FvH4_6g35710

AT-rich interactive domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0006899
Physical Location & Seq
Reverse (-)
28177451 .. 28185125
7675 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g35710.t4

Sequence Viewer

Length: 2340 bp
ATGTTTCATGCTCAGGGAACTTGTAGTGTGCTTGTGGTTACTTGTGGAGAGATTTCAGAAGATAAACGTGGTAAGGAGACCCCGGAGGATAAGCTGAGGTACCCGTTCCCGGAGTTGGTATCATCAGGTCGTTTGGAGGTTCAAACTCTGACTAACCCGAGTGAAGAGGAGTTTTGTAAATTGCTTGAATCGTATAAGCCGAATCTTGTTTACTTGCAAGGAGAGCAGCTTGAGAATGATGAAGTTGGTCCTCTTGTGTGGAGAGATGCCTACTTGTCAACTGCTGAATCTATGTCTGACATCTTTGATGCTACATTGCCTACAACTGTTTATTTGGAGGTTCCAAATGGAGAAGAATTGGCAGTGGCACTTCAATCAAAGGGAATTCCTTACGTGATATATTGGAAAGATGCAATTTCTACTTATGCTGCTTGCCACTTTCGACATGCTTTACTTTCAGTAGTACAAAGTTCATCAACTCATACGTGGGATGCTTTCCAACTCGCGCATGCTTCCTTTAGGCTTTACTGTGTTCAAAACGACCATGTTGTTCGTGTGAACTTAGATAAACCCAGTGCTGAGCTGGGCCCATGCATTCTCGGTGAGCATTTGAAAATCAGTGTCGACCCCCCTGAAGCAGATATGGAGGAAGACGAAGAAGGTGCTACGGGTTCCCTTCCAGCTATAAAGATACACGATGATGATGTGAGCTTGAGATTTCTTGTTTGTGGGCAGCCCTCCACATTGGATGCAGGCATATTAGAACCGTTGGAGGATGGTCTCAATGCCCTTTTAAACATAGAAATGCGTGGAAGCAAGCTCCATGGCAAGTTTAGTGCTCCTCCGCCACCTCTTCAGGCTGGCACATTTTCTCGCGGTGTTGTGACTATGCGGTGTGATATATCAACTTGTAGTTCTGCTCACATATCACTTCTTGTCTCGGGTAGCGCACAAACTTGCTTCGATGATCAGCTCTTGGAGAATCATATAAAGCATGAGGTCATTGAAATAAATCAACTAGTACATGCGGTCCCCAACAATGACAGAAACAAATTACCTTTAGTGGAACCACGAAAATCTGCCGCAATTGCCTGTGGAGCTACCGTATTTGAAGTTAGCATGAAGGTTCCTGTATGGGCTTCACAGGTTTTGAGGCAGCTTGCACCTGATGTTTCGTATCGTAGTTTAGTTTCACTTGGAATCGCCAGCATTCAGGGGTTACCTGTTGCTTCTTTTGAGAAAGATGATGCTGACCGCCTTCTTTTCTTCTGTTCAAGTCGAACGAAAGATAGTCAGTTAAATGACTTATTTCTTAGCACCCCTCCTGCTTGGTTGAGACCACCTGCTCCTAGTAAGAAGAGATCTCGCCTGTGCCAAGAGGCAATACCAGGCTTTCGTAATAGGCAGGGGCTTCCAAATCTTGCTGCTTCTAAAGTAGAAGAGAATGAGAAAGCACTTGGAGCAGTGAATGGATTTAGCACACCCTTACTCCCAGCCAGACAAAGATTAAAAACAGCAGCCATGCGGCCCATTCCTCATGTTCGTCGTCCTAAAATGACACCATTTTCTGGAATTTCTGAGGTTAATGGGCATGATGGCAGCCAGGTGGTGAAGGCTCATCTGCCTCCTGTTCCACCCACAAAGCTCAATATTGTTGGATTGACTCCTACTACGCAACGAAAGTCATACTCCAGCTCATCTCAGGCAAAGCAGATTATTTCCTTGAATCCTCTTCCTTTAAAGAAGCATGGTTGTGGTCGAGGCCCAATACATTCTTGCTTAGAGGAGGAGTTTTTGAAGGATGTAATGCAGTTTCTAATTCTCCGTGGACATAGTCGACTCATTCCACAGGGTGGACTGACTGAGTTTCCGGATGCCATTCTGAATGGAAAGCGTCTTGACCTCTACAACTTGTATAAAGAGGTGGTTACCAGAGGAGGCTTTCATGTTGGAAATGGGATCAACTGGAAAGGACAGATCTTCTCGAAGATGCGTAACTACACAATGACCAATAGAATGACTGGTGTTGGAAATACACTTAAAAGACATTACGAAACCTACCTTCTTGAATATGAGTTGGCTCATGATGATGTAGATGGAGAGTGTTGCTTATTGTGTCACAGTAGCGCAGCAGGGGATTGGGTAAACTGCGGAATATGTGGTGAGTGGGCCCACTTTGGCTGTGACAGAAGGCAGGGTCTCGGTGCCTTTAAGGATTATGCAAAAACAGATGGGCTGGAATACATTTGTCCACATTGCAGTATTAGCAACTTCAAGAAGAAACCGCAGAAAGTCACAAATGGATTTCCCCAAGGCTCAACACTATCACGGCCACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID

Protein Analysis

780

Amino Acids

85.9

Weight (kDa)

6.42

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 381 - 478 7.1e-14 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1351
Acc36I ACCTGC 1 cut(s) 1351
Acc65I GGTACC 1 cut(s) 99
AccB1I GGYRCC 2 cut(s) 99, 2204
AccB7I CCANNNNNTGG 2 cut(s) 1568, 1853
AccI GTMKAC 2 cut(s) 624, 1837
AccII CGCG 2 cut(s) 506, 876
AccIII TCCGGA 1 cut(s) 1870
AciI CCGC 9 cut(s) 845, 876, 892, 1028, 1083, 1255, 1525, 2151, 2285
AclWI GGATC 1 cut(s) 1967
AcoI YGGCCR 1 cut(s) 2330
AcsI RAATTY 2 cut(s) 384, 1572
AcuI CTGAAG 2 cut(s) 654, 839
AdeI CACNNNGTG 1 cut(s) 1853
AfaI GTAC 3 cut(s) 101, 465, 1023
AfiI CCNNNNNNNGG 4 cut(s) 109, 115, 1568, 1853
AhlI ACTAGT 1 cut(s) 1018
AjnI CCWGG 2 cut(s) 1387, 1602
Alw21I GWGCWC 1 cut(s) 841
Alw26I GTCTC 5 cut(s) 71, 785, 943, 1330, 2204
AlwI GGATC 1 cut(s) 1967
Ama87I CYCGRG 2 cut(s) 157, 940
Aor13HI TCCGGA 1 cut(s) 1870
AoxI GGCC 5 cut(s) 586, 1526, 1762, 2169, 2330
ApaI GGGCCC 2 cut(s) 590, 2173
ApeKI GCWGC 8 cut(s) 226, 428, 733, 1156, 1424, 1517, 1599, 2129
ApoI RAATTY 2 cut(s) 384, 1572
Asp718I GGTACC 1 cut(s) 99
AspLEI GCGC 3 cut(s) 508, 950, 2129
AspS9I GGNCC 8 cut(s) 248, 586, 587, 1030, 1527, 1763, 2169, 2170
AsuC2I CCSGG 2 cut(s) 83, 110
AsuHPI GGTGA 3 cut(s) 614, 1621, 2174
AvaI CYCGRG 2 cut(s) 157, 940
AvaII GGWCC 2 cut(s) 248, 1030
BaeGI GKGCMC 2 cut(s) 590, 2173
BanI GGYRCC 2 cut(s) 99, 2204
BanII GRGCYC 2 cut(s) 590, 2173
BbsI GAAGAC 1 cut(s) 657
Bbv12I GWGCWC 1 cut(s) 841
BbvCI CCTCAGC 1 cut(s) 95
BbvI GCAGC 8 cut(s) 238, 415, 745, 1168, 1411, 1529, 1611, 2141
BccI CCATC 4 cut(s) 770, 1589, 2090, 2225
BcgI CGANNNNNNTGC 2 cut(s) 644, 678
BciT130I CCWGG 2 cut(s) 1389, 1604
BclI TGATCA 1 cut(s) 967
BcnI CCSGG 2 cut(s) 83, 110
BcoDI GTCTC 5 cut(s) 71, 785, 943, 1330, 2204
BcuI ACTAGT 1 cut(s) 1018
BfaI CTAG 2 cut(s) 1019, 1350
BfuAI ACCTGC 1 cut(s) 1351
BglII AGATCT 2 cut(s) 1361, 1977
BlpI GCTNAGC 1 cut(s) 579
Bme1390I CCNGG 4 cut(s) 83, 110, 1389, 1604
Bme18I GGWCC 2 cut(s) 248, 1030
BmeT110I CYCGRG 2 cut(s) 157, 940
BmgT120I GGNCC 8 cut(s) 248, 586, 587, 1030, 1527, 1763, 2169, 2170
BmiI GGNNCC 9 cut(s) 101, 342, 588, 673, 1032, 1068, 1128, 2171, 2206
BmrFI CCNGG 4 cut(s) 83, 110, 1389, 1604
BmrI ACTGGG 1 cut(s) 567
BmsI GCATC 8 cut(s) 256, 298, 400, 481, 739, 1237, 1864, 1980
BmuI ACTGGG 1 cut(s) 567
BpiI GAAGAC 1 cut(s) 657
BpmI CTGGAG 1 cut(s) 1675
Bpu10I CCTNAGC 2 cut(s) 12, 95
Bpu1102I GCTNAGC 1 cut(s) 579
BpuEI CTTGAG 2 cut(s) 251, 733
BpuMI CCSGG 2 cut(s) 83, 110
BsaAI YACGTR 2 cut(s) 394, 486
BsaI GGTCTC 4 cut(s) 71, 785, 1330, 2204
BsaJI CCNNGG 4 cut(s) 81, 823, 1825, 2311
BsaWI WCCGGW 1 cut(s) 1870
BsaXI ACNNNNNCTCC 4 cut(s) 1089, 1119, 1473, 1503
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 115, 1568, 1853
Bse1I ACTGG 3 cut(s) 573, 1970, 2026
Bse3DI GCAATG 2 cut(s) 314, 2254
BseAI TCCGGA 1 cut(s) 1870
BseBI CCWGG 2 cut(s) 1389, 1604
BseDI CCNNGG 4 cut(s) 81, 823, 1825, 2311
BseGI GGATG 5 cut(s) 496, 754, 781, 1807, 1879
BseLI CCNNNNNNNGG 4 cut(s) 109, 115, 1568, 1853
BseMI GCAATG 2 cut(s) 314, 2254
BseMII CTCAG 6 cut(s) 26, 86, 570, 1569, 1715, 1854
BseNI ACTGG 3 cut(s) 573, 1970, 2026
BseRI GAGGAG 5 cut(s) 182, 831, 1799, 1802, 1950
BseSI GKGCMC 2 cut(s) 590, 2173
BseXI GCAGC 8 cut(s) 238, 415, 745, 1168, 1411, 1529, 1611, 2141
BseYI CCCAGC 2 cut(s) 583, 1492
Bsh1236I CGCG 2 cut(s) 506, 876
BshFI GGCC 5 cut(s) 588, 1528, 1764, 2171, 2332
BshNI GGYRCC 2 cut(s) 99, 2204
BsiHKAI GWGCWC 1 cut(s) 841
BsiHKCI CYCGRG 2 cut(s) 157, 940
BsiSI CCGG 3 cut(s) 83, 110, 1871
BslFI GGGAC 1 cut(s) 1016
BslI CCNNNNNNNGG 4 cut(s) 109, 115, 1568, 1853
BsmAI GTCTC 5 cut(s) 71, 785, 943, 1330, 2204
BsmFI GGGAC 1 cut(s) 1016
BsmI GAATGC 2 cut(s) 594, 1209
BsnI GGCC 5 cut(s) 588, 1528, 1764, 2171, 2332
Bso31I GGTCTC 4 cut(s) 71, 785, 1330, 2204
BsoBI CYCGRG 2 cut(s) 157, 940
Bsp120I GGGCCC 2 cut(s) 586, 2169
Bsp1286I GDGCHC 3 cut(s) 590, 841, 2173
Bsp13I TCCGGA 1 cut(s) 1870
Bsp143I GATC 4 cut(s) 967, 1361, 1959, 1977
Bsp1720I GCTNAGC 1 cut(s) 579
Bsp19I CCATGG 1 cut(s) 823
BspACI CCGC 9 cut(s) 845, 876, 892, 1028, 1083, 1255, 1525, 2151, 2285
BspANI GGCC 5 cut(s) 588, 1528, 1764, 2171, 2332
BspCNI CTCAG 6 cut(s) 25, 87, 571, 1570, 1714, 1855
BspEI TCCGGA 1 cut(s) 1870
BspFNI CGCG 2 cut(s) 506, 876
BspHI TCATGA 1 cut(s) 2083
BspLI GGNNCC 9 cut(s) 101, 342, 588, 673, 1032, 1068, 1128, 2171, 2206
BspMI ACCTGC 1 cut(s) 1351
BspPI GGATC 1 cut(s) 1967
BspT107I GGYRCC 2 cut(s) 99, 2204
BspTNI GGTCTC 4 cut(s) 71, 785, 1330, 2204
BsrDI GCAATG 2 cut(s) 314, 2254
BsrI ACTGG 3 cut(s) 573, 1970, 2026
BssECI CCNNGG 4 cut(s) 81, 823, 1825, 2311
BssMI GATC 4 cut(s) 967, 1361, 1959, 1977
BssT1I CCWWGG 2 cut(s) 823, 2311
Bst2UI CCWGG 2 cut(s) 1389, 1604
Bst4CI ACNGT 6 cut(s) 328, 530, 768, 1105, 2123, 2337
Bst6I CTCTTC 5 cut(s) 159, 858, 1352, 1434, 1737
BstBAI YACGTR 2 cut(s) 394, 486
BstC8I GCNNGC 7 cut(s) 433, 510, 754, 818, 862, 1161, 1207
BstDEI CTNAG 9 cut(s) 12, 95, 562, 579, 1313, 1578, 1701, 1780, 1863
BstDSI CCRYGG 2 cut(s) 823, 1825
BstEII GGTNACC 2 cut(s) 1218, 1927
BstF5I GGATG 5 cut(s) 496, 754, 781, 1807, 1879
BstFNI CGCG 2 cut(s) 506, 876
BstHHI GCGC 3 cut(s) 508, 950, 2129
BstKTI GATC 4 cut(s) 970, 1364, 1962, 1980
BstMAI GTCTC 5 cut(s) 71, 785, 943, 1330, 2204
BstMBI GATC 4 cut(s) 967, 1361, 1959, 1977
BstMWI GCNNNNNNNGC 5 cut(s) 223, 1088, 1097, 1460, 2265
BstNI CCWGG 2 cut(s) 1389, 1604
BstNSI RCATGY 3 cut(s) 449, 512, 1028
BstPI GGTNACC 2 cut(s) 1218, 1927
BstSCI CCNGG 4 cut(s) 81, 108, 1387, 1602
BstSLI GKGCMC 2 cut(s) 590, 2173
BstUI CGCG 2 cut(s) 506, 876
BstV1I GCAGC 8 cut(s) 238, 415, 745, 1168, 1411, 1529, 1611, 2141
BstV2I GAAGAC 1 cut(s) 657
BstX2I RGATCY 2 cut(s) 1361, 1977
BstYI RGATCY 2 cut(s) 1361, 1977
BsuRI GGCC 5 cut(s) 588, 1528, 1764, 2171, 2332
BtgI CCRYGG 2 cut(s) 823, 1825
BtsCI GGATG 5 cut(s) 496, 754, 781, 1807, 1879
BtsI GCAGTG 2 cut(s) 369, 1470
BtsIMutI CAGTG 5 cut(s) 369, 580, 625, 1470, 2333
BveI ACCTGC 1 cut(s) 1351
Cac8I GCNNGC 7 cut(s) 433, 510, 754, 818, 862, 1161, 1207
CciI TCATGA 1 cut(s) 2083
CfoI GCGC 3 cut(s) 508, 950, 2129
Cfr13I GGNCC 8 cut(s) 248, 586, 587, 1030, 1527, 1763, 2169, 2170
CseI GACGC 1 cut(s) 1883
Csp6I GTAC 3 cut(s) 100, 464, 1022
CviQI GTAC 3 cut(s) 100, 464, 1022
DdeI CTNAG 9 cut(s) 12, 95, 562, 579, 1313, 1578, 1701, 1780, 1863
DpnI GATC 4 cut(s) 969, 1363, 1961, 1979
DpnII GATC 4 cut(s) 967, 1361, 1959, 1977
DraI TTTAAA 2 cut(s) 795, 1740
DraIII CACNNNGTG 1 cut(s) 1853
EaeI YGGCCR 1 cut(s) 2330
Eam1104I CTCTTC 5 cut(s) 159, 858, 1352, 1434, 1737
EarI CTCTTC 5 cut(s) 159, 858, 1352, 1434, 1737
EciI GGCGGA 1 cut(s) 834
Eco130I CCWWGG 2 cut(s) 823, 2311
Eco24I GRGCYC 2 cut(s) 590, 2173
Eco31I GGTCTC 4 cut(s) 71, 785, 1330, 2204
Eco47I GGWCC 2 cut(s) 248, 1030
Eco57I CTGAAG 2 cut(s) 654, 839
Eco88I CYCGRG 2 cut(s) 157, 940
Eco91I GGTNACC 2 cut(s) 1218, 1927
EcoO65I GGTNACC 2 cut(s) 1218, 1927
EcoRI GAATTC 1 cut(s) 384
EcoRII CCWGG 2 cut(s) 1387, 1602
EcoT14I CCWWGG 2 cut(s) 823, 2311
EcoT22I ATGCAT 1 cut(s) 596
EcoT38I GRGCYC 2 cut(s) 590, 2173
ErhI CCWWGG 2 cut(s) 823, 2311
FaqI GGGAC 1 cut(s) 1016
FbaI TGATCA 1 cut(s) 967
FblI GTMKAC 2 cut(s) 624, 1837
FokI GGATG 5 cut(s) 503, 761, 788, 1814, 1886
FriOI GRGCYC 2 cut(s) 590, 2173
FspBI CTAG 2 cut(s) 1019, 1350
GlaI GCGC 3 cut(s) 507, 949, 2128
GsaI CCCAGC 2 cut(s) 587, 1496
GsuI CTGGAG 1 cut(s) 1675
HaeIII GGCC 5 cut(s) 588, 1528, 1764, 2171, 2332
HapII CCGG 3 cut(s) 83, 110, 1871
HgaI GACGC 1 cut(s) 1883
HhaI GCGC 3 cut(s) 508, 950, 2129
Hin6I GCGC 3 cut(s) 506, 948, 2127
HinP1I GCGC 3 cut(s) 506, 948, 2127
HincII GTYRAC 3 cut(s) 279, 625, 1838
HindII GTYRAC 3 cut(s) 279, 625, 1838
HinfI GANTC 8 cut(s) 188, 202, 287, 982, 1200, 1663, 1726, 1839
HpaII CCGG 3 cut(s) 83, 110, 1871
HphI GGTGA 3 cut(s) 614, 1621, 2174
Hpy166II GTNNAC 9 cut(s) 211, 279, 559, 625, 1829, 1838, 1856, 2146, 2252
Hpy188I TCNGA 5 cut(s) 58, 150, 298, 1579, 1884
Hpy188III TCNNGA 7 cut(s) 1569, 1871, 1898, 1984, 2066, 2084, 2275
Hpy8I GTNNAC 9 cut(s) 211, 279, 559, 625, 1829, 1838, 1856, 2146, 2252
Hpy99I CGWCG 1 cut(s) 1548
HpyAV CCTTC 8 cut(s) 653, 686, 1117, 1268, 1606, 1792, 2072, 2184
HpyCH4III ACNGT 6 cut(s) 328, 530, 768, 1105, 2123, 2337
HpyCH4IV ACGT 3 cut(s) 67, 393, 485
HpyCH4V TGCA 8 cut(s) 217, 413, 594, 752, 1163, 1810, 2222, 2259
HpyF10VI GCNNNNNNNGC 5 cut(s) 223, 1088, 1097, 1460, 2265
HpyF3I CTNAG 9 cut(s) 12, 95, 562, 579, 1313, 1578, 1701, 1780, 1863
HpySE526I ACGT 3 cut(s) 67, 393, 485
HspAI GCGC 3 cut(s) 506, 948, 2127
Kpn2I TCCGGA 1 cut(s) 1870
KpnI GGTACC 1 cut(s) 103
Ksp22I TGATCA 1 cut(s) 967
Kzo9I GATC 4 cut(s) 967, 1361, 1959, 1977
LmnI GCTCC 5 cut(s) 825, 844, 1097, 1351, 1460
Lsp1109I GCAGC 8 cut(s) 238, 415, 745, 1168, 1411, 1529, 1611, 2141
LweI GCATC 8 cut(s) 256, 298, 400, 481, 739, 1237, 1864, 1980
MaeI CTAG 2 cut(s) 1019, 1350
MaeII ACGT 3 cut(s) 67, 393, 485
MaeIII GTNAC 8 cut(s) 37, 883, 1218, 1927, 1994, 2117, 2183, 2293
MalI GATC 4 cut(s) 969, 1363, 1961, 1979
MboI GATC 4 cut(s) 967, 1361, 1959, 1977
MfeI CAATTG 1 cut(s) 1086
MflI RGATCY 2 cut(s) 1361, 1977
MhlI GDGCHC 3 cut(s) 590, 841, 2173
MluCI AATT 8 cut(s) 179, 356, 384, 414, 1052, 1086, 1572, 1818
MlyI GAGTC 2 cut(s) 1657, 1833
MmeI TCCRAC 5 cut(s) 523, 750, 1636, 1930, 2008
Mph1103I ATGCAT 1 cut(s) 596
MroI TCCGGA 1 cut(s) 1870
MseI TTAA 7 cut(s) 794, 1298, 1508, 1584, 1739, 2040, 2211
MslI CAYNNNNRTG 4 cut(s) 699, 803, 1752, 2088
MspI CCGG 3 cut(s) 83, 110, 1871
MspR9I CCNGG 4 cut(s) 83, 110, 1389, 1604
MunI CAATTG 1 cut(s) 1086
Mva1269I GAATGC 2 cut(s) 594, 1209
MvaI CCWGG 2 cut(s) 1389, 1604
MvnI CGCG 2 cut(s) 506, 876
MwoI GCNNNNNNNGC 5 cut(s) 223, 1088, 1097, 1460, 2265
NciI CCSGG 2 cut(s) 83, 110
NcoI CCATGG 1 cut(s) 823
NdeII GATC 4 cut(s) 967, 1361, 1959, 1977
NlaIV GGNNCC 9 cut(s) 101, 342, 588, 673, 1032, 1068, 1128, 2171, 2206
NmuCI GTSAC 4 cut(s) 883, 2117, 2183, 2293
NsiI ATGCAT 1 cut(s) 596
NspI RCATGY 3 cut(s) 449, 512, 1028
PaeI GCATGC 1 cut(s) 512
PagI TCATGA 1 cut(s) 2083
PaqCI CACCTGC 1 cut(s) 1351
PcsI WCGNNNNNNNCGW 1 cut(s) 197
PctI GAATGC 2 cut(s) 594, 1209
PfeI GAWTC 6 cut(s) 188, 202, 287, 982, 1200, 1726
PflFI GACNNNGTC 1 cut(s) 1833
PflMI CCANNNNNTGG 2 cut(s) 1568, 1853
PfoI TCCNGGA 1 cut(s) 108
PleI GAGTC 2 cut(s) 1657, 1833
PpsI GAGTC 2 cut(s) 1657, 1833
Ppu21I YACGTR 2 cut(s) 394, 486
Psp6I CCWGG 2 cut(s) 1387, 1602
PspEI GGTNACC 2 cut(s) 1218, 1927
PspFI CCCAGC 2 cut(s) 583, 1492
PspGI CCWGG 2 cut(s) 1387, 1602
PspN4I GGNNCC 9 cut(s) 101, 342, 588, 673, 1032, 1068, 1128, 2171, 2206
PspOMI GGGCCC 2 cut(s) 586, 2169
PspPI GGNCC 8 cut(s) 248, 586, 587, 1030, 1527, 1763, 2169, 2170
PsuI RGATCY 2 cut(s) 1361, 1977
PsyI GACNNNGTC 1 cut(s) 1833
RsaI GTAC 3 cut(s) 101, 465, 1023
RsaNI GTAC 3 cut(s) 100, 464, 1022
RseI CAYNNNNRTG 4 cut(s) 699, 803, 1752, 2088
SalI GTCGAC 2 cut(s) 623, 1836
SaqAI TTAA 7 cut(s) 794, 1298, 1508, 1584, 1739, 2040, 2211
Sau3AI GATC 4 cut(s) 967, 1361, 1959, 1977
Sau96I GGNCC 8 cut(s) 248, 586, 587, 1030, 1527, 1763, 2169, 2170
SchI GAGTC 2 cut(s) 1657, 1833
ScrFI CCNGG 4 cut(s) 83, 110, 1389, 1604
SduI GDGCHC 3 cut(s) 590, 841, 2173
SfaNI GCATC 8 cut(s) 256, 298, 400, 481, 739, 1237, 1864, 1980
SinI GGWCC 2 cut(s) 248, 1030
SmiMI CAYNNNNRTG 4 cut(s) 699, 803, 1752, 2088
SmlI CTYRAG 2 cut(s) 230, 712
SmoI CTYRAG 2 cut(s) 230, 712
SpeI ACTAGT 1 cut(s) 1018
SphI GCATGC 1 cut(s) 512
Sse9I AATT 8 cut(s) 179, 356, 384, 414, 1052, 1086, 1572, 1818
SsiI CCGC 9 cut(s) 845, 876, 892, 1028, 1083, 1255, 1525, 2151, 2285
SspI AATATT 1 cut(s) 1651
SspMI CTAG 2 cut(s) 1019, 1350
StyD4I CCNGG 4 cut(s) 81, 108, 1387, 1602
StyI CCWWGG 2 cut(s) 823, 2311
TaaI ACNGT 6 cut(s) 328, 530, 768, 1105, 2123, 2337
TaiI ACGT 3 cut(s) 70, 396, 488
TaqI TCGA 7 cut(s) 442, 624, 963, 1279, 1759, 1837, 1985
TasI AATT 8 cut(s) 179, 356, 384, 414, 1052, 1086, 1572, 1818
TatI WGTACW 2 cut(s) 463, 1021
TauI GCSGC 2 cut(s) 1085, 1528
TfiI GAWTC 6 cut(s) 188, 202, 287, 982, 1200, 1726
Tru1I TTAA 7 cut(s) 794, 1298, 1508, 1584, 1739, 2040, 2211
Tru9I TTAA 7 cut(s) 794, 1298, 1508, 1584, 1739, 2040, 2211
TscAI CASTG 5 cut(s) 369, 580, 625, 1470, 2340
TseFI GTSAC 4 cut(s) 883, 2117, 2183, 2293
TseI GCWGC 8 cut(s) 226, 428, 733, 1156, 1424, 1517, 1599, 2129
Tsp45I GTSAC 4 cut(s) 883, 2117, 2183, 2293
TspDTI ATGAA 4 cut(s) 255, 462, 1136, 1934
TspGWI ACGGA 1 cut(s) 1814
TspRI CASTG 5 cut(s) 369, 580, 625, 1470, 2340
Tth111I GACNNNGTC 1 cut(s) 1833
Van91I CCANNNNNTGG 2 cut(s) 1568, 1853
VpaK11BI GGWCC 2 cut(s) 248, 1030
XapI RAATTY 2 cut(s) 384, 1572
XceI RCATGY 3 cut(s) 449, 512, 1028
XcmI CCANNNNNNNNNTGG 1 cut(s) 580
XmiI GTMKAC 2 cut(s) 624, 1837
XspI CTAG 2 cut(s) 1019, 1350
Zsp2I ATGCAT 1 cut(s) 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.