FvH4_6g33631

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000591
Physical Location & Seq
Forward (+)
26647855 .. 26652384
4530 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g33631.t1

Sequence Viewer

Length: 1641 bp
ATGGAGGTTGATCATTGGAAGCAAAAGGGACCAATGGGGATTAGTGAGTCCTCGTCCACTTCATTCAACACAGAAAATATGATATTTCTTGTAGCGTCAAACCCAAATAGGCAGGCATTCTCATGTGTGGACGTCCGCACCGTTTTACGGTGCGAATTTCTGTCTGTTCGCTACCGTACGGCGCCGCGTGAGGGCGCGCCTCCACCCCAGCGAACTCCAGCAGTTCCCGACCACTTTCCATCCCCGAAGAGTCCGTTCTTTTCCAGTTTTCCGACGAGATCACCCAAAACTTCAAATAAAATCGATCTCGTTGGAAAACTGAAATTCGGCGGACTCGCCGGGGATGGAAAGTGGTCGGGGAAGCTGCTGGAGTCCGCTGGGGTGGAGGCGCGCCCTCGCGCGGCGCCGTACGCTGAATTGGGCCCCTCTCCCTCTTACGCTTGGAGAAGCATTCTTGATGGTAGGGATATATTGCGCCACGGCATTAAGCGACAAATTGGAGATGGGATGCACACTAATATTTGGTATGATCCTTGGTTGGAAGGAGAAAATTTGCTACCCTACCATTCTTCTCGAATACATGTGGCCGAGCTCTTTAATGGACCAGGTATGTGGAATATTGATCTACTGCATGAGTTGTTTCCACTACACATTGTTCAGAAAATTCTTGCATTACCAATTAGTACTCGAGTACATAATGATTGGTGGACTTGGGGTGAGGATAAGAAGGGCAGATTTACAGTCAAGTCAGCTTACCATGTTGCAAGGCGTCGGGTCTTCGCTGATAACGCCGCAGTTGCTAATCCTAGTTCACAGCTCTGGAACAAGATTTGGACCGCTCCGGTCCCAGGCAAAGTTAAGATTTGCGTATGGAAGGCAGCCTCAAATATTCTCCCTACACAAAGCAGACTTAGTGAACGCGGTATTGATATCGATACCCAATGTCCATTTTGTGTAGAAGATGTTGAATCACCTATCCATGCTTTACGTGATTGTGTCCATGCGGCTTCTTTCCTACAAGTTGCCCAAGTTCCTTATGTTCCAAGTGCTACTAATGTTCATGATTGCTTATGGGCAATATGGAGAAATCAGAACGAGCAAGTATGGAATGATGATGCCAAATCGGCTGAGCAATTAATCCCTAGTATTTTGGCATGGTGGGAGGAGTTCAAGAAAGCTAACTTACCTCTAAAATCACCATGCATGATAGGAGTACTGGTATTGGTGGGATATCGATATTTAGAGATCATGAAAGTGTGTGCTTGGGTGTTTTTGTCAAAATTCTTAGCAATCCCTAGTTCCCCTACCCATGGTGAGATGCTGGCCTTAATCGAGGGAGTTAGCTTAGCAGTTCAGCATGGTCTGGTTCCTTTAAAAGTTGAAACAAATTGCCAAGTGTTGGTGGACGCATTACATACAGGGATTTTAAGGGATTCAAATCTGGGATTTCTTATAGATGATCAACGTGAAGGATTGAGGACAGCATCGGCTGCTAGTTTGTCTTTTGTCCGCCGAACTGCTAACATAGCTGCTCACTCTTTGGCGCAGGTTGCTTTGCATACTAGAATGAATTTGGGTTTCTCTATTGTACCTTCTCTATTTGTTGAGGAGCTTATTTCTAACGAATGTAATGATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PfkB TB2_DP1_HVA22

Protein Analysis

547

Amino Acids

60.96

Weight (kDa)

8.23

Isoelectric Point (pI)

47.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 246 - 336 6.8e-15 zinc-binding in reverse transcriptase
RVT_3 PF13456 430 - 517 4.8e-11 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000591)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03566
fragaria_vesca FvH4_2g12622 FvH4_2g12642 FvH4_2g13902 FvH4_3g05011 FvH4_3g18961 FvH4_3g31940 FvH4_4g08421 FvH4_4g21351 FvH4_5g28071 FvH4_5g34871 FvH4_6g21812 FvH4_6g30441 FvH4_6g33631
rosa_chinensis RchiOBHm_Chr1g0320221 RchiOBHm_Chr1g0356521 RchiOBHm_Chr4g0389021 RchiOBHm_Chr5g0020651 RchiOBHm_Chr5g0027511
rosa_laevigata RLG00000002966 RLG00000019504
rosa_multiflora Rmu_co7963640.1_g000001 Rmu_co7988458.1_g000001 Rmu_co8109512.1_g000001 Rmu_co8136160.1_g000001 Rmu_co8253655.1_g000001 Rmu_sc0000388.1_g000040 Rmu_sc0000540.1_g000056 Rmu_sc0000574.1_g000013 Rmu_sc0000623.1_g000001 Rmu_sc0000795.1_g000005 Rmu_sc0000795.1_g000006 Rmu_sc0001063.1_g000001 Rmu_sc0002116.1_g000001 Rmu_sc0002192.1_g000012 Rmu_sc0002640.1_g000015 Rmu_sc0003337.1_g000039 Rmu_sc0004298.1_g000003 Rmu_sc0004771.1_g000001 Rmu_sc0006119.1_g000010 Rmu_sc0006633.1_g000007 Rmu_sc0007025.1_g000016 Rmu_sc0007221.1_g000002 Rmu_sc0007222.1_g000002 Rmu_sc0007806.1_g000016 Rmu_sc0008241.1_g000018 Rmu_sc0008348.1_g000001 Rmu_sc0009034.1_g000001 Rmu_sc0009955.1_g000004 Rmu_sc0018325.1_g000009 Rmu_sc0028328.1_g000002 Rmu_sc0030178.1_g000001 Rmu_sc0034381.1_g000001 Rmu_sc0041085.1_g000001 Rmu_sc0041085.1_g000002
rosa_roxburghii Rroxscaffold_3G00233230 Rroxscaffold_7G00193120 Rroxscaffold_7G00194820
rosa_rugosa Rorug01G0017000 Rorug01G0036400 Rorug01G0062600 Rorug01G0118500 Rorug02G0351500 Rorug02G0497600 Rorug03G0233200 Rorug03G0279500 Rorug03G0347600 Rorug04G0077100 Rorug04G0077200 Rorug04G0210900 Rorug05G0206900 Rorug07G0202900 Rorug07G0334000
rosa_samantha Rh2CG195700 Rh4DG035800
rosa_wichuraiana Rw0G005080 Rw0G013600 Rw2G020080 Rw2G024380 Rw5G002230 Rw5G036790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 135
Acc36I ACCTGC 1 cut(s) 1537
AccB1I GGYRCC 2 cut(s) 181, 403
AccB7I CCANNNNNTGG 1 cut(s) 1399
AccBSI CCGCTC 1 cut(s) 839
AccII CGCG 6 cut(s) 187, 197, 391, 399, 401, 921
AclWI GGATC 2 cut(s) 524, 1628
AcoI YGGCCR 1 cut(s) 585
AcsI RAATTY 6 cut(s) 155, 323, 550, 663, 1280, 1570
AcyI GRCGYC 4 cut(s) 132, 182, 404, 769
AfaI GTAC 6 cut(s) 178, 410, 685, 693, 1215, 1590
AfiI CCNNNNNNNGG 6 cut(s) 147, 191, 400, 848, 1310, 1399
AflIII ACRYGT 1 cut(s) 580
AgsI TTSAA 6 cut(s) 67, 294, 968, 1171, 1382, 1437
AjnI CCWGG 2 cut(s) 604, 847
AluBI AGCT 8 cut(s) 364, 592, 752, 817, 1178, 1344, 1529, 1612
AluI AGCT 8 cut(s) 364, 592, 752, 817, 1178, 1344, 1529, 1612
Alw21I GWGCWC 1 cut(s) 594
AlwI GGATC 2 cut(s) 524, 1628
Ama87I CYCGRG 1 cut(s) 687
AoxI GGCC 3 cut(s) 421, 585, 1323
ApaI GGGCCC 1 cut(s) 425
ApeKI GCWGC 4 cut(s) 364, 878, 1490, 1529
ApoI RAATTY 6 cut(s) 155, 323, 550, 663, 1280, 1570
AscI GGCGCGCC 2 cut(s) 195, 389
AseI ATTAAT 1 cut(s) 1136
AspLEI GCGC 9 cut(s) 184, 197, 199, 391, 393, 401, 406, 477, 1546
AspS9I GGNCC 6 cut(s) 29, 421, 422, 602, 834, 844
AsuC2I CCSGG 1 cut(s) 340
AsuHPI GGTGA 5 cut(s) 273, 728, 963, 1188, 1325
AvaI CYCGRG 1 cut(s) 687
AvaII GGWCC 4 cut(s) 29, 602, 834, 844
BaeGI GKGCMC 1 cut(s) 425
BanI GGYRCC 2 cut(s) 181, 403
BanII GRGCYC 2 cut(s) 425, 594
BbsI GAAGAC 1 cut(s) 769
Bbv12I GWGCWC 1 cut(s) 594
BbvI GCAGC 4 cut(s) 351, 890, 1477, 1516
BccI CCATC 4 cut(s) 247, 338, 452, 497
BceAI ACGGC 3 cut(s) 195, 391, 496
BciT130I CCWGG 2 cut(s) 606, 849
BclI TGATCA 2 cut(s) 10, 1459
BcnI CCSGG 1 cut(s) 340
BfaI CTAG 5 cut(s) 807, 1143, 1296, 1494, 1563
BfoI RGCGCY 2 cut(s) 185, 407
BfuAI ACCTGC 1 cut(s) 1537
BglI GCCNNNNNGGC 1 cut(s) 1124
BisI GCNGC 8 cut(s) 185, 365, 402, 792, 879, 1005, 1491, 1530
BlpI GCTNAGC 2 cut(s) 1128, 1345
BlsI GCNGC 8 cut(s) 186, 366, 403, 793, 880, 1006, 1492, 1531
BmcAI AGTACT 2 cut(s) 685, 1215
Bme1390I CCNGG 3 cut(s) 340, 606, 849
Bme18I GGWCC 4 cut(s) 29, 602, 834, 844
BmeT110I CYCGRG 1 cut(s) 687
BmgT120I GGNCC 6 cut(s) 29, 421, 422, 602, 834, 844
BmiI GGNNCC 7 cut(s) 30, 183, 405, 423, 424, 846, 1368
BmrFI CCNGG 3 cut(s) 340, 606, 849
BmsI GCATC 4 cut(s) 498, 1105, 1308, 1493
BpiI GAAGAC 1 cut(s) 769
BpmI CTGGAG 2 cut(s) 201, 389
Bpu1102I GCTNAGC 2 cut(s) 1128, 1345
BpuMI CCSGG 1 cut(s) 340
Bsa29I ATCGAT 3 cut(s) 303, 933, 1234
BsaAI YACGTR 1 cut(s) 989
BsaBI GATNNNNATC 1 cut(s) 1437
BsaHI GRCGYC 4 cut(s) 132, 182, 404, 769
BsaJI CCNNGG 5 cut(s) 339, 478, 533, 847, 1309
BsaWI WCCGGW 1 cut(s) 841
BsaXI ACNNNNNCTCC 2 cut(s) 1203, 1233
Bsc4I CCNNNNNNNGG 6 cut(s) 147, 191, 400, 848, 1310, 1399
Bse1I ACTGG 2 cut(s) 264, 1221
Bse8I GATNNNNATC 1 cut(s) 1437
BseBI CCWGG 2 cut(s) 606, 849
BseCI ATCGAT 3 cut(s) 303, 933, 1234
BseDI CCNNGG 5 cut(s) 339, 478, 533, 847, 1309
BseGI GGATG 3 cut(s) 239, 349, 513
BseJI GATNNNNATC 1 cut(s) 1437
BseLI CCNNNNNNNGG 6 cut(s) 147, 191, 400, 848, 1310, 1399
BseMII CTCAG 1 cut(s) 1119
BseNI ACTGG 2 cut(s) 264, 1221
BsePI GCGCGC 2 cut(s) 195, 389
BseRI GAGGAG 2 cut(s) 1178, 1622
BseSI GKGCMC 1 cut(s) 425
BseXI GCAGC 4 cut(s) 351, 890, 1477, 1516
BseYI CCCAGC 2 cut(s) 207, 377
Bsh1236I CGCG 6 cut(s) 187, 197, 391, 399, 401, 921
BshFI GGCC 3 cut(s) 423, 587, 1325
BshNI GGYRCC 2 cut(s) 181, 403
BshVI ATCGAT 3 cut(s) 303, 933, 1234
BsiHKAI GWGCWC 1 cut(s) 594
BsiHKCI CYCGRG 1 cut(s) 687
BsiSI CCGG 2 cut(s) 339, 842
BsiWI CGTACG 2 cut(s) 176, 408
BslFI GGGAC 2 cut(s) 42, 830
BslI CCNNNNNNNGG 6 cut(s) 147, 191, 400, 848, 1310, 1399
BsmFI GGGAC 2 cut(s) 42, 830
BsmI GAATGC 2 cut(s) 116, 450
BsnI GGCC 3 cut(s) 423, 587, 1325
BsoBI CYCGRG 1 cut(s) 687
Bsp120I GGGCCC 1 cut(s) 421
Bsp1286I GDGCHC 2 cut(s) 425, 594
Bsp143I GATC 8 cut(s) 10, 278, 304, 529, 622, 1245, 1459, 1633
Bsp1720I GCTNAGC 2 cut(s) 1128, 1345
Bsp19I CCATGG 1 cut(s) 1309
BspANI GGCC 3 cut(s) 423, 587, 1325
BspCNI CTCAG 1 cut(s) 1120
BspDI ATCGAT 3 cut(s) 303, 933, 1234
BspFNI CGCG 6 cut(s) 187, 197, 391, 399, 401, 921
BspHI TCATGA 2 cut(s) 1060, 1248
BspLI GGNNCC 7 cut(s) 30, 183, 405, 423, 424, 846, 1368
BspMI ACCTGC 1 cut(s) 1537
BspPI GGATC 2 cut(s) 524, 1628
BspT107I GGYRCC 2 cut(s) 181, 403
BsrBI CCGCTC 1 cut(s) 839
BsrI ACTGG 2 cut(s) 264, 1221
BssECI CCNNGG 5 cut(s) 339, 478, 533, 847, 1309
BssHII GCGCGC 2 cut(s) 195, 389
BssMI GATC 8 cut(s) 10, 278, 304, 529, 622, 1245, 1459, 1633
BssNI GRCGYC 4 cut(s) 132, 182, 404, 769
BssT1I CCWWGG 2 cut(s) 533, 1309
Bst2UI CCWGG 2 cut(s) 606, 849
Bst4CI ACNGT 4 cut(s) 142, 150, 176, 742
Bst6I CTCTTC 1 cut(s) 242
BstACI GRCGYC 4 cut(s) 132, 182, 404, 769
BstAPI GCANNNNNTGC 1 cut(s) 1490
BstBAI YACGTR 1 cut(s) 989
BstC8I GCNNGC 4 cut(s) 114, 197, 391, 1323
BstDEI CTNAG 4 cut(s) 911, 1128, 1285, 1345
BstDSI CCRYGG 2 cut(s) 478, 1309
BstF5I GGATG 3 cut(s) 239, 349, 513
BstFNI CGCG 6 cut(s) 187, 197, 391, 399, 401, 921
BstH2I RGCGCY 2 cut(s) 185, 407
BstHHI GCGC 9 cut(s) 184, 197, 199, 391, 393, 401, 406, 477, 1546
BstKTI GATC 8 cut(s) 13, 281, 307, 532, 625, 1248, 1462, 1636
BstMBI GATC 8 cut(s) 10, 278, 304, 529, 622, 1245, 1459, 1633
BstMWI GCNNNNNNNGC 7 cut(s) 410, 788, 797, 1124, 1490, 1526, 1550
BstNI CCWGG 2 cut(s) 606, 849
BstNSI RCATGY 1 cut(s) 584
BstSCI CCNGG 3 cut(s) 338, 604, 847
BstSLI GKGCMC 1 cut(s) 425
BstUI CGCG 6 cut(s) 187, 197, 391, 399, 401, 921
BstV1I GCAGC 4 cut(s) 351, 890, 1477, 1516
BstV2I GAAGAC 1 cut(s) 769
BstXI CCANNNNNNTGG 1 cut(s) 612
Bsu15I ATCGAT 3 cut(s) 303, 933, 1234
BsuRI GGCC 3 cut(s) 423, 587, 1325
BsuTUI ATCGAT 3 cut(s) 303, 933, 1234
BtgI CCRYGG 2 cut(s) 478, 1309
BtsCI GGATG 3 cut(s) 239, 349, 513
BveI ACCTGC 1 cut(s) 1537
Cac8I GCNNGC 4 cut(s) 114, 197, 391, 1323
CciI TCATGA 2 cut(s) 1060, 1248
CfoI GCGC 9 cut(s) 184, 197, 199, 391, 393, 401, 406, 477, 1546
Cfr13I GGNCC 6 cut(s) 29, 421, 422, 602, 834, 844
ClaI ATCGAT 3 cut(s) 303, 933, 1234
CseI GACGC 3 cut(s) 84, 758, 1415
CsiI ACCWGGT 1 cut(s) 604
Csp6I GTAC 6 cut(s) 177, 409, 684, 692, 1214, 1589
CviQI GTAC 6 cut(s) 177, 409, 684, 692, 1214, 1589
DdeI CTNAG 4 cut(s) 911, 1128, 1285, 1345
DinI GGCGCC 2 cut(s) 183, 405
DpnI GATC 8 cut(s) 12, 280, 306, 531, 624, 1247, 1461, 1635
DpnII GATC 8 cut(s) 10, 278, 304, 529, 622, 1245, 1459, 1633
DraI TTTAAA 1 cut(s) 1374
EaeI YGGCCR 1 cut(s) 585
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
EciI GGCGGA 2 cut(s) 345, 1499
Ecl136II GAGCTC 1 cut(s) 592
Eco130I CCWWGG 2 cut(s) 533, 1309
Eco24I GRGCYC 2 cut(s) 425, 594
Eco32I GATATC 2 cut(s) 931, 1232
Eco47I GGWCC 4 cut(s) 29, 602, 834, 844
Eco53kI GAGCTC 1 cut(s) 592
Eco88I CYCGRG 1 cut(s) 687
EcoICRI GAGCTC 1 cut(s) 592
EcoO109I RGGNCCY 1 cut(s) 422
EcoRII CCWGG 2 cut(s) 604, 847
EcoRV GATATC 2 cut(s) 931, 1232
EcoT14I CCWWGG 2 cut(s) 533, 1309
EcoT22I ATGCAT 1 cut(s) 1205
EcoT38I GRGCYC 2 cut(s) 425, 594
EgeI GGCGCC 2 cut(s) 183, 405
EheI GGCGCC 2 cut(s) 183, 405
ErhI CCWWGG 2 cut(s) 533, 1309
FaqI GGGAC 2 cut(s) 42, 830
FbaI TGATCA 2 cut(s) 10, 1459
Fnu4HI GCNGC 8 cut(s) 185, 365, 402, 792, 879, 1005, 1491, 1530
FokI GGATG 3 cut(s) 226, 356, 520
FriOI GRGCYC 2 cut(s) 425, 594
Fsp4HI GCNGC 8 cut(s) 185, 365, 402, 792, 879, 1005, 1491, 1530
FspBI CTAG 5 cut(s) 807, 1143, 1296, 1494, 1563
GlaI GCGC 9 cut(s) 183, 196, 198, 390, 392, 400, 405, 476, 1545
GluI GCNGC 8 cut(s) 185, 365, 402, 792, 879, 1005, 1491, 1530
GsaI CCCAGC 2 cut(s) 211, 381
GsuI CTGGAG 2 cut(s) 201, 389
HaeII RGCGCY 2 cut(s) 185, 407
HaeIII GGCC 3 cut(s) 423, 587, 1325
HapII CCGG 2 cut(s) 339, 842
HgaI GACGC 3 cut(s) 84, 758, 1415
HhaI GCGC 9 cut(s) 184, 197, 199, 391, 393, 401, 406, 477, 1546
Hin1I GRCGYC 4 cut(s) 132, 182, 404, 769
Hin6I GCGC 9 cut(s) 182, 195, 197, 389, 391, 399, 404, 475, 1544
HinP1I GCGC 9 cut(s) 182, 195, 197, 389, 391, 399, 404, 475, 1544
HinfI GANTC 6 cut(s) 47, 250, 333, 371, 968, 1433
HpaII CCGG 2 cut(s) 339, 842
HphI GGTGA 5 cut(s) 273, 728, 963, 1188, 1325
Hpy166II GTNNAC 6 cut(s) 57, 130, 708, 812, 917, 1405
Hpy188I TCNGA 3 cut(s) 273, 660, 1092
Hpy188III TCNNGA 7 cut(s) 227, 455, 573, 820, 1061, 1171, 1249
Hpy8I GTNNAC 6 cut(s) 57, 130, 708, 812, 917, 1405
Hpy99I CGWCG 2 cut(s) 277, 774
HpyAV CCTTC 5 cut(s) 536, 721, 868, 1463, 1602
HpyCH4III ACNGT 4 cut(s) 142, 150, 176, 742
HpyCH4IV ACGT 3 cut(s) 132, 988, 1465
HpyCH4V TGCA 6 cut(s) 511, 631, 671, 764, 1203, 1558
HpyF10VI GCNNNNNNNGC 7 cut(s) 410, 788, 797, 1124, 1490, 1526, 1550
HpyF3I CTNAG 4 cut(s) 911, 1128, 1285, 1345
HpySE526I ACGT 3 cut(s) 132, 988, 1465
Hsp92I GRCGYC 4 cut(s) 132, 182, 404, 769
HspAI GCGC 9 cut(s) 182, 195, 197, 389, 391, 399, 404, 475, 1544
KasI GGCGCC 2 cut(s) 181, 403
Ksp22I TGATCA 2 cut(s) 10, 1459
Kzo9I GATC 8 cut(s) 10, 278, 304, 529, 622, 1245, 1459, 1633
LmnI GCTCC 2 cut(s) 844, 1609
Lsp1109I GCAGC 4 cut(s) 351, 890, 1477, 1516
LweI GCATC 4 cut(s) 498, 1105, 1308, 1493
MabI ACCWGGT 1 cut(s) 604
MaeI CTAG 5 cut(s) 807, 1143, 1296, 1494, 1563
MaeII ACGT 3 cut(s) 132, 988, 1465
MalI GATC 8 cut(s) 12, 280, 306, 531, 624, 1247, 1461, 1635
MbiI CCGCTC 1 cut(s) 839
MboI GATC 8 cut(s) 10, 278, 304, 529, 622, 1245, 1459, 1633
MboII GAAGA 4 cut(s) 259, 561, 769, 971
MhlI GDGCHC 2 cut(s) 425, 594
Mly113I GGCGCC 2 cut(s) 182, 404
MlyI GAGTC 4 cut(s) 56, 259, 327, 380
MmeI TCCRAC 3 cut(s) 292, 296, 519
Mph1103I ATGCAT 1 cut(s) 1205
MseI TTAA 7 cut(s) 486, 597, 858, 1136, 1328, 1373, 1427
MslI CAYNNNNRTG 2 cut(s) 121, 1253
MspA1I CMGCKG 1 cut(s) 377
MspI CCGG 2 cut(s) 339, 842
MspR9I CCNGG 3 cut(s) 340, 606, 849
MteI GCGCNGCGC 1 cut(s) 402
Mva1269I GAATGC 2 cut(s) 116, 450
MvaI CCWGG 2 cut(s) 606, 849
MvnI CGCG 6 cut(s) 187, 197, 391, 399, 401, 921
MwoI GCNNNNNNNGC 7 cut(s) 410, 788, 797, 1124, 1490, 1526, 1550
NarI GGCGCC 2 cut(s) 182, 404
NciI CCSGG 1 cut(s) 340
NcoI CCATGG 1 cut(s) 1309
NdeII GATC 8 cut(s) 10, 278, 304, 529, 622, 1245, 1459, 1633
NlaIV GGNNCC 7 cut(s) 30, 183, 405, 423, 424, 846, 1368
NmeAIII GCCGAG 1 cut(s) 613
NsiI ATGCAT 1 cut(s) 1205
NspI RCATGY 1 cut(s) 584
PaeR7I CTCGAG 1 cut(s) 687
PagI TCATGA 2 cut(s) 1060, 1248
PalAI GGCGCGCC 2 cut(s) 195, 389
PauI GCGCGC 2 cut(s) 195, 389
PciI ACATGT 1 cut(s) 580
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PctI GAATGC 2 cut(s) 116, 450
PfeI GAWTC 2 cut(s) 968, 1433
Pfl23II CGTACG 2 cut(s) 176, 408
PflMI CCANNNNNTGG 1 cut(s) 1399
PkrI GCNGC 8 cut(s) 186, 366, 403, 793, 880, 1006, 1492, 1531
PleI GAGTC 4 cut(s) 55, 258, 327, 379
PluTI GGCGCC 2 cut(s) 185, 407
PpsI GAGTC 4 cut(s) 55, 258, 327, 379
Ppu21I YACGTR 1 cut(s) 989
PscI ACATGT 1 cut(s) 580
PshBI ATTAAT 1 cut(s) 1136
Psp124BI GAGCTC 1 cut(s) 594
Psp6I CCWGG 2 cut(s) 604, 847
PspFI CCCAGC 2 cut(s) 207, 377
PspGI CCWGG 2 cut(s) 604, 847
PspLI CGTACG 2 cut(s) 176, 408
PspN4I GGNNCC 7 cut(s) 30, 183, 405, 423, 424, 846, 1368
PspOMI GGGCCC 1 cut(s) 421
PspPI GGNCC 6 cut(s) 29, 421, 422, 602, 834, 844
PspXI VCTCGAGB 1 cut(s) 687
PteI GCGCGC 2 cut(s) 195, 389
RsaI GTAC 6 cut(s) 178, 410, 685, 693, 1215, 1590
RsaNI GTAC 6 cut(s) 177, 409, 684, 692, 1214, 1589
RseI CAYNNNNRTG 2 cut(s) 121, 1253
SacI GAGCTC 1 cut(s) 594
SaqAI TTAA 7 cut(s) 486, 597, 858, 1136, 1328, 1373, 1427
SatI GCNGC 8 cut(s) 185, 365, 402, 792, 879, 1005, 1491, 1530
Sau3AI GATC 8 cut(s) 10, 278, 304, 529, 622, 1245, 1459, 1633
Sau96I GGNCC 6 cut(s) 29, 421, 422, 602, 834, 844
ScaI AGTACT 2 cut(s) 685, 1215
SchI GAGTC 4 cut(s) 56, 259, 327, 380
ScrFI CCNGG 3 cut(s) 340, 606, 849
SduI GDGCHC 2 cut(s) 425, 594
SexAI ACCWGGT 1 cut(s) 604
SfaNI GCATC 4 cut(s) 498, 1105, 1308, 1493
SfoI GGCGCC 2 cut(s) 183, 405
Sfr274I CTCGAG 1 cut(s) 687
SgsI GGCGCGCC 2 cut(s) 195, 389
SinI GGWCC 4 cut(s) 29, 602, 834, 844
SlaI CTCGAG 1 cut(s) 687
SmiMI CAYNNNNRTG 2 cut(s) 121, 1253
SmlI CTYRAG 1 cut(s) 687
SmoI CTYRAG 1 cut(s) 687
SspDI GGCGCC 2 cut(s) 181, 403
SspI AATATT 3 cut(s) 520, 619, 889
SspMI CTAG 5 cut(s) 807, 1143, 1296, 1494, 1563
SstI GAGCTC 1 cut(s) 594
StyD4I CCNGG 3 cut(s) 338, 604, 847
StyI CCWWGG 2 cut(s) 533, 1309
TaaI ACNGT 4 cut(s) 142, 150, 176, 742
TaiI ACGT 3 cut(s) 135, 991, 1468
TaqI TCGA 6 cut(s) 303, 574, 688, 933, 1234, 1332
TatI WGTACW 3 cut(s) 683, 691, 1213
TauI GCSGC 4 cut(s) 187, 404, 794, 1007
TfiI GAWTC 2 cut(s) 968, 1433
Tru1I TTAA 7 cut(s) 486, 597, 858, 1136, 1328, 1373, 1427
Tru9I TTAA 7 cut(s) 486, 597, 858, 1136, 1328, 1373, 1427
TseI GCWGC 4 cut(s) 364, 878, 1490, 1529
TspDTI ATGAA 4 cut(s) 51, 1049, 1265, 1583
TspGWI ACGGA 1 cut(s) 243
Van91I CCANNNNNTGG 1 cut(s) 1399
VpaK11BI GGWCC 4 cut(s) 29, 602, 834, 844
VspI ATTAAT 1 cut(s) 1136
XapI RAATTY 6 cut(s) 155, 323, 550, 663, 1280, 1570
XceI RCATGY 1 cut(s) 584
XhoI CTCGAG 1 cut(s) 687
XspI CTAG 5 cut(s) 807, 1143, 1296, 1494, 1563
ZraI GACGTC 1 cut(s) 133
ZrmI AGTACT 2 cut(s) 685, 1215
Zsp2I ATGCAT 1 cut(s) 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.