Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 69, 92 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 201 |
| AluBI | AGCT | 3 cut(s) | 73, 115, 185 |
| AluI | AGCT | 3 cut(s) | 73, 115, 185 |
| AoxI | GGCC | 1 cut(s) | 137 |
| ApeKI | GCWGC | 1 cut(s) | 112 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 197 |
| AspS9I | GGNCC | 1 cut(s) | 203 |
| AvaII | GGWCC | 1 cut(s) | 203 |
| BbsI | GAAGAC | 1 cut(s) | 200 |
| BbvI | GCAGC | 1 cut(s) | 124 |
| BclI | TGATCA | 1 cut(s) | 187 |
| BisI | GCNGC | 1 cut(s) | 113 |
| BlsI | GCNGC | 1 cut(s) | 114 |
| Bme18I | GGWCC | 1 cut(s) | 203 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 201 |
| BmgT120I | GGNCC | 1 cut(s) | 203 |
| BpiI | GAAGAC | 1 cut(s) | 200 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 116, 146 |
| BseGI | GGATG | 1 cut(s) | 48 |
| BseXI | GCAGC | 1 cut(s) | 124 |
| BshFI | GGCC | 1 cut(s) | 139 |
| BsmI | GAATGC | 1 cut(s) | 98 |
| BsnI | GGCC | 1 cut(s) | 139 |
| Bsp143I | GATC | 1 cut(s) | 187 |
| BspANI | GGCC | 1 cut(s) | 139 |
| BssMI | GATC | 1 cut(s) | 187 |
| Bst4CI | ACNGT | 2 cut(s) | 13, 132 |
| Bst6I | CTCTTC | 1 cut(s) | 54 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 118 |
| BstF5I | GGATG | 1 cut(s) | 48 |
| BstKTI | GATC | 1 cut(s) | 190 |
| BstMBI | GATC | 1 cut(s) | 187 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 118 |
| BstV1I | GCAGC | 1 cut(s) | 124 |
| BstV2I | GAAGAC | 1 cut(s) | 200 |
| BsuRI | GGCC | 1 cut(s) | 139 |
| BtsCI | GGATG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 1 cut(s) | 203 |
| CviJI | RGCY | 4 cut(s) | 73, 115, 139, 185 |
| CviKI_1 | RGCY | 4 cut(s) | 73, 115, 139, 185 |
| DpnI | GATC | 1 cut(s) | 189 |
| DpnII | GATC | 1 cut(s) | 187 |
| DriI | GACNNNNNGTC | 1 cut(s) | 201 |
| Eam1104I | CTCTTC | 1 cut(s) | 54 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 201 |
| EarI | CTCTTC | 1 cut(s) | 54 |
| Eco47I | GGWCC | 1 cut(s) | 203 |
| FaiI | YATR | 1 cut(s) | 158 |
| FbaI | TGATCA | 1 cut(s) | 187 |
| Fnu4HI | GCNGC | 1 cut(s) | 113 |
| FokI | GGATG | 1 cut(s) | 55 |
| Fsp4HI | GCNGC | 1 cut(s) | 113 |
| GluI | GCNGC | 1 cut(s) | 113 |
| HaeIII | GGCC | 1 cut(s) | 139 |
| HincII | GTYRAC | 1 cut(s) | 9 |
| HindII | GTYRAC | 1 cut(s) | 9 |
| HindIII | AAGCTT | 1 cut(s) | 71 |
| HpaI | GTTAAC | 1 cut(s) | 9 |
| Hpy166II | GTNNAC | 1 cut(s) | 9 |
| Hpy188I | TCNGA | 2 cut(s) | 192, 215 |
| Hpy8I | GTNNAC | 1 cut(s) | 9 |
| HpyCH4III | ACNGT | 2 cut(s) | 13, 132 |
| HpyCH4V | TGCA | 2 cut(s) | 112, 121 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 118 |
| Ksp22I | TGATCA | 1 cut(s) | 187 |
| KspAI | GTTAAC | 1 cut(s) | 9 |
| Kzo9I | GATC | 1 cut(s) | 187 |
| LpnPI | CCDG | 3 cut(s) | 25, 107, 153 |
| Lsp1109I | GCAGC | 1 cut(s) | 124 |
| MalI | GATC | 1 cut(s) | 189 |
| MboI | GATC | 1 cut(s) | 187 |
| MboII | GAAGA | 2 cut(s) | 71, 205 |
| MnlI | CCTC | 2 cut(s) | 55, 94 |
| MroXI | GAANNNNTTC | 1 cut(s) | 197 |
| MseI | TTAA | 2 cut(s) | 8, 75 |
| Mva1269I | GAATGC | 1 cut(s) | 98 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 118 |
| NdeII | GATC | 1 cut(s) | 187 |
| PctI | GAATGC | 1 cut(s) | 98 |
| PdmI | GAANNNNTTC | 1 cut(s) | 197 |
| PkrI | GCNGC | 1 cut(s) | 114 |
| PspPI | GGNCC | 1 cut(s) | 203 |
| SaqAI | TTAA | 2 cut(s) | 8, 75 |
| SatI | GCNGC | 1 cut(s) | 113 |
| Sau3AI | GATC | 1 cut(s) | 187 |
| Sau96I | GGNCC | 1 cut(s) | 203 |
| SetI | ASST | 5 cut(s) | 34, 66, 75, 117, 187 |
| SgeI | CNNG | 7 cut(s) | 52, 60, 64, 94, 110, 134, 152 |
| SinI | GGWCC | 1 cut(s) | 203 |
| TaaI | ACNGT | 2 cut(s) | 13, 132 |
| TaqII | GACCGA | 1 cut(s) | 191 |
| Tru1I | TTAA | 2 cut(s) | 8, 75 |
| Tru9I | TTAA | 2 cut(s) | 8, 75 |
| TscAI | CASTG | 1 cut(s) | 137 |
| TseI | GCWGC | 1 cut(s) | 112 |
| TspGWI | ACGGA | 1 cut(s) | 178 |
| TspRI | CASTG | 1 cut(s) | 137 |
| VpaK11BI | GGWCC | 1 cut(s) | 203 |
| XmnI | GAANNNNTTC | 1 cut(s) | 197 |