Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 597, 960 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 523 |
| AccIII | TCCGGA | 1 cut(s) | 1375 |
| AciI | CCGC | 2 cut(s) | 330, 775 |
| AclWI | GGATC | 1 cut(s) | 1386 |
| AcoI | YGGCCR | 2 cut(s) | 276, 2158 |
| AcsI | RAATTY | 2 cut(s) | 404, 1202 |
| AfaI | GTAC | 7 cut(s) | 24, 256, 1560, 1752, 2054, 2125, 2149 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1175 |
| AflIII | ACRYGT | 2 cut(s) | 1555, 2092 |
| AgsI | TTSAA | 7 cut(s) | 499, 901, 1073, 1202, 1748, 1789, 1955 |
| AjiI | CACGTC | 1 cut(s) | 790 |
| AjnI | CCWGG | 2 cut(s) | 445, 1033 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1272, 1304 |
| Alw21I | GWGCWC | 1 cut(s) | 1597 |
| Alw26I | GTCTC | 4 cut(s) | 1568, 1940, 2031, 2078 |
| Alw44I | GTGCAC | 1 cut(s) | 1593 |
| AlwI | GGATC | 1 cut(s) | 1386 |
| Ama87I | CYCGRG | 1 cut(s) | 1272 |
| Aor13HI | TCCGGA | 1 cut(s) | 1375 |
| AoxI | GGCC | 6 cut(s) | 233, 276, 938, 1021, 1269, 2158 |
| ApaLI | GTGCAC | 1 cut(s) | 1593 |
| ApeKI | GCWGC | 4 cut(s) | 887, 1154, 1480, 2185 |
| ApoI | RAATTY | 2 cut(s) | 404, 1202 |
| AseI | ATTAAT | 2 cut(s) | 306, 1125 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 840 |
| AspLEI | GCGC | 1 cut(s) | 1195 |
| AspS9I | GGNCC | 5 cut(s) | 383, 772, 1022, 1031, 1270 |
| AsuHPI | GGTGA | 2 cut(s) | 236, 359 |
| AvaI | CYCGRG | 1 cut(s) | 1272 |
| AvaII | GGWCC | 3 cut(s) | 383, 772, 1031 |
| BaeGI | GKGCMC | 1 cut(s) | 1597 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 246, 279 |
| BalI | TGGCCA | 2 cut(s) | 278, 2160 |
| BanII | GRGCYC | 1 cut(s) | 325 |
| BauI | CACGAG | 1 cut(s) | 1109 |
| BbsI | GAAGAC | 2 cut(s) | 1541, 1967 |
| Bbv12I | GWGCWC | 1 cut(s) | 1597 |
| BbvI | GCAGC | 4 cut(s) | 899, 1141, 1492, 2197 |
| BceAI | ACGGC | 2 cut(s) | 1575, 1757 |
| BciT130I | CCWGG | 2 cut(s) | 447, 1035 |
| BciVI | GTATCC | 1 cut(s) | 2111 |
| BcoDI | GTCTC | 4 cut(s) | 1568, 1940, 2031, 2078 |
| BfaI | CTAG | 8 cut(s) | 153, 231, 855, 1077, 1082, 1587, 1641, 2000 |
| BfmI | CTRYAG | 2 cut(s) | 360, 1854 |
| BfuI | GTATCC | 1 cut(s) | 2111 |
| BisI | GCNGC | 4 cut(s) | 888, 1155, 1481, 2186 |
| BlsI | GCNGC | 4 cut(s) | 889, 1156, 1482, 2187 |
| Bme1390I | CCNGG | 2 cut(s) | 447, 1035 |
| Bme18I | GGWCC | 3 cut(s) | 383, 772, 1031 |
| BmeT110I | CYCGRG | 1 cut(s) | 1272 |
| BmgBI | CACGTC | 1 cut(s) | 790 |
| BmgT120I | GGNCC | 5 cut(s) | 383, 772, 1022, 1031, 1270 |
| BmiI | GGNNCC | 4 cut(s) | 324, 384, 1089, 1290 |
| BmrFI | CCNGG | 2 cut(s) | 447, 1035 |
| BmrI | ACTGGG | 1 cut(s) | 267 |
| BmsI | GCATC | 6 cut(s) | 102, 415, 637, 808, 1198, 1209 |
| BmuI | ACTGGG | 1 cut(s) | 267 |
| BpiI | GAAGAC | 2 cut(s) | 1541, 1967 |
| BpmI | CTGGAG | 1 cut(s) | 563 |
| Bpu10I | CCTNAGC | 1 cut(s) | 794 |
| BpuEI | CTTGAG | 1 cut(s) | 1902 |
| Bsa29I | ATCGAT | 1 cut(s) | 96 |
| BsaBI | GATNNNNATC | 2 cut(s) | 24, 1223 |
| BsaI | GGTCTC | 1 cut(s) | 1568 |
| BsaJI | CCNNGG | 2 cut(s) | 250, 971 |
| BsaWI | WCCGGW | 1 cut(s) | 1375 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1593, 1623 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1175 |
| Bse1I | ACTGG | 5 cut(s) | 41, 262, 546, 1186, 1627 |
| Bse3DI | GCAATG | 2 cut(s) | 874, 1393 |
| Bse8I | GATNNNNATC | 2 cut(s) | 24, 1223 |
| BseAI | TCCGGA | 1 cut(s) | 1375 |
| BseBI | CCWGG | 2 cut(s) | 447, 1035 |
| BseCI | ATCGAT | 1 cut(s) | 96 |
| BseDI | CCNNGG | 2 cut(s) | 250, 971 |
| BseGI | GGATG | 9 cut(s) | 518, 652, 691, 748, 799, 981, 1224, 1342, 1375 |
| BseJI | GATNNNNATC | 2 cut(s) | 24, 1223 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1175 |
| BseMI | GCAATG | 2 cut(s) | 874, 1393 |
| BseMII | CTCAG | 1 cut(s) | 1935 |
| BseNI | ACTGG | 5 cut(s) | 41, 262, 546, 1186, 1627 |
| BseRI | GAGGAG | 3 cut(s) | 1100, 1617, 1775 |
| BseSI | GKGCMC | 1 cut(s) | 1597 |
| BseXI | GCAGC | 4 cut(s) | 899, 1141, 1492, 2197 |
| BshFI | GGCC | 6 cut(s) | 235, 278, 940, 1023, 1271, 2160 |
| BshVI | ATCGAT | 1 cut(s) | 96 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1597 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1272 |
| BsiSI | CCGG | 2 cut(s) | 803, 1376 |
| BslFI | GGGAC | 3 cut(s) | 396, 1595, 1817 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1175 |
| BsmAI | GTCTC | 4 cut(s) | 1568, 1940, 2031, 2078 |
| BsmBI | CGTCTC | 1 cut(s) | 2078 |
| BsmFI | GGGAC | 3 cut(s) | 396, 1595, 1817 |
| BsmI | GAATGC | 2 cut(s) | 80, 1490 |
| BsnI | GGCC | 6 cut(s) | 235, 278, 940, 1023, 1271, 2160 |
| Bso31I | GGTCTC | 1 cut(s) | 1568 |
| BsoBI | CYCGRG | 1 cut(s) | 1272 |
| Bsp1286I | GDGCHC | 2 cut(s) | 325, 1597 |
| Bsp13I | TCCGGA | 1 cut(s) | 1375 |
| Bsp1407I | TGTACA | 2 cut(s) | 22, 1558 |
| Bsp143I | GATC | 3 cut(s) | 1378, 1681, 2005 |
| BspACI | CCGC | 2 cut(s) | 330, 775 |
| BspANI | GGCC | 6 cut(s) | 235, 278, 940, 1023, 1271, 2160 |
| BspCNI | CTCAG | 1 cut(s) | 1936 |
| BspDI | ATCGAT | 1 cut(s) | 96 |
| BspEI | TCCGGA | 1 cut(s) | 1375 |
| BspLI | GGNNCC | 4 cut(s) | 324, 384, 1089, 1290 |
| BspPI | GGATC | 1 cut(s) | 1386 |
| BspTNI | GGTCTC | 1 cut(s) | 1568 |
| BsrDI | GCAATG | 2 cut(s) | 874, 1393 |
| BsrGI | TGTACA | 2 cut(s) | 22, 1558 |
| BsrI | ACTGG | 5 cut(s) | 41, 262, 546, 1186, 1627 |
| BssECI | CCNNGG | 2 cut(s) | 250, 971 |
| BssMI | GATC | 3 cut(s) | 1378, 1681, 2005 |
| BssSI | CACGAG | 1 cut(s) | 1109 |
| BssT1I | CCWWGG | 2 cut(s) | 250, 971 |
| Bst2BI | CACGAG | 1 cut(s) | 1109 |
| Bst2UI | CCWGG | 2 cut(s) | 447, 1035 |
| Bst4CI | ACNGT | 2 cut(s) | 812, 1858 |
| Bst6I | CTCTTC | 1 cut(s) | 1836 |
| BstAUI | TGTACA | 2 cut(s) | 22, 1558 |
| BstC8I | GCNNGC | 2 cut(s) | 166, 237 |
| BstDEI | CTNAG | 4 cut(s) | 506, 794, 1137, 1944 |
| BstF5I | GGATG | 9 cut(s) | 518, 652, 691, 748, 799, 981, 1224, 1342, 1375 |
| BstHHI | GCGC | 1 cut(s) | 1195 |
| BstKTI | GATC | 3 cut(s) | 1381, 1684, 2008 |
| BstMAI | GTCTC | 4 cut(s) | 1568, 1940, 2031, 2078 |
| BstMBI | GATC | 3 cut(s) | 1378, 1681, 2005 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 320, 329, 2143 |
| BstNI | CCWGG | 2 cut(s) | 447, 1035 |
| BstNSI | RCATGY | 6 cut(s) | 654, 1559, 1696, 1810, 1894, 2096 |
| BstSCI | CCNGG | 2 cut(s) | 445, 1033 |
| BstSFI | CTRYAG | 2 cut(s) | 360, 1854 |
| BstSLI | GKGCMC | 1 cut(s) | 1597 |
| BstV1I | GCAGC | 4 cut(s) | 899, 1141, 1492, 2197 |
| BstV2I | GAAGAC | 2 cut(s) | 1541, 1967 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 257 |
| Bsu15I | ATCGAT | 1 cut(s) | 96 |
| BsuI | GTATCC | 1 cut(s) | 2111 |
| BsuRI | GGCC | 6 cut(s) | 235, 278, 940, 1023, 1271, 2160 |
| BsuTUI | ATCGAT | 1 cut(s) | 96 |
| BtrI | CACGTC | 1 cut(s) | 790 |
| BtsCI | GGATG | 9 cut(s) | 518, 652, 691, 748, 799, 981, 1224, 1342, 1375 |
| BtsIMutI | CAGTG | 2 cut(s) | 1234, 1863 |
| Cac8I | GCNNGC | 2 cut(s) | 166, 237 |
| CfoI | GCGC | 1 cut(s) | 1195 |
| Cfr13I | GGNCC | 5 cut(s) | 383, 772, 1022, 1031, 1270 |
| ClaI | ATCGAT | 1 cut(s) | 96 |
| Csp6I | GTAC | 7 cut(s) | 23, 255, 1559, 1751, 2053, 2124, 2148 |
| CviQI | GTAC | 7 cut(s) | 23, 255, 1559, 1751, 2053, 2124, 2148 |
| DdeI | CTNAG | 4 cut(s) | 506, 794, 1137, 1944 |
| DpnI | GATC | 3 cut(s) | 1380, 1683, 2007 |
| DpnII | GATC | 3 cut(s) | 1378, 1681, 2005 |
| DraI | TTTAAA | 1 cut(s) | 552 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 523 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 523 |
| EaeI | YGGCCR | 2 cut(s) | 276, 2158 |
| Eam1104I | CTCTTC | 1 cut(s) | 1836 |
| EarI | CTCTTC | 1 cut(s) | 1836 |
| Eco130I | CCWWGG | 2 cut(s) | 250, 971 |
| Eco147I | AGGCCT | 1 cut(s) | 235 |
| Eco24I | GRGCYC | 1 cut(s) | 325 |
| Eco31I | GGTCTC | 1 cut(s) | 1568 |
| Eco47I | GGWCC | 3 cut(s) | 383, 772, 1031 |
| Eco88I | CYCGRG | 1 cut(s) | 1272 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1031 |
| EcoRII | CCWGG | 2 cut(s) | 445, 1033 |
| EcoT14I | CCWWGG | 2 cut(s) | 250, 971 |
| EcoT22I | ATGCAT | 1 cut(s) | 652 |
| EcoT38I | GRGCYC | 1 cut(s) | 325 |
| ErhI | CCWWGG | 2 cut(s) | 250, 971 |
| Esp3I | CGTCTC | 1 cut(s) | 2078 |
| FaqI | GGGAC | 3 cut(s) | 396, 1595, 1817 |
| Fnu4HI | GCNGC | 4 cut(s) | 888, 1155, 1481, 2186 |
| FokI | GGATG | 9 cut(s) | 525, 659, 698, 755, 786, 988, 1231, 1349, 1382 |
| FriOI | GRGCYC | 1 cut(s) | 325 |
| Fsp4HI | GCNGC | 4 cut(s) | 888, 1155, 1481, 2186 |
| FspBI | CTAG | 8 cut(s) | 153, 231, 855, 1077, 1082, 1587, 1641, 2000 |
| GlaI | GCGC | 1 cut(s) | 1194 |
| GluI | GCNGC | 4 cut(s) | 888, 1155, 1481, 2186 |
| GsuI | CTGGAG | 1 cut(s) | 563 |
| HaeIII | GGCC | 6 cut(s) | 235, 278, 940, 1023, 1271, 2160 |
| HapII | CCGG | 2 cut(s) | 803, 1376 |
| HhaI | GCGC | 1 cut(s) | 1195 |
| Hin6I | GCGC | 1 cut(s) | 1193 |
| HinP1I | GCGC | 1 cut(s) | 1193 |
| HincII | GTYRAC | 2 cut(s) | 265, 1008 |
| HindII | GTYRAC | 2 cut(s) | 265, 1008 |
| HindIII | AAGCTT | 1 cut(s) | 577 |
| HpaI | GTTAAC | 1 cut(s) | 265 |
| HpaII | CCGG | 2 cut(s) | 803, 1376 |
| HphI | GGTGA | 2 cut(s) | 236, 359 |
| Hpy166II | GTNNAC | 6 cut(s) | 265, 1008, 1253, 1595, 2110, 2132 |
| Hpy188I | TCNGA | 3 cut(s) | 677, 911, 1945 |
| Hpy188III | TCNNGA | 7 cut(s) | 566, 723, 845, 1082, 1376, 1444, 1838 |
| Hpy8I | GTNNAC | 6 cut(s) | 265, 1008, 1253, 1595, 2110, 2132 |
| HpyAV | CCTTC | 3 cut(s) | 1234, 1279, 2174 |
| HpyCH4III | ACNGT | 2 cut(s) | 812, 1858 |
| HpyCH4IV | ACGT | 1 cut(s) | 789 |
| HpyCH4V | TGCA | 8 cut(s) | 245, 401, 428, 650, 707, 981, 1514, 1595 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 320, 329, 2143 |
| HpyF3I | CTNAG | 4 cut(s) | 506, 794, 1137, 1944 |
| HpySE526I | ACGT | 1 cut(s) | 789 |
| HspAI | GCGC | 1 cut(s) | 1193 |
| Kpn2I | TCCGGA | 1 cut(s) | 1375 |
| KspAI | GTTAAC | 1 cut(s) | 265 |
| Kzo9I | GATC | 3 cut(s) | 1378, 1681, 2005 |
| LmnI | GCTCC | 4 cut(s) | 328, 423, 544, 1087 |
| Lsp1109I | GCAGC | 4 cut(s) | 899, 1141, 1492, 2197 |
| LweI | GCATC | 6 cut(s) | 102, 415, 637, 808, 1198, 1209 |
| MaeI | CTAG | 8 cut(s) | 153, 231, 855, 1077, 1082, 1587, 1641, 2000 |
| MaeII | ACGT | 1 cut(s) | 789 |
| MaeIII | GTNAC | 4 cut(s) | 489, 1093, 1906, 1928 |
| MalI | GATC | 3 cut(s) | 1380, 1683, 2007 |
| MboI | GATC | 3 cut(s) | 1378, 1681, 2005 |
| MboII | GAAGA | 8 cut(s) | 62, 549, 1541, 1826, 1853, 1880, 1972, 2069 |
| MfeI | CAATTG | 4 cut(s) | 315, 1743, 1965, 2030 |
| MhlI | GDGCHC | 2 cut(s) | 325, 1597 |
| MlsI | TGGCCA | 2 cut(s) | 278, 2160 |
| MluNI | TGGCCA | 2 cut(s) | 278, 2160 |
| MlyI | GAGTC | 2 cut(s) | 1121, 1449 |
| Mox20I | TGGCCA | 2 cut(s) | 278, 2160 |
| Mph1103I | ATGCAT | 1 cut(s) | 652 |
| MroI | TCCGGA | 1 cut(s) | 1375 |
| MroXI | GAANNNNTTC | 1 cut(s) | 840 |
| MscI | TGGCCA | 2 cut(s) | 278, 2160 |
| MslI | CAYNNNNRTG | 2 cut(s) | 45, 1881 |
| Msp20I | TGGCCA | 2 cut(s) | 278, 2160 |
| MspA1I | CMGCKG | 1 cut(s) | 890 |
| MspI | CCGG | 2 cut(s) | 803, 1376 |
| MspR9I | CCNGG | 2 cut(s) | 447, 1035 |
| MunI | CAATTG | 4 cut(s) | 315, 1743, 1965, 2030 |
| Mva1269I | GAATGC | 2 cut(s) | 80, 1490 |
| MvaI | CCWGG | 2 cut(s) | 447, 1035 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 320, 329, 2143 |
| NdeII | GATC | 3 cut(s) | 1378, 1681, 2005 |
| NlaIV | GGNNCC | 4 cut(s) | 324, 384, 1089, 1290 |
| NsiI | ATGCAT | 1 cut(s) | 652 |
| NspI | RCATGY | 6 cut(s) | 654, 1559, 1696, 1810, 1894, 2096 |
| PceI | AGGCCT | 1 cut(s) | 235 |
| PciI | ACATGT | 2 cut(s) | 1555, 2092 |
| PctI | GAATGC | 2 cut(s) | 80, 1490 |
| PdmI | GAANNNNTTC | 1 cut(s) | 840 |
| PfeI | GAWTC | 8 cut(s) | 227, 395, 587, 719, 746, 1263, 2024, 2068 |
| PkrI | GCNGC | 4 cut(s) | 889, 1156, 1482, 2187 |
| PleI | GAGTC | 2 cut(s) | 1120, 1448 |
| PpsI | GAGTC | 2 cut(s) | 1120, 1448 |
| PpuMI | RGGWCCY | 1 cut(s) | 1031 |
| PscI | ACATGT | 2 cut(s) | 1555, 2092 |
| PshBI | ATTAAT | 2 cut(s) | 306, 1125 |
| PsiI | TTATAA | 2 cut(s) | 597, 960 |
| Psp5II | RGGWCCY | 1 cut(s) | 1031 |
| Psp6I | CCWGG | 2 cut(s) | 445, 1033 |
| PspGI | CCWGG | 2 cut(s) | 445, 1033 |
| PspN4I | GGNNCC | 4 cut(s) | 324, 384, 1089, 1290 |
| PspPI | GGNCC | 5 cut(s) | 383, 772, 1022, 1031, 1270 |
| PspPPI | RGGWCCY | 1 cut(s) | 1031 |
| PvuII | CAGCTG | 1 cut(s) | 890 |
| RsaI | GTAC | 7 cut(s) | 24, 256, 1560, 1752, 2054, 2125, 2149 |
| RsaNI | GTAC | 7 cut(s) | 23, 255, 1559, 1751, 2053, 2124, 2148 |
| RseI | CAYNNNNRTG | 2 cut(s) | 45, 1881 |
| SatI | GCNGC | 4 cut(s) | 888, 1155, 1481, 2186 |
| Sau3AI | GATC | 3 cut(s) | 1378, 1681, 2005 |
| Sau96I | GGNCC | 5 cut(s) | 383, 772, 1022, 1031, 1270 |
| SchI | GAGTC | 2 cut(s) | 1121, 1449 |
| ScrFI | CCNGG | 2 cut(s) | 447, 1035 |
| SduI | GDGCHC | 2 cut(s) | 325, 1597 |
| SfaNI | GCATC | 6 cut(s) | 102, 415, 637, 808, 1198, 1209 |
| SfcI | CTRYAG | 2 cut(s) | 360, 1854 |
| SinI | GGWCC | 3 cut(s) | 383, 772, 1031 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 45, 1881 |
| SmlI | CTYRAG | 1 cut(s) | 1917 |
| SmoI | CTYRAG | 1 cut(s) | 1917 |
| SseBI | AGGCCT | 1 cut(s) | 235 |
| SsiI | CCGC | 2 cut(s) | 330, 775 |
| SspI | AATATT | 2 cut(s) | 1530, 1796 |
| SspMI | CTAG | 8 cut(s) | 153, 231, 855, 1077, 1082, 1587, 1641, 2000 |
| StuI | AGGCCT | 1 cut(s) | 235 |
| StyD4I | CCNGG | 2 cut(s) | 445, 1033 |
| StyI | CCWWGG | 2 cut(s) | 250, 971 |
| TaaI | ACNGT | 2 cut(s) | 812, 1858 |
| TaiI | ACGT | 1 cut(s) | 792 |
| TaqI | TCGA | 6 cut(s) | 96, 484, 724, 1438, 1627, 2066 |
| TatI | WGTACW | 4 cut(s) | 22, 1558, 1750, 2123 |
| TfiI | GAWTC | 8 cut(s) | 227, 395, 587, 719, 746, 1263, 2024, 2068 |
| TscAI | CASTG | 2 cut(s) | 1234, 1863 |
| TseI | GCWGC | 4 cut(s) | 887, 1154, 1480, 2185 |
| TspGWI | ACGGA | 2 cut(s) | 47, 1382 |
| TspRI | CASTG | 2 cut(s) | 1234, 1863 |
| VneI | GTGCAC | 1 cut(s) | 1593 |
| VpaK11BI | GGWCC | 3 cut(s) | 383, 772, 1031 |
| VspI | ATTAAT | 2 cut(s) | 306, 1125 |
| XapI | RAATTY | 2 cut(s) | 404, 1202 |
| XbaI | TCTAGA | 1 cut(s) | 1081 |
| XceI | RCATGY | 6 cut(s) | 654, 1559, 1696, 1810, 1894, 2096 |
| XmnI | GAANNNNTTC | 1 cut(s) | 840 |
| XspI | CTAG | 8 cut(s) | 153, 231, 855, 1077, 1082, 1587, 1641, 2000 |
| Zsp2I | ATGCAT | 1 cut(s) | 652 |