Rorug05G0206900
ERF Family

Peptidylprolyl isomerase domain and WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000591
Physical Location & Seq
Forward (+)
20623720 .. 20627669
3950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0206900.1

Sequence Viewer

Length: 1710 bp
ATGGCTGCCGATCCGGCACAGTTAAGTTCCCAACTGGCTGAAGCAACTTTGAACGAATCTGTCTCTGCTCTGAAAGCAGAATTTTCTGACAGAGTTCCCATCAGATCCATAATATCACGAACCGATGGGGGGTCTGGGTTTGCCGGGCAGCATGTCCGGGTTGGTGGTTGGGTGAAGACGGGCAGGAAGGCAGACAAGGATGCATTTGCTTTTCTGGAACTTAATGATGGATCATGCCCTGGCAACTTACAGGTGATTGTGGAAGCAGACAAGGGTGACCTTGGGCAGCTTGTGCCAACCGGTACATGTGTGGTTGTGGATGGCGTGCTTAAGCTGCCCCCAGCTGGGGCCAAGCAGAAGGTGGAGCTTAGAGTTGAGAAGGTGGTCCATTTAGGTCCAGTTGACCCTGCTAAATATCCGTTGCCCAAGACCAAGCTCACCCTTGAGTTTTTGAGGGACGTAGTTCATCTCCGTTCCAGAACTAACACCATCTCTGCAGTTGCTCGCATCAGAAATGCCCTGGCATATGCAACTCATACATTTTTCCAAAAGCATGGCTTCCTTTATGTGCACACTCCAATTATCACTACCAGTGATTGTGAGGGTGCTGGTGAGATGTTCCAAGTCACAACATTGATTAGCGAAGGTGAAAGGTTGGAGAGGGAGCTGATTAAGAACCCTCCCCCGTCTGAAGCAGACCTAGAAGCTGCCAAGCTAATCATCAAGGAAAAAGGAGATGCTGTTTCACAGCTGAAATCTGCTAAAGCAAGTAAGGAGGAGATTGGCGCTGCTGTCGCTGAACTTAAAAGGGCGAAGGAGAATGATTTGAAGCTGGAGGAGAGATCAAAGCTTCAGCCAGGAATCCCCAAAAAGGATGGGAAGATTGACTATACACAAGATTTCTTTGCCCGTCAAGCTTTTTTGACCGTTTCTGGCCAACTCCAAGTGGAATCTTATGCATGTGCTCTTAGTAGCGTGTATACATTTGGGCCTACTTTTCGTGCTGAGAATTCACACACTTCACGGCATTTGGCAGAATTCTGGATGGTGGAGCCTGAATTAGCATTTGCAGAGCTCAAGGATGACATGAACTGTGCAGAGGCGTATGTCAAATTCTTGTGTCAGTGGTTACTTGACAACTGCTATGACGATATGGAGTTTATTTCTCGGCAATTTGATAAAACTTGCATAGACCGTCTAAAGATGGTTGCATCCACACCGTTTGAACGGATTACATATACAGAAGCTGTGGAGCTGCTAATCGATGCTGTGAAAAATGGCAAGAAGTTTGAGAATCATGTAGAATGGGGGATTGACTTAGCATCTGAACATGAAAGATTCTTAACAGAGGTGAAATTTCAGAAGCCTGTTATTGTGTACAATTACCCAAAAGGGATCAAAGCTTTCTACATGAGACTCAATGATGATAACAAAACAGTGGCTGCTATGGATGTCCTTGTACCAAAGGTGGGAGAGTTGATTGGGGGTAGCCAAAGGGAAGAACGCTATGATGTGATTCATAGCAGGATTGCAGAGATGGGTCTGCCTATTGAGCCGTACGAGTGGTATCTTGATTTGCGCCGCTTTGGAACTGTCAAACATGCCGGTTTTGGTTTAGGGTTTGAACGGATGCTTTTGTTTGCCACAGGCCTTGACAATATCAGAGATGTTATTCCATTCCCTAGATATCCTGGAAGAGCAGATCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000413 GO:0003002 GO:0003006 GO:0003674 GO:0003682 GO:0003755 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009933 GO:0009965 GO:0009987 GO:0010015 GO:0010016 GO:0010051 GO:0010073 GO:0010075 GO:0010082 GO:0010305 GO:0010338 GO:0010358 GO:0016018 GO:0016604 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031056 GO:0031060 GO:0031323 GO:0031399 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033218 GO:0036211 GO:0040008 GO:0042277 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048442 GO:0048443 GO:0048444 GO:0048447 GO:0048449 GO:0048453 GO:0048464 GO:0048466 GO:0048467 GO:0048507 GO:0048509 GO:0048532 GO:0048580 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902275 GO:1902494 GO:1905392 GO:1905393 GO:1990904 GO:2000026 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase WD40

Protein Analysis

569

Amino Acids

63.56

Weight (kDa)

5.95

Isoelectric Point (pI)

31.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA_anti-codon PF01336 52 - 129 2.2e-08 OB-fold nucleic acid binding domain
tRNA-synt_2 PF00152 155 - 212 3.9e-07 tRNA synthetases class II (D, K and N)
WHEP-TRS PF00458 241 - 277 2.1e-06 WHEP-TRS domain
tRNA-synt_2 PF00152 300 - 562 1.6e-50 tRNA synthetases class II (D, K and N)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000591)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03566
fragaria_vesca FvH4_2g12622 FvH4_2g12642 FvH4_2g13902 FvH4_3g05011 FvH4_3g18961 FvH4_3g31940 FvH4_4g08421 FvH4_4g21351 FvH4_5g28071 FvH4_5g34871 FvH4_6g21812 FvH4_6g30441 FvH4_6g33631
rosa_chinensis RchiOBHm_Chr1g0320221 RchiOBHm_Chr1g0356521 RchiOBHm_Chr4g0389021 RchiOBHm_Chr5g0020651 RchiOBHm_Chr5g0027511
rosa_laevigata RLG00000002966 RLG00000019504
rosa_multiflora Rmu_co7963640.1_g000001 Rmu_co7988458.1_g000001 Rmu_co8109512.1_g000001 Rmu_co8136160.1_g000001 Rmu_co8253655.1_g000001 Rmu_sc0000388.1_g000040 Rmu_sc0000540.1_g000056 Rmu_sc0000574.1_g000013 Rmu_sc0000623.1_g000001 Rmu_sc0000795.1_g000005 Rmu_sc0000795.1_g000006 Rmu_sc0001063.1_g000001 Rmu_sc0002116.1_g000001 Rmu_sc0002192.1_g000012 Rmu_sc0002640.1_g000015 Rmu_sc0003337.1_g000039 Rmu_sc0004298.1_g000003 Rmu_sc0004771.1_g000001 Rmu_sc0006119.1_g000010 Rmu_sc0006633.1_g000007 Rmu_sc0007025.1_g000016 Rmu_sc0007221.1_g000002 Rmu_sc0007222.1_g000002 Rmu_sc0007806.1_g000016 Rmu_sc0008241.1_g000018 Rmu_sc0008348.1_g000001 Rmu_sc0009034.1_g000001 Rmu_sc0009955.1_g000004 Rmu_sc0018325.1_g000009 Rmu_sc0028328.1_g000002 Rmu_sc0030178.1_g000001 Rmu_sc0034381.1_g000001 Rmu_sc0041085.1_g000001 Rmu_sc0041085.1_g000002
rosa_roxburghii Rroxscaffold_3G00233230 Rroxscaffold_7G00193120 Rroxscaffold_7G00194820
rosa_rugosa Rorug01G0017000 Rorug01G0036400 Rorug01G0062600 Rorug01G0118500 Rorug02G0351500 Rorug02G0497600 Rorug03G0233200 Rorug03G0279500 Rorug03G0347600 Rorug04G0077100 Rorug04G0077200 Rorug04G0210900 Rorug05G0206900 Rorug07G0202900 Rorug07G0334000
rosa_samantha Rh2CG195700 Rh4DG035800
rosa_wichuraiana Rw0G005080 Rw0G013600 Rw2G020080 Rw2G024380 Rw5G002230 Rw5G036790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 980
AciI CCGC 1 cut(s) 1582
AclWI GGATC 4 cut(s) 5, 99, 238, 1403
AcoI YGGCCR 1 cut(s) 934
AcsI RAATTY 5 cut(s) 80, 1009, 1037, 1112, 1355
AcuI CTGAAG 3 cut(s) 60, 711, 836
AfaI GTAC 4 cut(s) 304, 1379, 1461, 1559
AfiI CCNNNNNNNGG 6 cut(s) 129, 344, 345, 346, 871, 1469
AflII CTTAAG 1 cut(s) 329
AflIII ACRYGT 1 cut(s) 305
AgeI ACCGGT 1 cut(s) 299
AgsI TTSAA 4 cut(s) 52, 829, 1226, 1625
AjnI CCWGG 4 cut(s) 238, 519, 856, 1690
Alw21I GWGCWC 3 cut(s) 573, 967, 1077
Alw26I GTCTC 2 cut(s) 67, 1408
Alw44I GTGCAC 1 cut(s) 569
AlwI GGATC 4 cut(s) 5, 99, 238, 1403
AlwNI CAGNNNCTG 2 cut(s) 1247, 1442
AoxI GGCC 4 cut(s) 348, 934, 989, 1648
ApaLI GTGCAC 1 cut(s) 569
ApeKI GCWGC 8 cut(s) 5, 148, 286, 334, 707, 788, 1255, 1442
ApoI RAATTY 5 cut(s) 80, 1009, 1037, 1112, 1355
AsiGI ACCGGT 1 cut(s) 299
AspLEI GCGC 2 cut(s) 788, 1581
AspS9I GGNCC 4 cut(s) 348, 385, 395, 989
AsuC2I CCSGG 2 cut(s) 145, 158
AsuHPI GGTGA 7 cut(s) 184, 265, 287, 430, 623, 659, 1363
AvaII GGWCC 2 cut(s) 385, 395
BaeGI GKGCMC 1 cut(s) 573
BaeI ACNNNNGTAYC 2 cut(s) 294, 327
BalI TGGCCA 1 cut(s) 936
BanII GRGCYC 1 cut(s) 1077
BbsI GAAGAC 1 cut(s) 182
Bbv12I GWGCWC 3 cut(s) 573, 967, 1077
BbvI GCAGC 7 cut(s) 160, 298, 321, 694, 775, 1242, 1429
BccI CCATC 9 cut(s) 107, 119, 221, 314, 497, 869, 1039, 1198, 1531
BceAI ACGGC 2 cut(s) 1040, 1540
BciT130I CCWGG 4 cut(s) 240, 521, 858, 1692
BcnI CCSGG 2 cut(s) 145, 158
BcoDI GTCTC 2 cut(s) 67, 1408
BfaI CTAG 2 cut(s) 701, 1683
BfmI CTRYAG 1 cut(s) 495
BfoI RGCGCY 1 cut(s) 789
BfrI CTTAAG 1 cut(s) 329
BglI GCCNNNNNGGC 1 cut(s) 14
BglII AGATCT 1 cut(s) 1702
BisI GCNGC 9 cut(s) 6, 149, 287, 335, 708, 789, 1256, 1443, 1582
BlsI GCNGC 9 cut(s) 7, 150, 288, 336, 709, 790, 1257, 1444, 1583
Bme1390I CCNGG 6 cut(s) 145, 158, 240, 521, 858, 1692
Bme18I GGWCC 2 cut(s) 385, 395
BmgT120I GGNCC 4 cut(s) 348, 385, 395, 989
BmiI GGNNCC 2 cut(s) 349, 1053
BmrFI CCNGG 6 cut(s) 145, 158, 240, 521, 858, 1692
BmsI GCATC 7 cut(s) 190, 516, 727, 1220, 1255, 1331, 1620
BpiI GAAGAC 1 cut(s) 182
BpmI CTGGAG 1 cut(s) 854
BpuEI CTTGAG 2 cut(s) 464, 1061
BpuMI CCSGG 2 cut(s) 145, 158
Bsa29I ATCGAT 1 cut(s) 1263
BsaJI CCNNGG 3 cut(s) 238, 280, 519
BsaWI WCCGGW 1 cut(s) 299
BsaXI ACNNNNNCTCC 2 cut(s) 726, 756
Bsc4I CCNNNNNNNGG 6 cut(s) 129, 344, 345, 346, 871, 1469
Bse118I RCCGGY 2 cut(s) 299, 1604
Bse1I ACTGG 3 cut(s) 39, 398, 591
BseBI CCWGG 4 cut(s) 240, 521, 858, 1692
BseCI ATCGAT 1 cut(s) 1263
BseDI CCNNGG 3 cut(s) 238, 280, 519
BseGI GGATG 8 cut(s) 205, 325, 880, 1050, 1087, 1211, 1456, 1635
BseLI CCNNNNNNNGG 6 cut(s) 129, 344, 345, 346, 871, 1469
BseMII CTCAG 1 cut(s) 996
BseNI ACTGG 3 cut(s) 39, 398, 591
BseRI GAGGAG 2 cut(s) 791, 851
BseSI GKGCMC 1 cut(s) 573
BseXI GCAGC 7 cut(s) 160, 298, 321, 694, 775, 1242, 1429
BseYI CCCAGC 2 cut(s) 340, 344
BsgI GTGCAG 1 cut(s) 1116
BshFI GGCC 4 cut(s) 350, 936, 991, 1650
BshTI ACCGGT 1 cut(s) 299
BshVI ATCGAT 1 cut(s) 1263
BsiHKAI GWGCWC 3 cut(s) 573, 967, 1077
BsiSI CCGG 5 cut(s) 14, 144, 157, 300, 1605
BsiWI CGTACG 1 cut(s) 1557
BslFI GGGAC 1 cut(s) 470
BslI CCNNNNNNNGG 6 cut(s) 129, 344, 345, 346, 871, 1469
BsmAI GTCTC 2 cut(s) 67, 1408
BsmFI GGGAC 1 cut(s) 470
BsnI GGCC 4 cut(s) 350, 936, 991, 1650
Bsp1286I GDGCHC 3 cut(s) 573, 967, 1077
Bsp1407I TGTACA 1 cut(s) 1377
Bsp143I GATC 6 cut(s) 10, 104, 230, 842, 1395, 1702
BspACI CCGC 1 cut(s) 1582
BspANI GGCC 4 cut(s) 350, 936, 991, 1650
BspCNI CTCAG 1 cut(s) 997
BspDI ATCGAT 1 cut(s) 1263
BspLI GGNNCC 2 cut(s) 349, 1053
BspMAI CTGCAG 1 cut(s) 499
BspPI GGATC 4 cut(s) 5, 99, 238, 1403
BspQI GCTCTTC 1 cut(s) 1690
BspTI CTTAAG 1 cut(s) 329
BsrFI RCCGGY 2 cut(s) 299, 1604
BsrGI TGTACA 1 cut(s) 1377
BsrI ACTGG 3 cut(s) 39, 398, 591
BssAI RCCGGY 2 cut(s) 299, 1604
BssECI CCNNGG 3 cut(s) 238, 280, 519
BssMI GATC 6 cut(s) 10, 104, 230, 842, 1395, 1702
BssNAI GTATAC 1 cut(s) 981
BssT1I CCWWGG 1 cut(s) 280
Bst1107I GTATAC 1 cut(s) 981
Bst2UI CCWGG 4 cut(s) 240, 521, 858, 1692
Bst4CI ACNGT 7 cut(s) 21, 928, 1094, 1196, 1221, 1438, 1594
Bst6I CTCTTC 1 cut(s) 1690
BstAFI CTTAAG 1 cut(s) 329
BstAPI GCANNNNNTGC 1 cut(s) 292
BstAUI TGTACA 1 cut(s) 1377
BstC8I GCNNGC 2 cut(s) 326, 505
BstDEI CTNAG 4 cut(s) 368, 968, 1005, 1318
BstEII GGTNACC 1 cut(s) 275
BstF5I GGATG 8 cut(s) 205, 325, 880, 1050, 1087, 1211, 1456, 1635
BstH2I RGCGCY 1 cut(s) 789
BstHHI GCGC 2 cut(s) 788, 1581
BstKTI GATC 6 cut(s) 13, 107, 233, 845, 1398, 1705
BstMAI GTCTC 2 cut(s) 67, 1408
BstMBI GATC 6 cut(s) 10, 104, 230, 842, 1395, 1702
BstMWI GCNNNNNNNGC 7 cut(s) 14, 74, 292, 334, 794, 914, 1552
BstNI CCWGG 4 cut(s) 240, 521, 858, 1692
BstNSI RCATGY 4 cut(s) 155, 309, 963, 1604
BstPI GGTNACC 1 cut(s) 275
BstSCI CCNGG 6 cut(s) 143, 156, 238, 519, 856, 1690
BstSFI CTRYAG 1 cut(s) 495
BstSLI GKGCMC 1 cut(s) 573
BstV1I GCAGC 7 cut(s) 160, 298, 321, 694, 775, 1242, 1429
BstV2I GAAGAC 1 cut(s) 182
BstX2I RGATCY 2 cut(s) 104, 1702
BstXI CCANNNNNNTGG 1 cut(s) 554
BstYI RGATCY 2 cut(s) 104, 1702
BstZ17I GTATAC 1 cut(s) 981
Bsu15I ATCGAT 1 cut(s) 1263
BsuRI GGCC 4 cut(s) 350, 936, 991, 1650
BsuTUI ATCGAT 1 cut(s) 1263
BtsCI GGATG 8 cut(s) 205, 325, 880, 1050, 1087, 1211, 1456, 1635
BtsIMutI CAGTG 3 cut(s) 598, 1130, 1443
Cac8I GCNNGC 2 cut(s) 326, 505
CaiI CAGNNNCTG 2 cut(s) 1247, 1442
CfoI GCGC 2 cut(s) 788, 1581
Cfr10I RCCGGY 2 cut(s) 299, 1604
Cfr13I GGNCC 4 cut(s) 348, 385, 395, 989
ClaI ATCGAT 1 cut(s) 1263
Csp6I GTAC 4 cut(s) 303, 1378, 1460, 1558
CspAI ACCGGT 1 cut(s) 299
CspCI CAANNNNNGTGG 4 cut(s) 1204, 1239, 1633, 1668
CviQI GTAC 4 cut(s) 303, 1378, 1460, 1558
DdeI CTNAG 4 cut(s) 368, 968, 1005, 1318
DpnI GATC 6 cut(s) 12, 106, 232, 844, 1397, 1704
DpnII GATC 6 cut(s) 10, 104, 230, 842, 1395, 1702
EaeI YGGCCR 1 cut(s) 934
Eam1104I CTCTTC 1 cut(s) 1690
EarI CTCTTC 1 cut(s) 1690
Ecl136II GAGCTC 1 cut(s) 1075
Eco130I CCWWGG 1 cut(s) 280
Eco147I AGGCCT 1 cut(s) 1650
Eco24I GRGCYC 1 cut(s) 1077
Eco32I GATATC 1 cut(s) 1688
Eco47I GGWCC 2 cut(s) 385, 395
Eco53kI GAGCTC 1 cut(s) 1075
Eco57I CTGAAG 3 cut(s) 60, 711, 836
Eco91I GGTNACC 1 cut(s) 275
EcoICRI GAGCTC 1 cut(s) 1075
EcoO65I GGTNACC 1 cut(s) 275
EcoRI GAATTC 2 cut(s) 1009, 1037
EcoRII CCWGG 4 cut(s) 238, 519, 856, 1690
EcoRV GATATC 1 cut(s) 1688
EcoT14I CCWWGG 1 cut(s) 280
EcoT22I ATGCAT 2 cut(s) 205, 961
EcoT38I GRGCYC 1 cut(s) 1077
ErhI CCWWGG 1 cut(s) 280
FalI AAGNNNNNCTT 2 cut(s) 542, 574
FaqI GGGAC 1 cut(s) 470
FauNDI CATATG 1 cut(s) 526
FblI GTMKAC 1 cut(s) 980
Fnu4HI GCNGC 9 cut(s) 6, 149, 287, 335, 708, 789, 1256, 1443, 1582
FokI GGATG 8 cut(s) 212, 332, 887, 1057, 1094, 1198, 1463, 1642
FriOI GRGCYC 1 cut(s) 1077
Fsp4HI GCNGC 9 cut(s) 6, 149, 287, 335, 708, 789, 1256, 1443, 1582
FspBI CTAG 2 cut(s) 701, 1683
GlaI GCGC 2 cut(s) 787, 1580
GluI GCNGC 9 cut(s) 6, 149, 287, 335, 708, 789, 1256, 1443, 1582
GsaI CCCAGC 2 cut(s) 344, 348
GsuI CTGGAG 1 cut(s) 854
HaeII RGCGCY 1 cut(s) 789
HaeIII GGCC 4 cut(s) 350, 936, 991, 1650
HapII CCGG 5 cut(s) 14, 144, 157, 300, 1605
HhaI GCGC 2 cut(s) 788, 1581
Hin6I GCGC 2 cut(s) 786, 1579
HinP1I GCGC 2 cut(s) 786, 1579
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 3 cut(s) 848, 915, 1401
HinfI GANTC 7 cut(s) 56, 861, 950, 1294, 1338, 1416, 1516
HpaII CCGG 5 cut(s) 14, 144, 157, 300, 1605
HphI GGTGA 7 cut(s) 184, 265, 287, 430, 623, 659, 1363
Hpy166II GTNNAC 4 cut(s) 403, 571, 981, 1378
Hpy188I TCNGA 8 cut(s) 72, 88, 104, 512, 691, 1327, 1362, 1664
Hpy188III TCNNGA 5 cut(s) 117, 215, 477, 1042, 1571
Hpy8I GTNNAC 4 cut(s) 403, 571, 981, 1378
HpyAV CCTTC 5 cut(s) 181, 352, 373, 638, 808
HpyCH4III ACNGT 7 cut(s) 21, 928, 1094, 1196, 1221, 1438, 1594
HpyCH4IV ACGT 1 cut(s) 459
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 74, 292, 334, 794, 914, 1552
HpyF3I CTNAG 4 cut(s) 368, 968, 1005, 1318
HpySE526I ACGT 1 cut(s) 459
HspAI GCGC 2 cut(s) 786, 1579
Kzo9I GATC 6 cut(s) 10, 104, 230, 842, 1395, 1702
LguI GCTCTTC 1 cut(s) 1690
LmnI GCTCC 4 cut(s) 364, 664, 1051, 1252
Lsp1109I GCAGC 7 cut(s) 160, 298, 321, 694, 775, 1242, 1429
LweI GCATC 7 cut(s) 190, 516, 727, 1220, 1255, 1331, 1620
MaeI CTAG 2 cut(s) 701, 1683
MaeII ACGT 1 cut(s) 459
MaeIII GTNAC 3 cut(s) 275, 625, 1128
MalI GATC 6 cut(s) 12, 106, 232, 844, 1397, 1704
MboI GATC 6 cut(s) 10, 104, 230, 842, 1395, 1702
MboII GAAGA 4 cut(s) 187, 892, 1511, 1707
MflI RGATCY 2 cut(s) 104, 1702
MhlI GDGCHC 3 cut(s) 573, 967, 1077
MlsI TGGCCA 1 cut(s) 936
MluCI AATT 9 cut(s) 80, 579, 1009, 1037, 1058, 1112, 1172, 1355, 1381
MluNI TGGCCA 1 cut(s) 936
MlyI GAGTC 1 cut(s) 1410
MmeI TCCRAC 1 cut(s) 636
MnlI CCTC 8 cut(s) 447, 595, 654, 690, 769, 829, 1093, 1342
Mox20I TGGCCA 1 cut(s) 936
Mph1103I ATGCAT 2 cut(s) 205, 961
MscI TGGCCA 1 cut(s) 936
MseI TTAA 7 cut(s) 23, 222, 330, 672, 804, 1343, 1708
Msp20I TGGCCA 1 cut(s) 936
MspA1I CMGCKG 2 cut(s) 344, 751
MspCI CTTAAG 1 cut(s) 329
MspI CCGG 5 cut(s) 14, 144, 157, 300, 1605
MspR9I CCNGG 6 cut(s) 145, 158, 240, 521, 858, 1692
MvaI CCWGG 4 cut(s) 240, 521, 858, 1692
MwoI GCNNNNNNNGC 7 cut(s) 14, 74, 292, 334, 794, 914, 1552
NciI CCSGG 2 cut(s) 145, 158
NdeI CATATG 1 cut(s) 526
NdeII GATC 6 cut(s) 10, 104, 230, 842, 1395, 1702
NlaIV GGNNCC 2 cut(s) 349, 1053
NmeAIII GCCGAG 1 cut(s) 1147
NmuCI GTSAC 2 cut(s) 275, 625
NsiI ATGCAT 2 cut(s) 205, 961
NspI RCATGY 4 cut(s) 155, 309, 963, 1604
PceI AGGCCT 1 cut(s) 1650
PciI ACATGT 1 cut(s) 305
PciSI GCTCTTC 1 cut(s) 1690
PfeI GAWTC 6 cut(s) 56, 861, 950, 1294, 1338, 1516
Pfl23II CGTACG 1 cut(s) 1557
PfoI TCCNGGA 1 cut(s) 1690
PinAI ACCGGT 1 cut(s) 299
PkrI GCNGC 9 cut(s) 7, 150, 288, 336, 709, 790, 1257, 1444, 1583
PleI GAGTC 1 cut(s) 1410
PpsI GAGTC 1 cut(s) 1410
PscI ACATGT 1 cut(s) 305
Psp124BI GAGCTC 1 cut(s) 1077
Psp6I CCWGG 4 cut(s) 238, 519, 856, 1690
PspEI GGTNACC 1 cut(s) 275
PspFI CCCAGC 2 cut(s) 340, 344
PspGI CCWGG 4 cut(s) 238, 519, 856, 1690
PspLI CGTACG 1 cut(s) 1557
PspN4I GGNNCC 2 cut(s) 349, 1053
PspPI GGNCC 4 cut(s) 348, 385, 395, 989
PstI CTGCAG 1 cut(s) 499
PstNI CAGNNNCTG 2 cut(s) 1247, 1442
PsuI RGATCY 2 cut(s) 104, 1702
PvuII CAGCTG 2 cut(s) 344, 751
RsaI GTAC 4 cut(s) 304, 1379, 1461, 1559
RsaNI GTAC 4 cut(s) 303, 1378, 1460, 1558
SacI GAGCTC 1 cut(s) 1077
SapI GCTCTTC 1 cut(s) 1690
SaqAI TTAA 7 cut(s) 23, 222, 330, 672, 804, 1343, 1708
SatI GCNGC 9 cut(s) 6, 149, 287, 335, 708, 789, 1256, 1443, 1582
Sau3AI GATC 6 cut(s) 10, 104, 230, 842, 1395, 1702
Sau96I GGNCC 4 cut(s) 348, 385, 395, 989
SchI GAGTC 1 cut(s) 1410
ScrFI CCNGG 6 cut(s) 145, 158, 240, 521, 858, 1692
SduI GDGCHC 3 cut(s) 573, 967, 1077
SfaNI GCATC 7 cut(s) 190, 516, 727, 1220, 1255, 1331, 1620
SfcI CTRYAG 1 cut(s) 495
SinI GGWCC 2 cut(s) 385, 395
SmlI CTYRAG 3 cut(s) 329, 443, 1076
SmoI CTYRAG 3 cut(s) 329, 443, 1076
Sse9I AATT 9 cut(s) 80, 579, 1009, 1037, 1058, 1112, 1172, 1355, 1381
SseBI AGGCCT 1 cut(s) 1650
SsiI CCGC 1 cut(s) 1582
SspMI CTAG 2 cut(s) 701, 1683
SstI GAGCTC 1 cut(s) 1077
StuI AGGCCT 1 cut(s) 1650
StyD4I CCNGG 6 cut(s) 143, 156, 238, 519, 856, 1690
StyI CCWWGG 1 cut(s) 280
TaaI ACNGT 7 cut(s) 21, 928, 1094, 1196, 1221, 1438, 1594
TaiI ACGT 1 cut(s) 462
TaqI TCGA 1 cut(s) 1263
TasI AATT 9 cut(s) 80, 579, 1009, 1037, 1058, 1112, 1172, 1355, 1381
TatI WGTACW 1 cut(s) 1377
TauI GCSGC 1 cut(s) 1584
TfiI GAWTC 6 cut(s) 56, 861, 950, 1294, 1338, 1516
Tru1I TTAA 7 cut(s) 23, 222, 330, 672, 804, 1343, 1708
Tru9I TTAA 7 cut(s) 23, 222, 330, 672, 804, 1343, 1708
TscAI CASTG 3 cut(s) 598, 1130, 1443
TseFI GTSAC 2 cut(s) 275, 625
TseI GCWGC 8 cut(s) 5, 148, 286, 334, 707, 788, 1255, 1442
Tsp45I GTSAC 2 cut(s) 275, 625
TspDTI ATGAA 4 cut(s) 455, 1103, 1347, 1508
TspGWI ACGGA 4 cut(s) 408, 461, 1243, 1642
TspRI CASTG 3 cut(s) 598, 1130, 1443
Vha464I CTTAAG 1 cut(s) 329
VneI GTGCAC 1 cut(s) 569
VpaK11BI GGWCC 2 cut(s) 385, 395
XapI RAATTY 5 cut(s) 80, 1009, 1037, 1112, 1355
XceI RCATGY 4 cut(s) 155, 309, 963, 1604
XcmI CCANNNNNNNNNTGG 1 cut(s) 358
XmiI GTMKAC 1 cut(s) 980
XspI CTAG 2 cut(s) 701, 1683
Zsp2I ATGCAT 2 cut(s) 205, 961
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.