AT3G44610

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0010356
Physical Location & Seq
Reverse (-)
16188129 .. 16192365
4237 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G44610.1

Sequence Viewer

Length: 1356 bp
ATGGAGCCATGGATTGACGAATTAACCGACGACTTACAGAGTGTAAGCTTTACATCAGCCGGAACCACCGTGAATCGAAGCACAAGCTCCGGTTCTCGCTCTTCCTCCTCCGCCGCAGCTTTAACACCAGCACCATCAGCTCACGGTTCATTCTCATCTTCGAAACTCCCTCCTTCACTCCGATCATCTCTCTCACTCTCCGATCTCAGATTCCGTCTCCGTCTCGGTTCCGGCGACATCGGCTCTGTTTTCTTAGCCGAATTCAAATCCCTAACCGCCGTAACAGAAACCACCGCCGTTAAATTACCTCTGTTAGCAGCGAAAGTTATGGATAAAAAGGAGCTCGCGAGCAGAAGCAAAGAAGGTAGAGCTAAGACGGAGAGAGAGATTCTCGAATCTCTTGATCATCCGTTTCTTCCGACGCTTTACGCCGCCATTGATTCTCCGAAATGGCTCTGTTTATTAACGGAGTTTTGTCCCGGCGGTGACCTTCACGTTCTCCGTCAAAAACAGACTCATAAACGTTTCCATGAATCCGCCGTCAGATTCTATGTATCGGAAGTGATCGTAGCGATTGAATATCTTCACATGTTGGGGATTGTGTACCGCGATTTGAAGCCTGAGAACGTGCTGGTTCGATCAGATGGTCACATCATGTTAACTGATTTTGATCTCTCCTTAAAATGTGATGAATCGACTTCCACACCACAGATAGTGCTGAACCGGAACAATCTTCCTAATGGCTCGTCTGACCAGAACGAGAACCAAGGCATGGACCACCGTCAAACCACATCATCCTCTTGCATGATCCCTAACTGTATTGTCCCTGCTGTCTCTTGCTTCCACCCGAGAATCCGAAGGCGTAAGAAGAAAACTGATCACCGTAACAACGGTCCTGAGCTTGTGGCTGAACCTGTAGATGTCCGGTCCATGTCATTCGTTGGGACGCATGAGTACTTGGCTCCTGAGATTGTTTCAGGAGAAGGACATGGTAGTGCAGTGGACTGGTGGACATTAGGGATATTCATGTTCGAGCTGTTCTACGGAACAACACCGTTCAAAGGAATGGACCACGAGCTAACCCTTGCCAATATCGTGGCTCGAGCACTCGAATTCCCGAAAGAACCAACGATTCCAAGCGCGGCCAAGGATCTGATCTCTCAGCTACTTGCCAAGGATCCTAGCCGACGGTTAGGGTCATCTCTAGGTGCAACGGCCGTGAAACGTCATCCATTTTTCCAAGGAGTGAATTGGGCATTGCTCATGTGTACTCGTCCTCCTTTTCTTCCTCCGCCTTTCCGCAAAGAACTTTTGTCAGATGACATTTGTCCGGAAACCCATGTCGACTATTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

451

Amino Acids

50.01

Weight (kDa)

6.74

Isoelectric Point (pI)

55.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 71 - 231 7.6e-18 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 75 - 239 3.8e-30 Protein kinase domain
Pkinase PF00069 310 - 413 1.6e-21 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 318 - 397 8.1e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 772
AccI GTMKAC 1 cut(s) 1344
AccII CGCG 3 cut(s) 347, 609, 1142
AccIII TCCGGA 1 cut(s) 1330
AclI AACGTT 1 cut(s) 523
AclWI GGATC 4 cut(s) 802, 1158, 1172, 1185
AcoI YGGCCR 2 cut(s) 1143, 1215
AcsI RAATTY 2 cut(s) 260, 1112
AfaI GTAC 3 cut(s) 605, 956, 1270
AfiI CCNNNNNNNGG 2 cut(s) 772, 1061
AflIII ACRYGT 1 cut(s) 588
AgsI TTSAA 4 cut(s) 265, 578, 616, 1060
Alw21I GWGCWC 2 cut(s) 345, 1108
Alw26I GTCTC 3 cut(s) 221, 227, 838
AlwI GGATC 4 cut(s) 802, 1158, 1172, 1185
Ama87I CYCGRG 2 cut(s) 847, 1101
Aor13HI TCCGGA 1 cut(s) 1330
AoxI GGCC 2 cut(s) 1143, 1215
ApeKI GCWGC 2 cut(s) 116, 317
ApoI RAATTY 2 cut(s) 260, 1112
Asp700I GAANNNNTTC 1 cut(s) 582
AspLEI GCGC 1 cut(s) 1142
AspS9I GGNCC 4 cut(s) 775, 893, 927, 1069
AsuC2I CCSGG 1 cut(s) 480
AsuHPI GGTGA 2 cut(s) 497, 872
AsuII TTCGAA 1 cut(s) 161
AvaI CYCGRG 2 cut(s) 847, 1101
AvaII GGWCC 4 cut(s) 775, 893, 927, 1069
BamHI GGATCC 1 cut(s) 1177
BanII GRGCYC 1 cut(s) 345
BauI CACGAG 1 cut(s) 1073
Bbv12I GWGCWC 2 cut(s) 345, 1108
BbvI GCAGC 2 cut(s) 128, 329
BccI CCATC 2 cut(s) 142, 638
BceAI ACGGC 5 cut(s) 263, 281, 524, 1202, 1230
BclI TGATCA 2 cut(s) 403, 877
BcnI CCSGG 1 cut(s) 480
BcoDI GTCTC 3 cut(s) 221, 227, 838
BfaI CTAG 2 cut(s) 1182, 1205
BfmI CTRYAG 1 cut(s) 915
BisI GCNGC 5 cut(s) 114, 117, 318, 432, 1143
BlsI GCNGC 5 cut(s) 115, 118, 319, 433, 1144
BmcAI AGTACT 1 cut(s) 956
Bme1390I CCNGG 1 cut(s) 480
Bme18I GGWCC 4 cut(s) 775, 893, 927, 1069
BmeT110I CYCGRG 2 cut(s) 847, 1101
BmgT120I GGNCC 4 cut(s) 775, 893, 927, 1069
BmiI GGNNCC 5 cut(s) 6, 64, 229, 963, 1179
BmrFI CCNGG 1 cut(s) 480
BoxI GACNNNNGTC 2 cut(s) 780, 1326
BplI GAGNNNNNCTC 2 cut(s) 375, 407
Bpu10I CCTNAGC 1 cut(s) 897
Bpu14I TTCGAA 1 cut(s) 161
BpuMI CCSGG 1 cut(s) 480
BsaBI GATNNNNATC 1 cut(s) 669
BsaJI CCNNGG 5 cut(s) 8, 766, 1146, 1173, 1240
BsaWI WCCGGW 4 cut(s) 89, 723, 924, 1330
BsaXI ACNNNNNCTCC 2 cut(s) 1261, 1291
Bsc4I CCNNNNNNNGG 2 cut(s) 772, 1061
Bse1I ACTGG 1 cut(s) 1010
Bse3DI GCAATG 1 cut(s) 1256
Bse8I GATNNNNATC 1 cut(s) 669
BseAI TCCGGA 1 cut(s) 1330
BseDI CCNNGG 5 cut(s) 8, 766, 1146, 1173, 1240
BseGI GGATG 3 cut(s) 406, 794, 1228
BseJI GATNNNNATC 1 cut(s) 669
BseLI CCNNNNNNNGG 2 cut(s) 772, 1061
BseMI GCAATG 1 cut(s) 1256
BseMII CTCAG 5 cut(s) 220, 612, 888, 957, 1175
BseNI ACTGG 1 cut(s) 1010
BseRI GAGGAG 1 cut(s) 97
BseX3I CGGCCG 1 cut(s) 1215
BseXI GCAGC 2 cut(s) 128, 329
BsgI GTGCAG 1 cut(s) 1017
Bsh1236I CGCG 3 cut(s) 347, 609, 1142
Bsh1285I CGRYCG 1 cut(s) 1218
BshFI GGCC 2 cut(s) 1145, 1217
BsiEI CGRYCG 1 cut(s) 1218
BsiHKAI GWGCWC 2 cut(s) 345, 1108
BsiHKCI CYCGRG 2 cut(s) 847, 1101
BsiSI CCGG 7 cut(s) 60, 90, 231, 480, 724, 925, 1331
BslFI GGGAC 3 cut(s) 462, 809, 958
BslI CCNNNNNNNGG 2 cut(s) 772, 1061
BsmAI GTCTC 3 cut(s) 221, 227, 838
BsmBI CGTCTC 2 cut(s) 221, 227
BsmFI GGGAC 3 cut(s) 462, 809, 958
BsnI GGCC 2 cut(s) 1145, 1217
BsoBI CYCGRG 2 cut(s) 847, 1101
Bsp119I TTCGAA 1 cut(s) 161
Bsp1286I GDGCHC 2 cut(s) 345, 1108
Bsp13I TCCGGA 1 cut(s) 1330
Bsp19I CCATGG 1 cut(s) 8
Bsp68I TCGCGA 1 cut(s) 347
BspANI GGCC 2 cut(s) 1145, 1217
BspCNI CTCAG 5 cut(s) 219, 613, 889, 958, 1174
BspEI TCCGGA 1 cut(s) 1330
BspFNI CGCG 3 cut(s) 347, 609, 1142
BspLI GGNNCC 5 cut(s) 6, 64, 229, 963, 1179
BspPI GGATC 4 cut(s) 802, 1158, 1172, 1185
BspQI GCTCTTC 1 cut(s) 106
BspT104I TTCGAA 1 cut(s) 161
BsrDI GCAATG 1 cut(s) 1256
BsrI ACTGG 1 cut(s) 1010
BssECI CCNNGG 5 cut(s) 8, 766, 1146, 1173, 1240
BssSI CACGAG 1 cut(s) 1073
BssT1I CCWWGG 5 cut(s) 8, 766, 1146, 1173, 1240
Bst2BI CACGAG 1 cut(s) 1073
Bst4CI ACNGT 8 cut(s) 70, 146, 782, 818, 884, 893, 1056, 1191
Bst6I CTCTTC 1 cut(s) 106
BstBI TTCGAA 1 cut(s) 161
BstC8I GCNNGC 2 cut(s) 345, 349
BstDEI CTNAG 7 cut(s) 206, 253, 372, 621, 897, 966, 1161
BstDSI CCRYGG 1 cut(s) 8
BstEII GGTNACC 1 cut(s) 485
BstF5I GGATG 3 cut(s) 406, 794, 1228
BstFNI CGCG 3 cut(s) 347, 609, 1142
BstHHI GCGC 1 cut(s) 1142
BstMAI GTCTC 3 cut(s) 221, 227, 838
BstMCI CGRYCG 1 cut(s) 1218
BstMWI GCNNNNNNNGC 2 cut(s) 137, 240
BstNSI RCATGY 1 cut(s) 592
BstPAI GACNNNNGTC 2 cut(s) 780, 1326
BstPI GGTNACC 1 cut(s) 485
BstSCI CCNGG 1 cut(s) 478
BstSFI CTRYAG 1 cut(s) 915
BstUI CGCG 3 cut(s) 347, 609, 1142
BstV1I GCAGC 2 cut(s) 128, 329
BstX2I RGATCY 2 cut(s) 1150, 1177
BstXI CCANNNNNNTGG 1 cut(s) 1096
BstYI RGATCY 2 cut(s) 1150, 1177
BstZI CGGCCG 1 cut(s) 1215
BsuRI GGCC 2 cut(s) 1145, 1217
BtgI CCRYGG 1 cut(s) 8
BtsCI GGATG 3 cut(s) 406, 794, 1228
BtsI GCAGTG 1 cut(s) 1005
BtsIMutI CAGTG 1 cut(s) 1005
BtuMI TCGCGA 1 cut(s) 347
Cac8I GCNNGC 2 cut(s) 345, 349
CfoI GCGC 1 cut(s) 1142
Cfr13I GGNCC 4 cut(s) 775, 893, 927, 1069
CseI GACGC 2 cut(s) 430, 955
Csp6I GTAC 3 cut(s) 604, 955, 1269
CviQI GTAC 3 cut(s) 604, 955, 1269
DdeI CTNAG 7 cut(s) 206, 253, 372, 621, 897, 966, 1161
EaeI YGGCCR 2 cut(s) 1143, 1215
EagI CGGCCG 1 cut(s) 1215
Eam1104I CTCTTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 106
EciI GGCGGA 3 cut(s) 100, 526, 1281
Ecl136II GAGCTC 1 cut(s) 343
EclXI CGGCCG 1 cut(s) 1215
Eco130I CCWWGG 5 cut(s) 8, 766, 1146, 1173, 1240
Eco24I GRGCYC 1 cut(s) 345
Eco47I GGWCC 4 cut(s) 775, 893, 927, 1069
Eco52I CGGCCG 1 cut(s) 1215
Eco53kI GAGCTC 1 cut(s) 343
Eco88I CYCGRG 2 cut(s) 847, 1101
Eco91I GGTNACC 1 cut(s) 485
EcoICRI GAGCTC 1 cut(s) 343
EcoO65I GGTNACC 1 cut(s) 485
EcoRI GAATTC 2 cut(s) 260, 1112
EcoT14I CCWWGG 5 cut(s) 8, 766, 1146, 1173, 1240
EcoT38I GRGCYC 1 cut(s) 345
ErhI CCWWGG 5 cut(s) 8, 766, 1146, 1173, 1240
Esp3I CGTCTC 2 cut(s) 221, 227
FaqI GGGAC 3 cut(s) 462, 809, 958
FbaI TGATCA 2 cut(s) 403, 877
FblI GTMKAC 1 cut(s) 1344
Fnu4HI GCNGC 5 cut(s) 114, 117, 318, 432, 1143
FokI GGATG 3 cut(s) 393, 781, 1215
FriOI GRGCYC 1 cut(s) 345
Fsp4HI GCNGC 5 cut(s) 114, 117, 318, 432, 1143
FspBI CTAG 2 cut(s) 1182, 1205
GlaI GCGC 1 cut(s) 1141
GluI GCNGC 5 cut(s) 114, 117, 318, 432, 1143
HaeIII GGCC 2 cut(s) 1145, 1217
HapII CCGG 7 cut(s) 60, 90, 231, 480, 724, 925, 1331
HgaI GACGC 2 cut(s) 430, 955
HhaI GCGC 1 cut(s) 1142
Hin6I GCGC 1 cut(s) 1140
HinP1I GCGC 1 cut(s) 1140
HincII GTYRAC 2 cut(s) 660, 1345
HindII GTYRAC 2 cut(s) 660, 1345
HindIII AAGCTT 1 cut(s) 46
HpaI GTTAAC 1 cut(s) 660
HpaII CCGG 7 cut(s) 60, 90, 231, 480, 724, 925, 1331
HphI GGTGA 2 cut(s) 497, 872
Hpy166II GTNNAC 6 cut(s) 604, 660, 1003, 1011, 1269, 1345
Hpy188III TCNNGA 8 cut(s) 346, 392, 401, 896, 965, 978, 1117, 1331
Hpy8I GTNNAC 6 cut(s) 604, 660, 1003, 1011, 1269, 1345
Hpy99I CGWCG 3 cut(s) 32, 424, 1191
HpyAV CCTTC 5 cut(s) 183, 356, 500, 852, 977
HpyCH4III ACNGT 8 cut(s) 70, 146, 782, 818, 884, 893, 1056, 1191
HpyCH4IV ACGT 4 cut(s) 495, 523, 627, 1225
HpyCH4V TGCA 3 cut(s) 804, 998, 1211
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 240
HpyF3I CTNAG 7 cut(s) 206, 253, 372, 621, 897, 966, 1161
HpySE526I ACGT 4 cut(s) 495, 523, 627, 1225
HspAI GCGC 1 cut(s) 1140
Kpn2I TCCGGA 1 cut(s) 1330
Ksp22I TGATCA 2 cut(s) 403, 877
KspAI GTTAAC 1 cut(s) 660
LguI GCTCTTC 1 cut(s) 106
LmnI GCTCC 4 cut(s) 4, 92, 340, 967
Lsp1109I GCAGC 2 cut(s) 128, 329
MaeI CTAG 2 cut(s) 1182, 1205
MaeII ACGT 4 cut(s) 495, 523, 627, 1225
MaeIII GTNAC 4 cut(s) 280, 485, 647, 884
MboII GAAGA 7 cut(s) 93, 150, 407, 575, 725, 880, 1277
MflI RGATCY 2 cut(s) 1150, 1177
MhlI GDGCHC 2 cut(s) 345, 1108
MluCI AATT 5 cut(s) 20, 260, 302, 1112, 1249
MlyI GAGTC 1 cut(s) 508
MmeI TCCRAC 1 cut(s) 443
MnlI CCTC 7 cut(s) 115, 118, 180, 318, 808, 1287, 1299
MroI TCCGGA 1 cut(s) 1330
MroXI GAANNNNTTC 1 cut(s) 582
MseI TTAA 7 cut(s) 23, 122, 300, 464, 659, 680, 1354
MslI CAYNNNNRTG 1 cut(s) 993
MspI CCGG 7 cut(s) 60, 90, 231, 480, 724, 925, 1331
MspR9I CCNGG 1 cut(s) 480
MvnI CGCG 3 cut(s) 347, 609, 1142
MwoI GCNNNNNNNGC 2 cut(s) 137, 240
NciI CCSGG 1 cut(s) 480
NcoI CCATGG 1 cut(s) 8
NlaIV GGNNCC 5 cut(s) 6, 64, 229, 963, 1179
NmuCI GTSAC 2 cut(s) 485, 647
NruI TCGCGA 1 cut(s) 347
NspI RCATGY 1 cut(s) 592
NspV TTCGAA 1 cut(s) 161
PaeR7I CTCGAG 1 cut(s) 1101
PciI ACATGT 1 cut(s) 588
PciSI GCTCTTC 1 cut(s) 106
PcsI WCGNNNNNNNCGW 2 cut(s) 24, 231
PdmI GAANNNNTTC 1 cut(s) 582
PflMI CCANNNNNTGG 1 cut(s) 772
PkrI GCNGC 5 cut(s) 115, 118, 319, 433, 1144
PleI GAGTC 1 cut(s) 508
PpsI GAGTC 1 cut(s) 508
PscI ACATGT 1 cut(s) 588
PshAI GACNNNNGTC 2 cut(s) 780, 1326
Psp124BI GAGCTC 1 cut(s) 345
Psp1406I AACGTT 1 cut(s) 523
PspEI GGTNACC 1 cut(s) 485
PspN4I GGNNCC 5 cut(s) 6, 64, 229, 963, 1179
PspPI GGNCC 4 cut(s) 775, 893, 927, 1069
PspXI VCTCGAGB 1 cut(s) 1101
PsuI RGATCY 2 cut(s) 1150, 1177
RruI TCGCGA 1 cut(s) 347
RsaI GTAC 3 cut(s) 605, 956, 1270
RsaNI GTAC 3 cut(s) 604, 955, 1269
RseI CAYNNNNRTG 1 cut(s) 993
SacI GAGCTC 1 cut(s) 345
SalI GTCGAC 1 cut(s) 1343
SapI GCTCTTC 1 cut(s) 106
SaqAI TTAA 7 cut(s) 23, 122, 300, 464, 659, 680, 1354
SatI GCNGC 5 cut(s) 114, 117, 318, 432, 1143
Sau96I GGNCC 4 cut(s) 775, 893, 927, 1069
ScaI AGTACT 1 cut(s) 956
SchI GAGTC 1 cut(s) 508
ScrFI CCNGG 1 cut(s) 480
SduI GDGCHC 2 cut(s) 345, 1108
SfcI CTRYAG 1 cut(s) 915
Sfr274I CTCGAG 1 cut(s) 1101
SfuI TTCGAA 1 cut(s) 161
SinI GGWCC 4 cut(s) 775, 893, 927, 1069
SlaI CTCGAG 1 cut(s) 1101
SmiMI CAYNNNNRTG 1 cut(s) 993
SmlI CTYRAG 1 cut(s) 1101
SmoI CTYRAG 1 cut(s) 1101
Sse9I AATT 5 cut(s) 20, 260, 302, 1112, 1249
SspMI CTAG 2 cut(s) 1182, 1205
SstI GAGCTC 1 cut(s) 345
StyD4I CCNGG 1 cut(s) 478
StyI CCWWGG 5 cut(s) 8, 766, 1146, 1173, 1240
TaaI ACNGT 8 cut(s) 70, 146, 782, 818, 884, 893, 1056, 1191
TaiI ACGT 4 cut(s) 498, 526, 630, 1228
TaqI TCGA 9 cut(s) 76, 161, 393, 637, 695, 1032, 1102, 1110, 1344
TasI AATT 5 cut(s) 20, 260, 302, 1112, 1249
TatI WGTACW 2 cut(s) 954, 1268
TauI GCSGC 3 cut(s) 116, 434, 1145
Tru1I TTAA 7 cut(s) 23, 122, 300, 464, 659, 680, 1354
Tru9I TTAA 7 cut(s) 23, 122, 300, 464, 659, 680, 1354
TscAI CASTG 1 cut(s) 1005
TseFI GTSAC 2 cut(s) 485, 647
TseI GCWGC 2 cut(s) 116, 317
Tsp45I GTSAC 2 cut(s) 485, 647
TspDTI ATGAA 4 cut(s) 138, 546, 705, 1015
TspGWI ACGGA 7 cut(s) 203, 209, 392, 399, 482, 491, 1059
TspRI CASTG 1 cut(s) 1005
Van91I CCANNNNNTGG 1 cut(s) 772
VpaK11BI GGWCC 4 cut(s) 775, 893, 927, 1069
XapI RAATTY 2 cut(s) 260, 1112
XceI RCATGY 1 cut(s) 592
XhoI CTCGAG 1 cut(s) 1101
XmiI GTMKAC 1 cut(s) 1344
XmnI GAANNNNTTC 1 cut(s) 582
XspI CTAG 2 cut(s) 1182, 1205
ZrmI AGTACT 1 cut(s) 956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.