Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009457

Physical Location & Seq

Genomic Coordinates Reverse (-)

17583601 .. 17586707

Gene Structure 3107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G47700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGGAGGCGATCAAACCACTTCCACAGGTCTCGAGCTTCTCCGCTTCGGTATTTAGCTTTCTCGATGGCAGATTCAAAGAATCCACGGATCTCTCTCATTCTACGGGTCTGGTTTCCGAGTTACAGACGGAGATTTCCGAATTGGATCAGAGATTGGCCGGATTAAATCGCCAGCTCGAGTCAGGTCTCGCTGCTTACGCTTCGTTTTCCGATCGCGTCGGTGGTCTATTTTTCGAGGTTAATGCCAAATTGGCTGATCTCTCTTCTTCTACCTCCGTTACTCGCTCCGCGTCAGATAGCGGAAAGGAGGAGGAGGCGACGGAGCATGTAGCCGGAGAGGATCTTCCTTCATTAGCAAAGGAAGTAGCACAAGTTGAGTCTGTGCGTGCTTATGCTGAGACTGCACTAAAACTTGACACTTTAGTTGGTGATATTGAGGATGCTGTGATGTCTTCTTTGAATAAAAACTTAAGAACATCTCGGTCAAGTGGTTTTGAAGAAGTGCGTCTACATGCTATTAAAACACTTAAAACGACAGAAGAGATACTGAGTTCAGTAGCAAAGAGACATCCTCGGTGGGCACGTCTTGTTTCTGCTGTTGATCATAGAGTTGATAGAGCTTTAGCTATGATGAGACCTCAGGCAATTGCTGATTACAGAGCGTTGCTTTCTTCTCTTCGATGGCCACCTCAGCTTTCTACACTAACTTCGGCAAGTCTTGATTCAAAGTCAGAAAATGTTCAAAATCCGCTTTTCAACATGGAAGGGAGCCTCAAAAGTCAATACTGTGGAAGTTTTCATGCCTTGTGTAGCCTGCAGGGGTTACAGTTGCAAAGAAAGTCGCGGCAGCTTGGGATCCATAAGGGAGAAAATGTTCTTTTCCACCAGCCACTCTGGGCTATTGAAGAGCTGGTCAACCCTCTGACAGTTGCATCTCAGCGACATTTTACAAAGTGGAGTGAAAAGCCAGAATTCATTTTTGCCCTTGTGTATAAAATCACAAGGGACTATGTCGATTCTATGGATGAGTTGTTACAACCGCTTGTGGATGAAGCAAAACTAGCTGGGTACAGTTGCCGAGAAGAGTGGGTTTCGGCTATGGTAAGCTCACTGTCTTTGTACTTGGTGAAAGAGATCTTTCCTATATATGTTGGTCAGCTAGACGAAGCAAATGAAACTGATCTTCGTTCTGAGGCTAAGGTCTCGTGGCTCCATCTCATTGACCTGATGATCTCCTTTGATAAGCGAGTTCAGTCTTTGGTATCACAATCAGGAATACTTTCGCTTCAAGAAGATGGGAATCTTTTGAGAATTTCCTCTCTCTCAGTTTTCTGTGACAGACCTGATTGGCTTGATTTATGGGCAGAGATAGAGCTAGATGAGAGGCTCGTCAAATTCAAGGAGGAGATTGATAACGACAGAAATTGGACAGCGAAGGTCCAAGACGAACTCATCTCCAGTTCCAACGTTTACAGACCACCAATCATTTCCAGCATCTTTCTACAGCATTTGTCATCAATAATCGAACGATCCAAATCAGTGCCGGCCTTATATTTGAGGGCTAGGTTCCTGAGACTGGCAGCCTCACCAACAATTCATAAGTTCTTGGATTGCCTCCTTCTCAGGTGCCAAGACGCCGACGGACTAACTGCATTAACTGAAAATAACGATCTAATCAAGGTCTCGAACTCTATTAATGCTGGTCACTACATTGAATCTGTCTTAGAAGAATGGTCTGAGGATGTCTTTTTCCTTGAAATGGGAACTGGACAGCACGATCCACAGGAAGTTCCAGGACTGGAGAACTTTACTGAACCTTCTGAAGGTATTTTCGGAGAAGAATTTGAAAAGTTGGAGAAGTTCCGGCTAGAGTGGATAAACAAATTGTCGGTGGTGATCTTGAGAGGCTTTGATGCTCGAATCCGAGAATACATAAAAAACAGAAAGCAATGGCAGGAGAAGAAAGACAAAGAATGGACGGTGTCAAGGGCACTAGTTGGGGCTCTAGACTACTTGCAAGGAAAAACGTCTATAATAGAAGAAAATCTAAACAAAGCAGACTTTACCGCTATGTGGAGAACTCTAGCCTCAGAGATAGACAAGTTGTTCTTCAACAGCATCTTGATGGCGAACGTGAAGTTTACCAATGATGGAGTCGAAAGGTTAAAAGTAGACATGGAGGTTCTATATGGGGTTTTCCGGACGTGGTGTGTTAGACCCGAAGGTTTCTTTCCTAAACTAAGTGAGGGGCTTACGCTTCTGAAGATGGAAGAGAAGCAAGTGAAGGACGGTCTGAGTAGAGGCGATAAGTGGCTACGTGAGAATAGAATTCGATATTTGAGTGAAGCCGAAGCCAAGAAGGTAGCGAAGAGTAGAGTGTTCTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006888 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0019898 GO:0031090 GO:0031312 GO:0031984 GO:0033036 GO:0033365 GO:0034613 GO:0042175 GO:0042406 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RINT1_TIP1

Protein Analysis

795

Amino Acids

90.23

Weight (kDa)

5.37

Isoelectric Point (pI)

46.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RINT1_TIP1	PF04437	299 - 788	1.3e-39	RINT-1/TIP-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009457)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47700
fragaria_vesca	FvH4_5g15230 FvH4_5g15230 FvH4_5g15230
malus_domestica	MD06G1190600.v1.1 MD14G1197500.v1.1
prunus_persica	Prupe.5G189500_v2.0.a1
pyrus_communis	pycom06g16910 pycom14g16400
rosa_chinensis	RchiOBHm_Chr7g0180931
rosa_laevigata	RLG00000005224
rosa_multiflora	Rmu_co8437493.1_g000001 Rmu_sc0004056.1_g000008 Rmu_sc0028441.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272410
rosa_rugosa	Rorug06G0437700 Rorug06G0437700
rosa_samantha	Rh7AG039100 Rh7BG038400 Rh7CG040100 Rh7DG038500
rosa_wichuraiana	Rw7G003200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1626
AccI	GTMKAC	2 cut(s)	508, 2172
AccII	CGCG	3 cut(s)	216, 290, 844
AccIII	TCCGGA	1 cut(s)	2199
AciI	CCGC	7 cut(s)	42, 288, 300, 749, 844, 1040, 2067
AclI	AACGTT	1 cut(s)	1467
AclWI	GGATC	7 cut(s)	96, 153, 348, 850, 863, 1524, 1772
AcoI	YGGCCR	2 cut(s)	156, 683
AcsI	RAATTY	5 cut(s)	971, 1311, 1394, 1841, 2328
AcuI	CTGAAG	2 cut(s)	1842, 2282
AcyI	GRCGYC	1 cut(s)	1635
AfaI	GTAC	2 cut(s)	1070, 1121
AfiI	CCNNNNNNNGG	4 cut(s)	1576, 1759, 1823, 2073
AflII	CTTAAG	1 cut(s)	469
AhlI	ACTAGT	1 cut(s)	1993
AjiI	CACGTC	2 cut(s)	584, 2205
AjnI	CCWGG	1 cut(s)	1792
AloI	GAACNNNNNNTCC	2 cut(s)	858, 890
Alw26I	GTCTC	8 cut(s)	34, 191, 392, 559, 628, 1207, 1567, 1687
AlwI	GGATC	7 cut(s)	96, 153, 348, 850, 863, 1524, 1772
Ama87I	CYCGRG	2 cut(s)	31, 176
Aor13HI	TCCGGA	1 cut(s)	2199
AoxI	GGCC	3 cut(s)	156, 683, 1545
ApeKI	GCWGC	3 cut(s)	191, 847, 1580
ApoI	RAATTY	5 cut(s)	971, 1311, 1394, 1841, 2328
AseI	ATTAAT	1 cut(s)	1695
Asp700I	GAANNNNTTC	3 cut(s)	738, 873, 1279
AspS9I	GGNCC	1 cut(s)	1438
AsuHPI	GGTGA	4 cut(s)	440, 1138, 1578, 1906
AvaI	CYCGRG	2 cut(s)	31, 176
AvaII	GGWCC	1 cut(s)	1438
AxyI	CCTNAGG	1 cut(s)	639
BaeGI	GKGCMC	2 cut(s)	583, 1993
BalI	TGGCCA	1 cut(s)	685
BamHI	GGATCC	1 cut(s)	855
BanI	GGYRCC	1 cut(s)	1626
BanII	GRGCYC	1 cut(s)	2005
BarI	GAAGNNNNNNTAC	2 cut(s)	492, 524
BauI	CACGAG	1 cut(s)	1204
BbsI	GAAGAC	1 cut(s)	444
BbvCI	CCTCAGC	1 cut(s)	690
BbvI	GCAGC	3 cut(s)	178, 859, 1592
BccI	CCATC	7 cut(s)	59, 675, 1221, 1289, 2119, 2144, 2260
BcgI	CGANNNNNNTGC	2 cut(s)	224, 258
BciT130I	CCWGG	1 cut(s)	1794
BclI	TGATCA	1 cut(s)	601
BcoDI	GTCTC	8 cut(s)	34, 191, 392, 559, 628, 1207, 1567, 1687
BcuI	ACTAGT	1 cut(s)	1993
BfaI	CTAG	8 cut(s)	1061, 1160, 1376, 1563, 1868, 1994, 2006, 2084
BfmI	CTRYAG	2 cut(s)	815, 1502
BfrI	CTTAAG	1 cut(s)	469
BglI	GCCNNNNNGGC	1 cut(s)	251
BglII	AGATCT	1 cut(s)	1134
BisI	GCNGC	4 cut(s)	192, 845, 848, 1581
BlsI	GCNGC	4 cut(s)	193, 846, 849, 1582
Bme1390I	CCNGG	1 cut(s)	1794
Bme18I	GGWCC	1 cut(s)	1438
BmeT110I	CYCGRG	2 cut(s)	31, 176
BmgBI	CACGTC	2 cut(s)	584, 2205
BmgT120I	GGNCC	1 cut(s)	1438
BmiI	GGNNCC	5 cut(s)	770, 857, 1211, 1568, 1628
BmrFI	CCNGG	1 cut(s)	1794
BmsI	GCATC	5 cut(s)	430, 941, 1503, 1903, 2127
BpiI	GAAGAC	1 cut(s)	444
BplI	GAGNNNNNCTC	2 cut(s)	556, 588
BpmI	CTGGAG	2 cut(s)	1441, 1820
Bpu10I	CCTNAGC	2 cut(s)	690, 1197
BpuEI	CTTGAG	1 cut(s)	1921
BsaAI	YACGTR	1 cut(s)	2318
BsaBI	GATNNNNATC	2 cut(s)	1299, 1534
BsaHI	GRCGYC	1 cut(s)	1635
BsaI	GGTCTC	5 cut(s)	34, 191, 628, 1207, 1687
BsaJI	CCNNGG	2 cut(s)	84, 572
BsaWI	WCCGGW	1 cut(s)	2199
BsaXI	ACNNNNNCTCC	2 cut(s)	858, 888
Bsc4I	CCNNNNNNNGG	4 cut(s)	1576, 1759, 1823, 2073
Bse118I	RCCGGY	1 cut(s)	1543
Bse1I	ACTGG	4 cut(s)	1458, 1581, 1771, 1803
Bse21I	CCTNAGG	1 cut(s)	639
Bse3DI	GCAATG	1 cut(s)	1955
Bse8I	GATNNNNATC	2 cut(s)	1299, 1534
BseAI	TCCGGA	1 cut(s)	2199
BseBI	CCWGG	1 cut(s)	1794
BseDI	CCNNGG	2 cut(s)	84, 572
BseGI	GGATG	5 cut(s)	445, 568, 1030, 1054, 1747
BseJI	GATNNNNATC	2 cut(s)	1299, 1534
BseLI	CCNNNNNNNGG	4 cut(s)	1576, 1759, 1823, 2073
BseMI	GCAATG	1 cut(s)	1955
BseNI	ACTGG	4 cut(s)	1458, 1581, 1771, 1803
BseRI	GAGGAG	3 cut(s)	323, 326, 1418
BseSI	GKGCMC	2 cut(s)	583, 1993
BseXI	GCAGC	3 cut(s)	178, 859, 1592
BseYI	CCCAGC	1 cut(s)	1064
BsgI	GTGCAG	1 cut(s)	387
Bsh1236I	CGCG	3 cut(s)	216, 290, 844
Bsh1285I	CGRYCG	1 cut(s)	214
BshFI	GGCC	3 cut(s)	158, 685, 1547
BshNI	GGYRCC	1 cut(s)	1626
BsiEI	CGRYCG	1 cut(s)	214
BsiHKCI	CYCGRG	2 cut(s)	31, 176
BsiSI	CCGG	5 cut(s)	159, 333, 1544, 1864, 2200
BslFI	GGGAC	1 cut(s)	1019
BslI	CCNNNNNNNGG	4 cut(s)	1576, 1759, 1823, 2073
BsmAI	GTCTC	8 cut(s)	34, 191, 392, 559, 628, 1207, 1567, 1687
BsmFI	GGGAC	1 cut(s)	1019
BsnI	GGCC	3 cut(s)	158, 685, 1547
Bso31I	GGTCTC	5 cut(s)	34, 191, 628, 1207, 1687
BsoBI	CYCGRG	2 cut(s)	31, 176
Bsp1286I	GDGCHC	3 cut(s)	583, 1993, 2005
Bsp13I	TCCGGA	1 cut(s)	2199
BspACI	CCGC	7 cut(s)	42, 288, 300, 749, 844, 1040, 2067
BspANI	GGCC	3 cut(s)	158, 685, 1547
BspEI	TCCGGA	1 cut(s)	2199
BspFNI	CGCG	3 cut(s)	216, 290, 844
BspLI	GGNNCC	5 cut(s)	770, 857, 1211, 1568, 1628
BspMAI	CTGCAG	1 cut(s)	819
BspPI	GGATC	7 cut(s)	96, 153, 348, 850, 863, 1524, 1772
BspQI	GCTCTTC	1 cut(s)	900
BspT107I	GGYRCC	1 cut(s)	1626
BspTI	CTTAAG	1 cut(s)	469
BspTNI	GGTCTC	5 cut(s)	34, 191, 628, 1207, 1687
BsrDI	GCAATG	1 cut(s)	1955
BsrFI	RCCGGY	1 cut(s)	1543
BsrI	ACTGG	4 cut(s)	1458, 1581, 1771, 1803
BssAI	RCCGGY	1 cut(s)	1543
BssECI	CCNNGG	2 cut(s)	84, 572
BssNI	GRCGYC	1 cut(s)	1635
BssSI	CACGAG	1 cut(s)	1204
Bst2BI	CACGAG	1 cut(s)	1204
Bst2UI	CCWGG	1 cut(s)	1794
Bst4CI	ACNGT	7 cut(s)	788, 828, 928, 1073, 1113, 1981, 2291
Bst6I	CTCTTC	7 cut(s)	268, 534, 681, 900, 1077, 2265, 2363
BstACI	GRCGYC	1 cut(s)	1635
BstAFI	CTTAAG	1 cut(s)	469
BstBAI	YACGTR	1 cut(s)	2318
BstC8I	GCNNGC	4 cut(s)	173, 387, 815, 1545
BstDSI	CCRYGG	1 cut(s)	84
BstENI	CCTNNNNNAGG	1 cut(s)	1821
BstF5I	GGATG	5 cut(s)	445, 568, 1030, 1054, 1747
BstFNI	CGCG	3 cut(s)	216, 290, 844
BstMAI	GTCTC	8 cut(s)	34, 191, 392, 559, 628, 1207, 1567, 1687
BstMCI	CGRYCG	1 cut(s)	214
BstMWI	GCNNNNNNNGC	5 cut(s)	197, 251, 401, 691, 1061
BstNI	CCWGG	1 cut(s)	1794
BstNSI	RCATGY	2 cut(s)	329, 515
BstSCI	CCNGG	1 cut(s)	1792
BstSFI	CTRYAG	2 cut(s)	815, 1502
BstSLI	GKGCMC	2 cut(s)	583, 1993
BstUI	CGCG	3 cut(s)	216, 290, 844
BstV1I	GCAGC	3 cut(s)	178, 859, 1592
BstV2I	GAAGAC	1 cut(s)	444
BstX2I	RGATCY	4 cut(s)	88, 340, 855, 1134
BstYI	RGATCY	4 cut(s)	88, 340, 855, 1134
Bsu36I	CCTNAGG	1 cut(s)	639
BsuRI	GGCC	3 cut(s)	158, 685, 1547
BtgI	CCRYGG	1 cut(s)	84
BtrI	CACGTC	2 cut(s)	584, 2205
BtsCI	GGATG	5 cut(s)	445, 568, 1030, 1054, 1747
BtsIMutI	CAGTG	2 cut(s)	1109, 1545
Cac8I	GCNNGC	4 cut(s)	173, 387, 815, 1545
Cfr10I	RCCGGY	1 cut(s)	1543
Cfr13I	GGNCC	1 cut(s)	1438
CseI	GACGC	4 cut(s)	205, 279, 494, 1643
Csp6I	GTAC	2 cut(s)	1069, 1120
CviAII	CATG	5 cut(s)	326, 512, 760, 800, 2176
CviQI	GTAC	2 cut(s)	1069, 1120
EaeI	YGGCCR	2 cut(s)	156, 683
Eam1104I	CTCTTC	7 cut(s)	268, 534, 681, 900, 1077, 2265, 2363
EarI	CTCTTC	7 cut(s)	268, 534, 681, 900, 1077, 2265, 2363
Eco24I	GRGCYC	1 cut(s)	2005
Eco31I	GGTCTC	5 cut(s)	34, 191, 628, 1207, 1687
Eco47I	GGWCC	1 cut(s)	1438
Eco57I	CTGAAG	2 cut(s)	1842, 2282
Eco81I	CCTNAGG	1 cut(s)	639
Eco88I	CYCGRG	2 cut(s)	31, 176
EcoNI	CCTNNNNNAGG	1 cut(s)	1821
EcoRI	GAATTC	2 cut(s)	971, 2328
EcoRII	CCWGG	1 cut(s)	1792
EcoT38I	GRGCYC	1 cut(s)	2005
FaeI	CATG	5 cut(s)	329, 515, 763, 803, 2179
FalI	AAGNNNNNCTT	2 cut(s)	2093, 2125
FaqI	GGGAC	1 cut(s)	1019
FatI	CATG	5 cut(s)	325, 511, 759, 799, 2175
FbaI	TGATCA	1 cut(s)	601
FblI	GTMKAC	2 cut(s)	508, 2172
Fnu4HI	GCNGC	4 cut(s)	192, 845, 848, 1581
FokI	GGATG	5 cut(s)	452, 555, 1037, 1061, 1754
FriOI	GRGCYC	1 cut(s)	2005
Fsp4HI	GCNGC	4 cut(s)	192, 845, 848, 1581
FspBI	CTAG	8 cut(s)	1061, 1160, 1376, 1563, 1868, 1994, 2006, 2084
GluI	GCNGC	4 cut(s)	192, 845, 848, 1581
GsaI	CCCAGC	1 cut(s)	1068
GsuI	CTGGAG	2 cut(s)	1441, 1820
HaeIII	GGCC	3 cut(s)	158, 685, 1547
HapII	CCGG	5 cut(s)	159, 333, 1544, 1864, 2200
HgaI	GACGC	4 cut(s)	205, 279, 494, 1643
Hin1I	GRCGYC	1 cut(s)	1635
Hin1II	CATG	5 cut(s)	329, 515, 763, 803, 2179
HincII	GTYRAC	1 cut(s)	916
HindII	GTYRAC	1 cut(s)	916
HpaII	CCGG	5 cut(s)	159, 333, 1544, 1864, 2200
HphI	GGTGA	4 cut(s)	440, 1138, 1578, 1906
Hpy166II	GTNNAC	5 cut(s)	509, 916, 1471, 2142, 2173
Hpy8I	GTNNAC	5 cut(s)	509, 916, 1471, 2142, 2173
Hpy99I	CGWCG	3 cut(s)	221, 322, 1643
HpyAV	CCTTC	9 cut(s)	357, 758, 1429, 1628, 1817, 1827, 2216, 2278, 2353
HpyCH4III	ACNGT	7 cut(s)	788, 828, 928, 1073, 1113, 1981, 2291
HpyCH4IV	ACGT	6 cut(s)	583, 1467, 2027, 2133, 2204, 2317
HpyCH4V	TGCA	6 cut(s)	404, 817, 832, 932, 1652, 2017
HpyF10VI	GCNNNNNNNGC	5 cut(s)	197, 251, 401, 691, 1061
HpySE526I	ACGT	6 cut(s)	583, 1467, 2027, 2133, 2204, 2317
Hsp92I	GRCGYC	1 cut(s)	1635
Hsp92II	CATG	5 cut(s)	329, 515, 763, 803, 2179
Kpn2I	TCCGGA	1 cut(s)	2199
KroI	GCCGGC	1 cut(s)	1543
KroNI	GCCGGC	1 cut(s)	1545
Ksp22I	TGATCA	1 cut(s)	601
LguI	GCTCTTC	1 cut(s)	900
LmnI	GCTCC	4 cut(s)	290, 322, 768, 1215
Lsp1109I	GCAGC	3 cut(s)	178, 859, 1592
LweI	GCATC	5 cut(s)	430, 941, 1503, 1903, 2127
MaeI	CTAG	8 cut(s)	1061, 1160, 1376, 1563, 1868, 1994, 2006, 2084
MaeII	ACGT	6 cut(s)	583, 1467, 2027, 2133, 2204, 2317
MaeIII	GTNAC	6 cut(s)	120, 277, 822, 1032, 1334, 1703
MfeI	CAATTG	1 cut(s)	645
MflI	RGATCY	4 cut(s)	88, 340, 855, 1134
MhlI	GDGCHC	3 cut(s)	583, 1993, 2005
MlsI	TGGCCA	1 cut(s)	685
MluNI	TGGCCA	1 cut(s)	685
MlyI	GAGTC	3 cut(s)	188, 386, 2163
MmeI	TCCRAC	2 cut(s)	1488, 1833
Mox20I	TGGCCA	1 cut(s)	685
MroI	TCCGGA	1 cut(s)	2199
MroNI	GCCGGC	1 cut(s)	1543
MroXI	GAANNNNTTC	3 cut(s)	738, 873, 1279
MscI	TGGCCA	1 cut(s)	685
MseI	TTAA	8 cut(s)	164, 240, 470, 519, 528, 1655, 1695, 2165
MslI	CAYNNNNRTG	1 cut(s)	2123
Msp20I	TGGCCA	1 cut(s)	685
MspCI	CTTAAG	1 cut(s)	469
MspI	CCGG	5 cut(s)	159, 333, 1544, 1864, 2200
MspR9I	CCNGG	1 cut(s)	1794
MunI	CAATTG	1 cut(s)	645
MvaI	CCWGG	1 cut(s)	1794
MvnI	CGCG	3 cut(s)	216, 290, 844
MwoI	GCNNNNNNNGC	5 cut(s)	197, 251, 401, 691, 1061
NaeI	GCCGGC	1 cut(s)	1545
NgoMIV	GCCGGC	1 cut(s)	1543
NlaIII	CATG	5 cut(s)	329, 515, 763, 803, 2179
NlaIV	GGNNCC	5 cut(s)	770, 857, 1211, 1568, 1628
NmeAIII	GCCGAG	1 cut(s)	1103
NmuCI	GTSAC	2 cut(s)	1334, 1703
NspI	RCATGY	2 cut(s)	329, 515
PaeR7I	CTCGAG	2 cut(s)	31, 176
PciSI	GCTCTTC	1 cut(s)	900
PcsI	WCGNNNNNNNCGW	1 cut(s)	580
PdiI	GCCGGC	1 cut(s)	1545
PdmI	GAANNNNTTC	3 cut(s)	738, 873, 1279
PfeI	GAWTC	7 cut(s)	72, 80, 722, 1016, 1300, 1715, 1920
PflFI	GACNNNGTC	2 cut(s)	1010, 1981
PfoI	TCCNGGA	1 cut(s)	1792
PkrI	GCNGC	4 cut(s)	193, 846, 849, 1582
Ple19I	CGATCG	1 cut(s)	214
PleI	GAGTC	3 cut(s)	187, 385, 2162
PpsI	GAGTC	3 cut(s)	187, 385, 2162
Ppu21I	YACGTR	1 cut(s)	2318
PshBI	ATTAAT	1 cut(s)	1695
Psp1406I	AACGTT	1 cut(s)	1467
Psp6I	CCWGG	1 cut(s)	1792
PspFI	CCCAGC	1 cut(s)	1064
PspGI	CCWGG	1 cut(s)	1792
PspN4I	GGNNCC	5 cut(s)	770, 857, 1211, 1568, 1628
PspPI	GGNCC	1 cut(s)	1438
PspXI	VCTCGAGB	1 cut(s)	176
PstI	CTGCAG	1 cut(s)	819
PsuI	RGATCY	4 cut(s)	88, 340, 855, 1134
PsyI	GACNNNGTC	2 cut(s)	1010, 1981
PvuI	CGATCG	1 cut(s)	214
RsaI	GTAC	2 cut(s)	1070, 1121
RsaNI	GTAC	2 cut(s)	1069, 1120
RseI	CAYNNNNRTG	1 cut(s)	2123
SapI	GCTCTTC	1 cut(s)	900
SaqAI	TTAA	8 cut(s)	164, 240, 470, 519, 528, 1655, 1695, 2165
SatI	GCNGC	4 cut(s)	192, 845, 848, 1581
Sau96I	GGNCC	1 cut(s)	1438
SbfI	CCTGCAGG	1 cut(s)	819
SchI	GAGTC	3 cut(s)	188, 386, 2163
ScrFI	CCNGG	1 cut(s)	1794
SdaI	CCTGCAGG	1 cut(s)	819
SduI	GDGCHC	3 cut(s)	583, 1993, 2005
SfaNI	GCATC	5 cut(s)	430, 941, 1503, 1903, 2127
SfcI	CTRYAG	2 cut(s)	815, 1502
Sfr274I	CTCGAG	2 cut(s)	31, 176
SinI	GGWCC	1 cut(s)	1438
SlaI	CTCGAG	2 cut(s)	31, 176
SmiMI	CAYNNNNRTG	1 cut(s)	2123
SmlI	CTYRAG	4 cut(s)	31, 176, 469, 1900
SmoI	CTYRAG	4 cut(s)	31, 176, 469, 1900
SpeI	ACTAGT	1 cut(s)	1993
Sse8387I	CCTGCAGG	1 cut(s)	819
SsiI	CCGC	7 cut(s)	42, 288, 300, 749, 844, 1040, 2067
SspMI	CTAG	8 cut(s)	1061, 1160, 1376, 1563, 1868, 1994, 2006, 2084
StyD4I	CCNGG	1 cut(s)	1792
TaaI	ACNGT	7 cut(s)	788, 828, 928, 1073, 1113, 1981, 2291
TaiI	ACGT	6 cut(s)	586, 1470, 2030, 2136, 2207, 2320
TaqII	GACCGA	1 cut(s)	471
TatI	WGTACW	1 cut(s)	1119
TauI	GCSGC	1 cut(s)	847
TfiI	GAWTC	7 cut(s)	72, 80, 722, 1016, 1300, 1715, 1920
Tru1I	TTAA	8 cut(s)	164, 240, 470, 519, 528, 1655, 1695, 2165
Tru9I	TTAA	8 cut(s)	164, 240, 470, 519, 528, 1655, 1695, 2165
TscAI	CASTG	2 cut(s)	1116, 1545
TseFI	GTSAC	2 cut(s)	1334, 1703
TseI	GCWGC	3 cut(s)	191, 847, 1580
Tsp45I	GTSAC	2 cut(s)	1334, 1703
TspDTI	ATGAA	6 cut(s)	339, 788, 964, 1065, 1188, 1586
TspGWI	ACGGA	5 cut(s)	101, 143, 265, 335, 1656
TspRI	CASTG	2 cut(s)	1116, 1545
Tth111I	GACNNNGTC	2 cut(s)	1010, 1981
Vha464I	CTTAAG	1 cut(s)	469
VpaK11BI	GGWCC	1 cut(s)	1438
VspI	ATTAAT	1 cut(s)	1695
XagI	CCTNNNNNAGG	1 cut(s)	1821
XapI	RAATTY	5 cut(s)	971, 1311, 1394, 1841, 2328
XbaI	TCTAGA	1 cut(s)	2005
XceI	RCATGY	2 cut(s)	329, 515
XhoI	CTCGAG	2 cut(s)	31, 176
XmiI	GTMKAC	2 cut(s)	508, 2172
XmnI	GAANNNNTTC	3 cut(s)	738, 873, 1279
XspI	CTAG	8 cut(s)	1061, 1160, 1376, 1563, 1868, 1994, 2006, 2084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.