AT-rich interactive domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G43240 |
| fragaria_vesca | FvH4_6g35710 FvH4_6g35710 FvH4_6g35710 FvH4_6g35710 FvH4_6g35710 FvH4_6g35710 |
| malus_domestica | MD09G1173700.v1.1 MD17G1153300.v1.1 |
| prunus_persica | Prupe.3G031800_v2.0.a1 Prupe.3G031800_v2.0.a1 |
| pyrus_communis | pycom09g09110 pycom17g14620 |
| rosa_chinensis | RchiOBHm_Chr1g0338911 RchiOBHm_Chr2g0147711 |
| rosa_laevigata | RLG00000020272 |
| rosa_multiflora | Rmu_sc0000308.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00099380 |
| rosa_rugosa | Rorug02G0401200 Rorug02G0401200 Rorug02G0401300 |
| rosa_samantha | Rh2AG458400 Rh2BG471500 Rh2CG445700 Rh2DG480400 |
| rosa_wichuraiana | Rw2G037470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1266 |
| AccII | CGCG | 1 cut(s) | 621 |
| AccIII | TCCGGA | 1 cut(s) | 121 |
| AclI | AACGTT | 1 cut(s) | 633 |
| AcoI | YGGCCR | 2 cut(s) | 1414, 2339 |
| AcsI | RAATTY | 5 cut(s) | 64, 77, 425, 842, 1584 |
| AcuI | CTGAAG | 5 cut(s) | 90, 318, 851, 1080, 1264 |
| AcyI | GRCGYC | 1 cut(s) | 1267 |
| AfaI | GTAC | 6 cut(s) | 477, 546, 685, 1035, 1697, 2252 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 121, 1580, 1621, 1862 |
| AgeI | ACCGGT | 1 cut(s) | 1399 |
| AjnI | CCWGG | 1 cut(s) | 1508 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1608, 1640 |
| Alw21I | GWGCWC | 2 cut(s) | 853, 964 |
| Alw26I | GTCTC | 3 cut(s) | 797, 1189, 1342 |
| Aor13HI | TCCGGA | 1 cut(s) | 121 |
| AoxI | GGCC | 6 cut(s) | 599, 1414, 1538, 1612, 2178, 2339 |
| ApaI | GGGCCC | 1 cut(s) | 2182 |
| ApoI | RAATTY | 5 cut(s) | 64, 77, 425, 842, 1584 |
| AsiGI | ACCGGT | 1 cut(s) | 1399 |
| AspLEI | GCGC | 2 cut(s) | 1269, 2138 |
| AspS9I | GGNCC | 4 cut(s) | 599, 1539, 2178, 2179 |
| AsuC2I | CCSGG | 1 cut(s) | 1835 |
| AsuHPI | GGTGA | 2 cut(s) | 626, 1930 |
| AxyI | CCTNAGG | 1 cut(s) | 645 |
| BaeGI | GKGCMC | 1 cut(s) | 2182 |
| BanI | GGYRCC | 1 cut(s) | 1266 |
| BanII | GRGCYC | 1 cut(s) | 2182 |
| BauI | CACGAG | 1 cut(s) | 885 |
| BbsI | GAAGAC | 2 cut(s) | 599, 1461 |
| Bbv12I | GWGCWC | 2 cut(s) | 853, 964 |
| BccI | CCATC | 7 cut(s) | 564, 757, 782, 1592, 1601, 2099, 2234 |
| BceAI | ACGGC | 2 cut(s) | 1330, 1429 |
| BciT130I | CCWGG | 1 cut(s) | 1510 |
| BclI | TGATCA | 1 cut(s) | 979 |
| BcnI | CCSGG | 1 cut(s) | 1835 |
| BcoDI | GTCTC | 3 cut(s) | 797, 1189, 1342 |
| BfaI | CTAG | 3 cut(s) | 585, 1362, 2075 |
| BfmI | CTRYAG | 1 cut(s) | 1113 |
| BfoI | RGCGCY | 1 cut(s) | 1270 |
| BglII | AGATCT | 3 cut(s) | 312, 1373, 1986 |
| BlpI | GCTNAGC | 1 cut(s) | 1716 |
| Bme1390I | CCNGG | 2 cut(s) | 1510, 1835 |
| BmgT120I | GGNCC | 4 cut(s) | 599, 1539, 2178, 2179 |
| BmiI | GGNNCC | 7 cut(s) | 354, 600, 676, 1140, 1268, 1323, 2180 |
| BmrFI | CCNGG | 2 cut(s) | 1510, 1835 |
| BmrI | ACTGGG | 1 cut(s) | 1217 |
| BmsI | GCATC | 7 cut(s) | 493, 751, 1249, 1250, 1873, 1977, 2280 |
| BmuI | ACTGGG | 1 cut(s) | 1217 |
| BpiI | GAAGAC | 2 cut(s) | 599, 1461 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1339, 1371 |
| BpmI | CTGGAG | 2 cut(s) | 1491, 2267 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1716 |
| BpuEI | CTTGAG | 3 cut(s) | 745, 1684, 1842 |
| BpuMI | CCSGG | 1 cut(s) | 1835 |
| BsaAI | YACGTR | 1 cut(s) | 1037 |
| BsaHI | GRCGYC | 1 cut(s) | 1267 |
| BsaI | GGTCTC | 2 cut(s) | 797, 1342 |
| BsaJI | CCNNGG | 4 cut(s) | 678, 1082, 1417, 1834 |
| BsaWI | WCCGGW | 2 cut(s) | 121, 1399 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 341, 371, 1602, 1632 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 121, 1580, 1621, 1862 |
| Bse118I | RCCGGY | 1 cut(s) | 1399 |
| Bse1I | ACTGG | 6 cut(s) | 1212, 1218, 1287, 1979, 2035, 2250 |
| Bse21I | CCTNAGG | 1 cut(s) | 645 |
| Bse3DI | GCAATG | 7 cut(s) | 326, 1040, 1212, 1482, 1539, 1969, 2263 |
| BseAI | TCCGGA | 1 cut(s) | 121 |
| BseBI | CCWGG | 1 cut(s) | 1510 |
| BseDI | CCNNGG | 4 cut(s) | 678, 1082, 1417, 1834 |
| BseGI | GGATG | 6 cut(s) | 283, 508, 749, 766, 793, 1816 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 121, 1580, 1621, 1862 |
| BseMI | GCAATG | 7 cut(s) | 326, 1040, 1212, 1482, 1539, 1969, 2263 |
| BseMII | CTCAG | 8 cut(s) | 26, 121, 300, 636, 1581, 1669, 1724, 1863 |
| BseNI | ACTGG | 6 cut(s) | 1212, 1218, 1287, 1979, 2035, 2250 |
| BseRI | GAGGAG | 7 cut(s) | 194, 1347, 1626, 1629, 1808, 1811, 1959 |
| BseSI | GKGCMC | 1 cut(s) | 2182 |
| BseX3I | CGGCCG | 1 cut(s) | 2339 |
| BseYI | CCCAGC | 4 cut(s) | 595, 872, 1262, 1325 |
| Bsh1236I | CGCG | 1 cut(s) | 621 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2342 |
| BshFI | GGCC | 6 cut(s) | 601, 1416, 1540, 1614, 2180, 2341 |
| BshNI | GGYRCC | 1 cut(s) | 1266 |
| BshTI | ACCGGT | 1 cut(s) | 1399 |
| BsiEI | CGRYCG | 1 cut(s) | 2342 |
| BsiHKAI | GWGCWC | 2 cut(s) | 853, 964 |
| BsiSI | CCGG | 3 cut(s) | 122, 1400, 1834 |
| BslFI | GGGAC | 2 cut(s) | 889, 1851 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 121, 1580, 1621, 1862 |
| BsmAI | GTCTC | 3 cut(s) | 797, 1189, 1342 |
| BsmFI | GGGAC | 2 cut(s) | 889, 1851 |
| BsnI | GGCC | 6 cut(s) | 601, 1416, 1540, 1614, 2180, 2341 |
| Bso31I | GGTCTC | 2 cut(s) | 797, 1342 |
| Bsp120I | GGGCCC | 1 cut(s) | 2178 |
| Bsp1286I | GDGCHC | 3 cut(s) | 853, 964, 2182 |
| Bsp13I | TCCGGA | 1 cut(s) | 121 |
| Bsp1407I | TGTACA | 1 cut(s) | 544 |
| Bsp143I | GATC | 7 cut(s) | 312, 637, 720, 979, 1307, 1373, 1986 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1716 |
| BspANI | GGCC | 6 cut(s) | 601, 1416, 1540, 1614, 2180, 2341 |
| BspCNI | CTCAG | 8 cut(s) | 25, 120, 301, 637, 1582, 1668, 1723, 1864 |
| BspEI | TCCGGA | 1 cut(s) | 121 |
| BspFNI | CGCG | 1 cut(s) | 621 |
| BspHI | TCATGA | 1 cut(s) | 2092 |
| BspLI | GGNNCC | 7 cut(s) | 354, 600, 676, 1140, 1268, 1323, 2180 |
| BspQI | GCTCTTC | 1 cut(s) | 1711 |
| BspT107I | GGYRCC | 1 cut(s) | 1266 |
| BspTNI | GGTCTC | 2 cut(s) | 797, 1342 |
| BsrDI | GCAATG | 7 cut(s) | 326, 1040, 1212, 1482, 1539, 1969, 2263 |
| BsrFI | RCCGGY | 1 cut(s) | 1399 |
| BsrGI | TGTACA | 1 cut(s) | 544 |
| BsrI | ACTGG | 6 cut(s) | 1212, 1218, 1287, 1979, 2035, 2250 |
| BssAI | RCCGGY | 1 cut(s) | 1399 |
| BssECI | CCNNGG | 4 cut(s) | 678, 1082, 1417, 1834 |
| BssMI | GATC | 7 cut(s) | 312, 637, 720, 979, 1307, 1373, 1986 |
| BssNI | GRCGYC | 1 cut(s) | 1267 |
| BssSI | CACGAG | 1 cut(s) | 885 |
| BssT1I | CCWWGG | 2 cut(s) | 678, 1417 |
| Bst2BI | CACGAG | 1 cut(s) | 885 |
| Bst2UI | CCWGG | 1 cut(s) | 1510 |
| Bst4CI | ACNGT | 7 cut(s) | 340, 542, 1117, 1196, 2132, 2159, 2332 |
| Bst6I | CTCTTC | 5 cut(s) | 66, 870, 1014, 1364, 1711 |
| BstACI | GRCGYC | 1 cut(s) | 1267 |
| BstAUI | TGTACA | 1 cut(s) | 544 |
| BstBAI | YACGTR | 1 cut(s) | 1037 |
| BstC8I | GCNNGC | 5 cut(s) | 445, 746, 766, 830, 1173 |
| BstDSI | CCRYGG | 1 cut(s) | 1082 |
| BstEII | GGTNACC | 2 cut(s) | 614, 1936 |
| BstF5I | GGATG | 6 cut(s) | 283, 508, 749, 766, 793, 1816 |
| BstFNI | CGCG | 1 cut(s) | 621 |
| BstH2I | RGCGCY | 1 cut(s) | 1270 |
| BstHHI | GCGC | 2 cut(s) | 1269, 2138 |
| BstKTI | GATC | 7 cut(s) | 315, 640, 723, 982, 1310, 1376, 1989 |
| BstMAI | GTCTC | 3 cut(s) | 797, 1189, 1342 |
| BstMBI | GATC | 7 cut(s) | 312, 637, 720, 979, 1307, 1373, 1986 |
| BstMCI | CGRYCG | 1 cut(s) | 2342 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 371, 1100, 1109, 1770, 2274 |
| BstNI | CCWGG | 1 cut(s) | 1510 |
| BstNSI | RCATGY | 2 cut(s) | 461, 1107 |
| BstPI | GGTNACC | 2 cut(s) | 614, 1936 |
| BstSCI | CCNGG | 2 cut(s) | 1508, 1833 |
| BstSFI | CTRYAG | 1 cut(s) | 1113 |
| BstSLI | GKGCMC | 1 cut(s) | 2182 |
| BstUI | CGCG | 1 cut(s) | 621 |
| BstV2I | GAAGAC | 2 cut(s) | 599, 1461 |
| BstX2I | RGATCY | 3 cut(s) | 312, 1373, 1986 |
| BstYI | RGATCY | 3 cut(s) | 312, 1373, 1986 |
| BstZI | CGGCCG | 1 cut(s) | 2339 |
| Bsu36I | CCTNAGG | 1 cut(s) | 645 |
| BsuRI | GGCC | 6 cut(s) | 601, 1416, 1540, 1614, 2180, 2341 |
| BtgI | CCRYGG | 1 cut(s) | 1082 |
| BtgZI | GCGATG | 1 cut(s) | 919 |
| BtsCI | GGATG | 6 cut(s) | 283, 508, 749, 766, 793, 1816 |
| BtsI | GCAGTG | 1 cut(s) | 964 |
| BtsIMutI | CAGTG | 4 cut(s) | 477, 964, 1205, 1869 |
| Cac8I | GCNNGC | 5 cut(s) | 445, 746, 766, 830, 1173 |
| CciI | TCATGA | 1 cut(s) | 2092 |
| CfoI | GCGC | 2 cut(s) | 1269, 2138 |
| Cfr10I | RCCGGY | 1 cut(s) | 1399 |
| Cfr13I | GGNCC | 4 cut(s) | 599, 1539, 2178, 2179 |
| Csp6I | GTAC | 6 cut(s) | 476, 545, 684, 1034, 1696, 2251 |
| CspAI | ACCGGT | 1 cut(s) | 1399 |
| CviQI | GTAC | 6 cut(s) | 476, 545, 684, 1034, 1696, 2251 |
| DinI | GGCGCC | 1 cut(s) | 1268 |
| DpnI | GATC | 7 cut(s) | 314, 639, 722, 981, 1309, 1375, 1988 |
| DpnII | GATC | 7 cut(s) | 312, 637, 720, 979, 1307, 1373, 1986 |
| DraI | TTTAAA | 1 cut(s) | 1749 |
| EaeI | YGGCCR | 2 cut(s) | 1414, 2339 |
| EagI | CGGCCG | 1 cut(s) | 2339 |
| Eam1104I | CTCTTC | 5 cut(s) | 66, 870, 1014, 1364, 1711 |
| EarI | CTCTTC | 5 cut(s) | 66, 870, 1014, 1364, 1711 |
| EciI | GGCGGA | 1 cut(s) | 843 |
| EclXI | CGGCCG | 1 cut(s) | 2339 |
| Eco130I | CCWWGG | 2 cut(s) | 678, 1417 |
| Eco24I | GRGCYC | 1 cut(s) | 2182 |
| Eco31I | GGTCTC | 2 cut(s) | 797, 1342 |
| Eco52I | CGGCCG | 1 cut(s) | 2339 |
| Eco57I | CTGAAG | 5 cut(s) | 90, 318, 851, 1080, 1264 |
| Eco81I | CCTNAGG | 1 cut(s) | 645 |
| Eco91I | GGTNACC | 2 cut(s) | 614, 1936 |
| EcoO65I | GGTNACC | 2 cut(s) | 614, 1936 |
| EcoRII | CCWGG | 1 cut(s) | 1508 |
| EcoT14I | CCWWGG | 2 cut(s) | 678, 1417 |
| EcoT38I | GRGCYC | 1 cut(s) | 2182 |
| EgeI | GGCGCC | 1 cut(s) | 1268 |
| EheI | GGCGCC | 1 cut(s) | 1268 |
| ErhI | CCWWGG | 2 cut(s) | 678, 1417 |
| FaqI | GGGAC | 2 cut(s) | 889, 1851 |
| FauI | CCCGC | 1 cut(s) | 50 |
| FauNDI | CATATG | 3 cut(s) | 520, 1629, 2255 |
| FbaI | TGATCA | 1 cut(s) | 979 |
| FokI | GGATG | 6 cut(s) | 290, 515, 736, 773, 800, 1823 |
| FriOI | GRGCYC | 1 cut(s) | 2182 |
| FspBI | CTAG | 3 cut(s) | 585, 1362, 2075 |
| GlaI | GCGC | 2 cut(s) | 1268, 2137 |
| GsaI | CCCAGC | 4 cut(s) | 599, 876, 1266, 1329 |
| GsuI | CTGGAG | 2 cut(s) | 1491, 2267 |
| HaeII | RGCGCY | 1 cut(s) | 1270 |
| HaeIII | GGCC | 6 cut(s) | 601, 1416, 1540, 1614, 2180, 2341 |
| HapII | CCGG | 3 cut(s) | 122, 1400, 1834 |
| HhaI | GCGC | 2 cut(s) | 1269, 2138 |
| Hin1I | GRCGYC | 1 cut(s) | 1267 |
| Hin6I | GCGC | 2 cut(s) | 1267, 2136 |
| HinP1I | GCGC | 2 cut(s) | 1267, 2136 |
| HincII | GTYRAC | 3 cut(s) | 291, 1028, 2155 |
| HindII | GTYRAC | 3 cut(s) | 291, 1028, 2155 |
| HindIII | AAGCTT | 2 cut(s) | 766, 830 |
| HinfI | GANTC | 7 cut(s) | 200, 214, 397, 994, 1024, 1735, 1866 |
| HpaI | GTTAAC | 1 cut(s) | 2155 |
| HpaII | CCGG | 3 cut(s) | 122, 1400, 1834 |
| HphI | GGTGA | 2 cut(s) | 626, 1930 |
| Hpy166II | GTNNAC | 7 cut(s) | 223, 291, 545, 1028, 1865, 2155, 2261 |
| Hpy188I | TCNGA | 6 cut(s) | 70, 110, 162, 310, 1078, 1591 |
| Hpy8I | GTNNAC | 7 cut(s) | 223, 291, 545, 1028, 1865, 2155, 2261 |
| Hpy99I | CGWCG | 1 cut(s) | 1560 |
| HpyAV | CCTTC | 9 cut(s) | 517, 665, 1129, 1280, 1343, 1615, 1801, 2081, 2193 |
| HpyCH4III | ACNGT | 7 cut(s) | 340, 542, 1117, 1196, 2132, 2159, 2332 |
| HpyCH4IV | ACGT | 2 cut(s) | 633, 1036 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 371, 1100, 1109, 1770, 2274 |
| HpySE526I | ACGT | 2 cut(s) | 633, 1036 |
| Hsp92I | GRCGYC | 1 cut(s) | 1267 |
| HspAI | GCGC | 2 cut(s) | 1267, 2136 |
| KasI | GGCGCC | 1 cut(s) | 1266 |
| Kpn2I | TCCGGA | 1 cut(s) | 121 |
| Ksp22I | TGATCA | 1 cut(s) | 979 |
| KspAI | GTTAAC | 1 cut(s) | 2155 |
| Kzo9I | GATC | 7 cut(s) | 312, 637, 720, 979, 1307, 1373, 1986 |
| LguI | GCTCTTC | 1 cut(s) | 1711 |
| LmnI | GCTCC | 5 cut(s) | 17, 592, 825, 856, 1472 |
| LweI | GCATC | 7 cut(s) | 493, 751, 1249, 1250, 1873, 1977, 2280 |
| MaeI | CTAG | 3 cut(s) | 585, 1362, 2075 |
| MaeII | ACGT | 2 cut(s) | 633, 1036 |
| MaeIII | GTNAC | 6 cut(s) | 49, 614, 895, 1936, 2126, 2192 |
| MalI | GATC | 7 cut(s) | 314, 639, 722, 981, 1309, 1375, 1988 |
| MboI | GATC | 7 cut(s) | 312, 637, 720, 979, 1307, 1373, 1986 |
| MflI | RGATCY | 3 cut(s) | 312, 1373, 1986 |
| MhlI | GDGCHC | 3 cut(s) | 853, 964, 2182 |
| Mly113I | GGCGCC | 1 cut(s) | 1267 |
| MlyI | GAGTC | 2 cut(s) | 1033, 1860 |
| MmeI | TCCRAC | 3 cut(s) | 535, 1529, 2017 |
| MroI | TCCGGA | 1 cut(s) | 121 |
| MseI | TTAA | 7 cut(s) | 81, 806, 1670, 1748, 2049, 2154, 2220 |
| MslI | CAYNNNNRTG | 3 cut(s) | 711, 815, 2097 |
| MspA1I | CMGCKG | 1 cut(s) | 2344 |
| MspI | CCGG | 3 cut(s) | 122, 1400, 1834 |
| MspR9I | CCNGG | 2 cut(s) | 1510, 1835 |
| MvaI | CCWGG | 1 cut(s) | 1510 |
| MvnI | CGCG | 1 cut(s) | 621 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 371, 1100, 1109, 1770, 2274 |
| NarI | GGCGCC | 1 cut(s) | 1267 |
| NciI | CCSGG | 1 cut(s) | 1835 |
| NdeI | CATATG | 3 cut(s) | 520, 1629, 2255 |
| NdeII | GATC | 7 cut(s) | 312, 637, 720, 979, 1307, 1373, 1986 |
| NlaIV | GGNNCC | 7 cut(s) | 354, 600, 676, 1140, 1268, 1323, 2180 |
| NmuCI | GTSAC | 6 cut(s) | 49, 614, 895, 1936, 2126, 2192 |
| NspI | RCATGY | 2 cut(s) | 461, 1107 |
| PagI | TCATGA | 1 cut(s) | 2092 |
| PciSI | GCTCTTC | 1 cut(s) | 1711 |
| PfeI | GAWTC | 5 cut(s) | 200, 214, 397, 994, 1735 |
| PinAI | ACCGGT | 1 cut(s) | 1399 |
| PleI | GAGTC | 2 cut(s) | 1032, 1860 |
| PluTI | GGCGCC | 1 cut(s) | 1270 |
| PpsI | GAGTC | 2 cut(s) | 1032, 1860 |
| Ppu21I | YACGTR | 1 cut(s) | 1037 |
| Psp1406I | AACGTT | 1 cut(s) | 633 |
| Psp6I | CCWGG | 1 cut(s) | 1508 |
| PspEI | GGTNACC | 2 cut(s) | 614, 1936 |
| PspFI | CCCAGC | 4 cut(s) | 595, 872, 1262, 1325 |
| PspGI | CCWGG | 1 cut(s) | 1508 |
| PspN4I | GGNNCC | 7 cut(s) | 354, 600, 676, 1140, 1268, 1323, 2180 |
| PspOMI | GGGCCC | 1 cut(s) | 2178 |
| PspPI | GGNCC | 4 cut(s) | 599, 1539, 2178, 2179 |
| PsuI | RGATCY | 3 cut(s) | 312, 1373, 1986 |
| RsaI | GTAC | 6 cut(s) | 477, 546, 685, 1035, 1697, 2252 |
| RsaNI | GTAC | 6 cut(s) | 476, 545, 684, 1034, 1696, 2251 |
| RseI | CAYNNNNRTG | 3 cut(s) | 711, 815, 2097 |
| SapI | GCTCTTC | 1 cut(s) | 1711 |
| SaqAI | TTAA | 7 cut(s) | 81, 806, 1670, 1748, 2049, 2154, 2220 |
| Sau3AI | GATC | 7 cut(s) | 312, 637, 720, 979, 1307, 1373, 1986 |
| Sau96I | GGNCC | 4 cut(s) | 599, 1539, 2178, 2179 |
| SchI | GAGTC | 2 cut(s) | 1033, 1860 |
| ScrFI | CCNGG | 2 cut(s) | 1510, 1835 |
| SduI | GDGCHC | 3 cut(s) | 853, 964, 2182 |
| SfaNI | GCATC | 7 cut(s) | 493, 751, 1249, 1250, 1873, 1977, 2280 |
| SfcI | CTRYAG | 1 cut(s) | 1113 |
| SfoI | GGCGCC | 1 cut(s) | 1268 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 711, 815, 2097 |
| SmlI | CTYRAG | 3 cut(s) | 724, 1699, 1857 |
| SmoI | CTYRAG | 3 cut(s) | 724, 1699, 1857 |
| SspDI | GGCGCC | 1 cut(s) | 1266 |
| SspMI | CTAG | 3 cut(s) | 585, 1362, 2075 |
| StyD4I | CCNGG | 2 cut(s) | 1508, 1833 |
| StyI | CCWWGG | 2 cut(s) | 678, 1417 |
| TaaI | ACNGT | 7 cut(s) | 340, 542, 1117, 1196, 2132, 2159, 2332 |
| TaiI | ACGT | 2 cut(s) | 636, 1039 |
| TaqI | TCGA | 1 cut(s) | 454 |
| TatI | WGTACW | 2 cut(s) | 544, 2250 |
| TauI | GCSGC | 4 cut(s) | 859, 862, 2172, 2344 |
| TfiI | GAWTC | 5 cut(s) | 200, 214, 397, 994, 1735 |
| Tru1I | TTAA | 7 cut(s) | 81, 806, 1670, 1748, 2049, 2154, 2220 |
| Tru9I | TTAA | 7 cut(s) | 81, 806, 1670, 1748, 2049, 2154, 2220 |
| TscAI | CASTG | 4 cut(s) | 477, 964, 1212, 1876 |
| TseFI | GTSAC | 6 cut(s) | 49, 614, 895, 1936, 2126, 2192 |
| Tsp45I | GTSAC | 6 cut(s) | 49, 614, 895, 1936, 2126, 2192 |
| TspGWI | ACGGA | 2 cut(s) | 345, 1099 |
| TspRI | CASTG | 4 cut(s) | 477, 964, 1212, 1876 |
| XapI | RAATTY | 5 cut(s) | 64, 77, 425, 842, 1584 |
| XbaI | TCTAGA | 1 cut(s) | 2074 |
| XceI | RCATGY | 2 cut(s) | 461, 1107 |
| XspI | CTAG | 3 cut(s) | 585, 1362, 2075 |