| SspMI | CTAG | 2 cut(s) | 585, 1362 |
| StyD4I | CCNGG | 3 cut(s) | 1291, 1400, 1418 |
| StyI | CCWWGG | 1 cut(s) | 678 |
| TaaI | ACNGT | 5 cut(s) | 340, 542, 620, 1117, 1196 |
| TaiI | ACGT | 3 cut(s) | 636, 1039, 1434 |
| TaqI | TCGA | 6 cut(s) | 282, 290, 454, 1017, 1122, 1376 |
| TasI | AATT | 8 cut(s) | 52, 63, 255, 425, 842, 1011, 1098, 1448 |
| TfiI | GAWTC | 4 cut(s) | 214, 397, 994, 1321 |
| Tru1I | TTAA | 2 cut(s) | 806, 1128 |
| Tru9I | TTAA | 2 cut(s) | 806, 1128 |
| TscAI | CASTG | 3 cut(s) | 477, 964, 1212 |
| TseFI | GTSAC | 3 cut(s) | 614, 718, 895 |
| TseI | GCWGC | 5 cut(s) | 374, 377, 440, 1168, 1329 |
| Tsp45I | GTSAC | 3 cut(s) | 614, 718, 895 |
| TspDTI | ATGAA | 7 cut(s) | 267, 474, 681, 824, 1023, 1148, 1469 |
| TspRI | CASTG | 3 cut(s) | 477, 964, 1212 |
| XapI | RAATTY | 3 cut(s) | 63, 425, 842 |
| XceI | RCATGY | 2 cut(s) | 461, 1107 |
| XmiI | GTMKAC | 4 cut(s) | 222, 282, 290, 651 |
| XspI | CTAG | 2 cut(s) | 585, 1362 |