Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0009457

Physical Location & Seq

Genomic Coordinates Forward (+)

21021908 .. 21025985

Gene Structure 4078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g16910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

ATGAACCGAATGTCGAAGCCAATACTTTCCCCAAGGTTGGGCAGCCGAATAATAGAGCATAACCTTCTCAAAAGCAAAGCCCAATATAGTGCCCATTTGAATCAATTTTCAGTCTCTAATCTCTCAACGAAAGCAAAAGCACAAATAAGCACGGCCTTTCAGTCGCTGAAATTCCCGTTAAAAACCCTAAAATACCCTCGCTCCCCATTCAAATTTCCCACTCGCACCACCGGACCGGAATGGTTTGAGACGACCATGGATTCGGCGGTCCAGACCCTCCCTCCCGCCTCCGACCTCCCGCCCTCGATCGTCTCCTTCCTCGACGACAAGTTCCGGACCTATGAAAATCTGAGCGGGGCTCCGACTCTCCTGTCGGAGCTCCAATCCCAGTGCGGTGACCTGGATAGAACCCTAATCGACCTGAATCGGAGGCTCGGATCCTCGCTTCTGACTTACGCTTCGTTCTCCGATCGAGTCCACGGCCTCTTAGGCGGTATCAATGCCCGATTGGCGGGTCTCGGATCCTCCACCCGCTCTCGCACTTCAGATGGAAAGGGGAACGAGAGGGCGGAGCAGATATTGGGAGAGGAGCTGCCGGCGTTGGCCAAGGAAGTGGCGAGAGTCCAGTCCGTTCGATCATACGCAGAGACTGCGTTGAAGCTTCAAACTATGATTGGTGATATTGAAGATGCTGTATCTTCTACCATGAAGAAAAACTCATGGAAGCATTCAGCAAGACAGAATTCAGAAGAAATGCGTCTGGGTGCTATTAAAACTCTTAAATTGATAGAAGATGTTTTAACTTCAGTTACCAAGACACACCCTCAATGGGCACATCTTGTGTCAACAGTTGATCACAGAGTAGATCGAGCTCTGGCCGTTTTAAGACCCCATGCTATAGCAGATCACCGGGCACTTCTTACTTCCCTGGGATGGCCACCGCCTCTTGCCACTTTGACTTCCTCAACTCCAGATACAGGGAGATCAACTGAAGTTCTGAATCCTCTTTTCACGATGCAAGGAGACCTCAAAGATCAGTACTGTGAAAACTTTTTAGCCTTGTGCGGTCTACAGGAGTTGCAAAGACGAAGAAAATCGCGTCAACTAGAGGGCTATAATCGTGAGCTTGCTCTTCACCAGCCACTTTGGGTGATTGAAGAGCTTGTGAATCCTATATCATTGGCATCCCAACGCCATTTCACAAAATGGGTTGATAAGCCAGAATTTATACTTGCTCTTGTCTACAAGACCACCAGGGATTATGTTGACTCTATGGATGAATTATTGCAACCACTGGTTGATGAAGCAATGTTAACCGGGTACAGTTGCAGAGAAGAATGGATTTCTGGAATGGTATCATCCTTATCGACATACTTAGCGAAAGAGATATTTCCAAAGTATGCTGGACAACCAGATGAAGATAGCGTAACGGGTACTCAGTCACAGGCTAGAATATCCTGGCTGCATCTTATTGACTTGATGATATCTTTTGATAAACGAATCAAGTCTCTAATAGAAAATTCTGGAATCTTGCTTTCACTTCAGGATGACGGGAACTTCTTAAAGGTTTCTTCTCTATCAGTTTTCAGTGATCGACCAGATTGGCTTGATTTATGGGCAGAGATGGAATTAAATGATATACTAGAAAAGTTGAAATCTGATGCTGGTGATGAGAGAAATTGGACTATGAAAGTCCAAGGAGCAGCTCTTTTATCTGATACTGAAGATCGATCAGATTGCATAGTCAAAGCACCTGCAATTTGTAGTGCCTATCTTCGGTGCCTATCATCTGTGGTTGATCGTTGTCGATCATTGCCTAGCATCTCTATGAGGTCTAGATTTCTCAGATTAGCTGGGGTACCTATTATACAAAACTTTTTGGAGAGCTTACTCATCAGGTGCCAAGAGGCTGAAGGTTTGACTGCCTTGACAGATGATGATGGCCTAGTTAAAGTTGCAAACTCCATTAATGCCGCTCGCTACATTGAATCTGTTTTAAAGGAATGGTGTGAGGACATCTTTTTCCTCGAGATTTGGTCAGGTCGGAGTGATCAACTTGGAATATCAGCAGGCGATCAAAGTGGTAATGTCGAGTCAGTGGAAGGTCTAGATAATGGTATTTTTCACGAGGAGGTTGTAAAGTTGGAGGCGTTTAGAATAGAATGGGCTGAAAAATTGTCTGTTGTTATATTGAGGGGATTTGAGGCTCAAAGTCGGGATTATATGAAGAACAGGAGGCAATGGCAAGAAAAGAGTGAGGATGGTTGGACAGTATCCAGATTTTTAGTTGGCGCTCTAGATTATTTGCAAGGTAAAATATCAGTGGTAGAAACTGATTTGAACGGGATAGACTTTGTTGGGGTGTGGAGAAGTTTGGCAGCTAGAATTGATCGATTGTTTTTCAGCGTTATTCTAATGAGCAATGTGAAGTTTTCTGACACGGGCGTCGAGAGGCTTGGTAGTGATTTGGAGGTTGTATTTGGGGCATTTCGGGCATGGTGTTTGAGGCCGGAGGGCTTTTTCCCCAAAGTAAGTGAAGGGTTGAAGCTGTTGAAGATGGAAGAAGAGAAACTTCGAAGCAGCTTGGCAAGAGGGGAGAAATGGATGAAGGAGAATGGGATTAGGAATTTGAGTGAAACAGAGGTAGAAAAGATTGTGAAGAGTAGAGTTTTTAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006888 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0019898 GO:0031090 GO:0031312 GO:0031984 GO:0033036 GO:0033365 GO:0034613 GO:0042175 GO:0042406 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RINT1_TIP1

Protein Analysis

894

Amino Acids

100.49

Weight (kDa)

6.05

Isoelectric Point (pI)

41.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RINT1_TIP1	PF04437	385 - 888	4.4e-39	RINT-1/TIP-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009457)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47700
fragaria_vesca	FvH4_5g15230 FvH4_5g15230 FvH4_5g15230
malus_domestica	MD06G1190600.v1.1 MD14G1197500.v1.1
prunus_persica	Prupe.5G189500_v2.0.a1
pyrus_communis	pycom06g16910 pycom14g16400
rosa_chinensis	RchiOBHm_Chr7g0180931
rosa_laevigata	RLG00000005224
rosa_multiflora	Rmu_co8437493.1_g000001 Rmu_sc0004056.1_g000008 Rmu_sc0028441.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272410
rosa_rugosa	Rorug06G0437700 Rorug06G0437700
rosa_samantha	Rh7AG039100 Rh7BG038400 Rh7CG040100 Rh7DG038500
rosa_wichuraiana	Rw7G003200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1762
AasI	GACNNNNNNGTC	2 cut(s)	370, 2444
Acc36I	ACCTGC	1 cut(s)	1762
Acc65I	GGTACC	1 cut(s)	1858
AccB1I	GGYRCC	3 cut(s)	1779, 1858, 1899
AccBSI	CCGCTC	3 cut(s)	354, 534, 1976
AccI	GTMKAC	2 cut(s)	1069, 1242
AccII	CGCG	1 cut(s)	1099
AccIII	TCCGGA	1 cut(s)	333
AclWI	GGATC	4 cut(s)	432, 445, 516, 529
AcoI	YGGCCR	3 cut(s)	603, 876, 935
AcsI	RAATTY	6 cut(s)	170, 212, 742, 1223, 1519, 2626
AcuI	CTGAAG	6 cut(s)	528, 789, 1011, 1526, 1743, 1932
AcyI	GRCGYC	1 cut(s)	2445
AfaI	GTAC	4 cut(s)	1040, 1322, 1435, 1860
AfiI	CCNNNNNNNGG	7 cut(s)	37, 38, 511, 829, 933, 977, 1776
AjnI	CCWGG	4 cut(s)	399, 927, 1253, 1457
Alw21I	GWGCWC	2 cut(s)	381, 874
Alw26I	GTCTC	7 cut(s)	118, 242, 316, 521, 641, 1017, 1512
AlwI	GGATC	4 cut(s)	432, 445, 516, 529
AlwNI	CAGNNNCTG	2 cut(s)	166, 650
Ama87I	CYCGRG	1 cut(s)	2027
Aor13HI	TCCGGA	1 cut(s)	333
AoxI	GGCC	7 cut(s)	153, 481, 603, 876, 935, 1942, 2507
ApeKI	GCWGC	6 cut(s)	42, 592, 1462, 1703, 2378, 2580
ApoI	RAATTY	6 cut(s)	170, 212, 742, 1223, 1519, 2626
ArsI	GACNNNNNNTTYG	4 cut(s)	244, 276, 442, 474
AseI	ATTAAT	1 cut(s)	1968
Asp718I	GGTACC	1 cut(s)	1858
AspLEI	GCGC	1 cut(s)	2294
AspS9I	GGNCC	3 cut(s)	233, 268, 336
AsuC2I	CCSGG	2 cut(s)	911, 1318
AsuHPI	GGTGA	6 cut(s)	407, 689, 899, 1127, 1162, 1679
AsuII	TTCGAA	1 cut(s)	2575
AvaI	CYCGRG	1 cut(s)	2027
AvaII	GGWCC	3 cut(s)	233, 268, 336
BaeGI	GKGCMC	3 cut(s)	94, 835, 916
BalI	TGGCCA	2 cut(s)	605, 937
BamHI	GGATCC	2 cut(s)	437, 521
BanI	GGYRCC	3 cut(s)	1779, 1858, 1899
BanII	GRGCYC	3 cut(s)	361, 381, 874
BauI	CACGAG	1 cut(s)	2126
Bbv12I	GWGCWC	2 cut(s)	381, 874
BbvI	GCAGC	6 cut(s)	54, 579, 1449, 1715, 2390, 2592
BccI	CCATC	6 cut(s)	542, 927, 1618, 1934, 2255, 2551
BceAI	ACGGC	3 cut(s)	168, 496, 863
BcgI	CGANNNNNNTGC	2 cut(s)	1719, 1753
BciT130I	CCWGG	4 cut(s)	401, 929, 1255, 1459
BciVI	GTATCC	1 cut(s)	2284
BclI	TGATCA	2 cut(s)	853, 2050
BcnI	CCSGG	2 cut(s)	911, 1318
BcoDI	GTCTC	7 cut(s)	118, 242, 316, 521, 641, 1017, 1512
BfaI	CTAG	9 cut(s)	1106, 1449, 1643, 1818, 1836, 1946, 2108, 2297, 2382
BfmI	CTRYAG	2 cut(s)	897, 1070
BfoI	RGCGCY	1 cut(s)	2295
BfuAI	ACCTGC	1 cut(s)	1762
BfuI	GTATCC	1 cut(s)	2284
BglI	GCCNNNNNGGC	2 cut(s)	489, 509
BisI	GCNGC	7 cut(s)	43, 593, 1463, 1704, 1974, 2379, 2581
BlsI	GCNGC	7 cut(s)	44, 594, 1464, 1705, 1975, 2380, 2582
BmcAI	AGTACT	1 cut(s)	1040
Bme1390I	CCNGG	6 cut(s)	401, 911, 929, 1255, 1318, 1459
Bme18I	GGWCC	3 cut(s)	233, 268, 336
BmeT110I	CYCGRG	1 cut(s)	2027
BmgT120I	GGNCC	3 cut(s)	233, 268, 336
BmiI	GGNNCC	6 cut(s)	360, 439, 523, 1781, 1860, 1901
BmrFI	CCNGG	6 cut(s)	401, 911, 929, 1255, 1318, 1459
BmrI	ACTGGG	1 cut(s)	382
BmsI	GCATC	6 cut(s)	679, 1005, 1193, 1474, 1651, 1830
BmuI	ACTGGG	1 cut(s)	382
BplI	GAGNNNNNCTC	2 cut(s)	343, 375
BpmI	CTGGAG	1 cut(s)	954
Bpu14I	TTCGAA	1 cut(s)	2575
BpuMI	CCSGG	2 cut(s)	911, 1318
Bsa29I	ATCGAT	2 cut(s)	1729, 2392
BsaHI	GRCGYC	1 cut(s)	2445
BsaI	GGTCTC	2 cut(s)	521, 1017
BsaJI	CCNNGG	8 cut(s)	32, 255, 478, 606, 927, 928, 1254, 1696
BsaWI	WCCGGW	3 cut(s)	230, 235, 333
BsaXI	ACNNNNNCTCC	4 cut(s)	185, 215, 265, 295
Bsc4I	CCNNNNNNNGG	7 cut(s)	37, 38, 511, 829, 933, 977, 1776
Bse118I	RCCGGY	1 cut(s)	595
Bse1I	ACTGG	3 cut(s)	388, 625, 1299
Bse3DI	GCAATG	4 cut(s)	1314, 1811, 2246, 2428
BseAI	TCCGGA	1 cut(s)	333
BseBI	CCWGG	4 cut(s)	401, 929, 1255, 1459
BseCI	ATCGAT	2 cut(s)	1729, 2392
BseDI	CCNNGG	8 cut(s)	32, 255, 478, 606, 927, 928, 1254, 1696
BseGI	GGATG	7 cut(s)	938, 1184, 1282, 1358, 1552, 2266, 2610
BseLI	CCNNNNNNNGG	7 cut(s)	37, 38, 511, 829, 933, 977, 1776
BseMI	GCAATG	4 cut(s)	1314, 1811, 2246, 2428
BseMII	CTCAG	3 cut(s)	341, 1451, 1858
BseNI	ACTGG	3 cut(s)	388, 625, 1299
BseRI	GAGGAG	2 cut(s)	602, 2144
BseSI	GKGCMC	3 cut(s)	94, 835, 916
BseXI	GCAGC	6 cut(s)	54, 579, 1449, 1715, 2390, 2592
BseYI	CCCAGC	1 cut(s)	1853
Bsh1236I	CGCG	1 cut(s)	1099
Bsh1285I	CGRYCG	2 cut(s)	309, 472
BshFI	GGCC	7 cut(s)	155, 483, 605, 878, 937, 1944, 2509
BshNI	GGYRCC	3 cut(s)	1779, 1858, 1899
BshVI	ATCGAT	2 cut(s)	1729, 2392
BsiEI	CGRYCG	2 cut(s)	309, 472
BsiHKAI	GWGCWC	2 cut(s)	381, 874
BsiHKCI	CYCGRG	1 cut(s)	2027
BsiSI	CCGG	7 cut(s)	231, 236, 334, 596, 910, 1317, 2510
BslI	CCNNNNNNNGG	7 cut(s)	37, 38, 511, 829, 933, 977, 1776
BsmAI	GTCTC	7 cut(s)	118, 242, 316, 521, 641, 1017, 1512
BsmBI	CGTCTC	2 cut(s)	242, 316
BsmI	GAATGC	1 cut(s)	727
BsnI	GGCC	7 cut(s)	155, 483, 605, 878, 937, 1944, 2509
Bso31I	GGTCTC	2 cut(s)	521, 1017
BsoBI	CYCGRG	1 cut(s)	2027
Bsp119I	TTCGAA	1 cut(s)	2575
Bsp1286I	GDGCHC	6 cut(s)	94, 361, 381, 835, 874, 916
Bsp13I	TCCGGA	1 cut(s)	333
Bsp19I	CCATGG	1 cut(s)	255
BspANI	GGCC	7 cut(s)	155, 483, 605, 878, 937, 1944, 2509
BspCNI	CTCAG	3 cut(s)	342, 1450, 1857
BspDI	ATCGAT	2 cut(s)	1729, 2392
BspEI	TCCGGA	1 cut(s)	333
BspFNI	CGCG	1 cut(s)	1099
BspLI	GGNNCC	6 cut(s)	360, 439, 523, 1781, 1860, 1901
BspMI	ACCTGC	1 cut(s)	1762
BspPI	GGATC	4 cut(s)	432, 445, 516, 529
BspQI	GCTCTTC	2 cut(s)	1137, 1152
BspT104I	TTCGAA	1 cut(s)	2575
BspT107I	GGYRCC	3 cut(s)	1779, 1858, 1899
BspTNI	GGTCTC	2 cut(s)	521, 1017
BsrBI	CCGCTC	3 cut(s)	354, 534, 1976
BsrDI	GCAATG	4 cut(s)	1314, 1811, 2246, 2428
BsrFI	RCCGGY	1 cut(s)	595
BsrI	ACTGG	3 cut(s)	388, 625, 1299
BssAI	RCCGGY	1 cut(s)	595
BssECI	CCNNGG	8 cut(s)	32, 255, 478, 606, 927, 928, 1254, 1696
BssNI	GRCGYC	1 cut(s)	2445
BssSI	CACGAG	1 cut(s)	2126
BssT1I	CCWWGG	4 cut(s)	32, 255, 606, 1696
Bst2BI	CACGAG	1 cut(s)	2126
Bst2UI	CCWGG	4 cut(s)	401, 929, 1255, 1459
Bst4CI	ACNGT	4 cut(s)	850, 1043, 1325, 2272
Bst6I	CTCTTC	4 cut(s)	1137, 1152, 2559, 2654
BstACI	GRCGYC	1 cut(s)	2445
BstAPI	GCANNNNNTGC	1 cut(s)	650
BstBI	TTCGAA	1 cut(s)	2575
BstC8I	GCNNGC	4 cut(s)	597, 1128, 1978, 2071
BstDEI	CTNAG	5 cut(s)	350, 487, 1375, 1437, 1844
BstDSI	CCRYGG	2 cut(s)	255, 478
BstEII	GGTNACC	1 cut(s)	395
BstF5I	GGATG	7 cut(s)	938, 1184, 1282, 1358, 1552, 2266, 2610
BstFNI	CGCG	1 cut(s)	1099
BstH2I	RGCGCY	1 cut(s)	2295
BstHHI	GCGC	1 cut(s)	2294
BstMAI	GTCTC	7 cut(s)	118, 242, 316, 521, 641, 1017, 1512
BstMCI	CGRYCG	2 cut(s)	309, 472
BstMWI	GCNNNNNNNGC	4 cut(s)	489, 509, 650, 2492
BstNI	CCWGG	4 cut(s)	401, 929, 1255, 1459
BstPI	GGTNACC	1 cut(s)	395
BstSCI	CCNGG	6 cut(s)	399, 909, 927, 1253, 1316, 1457
BstSFI	CTRYAG	2 cut(s)	897, 1070
BstSLI	GKGCMC	3 cut(s)	94, 835, 916
BstUI	CGCG	1 cut(s)	1099
BstV1I	GCAGC	6 cut(s)	54, 579, 1449, 1715, 2390, 2592
BstX2I	RGATCY	2 cut(s)	437, 521
BstXI	CCANNNNNNTGG	1 cut(s)	613
BstYI	RGATCY	2 cut(s)	437, 521
Bsu15I	ATCGAT	2 cut(s)	1729, 2392
BsuI	GTATCC	1 cut(s)	2284
BsuRI	GGCC	7 cut(s)	155, 483, 605, 878, 937, 1944, 2509
BsuTUI	ATCGAT	2 cut(s)	1729, 2392
BtgI	CCRYGG	2 cut(s)	255, 478
BtsCI	GGATG	7 cut(s)	938, 1184, 1282, 1358, 1552, 2266, 2610
BtsIMutI	CAGTG	5 cut(s)	395, 1292, 1594, 2103, 2328
BveI	ACCTGC	1 cut(s)	1762
Cac8I	GCNNGC	4 cut(s)	597, 1128, 1978, 2071
CaiI	CAGNNNCTG	2 cut(s)	166, 650
CfoI	GCGC	1 cut(s)	2294
Cfr10I	RCCGGY	1 cut(s)	595
Cfr13I	GGNCC	3 cut(s)	233, 268, 336
ClaI	ATCGAT	2 cut(s)	1729, 2392
CpoI	CGGWCCG	1 cut(s)	233
CseI	GACGC	3 cut(s)	746, 1088, 2434
Csp6I	GTAC	4 cut(s)	1039, 1321, 1434, 1859
CspI	CGGWCCG	1 cut(s)	233
CviAII	CATG	5 cut(s)	256, 706, 720, 893, 2496
CviQI	GTAC	4 cut(s)	1039, 1321, 1434, 1859
DdeI	CTNAG	5 cut(s)	350, 487, 1375, 1437, 1844
DraI	TTTAAA	1 cut(s)	1998
DrdI	GACNNNNNNGTC	2 cut(s)	370, 2444
DseDI	GACNNNNNNGTC	2 cut(s)	370, 2444
EaeI	YGGCCR	3 cut(s)	603, 876, 935
Eam1104I	CTCTTC	4 cut(s)	1137, 1152, 2559, 2654
EarI	CTCTTC	4 cut(s)	1137, 1152, 2559, 2654
EciI	GGCGGA	1 cut(s)	584
Ecl136II	GAGCTC	2 cut(s)	379, 872
Eco130I	CCWWGG	4 cut(s)	32, 255, 606, 1696
Eco24I	GRGCYC	3 cut(s)	361, 381, 874
Eco31I	GGTCTC	2 cut(s)	521, 1017
Eco32I	GATATC	1 cut(s)	1485
Eco47I	GGWCC	3 cut(s)	233, 268, 336
Eco53kI	GAGCTC	2 cut(s)	379, 872
Eco57I	CTGAAG	6 cut(s)	528, 789, 1011, 1526, 1743, 1932
Eco88I	CYCGRG	1 cut(s)	2027
Eco91I	GGTNACC	1 cut(s)	395
EcoICRI	GAGCTC	2 cut(s)	379, 872
EcoO65I	GGTNACC	1 cut(s)	395
EcoRI	GAATTC	1 cut(s)	742
EcoRII	CCWGG	4 cut(s)	399, 927, 1253, 1457
EcoRV	GATATC	1 cut(s)	1485
EcoT14I	CCWWGG	4 cut(s)	32, 255, 606, 1696
EcoT38I	GRGCYC	3 cut(s)	361, 381, 874
ErhI	CCWWGG	4 cut(s)	32, 255, 606, 1696
Esp3I	CGTCTC	2 cut(s)	242, 316
FaeI	CATG	5 cut(s)	259, 709, 723, 896, 2499
FalI	AAGNNNNNCTT	2 cut(s)	2556, 2588
FatI	CATG	5 cut(s)	255, 705, 719, 892, 2495
FauI	CCCGC	5 cut(s)	292, 306, 347, 505, 539
FbaI	TGATCA	2 cut(s)	853, 2050
FblI	GTMKAC	2 cut(s)	1069, 1242
Fnu4HI	GCNGC	7 cut(s)	43, 593, 1463, 1704, 1974, 2379, 2581
FokI	GGATG	7 cut(s)	945, 1171, 1289, 1345, 1559, 2273, 2617
FriOI	GRGCYC	3 cut(s)	361, 381, 874
Fsp4HI	GCNGC	7 cut(s)	43, 593, 1463, 1704, 1974, 2379, 2581
FspBI	CTAG	9 cut(s)	1106, 1449, 1643, 1818, 1836, 1946, 2108, 2297, 2382
GlaI	GCGC	1 cut(s)	2293
GluI	GCNGC	7 cut(s)	43, 593, 1463, 1704, 1974, 2379, 2581
GsaI	CCCAGC	1 cut(s)	1857
GsuI	CTGGAG	1 cut(s)	954
HaeII	RGCGCY	1 cut(s)	2295
HaeIII	GGCC	7 cut(s)	155, 483, 605, 878, 937, 1944, 2509
HapII	CCGG	7 cut(s)	231, 236, 334, 596, 910, 1317, 2510
HgaI	GACGC	3 cut(s)	746, 1088, 2434
HhaI	GCGC	1 cut(s)	2294
Hin1I	GRCGYC	1 cut(s)	2445
Hin1II	CATG	5 cut(s)	259, 709, 723, 896, 2499
Hin6I	GCGC	1 cut(s)	2292
HinP1I	GCGC	1 cut(s)	2292
HincII	GTYRAC	4 cut(s)	846, 1103, 1267, 1314
HindII	GTYRAC	4 cut(s)	846, 1103, 1267, 1314
HindIII	AAGCTT	1 cut(s)	659
HpaI	GTTAAC	1 cut(s)	1314
HpaII	CCGG	7 cut(s)	231, 236, 334, 596, 910, 1317, 2510
HphI	GGTGA	6 cut(s)	407, 689, 899, 1127, 1162, 1679
Hpy166II	GTNNAC	7 cut(s)	478, 846, 1070, 1103, 1243, 1267, 1314
Hpy8I	GTNNAC	7 cut(s)	478, 846, 1070, 1103, 1243, 1267, 1314
Hpy99I	CGWCG	2 cut(s)	326, 2450
HpyAV	CCTTC	6 cut(s)	74, 325, 1907, 2096, 2531, 2602
HpyCH4III	ACNGT	4 cut(s)	850, 1043, 1325, 2272
HpyCH4V	TGCA	9 cut(s)	1018, 1081, 1288, 1329, 1465, 1740, 1757, 1958, 2308
HpyF10VI	GCNNNNNNNGC	4 cut(s)	489, 509, 650, 2492
HpyF3I	CTNAG	5 cut(s)	350, 487, 1375, 1437, 1844
Hsp92I	GRCGYC	1 cut(s)	2445
Hsp92II	CATG	5 cut(s)	259, 709, 723, 896, 2499
HspAI	GCGC	1 cut(s)	2292
Kpn2I	TCCGGA	1 cut(s)	333
KpnI	GGTACC	1 cut(s)	1862
KroI	GCCGGC	1 cut(s)	595
KroNI	GCCGGC	1 cut(s)	597
Ksp22I	TGATCA	2 cut(s)	853, 2050
KspAI	GTTAAC	1 cut(s)	1314
LguI	GCTCTTC	2 cut(s)	1137, 1152
LmnI	GCTCC	7 cut(s)	206, 364, 376, 384, 571, 589, 1700
Lsp1109I	GCAGC	6 cut(s)	54, 579, 1449, 1715, 2390, 2592
LweI	GCATC	6 cut(s)	679, 1005, 1193, 1474, 1651, 1830
MaeI	CTAG	9 cut(s)	1106, 1449, 1643, 1818, 1836, 1946, 2108, 2297, 2382
MaeIII	GTNAC	4 cut(s)	395, 808, 1426, 1440
MbiI	CCGCTC	3 cut(s)	354, 534, 1976
MflI	RGATCY	2 cut(s)	437, 521
MhlI	GDGCHC	6 cut(s)	94, 361, 381, 835, 874, 916
MlsI	TGGCCA	2 cut(s)	605, 937
MluNI	TGGCCA	2 cut(s)	605, 937
MlyI	GAGTC	5 cut(s)	358, 483, 630, 1262, 2102
MmeI	TCCRAC	6 cut(s)	315, 354, 386, 2024, 2124, 2246
Mox20I	TGGCCA	2 cut(s)	605, 937
MroI	TCCGGA	1 cut(s)	333
MroNI	GCCGGC	1 cut(s)	595
MscI	TGGCCA	2 cut(s)	605, 937
MslI	CAYNNNNRTG	1 cut(s)	1826
Msp20I	TGGCCA	2 cut(s)	605, 937
MspI	CCGG	7 cut(s)	231, 236, 334, 596, 910, 1317, 2510
MspR9I	CCNGG	6 cut(s)	401, 911, 929, 1255, 1318, 1459
Mva1269I	GAATGC	1 cut(s)	727
MvaI	CCWGG	4 cut(s)	401, 929, 1255, 1459
MvnI	CGCG	1 cut(s)	1099
MwoI	GCNNNNNNNGC	4 cut(s)	489, 509, 650, 2492
NaeI	GCCGGC	1 cut(s)	597
NciI	CCSGG	2 cut(s)	911, 1318
NcoI	CCATGG	1 cut(s)	255
NgoMIV	GCCGGC	1 cut(s)	595
NlaIII	CATG	5 cut(s)	259, 709, 723, 896, 2499
NlaIV	GGNNCC	6 cut(s)	360, 439, 523, 1781, 1860, 1901
NmuCI	GTSAC	2 cut(s)	395, 1440
NspV	TTCGAA	1 cut(s)	2575
PaeR7I	CTCGAG	1 cut(s)	2027
PaqCI	CACCTGC	1 cut(s)	1762
PasI	CCCWGGG	1 cut(s)	928
PciSI	GCTCTTC	2 cut(s)	1137, 1152
PctI	GAATGC	1 cut(s)	727
PdiI	GCCGGC	1 cut(s)	597
PfeI	GAWTC	8 cut(s)	100, 260, 424, 1000, 1168, 1500, 1527, 1988
PkrI	GCNGC	7 cut(s)	44, 594, 1464, 1705, 1975, 2380, 2582
Ple19I	CGATCG	2 cut(s)	309, 472
PleI	GAGTC	5 cut(s)	358, 482, 629, 1262, 2101
PpsI	GAGTC	5 cut(s)	358, 482, 629, 1262, 2101
PshBI	ATTAAT	1 cut(s)	1968
Psp124BI	GAGCTC	2 cut(s)	381, 874
Psp6I	CCWGG	4 cut(s)	399, 927, 1253, 1457
PspEI	GGTNACC	1 cut(s)	395
PspFI	CCCAGC	1 cut(s)	1853
PspGI	CCWGG	4 cut(s)	399, 927, 1253, 1457
PspN4I	GGNNCC	6 cut(s)	360, 439, 523, 1781, 1860, 1901
PspPI	GGNCC	3 cut(s)	233, 268, 336
PstNI	CAGNNNCTG	2 cut(s)	166, 650
PsuI	RGATCY	2 cut(s)	437, 521
PvuI	CGATCG	2 cut(s)	309, 472
RsaI	GTAC	4 cut(s)	1040, 1322, 1435, 1860
RsaNI	GTAC	4 cut(s)	1039, 1321, 1434, 1859
RseI	CAYNNNNRTG	1 cut(s)	1826
Rsr2I	CGGWCCG	1 cut(s)	233
RsrII	CGGWCCG	1 cut(s)	233
SacI	GAGCTC	2 cut(s)	381, 874
SapI	GCTCTTC	2 cut(s)	1137, 1152
SatI	GCNGC	7 cut(s)	43, 593, 1463, 1704, 1974, 2379, 2581
Sau96I	GGNCC	3 cut(s)	233, 268, 336
ScaI	AGTACT	1 cut(s)	1040
SchI	GAGTC	5 cut(s)	358, 483, 630, 1262, 2102
ScrFI	CCNGG	6 cut(s)	401, 911, 929, 1255, 1318, 1459
SduI	GDGCHC	6 cut(s)	94, 361, 381, 835, 874, 916
SfaNI	GCATC	6 cut(s)	679, 1005, 1193, 1474, 1651, 1830
SfcI	CTRYAG	2 cut(s)	897, 1070
Sfr274I	CTCGAG	1 cut(s)	2027
SfuI	TTCGAA	1 cut(s)	2575
SinI	GGWCC	3 cut(s)	233, 268, 336
SlaI	CTCGAG	1 cut(s)	2027
SmiMI	CAYNNNNRTG	1 cut(s)	1826
SmlI	CTYRAG	1 cut(s)	2027
SmoI	CTYRAG	1 cut(s)	2027
SspMI	CTAG	9 cut(s)	1106, 1449, 1643, 1818, 1836, 1946, 2108, 2297, 2382
SstI	GAGCTC	2 cut(s)	381, 874
StyD4I	CCNGG	6 cut(s)	399, 909, 927, 1253, 1316, 1457
StyI	CCWWGG	4 cut(s)	32, 255, 606, 1696
TaaI	ACNGT	4 cut(s)	850, 1043, 1325, 2272
TatI	WGTACW	1 cut(s)	1038
TauI	GCSGC	1 cut(s)	1976
TfiI	GAWTC	8 cut(s)	100, 260, 424, 1000, 1168, 1500, 1527, 1988
TscAI	CASTG	5 cut(s)	395, 1299, 1594, 2103, 2328
TseFI	GTSAC	2 cut(s)	395, 1440
TseI	GCWGC	6 cut(s)	42, 592, 1462, 1703, 2378, 2580
Tsp45I	GTSAC	2 cut(s)	395, 1440
TspDTI	ATGAA	9 cut(s)	17, 357, 722, 1293, 1317, 1431, 1703, 2240, 2621
TspGWI	ACGGA	1 cut(s)	619
TspRI	CASTG	5 cut(s)	395, 1299, 1594, 2103, 2328
VpaK11BI	GGWCC	3 cut(s)	233, 268, 336
VspI	ATTAAT	1 cut(s)	1968
XapI	RAATTY	6 cut(s)	170, 212, 742, 1223, 1519, 2626
XbaI	TCTAGA	3 cut(s)	1835, 2107, 2296
XhoI	CTCGAG	1 cut(s)	2027
XmiI	GTMKAC	2 cut(s)	1069, 1242
XspI	CTAG	9 cut(s)	1106, 1449, 1643, 1818, 1836, 1946, 2108, 2297, 2382
ZrmI	AGTACT	1 cut(s)	1040

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.