Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0009457

Physical Location & Seq

Genomic Coordinates Forward (+)

28758656 .. 28763273

Gene Structure 4618 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1197500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGACTCGGCGGTCCAGACCTTCCCTCCAGCATCCGACCTCCCGCCCTCGGTCGTCTCCTTCCTCGACGACAAGTTTCGGACCAATGAAAATCTGAGCGGGGCTCCGACTCTGCTGTCGGAGCTCCAAGCCCAGTGCGGCGACCTGGACCGAACCCTAATCGACCTGAATCGGAGCCTCGGATCCTCGCTTCTAACTTACGCTTCGTTCTCCGATCGAGTCCACGGCCTCTTAGGCGGCATCAATGCCCAATTGACGGGTCTCGGATCCTCCACCCGCTCTCGCACTTCAGATGGAGAAGGAAAGGAGAGGGCGGAGCAGATATTGGGGGAGGAGCTACCGGCGTTGGCCAAGGAAGTGGCGAGAGTTGAGTCGGTTCGAACATACGCAGAGACTGCATTGAAGCTTCAAACTATGATTGGTGATATTGAAGATGCTGTATCTTCTACCATGAAGAAAAACTCGTGGAAACATTCAGCAAGACAGAATTCAGAAGAAATGCGTCTGGGTGCTATTAAAACTCTTAAGTTGATAGAAGATGTTTTAACTTCAGTTACAAAGACACGCCCTCAATGGGCACATCTTGTGTCAGCAGTTGATCACAGAGTAGATCGAGCTCTGGCTGTTTTAAGACCTCATGCTATAGCAGATCACCGGGCCCTGCTTGCTTCCCTTGGATGGCCACCGCCTCTTGCCACTTTGAGTTCCTCAACTCCAGATACAGGGAGATCAACTGAAGTTCTGAATCCTCTTTTCACGATGCAAGGAGACCTCAAAGACCAGTACTGTGAAAACTTTTTAGCCTTGTGCGGCCTCCAGGAGTTGCAGAGACGAAGAAAATCGCGTCAACTAGACGGCTATAATCGTGAACTTGCTCTTCACCAACCACTTTGGGTGATTGAAGAGCTTGTAAATCCTATATCATTAGCATCGCAACGCCATTTCACAAAATGGGTTGACAAGCCAGAATTCATATTTGCTCTAGTCTACAAGACCACCAGGGATTATGTTGACTCTATGGATGAATTATTGCAACCACTGGTTGATGAAGCAATGTTAACAGGGTACAGTTGCAGAGAAGAATGGATTTCAGCAATGGTATCATCCTTATCAACTTACTTAGCAAAAGAGATATTCCCAAATTATGCTGGACAACCAGATGAAGATAGTGTAACGGGTACTCAGTCACAGGCTAGAACATCCTGGCTGCATCTTATTGACTTGATGATATCTTTTGATAAACGAATCAAGTCTCTGATAGAAAATTCTGGAATCTTGCTTTCACTTCAGGATGATGGGAACTTCTTAAAGGTTTCTTCTCTATCCATTTTCAGTGATCGACCAGATTGGCTTGATTTATGGGTAGAGATAGAATTAAATGATATACTAGAGAAGTTGAAACCTGATACTGGTGATGAGAGAAACTGGACCATGAAAGTCCAAGGAGCAGCTCTTTTATCTGATGCTGAAGATCACAAAGCTCCTGCAATTTGTAGTGCCTATCTTCGGTGTTTATCATCTGTGGTTGATCATTGTCGTTCATTGCCTAGCATCTCTATGAGGTCTAGGTTTCTGAGATTAGCCGGGATGCCAGAAGCTGAAGGTCTGACTGCCTTGACCGATGATGATGGCCTAGTTAAAGTTGCAAACTCCATTAATGCCGCTCGCTACTTTGAATCTGTTTTAAAGGAATGGTGTGAGGATGTCTTTTTCCTTGAGATATGGTCAGGTCAAAGTGATCAACCGGGAGAATCCACTGATGATCAAAATGGTAATGTCAAGACAACGGAAGGTCTTGAAAGTGGTATTTTTCACGAGGAGATTGTAAAGTTGGAGAAGTTTAGAATAGAGTGGGCTGAAAAGTTGTCTGTTGTTATATTGAGGGGATTTGTTGCTCAATGTCGAGATTATACGAAGAACAGGAGGCAGTGGCAAGAAAAGAGTGAGGATGGTTGGACAGTATCCAGATTTTTAGTTGGTGCTCTAGATTATTTGCAAGGTAAGATATCAGTTGTGGAAGCTGATTTGAATGGGATAGACTTTGTCAGGGTGTGGAGAAGTTTGGCAGCTGGGATTGATCGATTGTTTTTCAGCAGTATTCTAATGAGCAATGTTAAGTTTTATGATAGCGGAGTTGAGAGGTTTGGTAGTGATTTGGAGGTTTTATTTGGGGCATTTCGGGCTTGGTGTTTGAGGCCGGAGAGCTTTTTCCCCAGAGTAAGTGAAGGCTTGAAGGTGTTAAAGATGGAAGAAGAAAAACTTCAAAGTAGTTTGGCAAGAGGGGAGAAATGGATGAAGGAGAATGGGATTAGACATTTGAGTGAAACAGAGGTAGAAAAGATTGTGAAGAGTAGAGTTTTTACGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006888 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0019898 GO:0031090 GO:0031312 GO:0031984 GO:0033036 GO:0033365 GO:0034613 GO:0042175 GO:0042406 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RINT1_TIP1

Protein Analysis

790

Amino Acids

88.71

Weight (kDa)

5.17

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RINT1_TIP1	PF04437	300 - 526	1.2e-06	RINT-1/TIP-1 family
RINT1_TIP1	PF04437	537 - 784	4.9e-30	RINT-1/TIP-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009457)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47700
fragaria_vesca	FvH4_5g15230 FvH4_5g15230 FvH4_5g15230
malus_domestica	MD06G1190600.v1.1 MD14G1197500.v1.1
prunus_persica	Prupe.5G189500_v2.0.a1
pyrus_communis	pycom06g16910 pycom14g16400
rosa_chinensis	RchiOBHm_Chr7g0180931
rosa_laevigata	RLG00000005224
rosa_multiflora	Rmu_co8437493.1_g000001 Rmu_sc0004056.1_g000008 Rmu_sc0028441.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272410
rosa_rugosa	Rorug06G0437700 Rorug06G0437700
rosa_samantha	Rh7AG039100 Rh7BG038400 Rh7CG040100 Rh7DG038500
rosa_wichuraiana	Rw7G003200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	11, 115
AccBSI	CCGCTC	3 cut(s)	99, 279, 1664
AccI	GTMKAC	1 cut(s)	987
AccII	CGCG	1 cut(s)	844
AclWI	GGATC	4 cut(s)	177, 190, 261, 274
AcoI	YGGCCR	2 cut(s)	348, 680
AcsI	RAATTY	3 cut(s)	487, 968, 1264
AcuI	CTGAAG	6 cut(s)	273, 534, 756, 1271, 1488, 1620
AfaI	GTAC	3 cut(s)	785, 1067, 1180
AfiI	CCNNNNNNNGG	7 cut(s)	49, 256, 574, 678, 722, 1409, 1506
AflII	CTTAAG	1 cut(s)	524
AjnI	CCWGG	4 cut(s)	144, 816, 998, 1202
Alw21I	GWGCWC	3 cut(s)	126, 619, 1984
Alw26I	GTCTC	6 cut(s)	61, 266, 386, 762, 823, 1257
AlwI	GGATC	4 cut(s)	177, 190, 261, 274
AlwNI	CAGNNNCTG	2 cut(s)	395, 1598
AoxI	GGCC	7 cut(s)	226, 348, 657, 680, 811, 1630, 2195
ApaI	GGGCCC	1 cut(s)	661
ApeKI	GCWGC	3 cut(s)	1207, 1448, 2066
ApoI	RAATTY	3 cut(s)	487, 968, 1264
AseI	ATTAAT	1 cut(s)	1656
Asp700I	GAANNNNTTC	1 cut(s)	2259
AspS9I	GGNCC	6 cut(s)	13, 81, 148, 657, 658, 1428
AsuC2I	CCSGG	3 cut(s)	656, 1585, 1746
AsuHPI	GGTGA	5 cut(s)	434, 644, 872, 907, 1424
AsuII	TTCGAA	1 cut(s)	379
AvaII	GGWCC	4 cut(s)	13, 81, 148, 1428
BaeGI	GKGCMC	2 cut(s)	580, 661
BalI	TGGCCA	2 cut(s)	350, 682
BamHI	GGATCC	2 cut(s)	182, 266
BanII	GRGCYC	4 cut(s)	106, 126, 619, 661
BauI	CACGAG	2 cut(s)	463, 1814
Bbv12I	GWGCWC	3 cut(s)	126, 619, 1984
BbvI	GCAGC	3 cut(s)	1194, 1460, 2078
BccI	CCATC	6 cut(s)	287, 672, 1289, 1622, 1943, 2239
BceAI	ACGGC	2 cut(s)	241, 871
BciT130I	CCWGG	4 cut(s)	146, 818, 1000, 1204
BciVI	GTATCC	1 cut(s)	1972
BclI	TGATCA	4 cut(s)	598, 1528, 1738, 1762
BcnI	CCSGG	3 cut(s)	656, 1585, 1746
BcoDI	GTCTC	6 cut(s)	61, 266, 386, 762, 823, 1257
BfaI	CTAG	8 cut(s)	851, 983, 1194, 1388, 1548, 1566, 1634, 1985
BfmI	CTRYAG	1 cut(s)	642
BfrI	CTTAAG	1 cut(s)	524
BfuI	GTATCC	1 cut(s)	1972
BglI	GCCNNNNNGGC	1 cut(s)	234
BisI	GCNGC	7 cut(s)	139, 238, 811, 1208, 1449, 1662, 2067
BlsI	GCNGC	7 cut(s)	140, 239, 812, 1209, 1450, 1663, 2068
BmcAI	AGTACT	1 cut(s)	785
Bme1390I	CCNGG	7 cut(s)	146, 656, 818, 1000, 1204, 1585, 1746
Bme18I	GGWCC	4 cut(s)	13, 81, 148, 1428
BmgT120I	GGNCC	6 cut(s)	13, 81, 148, 657, 658, 1428
BmiI	GGNNCC	5 cut(s)	105, 176, 184, 268, 659
BmrFI	CCNGG	7 cut(s)	146, 656, 818, 1000, 1204, 1585, 1746
BmrI	ACTGGG	1 cut(s)	127
BmsI	GCATC	9 cut(s)	41, 249, 424, 750, 938, 1219, 1453, 1560, 1578
BmuI	ACTGGG	1 cut(s)	127
BplI	GAGNNNNNCTC	2 cut(s)	88, 120
BpmI	CTGGAG	3 cut(s)	12, 699, 800
Bpu14I	TTCGAA	1 cut(s)	379
BpuEI	CTTGAG	1 cut(s)	1736
BpuMI	CCSGG	3 cut(s)	656, 1585, 1746
Bsa29I	ATCGAT	1 cut(s)	2080
BsaI	GGTCTC	2 cut(s)	266, 762
BsaJI	CCNNGG	7 cut(s)	48, 178, 223, 351, 673, 999, 1441
BsaXI	ACNNNNNCTCC	2 cut(s)	10, 40
Bsc4I	CCNNNNNNNGG	7 cut(s)	49, 256, 574, 678, 722, 1409, 1506
Bse118I	RCCGGY	1 cut(s)	340
Bse1I	ACTGG	5 cut(s)	133, 781, 1044, 1414, 1430
Bse3DI	GCAATG	4 cut(s)	1059, 1101, 1541, 2116
BseBI	CCWGG	4 cut(s)	146, 818, 1000, 1204
BseCI	ATCGAT	1 cut(s)	2080
BseDI	CCNNGG	7 cut(s)	48, 178, 223, 351, 673, 999, 1441
BseLI	CCNNNNNNNGG	7 cut(s)	49, 256, 574, 678, 722, 1409, 1506
BseMI	GCAATG	4 cut(s)	1059, 1101, 1541, 2116
BseMII	CTCAG	3 cut(s)	86, 1196, 1565
BseNI	ACTGG	5 cut(s)	133, 781, 1044, 1414, 1430
BseRI	GAGGAG	2 cut(s)	347, 1832
BseSI	GKGCMC	2 cut(s)	580, 661
BseXI	GCAGC	3 cut(s)	1194, 1460, 2078
BseYI	CCCAGC	1 cut(s)	2069
Bsh1236I	CGCG	1 cut(s)	844
Bsh1285I	CGRYCG	2 cut(s)	54, 217
BshFI	GGCC	7 cut(s)	228, 350, 659, 682, 813, 1632, 2197
BshVI	ATCGAT	1 cut(s)	2080
BsiEI	CGRYCG	2 cut(s)	54, 217
BsiHKAI	GWGCWC	3 cut(s)	126, 619, 1984
BsiSI	CCGG	5 cut(s)	341, 655, 1584, 1745, 2198
BslI	CCNNNNNNNGG	7 cut(s)	49, 256, 574, 678, 722, 1409, 1506
BsmAI	GTCTC	6 cut(s)	61, 266, 386, 762, 823, 1257
BsmBI	CGTCTC	2 cut(s)	61, 823
BsnI	GGCC	7 cut(s)	228, 350, 659, 682, 813, 1632, 2197
Bso31I	GGTCTC	2 cut(s)	266, 762
Bsp119I	TTCGAA	1 cut(s)	379
Bsp120I	GGGCCC	1 cut(s)	657
Bsp1286I	GDGCHC	6 cut(s)	106, 126, 580, 619, 661, 1984
BspANI	GGCC	7 cut(s)	228, 350, 659, 682, 813, 1632, 2197
BspCNI	CTCAG	3 cut(s)	87, 1195, 1566
BspDI	ATCGAT	1 cut(s)	2080
BspFNI	CGCG	1 cut(s)	844
BspLI	GGNNCC	5 cut(s)	105, 176, 184, 268, 659
BspPI	GGATC	4 cut(s)	177, 190, 261, 274
BspQI	GCTCTTC	2 cut(s)	882, 897
BspT104I	TTCGAA	1 cut(s)	379
BspTI	CTTAAG	1 cut(s)	524
BspTNI	GGTCTC	2 cut(s)	266, 762
BsrBI	CCGCTC	3 cut(s)	99, 279, 1664
BsrDI	GCAATG	4 cut(s)	1059, 1101, 1541, 2116
BsrFI	RCCGGY	1 cut(s)	340
BsrI	ACTGG	5 cut(s)	133, 781, 1044, 1414, 1430
BssAI	RCCGGY	1 cut(s)	340
BssECI	CCNNGG	7 cut(s)	48, 178, 223, 351, 673, 999, 1441
BssSI	CACGAG	2 cut(s)	463, 1814
BssT1I	CCWWGG	3 cut(s)	351, 673, 1441
Bst2BI	CACGAG	2 cut(s)	463, 1814
Bst2UI	CCWGG	4 cut(s)	146, 818, 1000, 1204
Bst4CI	ACNGT	3 cut(s)	788, 1070, 1960
Bst6I	CTCTTC	3 cut(s)	882, 897, 2342
BstAFI	CTTAAG	1 cut(s)	524
BstAPI	GCANNNNNTGC	1 cut(s)	395
BstBI	TTCGAA	1 cut(s)	379
BstC8I	GCNNGC	2 cut(s)	666, 1666
BstDEI	CTNAG	5 cut(s)	95, 232, 1120, 1182, 1574
BstDSI	CCRYGG	1 cut(s)	223
BstFNI	CGCG	1 cut(s)	844
BstMAI	GTCTC	6 cut(s)	61, 266, 386, 762, 823, 1257
BstMCI	CGRYCG	2 cut(s)	54, 217
BstMWI	GCNNNNNNNGC	5 cut(s)	121, 234, 395, 665, 2180
BstNI	CCWGG	4 cut(s)	146, 818, 1000, 1204
BstSCI	CCNGG	7 cut(s)	144, 654, 816, 998, 1202, 1583, 1744
BstSFI	CTRYAG	1 cut(s)	642
BstSLI	GKGCMC	2 cut(s)	580, 661
BstUI	CGCG	1 cut(s)	844
BstV1I	GCAGC	3 cut(s)	1194, 1460, 2078
BstX2I	RGATCY	2 cut(s)	182, 266
BstXI	CCANNNNNNTGG	1 cut(s)	358
BstYI	RGATCY	2 cut(s)	182, 266
Bsu15I	ATCGAT	1 cut(s)	2080
BsuI	GTATCC	1 cut(s)	1972
BsuRI	GGCC	7 cut(s)	228, 350, 659, 682, 813, 1632, 2197
BsuTUI	ATCGAT	1 cut(s)	2080
BtgI	CCRYGG	1 cut(s)	223
BtgZI	GCGATG	1 cut(s)	915
BtsI	GCAGTG	1 cut(s)	1934
BtsIMutI	CAGTG	5 cut(s)	140, 1037, 1339, 1755, 1934
Cac8I	GCNNGC	2 cut(s)	666, 1666
CaiI	CAGNNNCTG	2 cut(s)	395, 1598
Cfr10I	RCCGGY	1 cut(s)	340
Cfr13I	GGNCC	6 cut(s)	13, 81, 148, 657, 658, 1428
ClaI	ATCGAT	1 cut(s)	2080
CseI	GACGC	2 cut(s)	491, 833
Csp6I	GTAC	3 cut(s)	784, 1066, 1179
CviAII	CATG	3 cut(s)	451, 638, 1432
CviQI	GTAC	3 cut(s)	784, 1066, 1179
DdeI	CTNAG	5 cut(s)	95, 232, 1120, 1182, 1574
DraI	TTTAAA	1 cut(s)	1686
DrdI	GACNNNNNNGTC	2 cut(s)	11, 115
DseDI	GACNNNNNNGTC	2 cut(s)	11, 115
EaeI	YGGCCR	2 cut(s)	348, 680
Eam1104I	CTCTTC	3 cut(s)	882, 897, 2342
EarI	CTCTTC	3 cut(s)	882, 897, 2342
EciI	GGCGGA	1 cut(s)	329
Ecl136II	GAGCTC	2 cut(s)	124, 617
Eco130I	CCWWGG	3 cut(s)	351, 673, 1441
Eco24I	GRGCYC	4 cut(s)	106, 126, 619, 661
Eco31I	GGTCTC	2 cut(s)	266, 762
Eco32I	GATATC	2 cut(s)	1230, 2007
Eco47I	GGWCC	4 cut(s)	13, 81, 148, 1428
Eco53kI	GAGCTC	2 cut(s)	124, 617
Eco57I	CTGAAG	6 cut(s)	273, 534, 756, 1271, 1488, 1620
EcoICRI	GAGCTC	2 cut(s)	124, 617
EcoO109I	RGGNCCY	1 cut(s)	658
EcoRI	GAATTC	2 cut(s)	487, 968
EcoRII	CCWGG	4 cut(s)	144, 816, 998, 1202
EcoRV	GATATC	2 cut(s)	1230, 2007
EcoT14I	CCWWGG	3 cut(s)	351, 673, 1441
EcoT38I	GRGCYC	4 cut(s)	106, 126, 619, 661
ErhI	CCWWGG	3 cut(s)	351, 673, 1441
Esp3I	CGTCTC	2 cut(s)	61, 823
FaeI	CATG	3 cut(s)	454, 641, 1435
FalI	AAGNNNNNCTT	2 cut(s)	2244, 2276
FatI	CATG	3 cut(s)	450, 637, 1431
FauI	CCCGC	3 cut(s)	51, 92, 284
FbaI	TGATCA	4 cut(s)	598, 1528, 1738, 1762
FblI	GTMKAC	1 cut(s)	987
Fnu4HI	GCNGC	7 cut(s)	139, 238, 811, 1208, 1449, 1662, 2067
FriOI	GRGCYC	4 cut(s)	106, 126, 619, 661
Fsp4HI	GCNGC	7 cut(s)	139, 238, 811, 1208, 1449, 1662, 2067
FspBI	CTAG	8 cut(s)	851, 983, 1194, 1388, 1548, 1566, 1634, 1985
GluI	GCNGC	7 cut(s)	139, 238, 811, 1208, 1449, 1662, 2067
GsaI	CCCAGC	1 cut(s)	2073
GsuI	CTGGAG	3 cut(s)	12, 699, 800
HaeIII	GGCC	7 cut(s)	228, 350, 659, 682, 813, 1632, 2197
HapII	CCGG	5 cut(s)	341, 655, 1584, 1745, 2198
HgaI	GACGC	2 cut(s)	491, 833
Hin1II	CATG	3 cut(s)	454, 641, 1435
HincII	GTYRAC	4 cut(s)	848, 958, 1012, 1059
HindII	GTYRAC	4 cut(s)	848, 958, 1012, 1059
HindIII	AAGCTT	1 cut(s)	404
HpaI	GTTAAC	1 cut(s)	1059
HpaII	CCGG	5 cut(s)	341, 655, 1584, 1745, 2198
HphI	GGTGA	5 cut(s)	434, 644, 872, 907, 1424
Hpy166II	GTNNAC	7 cut(s)	223, 848, 869, 958, 988, 1012, 1059
Hpy8I	GTNNAC	7 cut(s)	223, 848, 869, 958, 988, 1012, 1059
Hpy99I	CGWCG	1 cut(s)	71
HpyAV	CCTTC	8 cut(s)	31, 70, 293, 1595, 1784, 2219, 2227, 2290
HpyCH4III	ACNGT	3 cut(s)	788, 1070, 1960
HpyCH4V	TGCA	9 cut(s)	398, 763, 826, 1033, 1074, 1210, 1487, 1646, 1996
HpyF10VI	GCNNNNNNNGC	5 cut(s)	121, 234, 395, 665, 2180
HpyF3I	CTNAG	5 cut(s)	95, 232, 1120, 1182, 1574
Hsp92II	CATG	3 cut(s)	454, 641, 1435
Ksp22I	TGATCA	4 cut(s)	598, 1528, 1738, 1762
KspAI	GTTAAC	1 cut(s)	1059
LguI	GCTCTTC	2 cut(s)	882, 897
LmnI	GCTCC	8 cut(s)	109, 121, 129, 174, 316, 334, 1445, 1486
Lsp1109I	GCAGC	3 cut(s)	1194, 1460, 2078
LweI	GCATC	9 cut(s)	41, 249, 424, 750, 938, 1219, 1453, 1560, 1578
MaeI	CTAG	8 cut(s)	851, 983, 1194, 1388, 1548, 1566, 1634, 1985
MaeIII	GTNAC	3 cut(s)	553, 1171, 1185
MbiI	CCGCTC	3 cut(s)	99, 279, 1664
MfeI	CAATTG	1 cut(s)	251
MflI	RGATCY	2 cut(s)	182, 266
MhlI	GDGCHC	6 cut(s)	106, 126, 580, 619, 661, 1984
MlsI	TGGCCA	2 cut(s)	350, 682
MluCI	AATT	8 cut(s)	251, 487, 968, 1025, 1141, 1264, 1373, 1488
MluNI	TGGCCA	2 cut(s)	350, 682
MlyI	GAGTC	4 cut(s)	103, 228, 380, 1007
MmeI	TCCRAC	5 cut(s)	60, 99, 131, 1812, 1934
Mox20I	TGGCCA	2 cut(s)	350, 682
MroXI	GAANNNNTTC	1 cut(s)	2259
MscI	TGGCCA	2 cut(s)	350, 682
MslI	CAYNNNNRTG	2 cut(s)	1556, 2319
Msp20I	TGGCCA	2 cut(s)	350, 682
MspA1I	CMGCKG	1 cut(s)	2069
MspCI	CTTAAG	1 cut(s)	524
MspI	CCGG	5 cut(s)	341, 655, 1584, 1745, 2198
MspR9I	CCNGG	7 cut(s)	146, 656, 818, 1000, 1204, 1585, 1746
MunI	CAATTG	1 cut(s)	251
MvaI	CCWGG	4 cut(s)	146, 818, 1000, 1204
MvnI	CGCG	1 cut(s)	844
MwoI	GCNNNNNNNGC	5 cut(s)	121, 234, 395, 665, 2180
NciI	CCSGG	3 cut(s)	656, 1585, 1746
NlaIII	CATG	3 cut(s)	454, 641, 1435
NlaIV	GGNNCC	5 cut(s)	105, 176, 184, 268, 659
NmuCI	GTSAC	1 cut(s)	1185
NspV	TTCGAA	1 cut(s)	379
PciSI	GCTCTTC	2 cut(s)	882, 897
PdmI	GAANNNNTTC	1 cut(s)	2259
PfeI	GAWTC	6 cut(s)	169, 745, 1245, 1272, 1676, 1751
PflFI	GACNNNGTC	1 cut(s)	2042
PfoI	TCCNGGA	1 cut(s)	816
PkrI	GCNGC	7 cut(s)	140, 239, 812, 1209, 1450, 1663, 2068
Ple19I	CGATCG	1 cut(s)	217
PleI	GAGTC	4 cut(s)	103, 227, 379, 1007
PpsI	GAGTC	4 cut(s)	103, 227, 379, 1007
PshBI	ATTAAT	1 cut(s)	1656
Psp124BI	GAGCTC	2 cut(s)	126, 619
Psp6I	CCWGG	4 cut(s)	144, 816, 998, 1202
PspFI	CCCAGC	1 cut(s)	2069
PspGI	CCWGG	4 cut(s)	144, 816, 998, 1202
PspN4I	GGNNCC	5 cut(s)	105, 176, 184, 268, 659
PspOMI	GGGCCC	1 cut(s)	657
PspPI	GGNCC	6 cut(s)	13, 81, 148, 657, 658, 1428
PstNI	CAGNNNCTG	2 cut(s)	395, 1598
PsuI	RGATCY	2 cut(s)	182, 266
PsyI	GACNNNGTC	1 cut(s)	2042
PvuI	CGATCG	1 cut(s)	217
PvuII	CAGCTG	1 cut(s)	2069
RsaI	GTAC	3 cut(s)	785, 1067, 1180
RsaNI	GTAC	3 cut(s)	784, 1066, 1179
RseI	CAYNNNNRTG	2 cut(s)	1556, 2319
SacI	GAGCTC	2 cut(s)	126, 619
SapI	GCTCTTC	2 cut(s)	882, 897
SatI	GCNGC	7 cut(s)	139, 238, 811, 1208, 1449, 1662, 2067
Sau96I	GGNCC	6 cut(s)	13, 81, 148, 657, 658, 1428
ScaI	AGTACT	1 cut(s)	785
SchI	GAGTC	4 cut(s)	103, 228, 380, 1007
ScrFI	CCNGG	7 cut(s)	146, 656, 818, 1000, 1204, 1585, 1746
SduI	GDGCHC	6 cut(s)	106, 126, 580, 619, 661, 1984
SfaNI	GCATC	9 cut(s)	41, 249, 424, 750, 938, 1219, 1453, 1560, 1578
SfcI	CTRYAG	1 cut(s)	642
SfuI	TTCGAA	1 cut(s)	379
SinI	GGWCC	4 cut(s)	13, 81, 148, 1428
SmiMI	CAYNNNNRTG	2 cut(s)	1556, 2319
SmlI	CTYRAG	2 cut(s)	524, 1715
SmoI	CTYRAG	2 cut(s)	524, 1715
Sse9I	AATT	8 cut(s)	251, 487, 968, 1025, 1141, 1264, 1373, 1488
SspMI	CTAG	8 cut(s)	851, 983, 1194, 1388, 1548, 1566, 1634, 1985
SstI	GAGCTC	2 cut(s)	126, 619
StyD4I	CCNGG	7 cut(s)	144, 654, 816, 998, 1202, 1583, 1744
StyI	CCWWGG	3 cut(s)	351, 673, 1441
TaaI	ACNGT	3 cut(s)	788, 1070, 1960
TaqI	TCGA	8 cut(s)	66, 162, 217, 379, 613, 1339, 1903, 2080
TaqII	GACCGA	3 cut(s)	40, 165, 1634
TasI	AATT	8 cut(s)	251, 487, 968, 1025, 1141, 1264, 1373, 1488
TatI	WGTACW	1 cut(s)	783
TauI	GCSGC	4 cut(s)	141, 240, 813, 1664
TfiI	GAWTC	6 cut(s)	169, 745, 1245, 1272, 1676, 1751
TscAI	CASTG	5 cut(s)	140, 1044, 1339, 1762, 1934
TseFI	GTSAC	1 cut(s)	1185
TseI	GCWGC	3 cut(s)	1207, 1448, 2066
Tsp45I	GTSAC	1 cut(s)	1185
TspDTI	ATGAA	9 cut(s)	102, 467, 961, 1038, 1062, 1176, 1448, 1530, 2309
TspGWI	ACGGA	1 cut(s)	1802
TspRI	CASTG	5 cut(s)	140, 1044, 1339, 1762, 1934
Tth111I	GACNNNGTC	1 cut(s)	2042
Vha464I	CTTAAG	1 cut(s)	524
VpaK11BI	GGWCC	4 cut(s)	13, 81, 148, 1428
VspI	ATTAAT	1 cut(s)	1656
XapI	RAATTY	3 cut(s)	487, 968, 1264
XbaI	TCTAGA	1 cut(s)	1984
XmiI	GTMKAC	1 cut(s)	987
XmnI	GAANNNNTTC	1 cut(s)	2259
XspI	CTAG	8 cut(s)	851, 983, 1194, 1388, 1548, 1566, 1634, 1985
ZrmI	AGTACT	1 cut(s)	785

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.