Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0009457

Physical Location & Seq

Genomic Coordinates Forward (+)

2471200 .. 2475509

Gene Structure 4310 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG038400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGTTAACATCAGTTACAAAGACGCACCCTCAATGGGCGCATCTTGTGTCAGCAGTTGATCATAGAGTAGATAGGGCTCTGGCCATTCTAAGGCCCCAGGCTATAGCAGATCACAGGGCACTTCTTACTTCCCTTGGATGGCCACCACCTCTTTCCTCAACTCCAGATTCAGGGAGATCAAATGATGTTCAAAATCCTCTTTTCACAATGCAAGGAGGCCTTAAAGACCAGTACTGTGAAAACTTTCTTGCCCTCTGCAGCCTACAGGAGTTGCAAAGACGAAGAAAATCGCGACAACTTGAGGGATATAATCGCGAACTTGCTCTGTACCAGCCACTTTGGGTGATTGAAGAGCTTGTAAATCCCATAGCATTGGCATCCCAACGCCATTTCTCAAAATGGATCAACAAGCCAGAATTTATATTTGCTCTTGTCTACAAGATCACCAGGGATTATGTTGACTCTATGGATGAGCTATTGCAACCATTGGTTGATGAAGCAATGTTAACCGGGTACAGTTGCAGAGAAGAATGGATTTCAGGAATGGTATCCTCCTTATCGACATACTTGGCAAAAGAGATATTCCCAAAATACGCTCAACCCGATGAGGATGGTGTAATGGGTACTCAGGAACAGGCTAAAATATCTTGGCTTCATCTTGTGGACTTGATGATATCTTTTGATAAACAAATCAAGTCTCTGATAGAACATTCTGGAATCTTACTTTCATTTGAGGACGACGGTAACTTCGTAAAGGCTTCTTCTCTTAATGTTTTCTGTGATCGACCAGACTGGCTTGATTTATGGGCAGAGATAGAATTAAGTGATATACTAGATAAGTTGAAACTTGAAACTGGCGATGAGAGAAATTGGACAGTGAAAGTCCAAGGAGCAGGTCTTTTGTCTGACGCTGAAGATCACAAAGCTCCTGCAATTTCCAGTGCTTATCTTCGATGCCTATCATCTGTGGTTGATCGTTGCCGATCATTGCCTAGAATCTCTATGAGGTCAAGGTTTCTCAGATTAGCTGGGGGACCTGTTATACACAAATTTTTAGACTGCATACTCTTTAGGTGTCAAGAAGCTGAAGGTCTGACTGCCTTGACGGACAATGATGCTTTGATCAAAGTTGCCAACTCCATTAATGCTGCTCGCTACTTCGAATCTGTTTTGAAGGAATGGTGTGAGGACGTCTTTTTCCTTGAAATTGGGTCAAATCAATACGACCAACCAGGAATGTCAGTAGGTGAGCAAGATGGTAATGTAGATCCAGTTGAAGGTCTTGAAAGTGGTATTTTCTACAAAGACATTGTAAAGTTGGAGGAGTTTAGAACAGAGTGGGCAGAAAAAATTTCTGTTGTTATATTGAGGGGATTCGATGCTGAATGTCGAGATTATGTGAAGAACAGAAGGCAGTGGCAGGAAAAGGGTGAGGACGGTTGGACAGTATCTAAGTATTTAGTTGGTGCTCTTGATTATTTGCAAGGTAAAGTATCGGTGGTAGAAGTAAATTTGAATGCAGTAGACTTTGTTGGGGTATGGAGAAGTTTGGCAGGTGGGATAGATCGATTGTTTTTCAATGGTATTCTAATGAGCAATGCAAAGTTTCACGATGGAGGAGTTGAGAGGTTTGGTAGGGATTTAGAGGTTTTATTTGGGGCATTTGGGGCTTGGTGTTTGAGACCCGAGGGTTTCTTCCCTAGAGTAAGTGAGGGCTTGAAGCTGTTGAAAATTGGAGAAGAGGAACTTCAAAATAGTTTGGCTGGAGAGACATGGATGAAGGAAAAAGGGATCAGACATTTGAGCGTGGCCGAGGCAGAGAAGATTGTGAAGAGTAGAGTATTTACAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006888 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0019898 GO:0031090 GO:0031312 GO:0031984 GO:0033036 GO:0033365 GO:0034613 GO:0042175 GO:0042406 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RINT1_TIP1

Protein Analysis

617

Amino Acids

69.9

Weight (kDa)

5.18

Isoelectric Point (pI)

37.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RINT1_TIP1	PF04437	114 - 612	1.1e-35	RINT-1/TIP-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009457)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47700
fragaria_vesca	FvH4_5g15230 FvH4_5g15230 FvH4_5g15230
malus_domestica	MD06G1190600.v1.1 MD14G1197500.v1.1
prunus_persica	Prupe.5G189500_v2.0.a1
pyrus_communis	pycom06g16910 pycom14g16400
rosa_chinensis	RchiOBHm_Chr7g0180931
rosa_laevigata	RLG00000005224
rosa_multiflora	Rmu_co8437493.1_g000001 Rmu_sc0004056.1_g000008 Rmu_sc0028441.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272410
rosa_rugosa	Rorug06G0437700 Rorug06G0437700
rosa_samantha	Rh7AG039100 Rh7BG038400 Rh7CG040100 Rh7DG038500
rosa_wichuraiana	Rw7G003200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1544
AatII	GACGTC	1 cut(s)	1194
Acc36I	ACCTGC	2 cut(s)	884, 1544
AccI	GTMKAC	2 cut(s)	435, 1524
AccII	CGCG	2 cut(s)	292, 315
AclWI	GGATC	3 cut(s)	410, 1262, 1799
AcoI	YGGCCR	3 cut(s)	81, 140, 1809
AcsI	RAATTY	4 cut(s)	416, 1049, 1350, 1510
AcuI	CTGAAG	2 cut(s)	933, 1107
AcyI	GRCGYC	1 cut(s)	1191
AfaI	GTAC	4 cut(s)	233, 329, 515, 625
AfiI	CCNNNNNNNGG	5 cut(s)	34, 90, 138, 170, 1277
AjnI	CCWGG	3 cut(s)	96, 446, 1231
AluBI	AGCT	6 cut(s)	355, 475, 926, 1028, 1085, 1723
AluI	AGCT	6 cut(s)	355, 475, 926, 1028, 1085, 1723
Alw21I	GWGCWC	1 cut(s)	1471
Alw26I	GTCTC	3 cut(s)	702, 1675, 1763
AlwI	GGATC	3 cut(s)	410, 1262, 1799
Ama87I	CYCGRG	1 cut(s)	1685
AoxI	GGCC	5 cut(s)	81, 92, 140, 217, 1809
ApeKI	GCWGC	2 cut(s)	258, 1148
ApoI	RAATTY	4 cut(s)	416, 1049, 1350, 1510
ArsI	GACNNNNNNTTYG	2 cut(s)	731, 763
AseI	ATTAAT	1 cut(s)	1143
Asp700I	GAANNNNTTC	1 cut(s)	243
AspLEI	GCGC	1 cut(s)	40
AspS9I	GGNCC	2 cut(s)	93, 1034
AsuC2I	CCSGG	1 cut(s)	511
AsuHPI	GGTGA	4 cut(s)	355, 436, 1259, 1442
AsuII	TTCGAA	1 cut(s)	1161
AvaI	CYCGRG	1 cut(s)	1685
AvaII	GGWCC	1 cut(s)	1034
BaeGI	GKGCMC	1 cut(s)	121
BalI	TGGCCA	2 cut(s)	83, 142
BanII	GRGCYC	1 cut(s)	79
Bbv12I	GWGCWC	1 cut(s)	1471
BbvI	GCAGC	2 cut(s)	270, 1135
BccI	CCATC	4 cut(s)	132, 605, 1250, 1607
BciT130I	CCWGG	3 cut(s)	98, 448, 1233
BciVI	GTATCC	1 cut(s)	559
BclI	TGATCA	2 cut(s)	58, 1122
BcnI	CCSGG	1 cut(s)	511
BcoDI	GTCTC	3 cut(s)	702, 1675, 1763
BfaI	CTAG	3 cut(s)	833, 993, 1701
BfmI	CTRYAG	3 cut(s)	102, 256, 263
BfuAI	ACCTGC	2 cut(s)	884, 1544
BfuI	GTATCC	1 cut(s)	559
BisI	GCNGC	2 cut(s)	259, 1149
BlsI	GCNGC	2 cut(s)	260, 1150
BmcAI	AGTACT	1 cut(s)	233
Bme1390I	CCNGG	4 cut(s)	98, 448, 511, 1233
Bme18I	GGWCC	1 cut(s)	1034
BmeT110I	CYCGRG	1 cut(s)	1685
BmgT120I	GGNCC	2 cut(s)	93, 1034
BmiI	GGNNCC	2 cut(s)	95, 1035
BmrFI	CCNGG	4 cut(s)	98, 448, 511, 1233
BmsI	GCATC	5 cut(s)	49, 386, 944, 1105, 1369
BpmI	CTGGAG	2 cut(s)	147, 1785
Bpu14I	TTCGAA	1 cut(s)	1161
BpuEI	CTTGAG	1 cut(s)	320
BpuMI	CCSGG	1 cut(s)	511
Bsa29I	ATCGAT	1 cut(s)	1567
BsaBI	GATNNNNATC	1 cut(s)	958
BsaHI	GRCGYC	1 cut(s)	1191
BsaI	GGTCTC	1 cut(s)	1675
BsaJI	CCNNGG	6 cut(s)	96, 133, 447, 886, 1686, 1812
Bsc4I	CCNNNNNNNGG	5 cut(s)	34, 90, 138, 170, 1277
Bse1I	ACTGG	5 cut(s)	229, 797, 859, 939, 1271
Bse3DI	GCAATG	3 cut(s)	507, 986, 1603
Bse8I	GATNNNNATC	1 cut(s)	958
BseBI	CCWGG	3 cut(s)	98, 448, 1233
BseCI	ATCGAT	1 cut(s)	1567
BseDI	CCNNGG	6 cut(s)	96, 133, 447, 886, 1686, 1812
BseGI	GGATG	5 cut(s)	143, 377, 475, 616, 1782
BseJI	GATNNNNATC	1 cut(s)	958
BseLI	CCNNNNNNNGG	5 cut(s)	34, 90, 138, 170, 1277
BseMI	GCAATG	3 cut(s)	507, 986, 1603
BseMII	CTCAG	2 cut(s)	641, 1033
BseNI	ACTGG	5 cut(s)	229, 797, 859, 939, 1271
BseRI	GAGGAG	2 cut(s)	1337, 1632
BseSI	GKGCMC	1 cut(s)	121
BseXI	GCAGC	2 cut(s)	270, 1135
BseYI	CCCAGC	1 cut(s)	1028
Bsh1236I	CGCG	2 cut(s)	292, 315
BshFI	GGCC	5 cut(s)	83, 94, 142, 219, 1811
BshVI	ATCGAT	1 cut(s)	1567
BsiHKAI	GWGCWC	1 cut(s)	1471
BsiHKCI	CYCGRG	1 cut(s)	1685
BsiSI	CCGG	1 cut(s)	510
BslFI	GGGAC	1 cut(s)	1047
BslI	CCNNNNNNNGG	5 cut(s)	34, 90, 138, 170, 1277
BsmAI	GTCTC	3 cut(s)	702, 1675, 1763
BsmFI	GGGAC	1 cut(s)	1047
BsmI	GAATGC	1 cut(s)	1522
BsnI	GGCC	5 cut(s)	83, 94, 142, 219, 1811
Bso31I	GGTCTC	1 cut(s)	1675
BsoBI	CYCGRG	1 cut(s)	1685
Bsp119I	TTCGAA	1 cut(s)	1161
Bsp1286I	GDGCHC	3 cut(s)	79, 121, 1471
Bsp68I	TCGCGA	2 cut(s)	292, 315
BspANI	GGCC	5 cut(s)	83, 94, 142, 219, 1811
BspCNI	CTCAG	2 cut(s)	640, 1032
BspDI	ATCGAT	1 cut(s)	1567
BspFNI	CGCG	2 cut(s)	292, 315
BspLI	GGNNCC	2 cut(s)	95, 1035
BspMAI	CTGCAG	1 cut(s)	260
BspMI	ACCTGC	2 cut(s)	884, 1544
BspPI	GGATC	3 cut(s)	410, 1262, 1799
BspQI	GCTCTTC	1 cut(s)	345
BspT104I	TTCGAA	1 cut(s)	1161
BspTNI	GGTCTC	1 cut(s)	1675
BsrDI	GCAATG	3 cut(s)	507, 986, 1603
BsrI	ACTGG	5 cut(s)	229, 797, 859, 939, 1271
BssECI	CCNNGG	6 cut(s)	96, 133, 447, 886, 1686, 1812
BssNI	GRCGYC	1 cut(s)	1191
BssT1I	CCWWGG	2 cut(s)	133, 886
Bst2UI	CCWGG	3 cut(s)	98, 448, 1233
Bst4CI	ACNGT	6 cut(s)	236, 518, 743, 877, 1439, 1447
Bst6I	CTCTTC	3 cut(s)	345, 1734, 1826
BstACI	GRCGYC	1 cut(s)	1191
BstBI	TTCGAA	1 cut(s)	1161
BstC8I	GCNNGC	1 cut(s)	1153
BstDEI	CTNAG	4 cut(s)	89, 627, 1019, 1452
BstF5I	GGATG	5 cut(s)	143, 377, 475, 616, 1782
BstFNI	CGCG	2 cut(s)	292, 315
BstHHI	GCGC	1 cut(s)	40
BstMAI	GTCTC	3 cut(s)	702, 1675, 1763
BstMWI	GCNNNNNNNGC	1 cut(s)	1667
BstNI	CCWGG	3 cut(s)	98, 448, 1233
BstSCI	CCNGG	4 cut(s)	96, 446, 509, 1231
BstSFI	CTRYAG	3 cut(s)	102, 256, 263
BstSLI	GKGCMC	1 cut(s)	121
BstUI	CGCG	2 cut(s)	292, 315
BstV1I	GCAGC	2 cut(s)	270, 1135
BstX2I	RGATCY	1 cut(s)	1267
BstXI	CCANNNNNNTGG	1 cut(s)	373
BstYI	RGATCY	1 cut(s)	1267
Bsu15I	ATCGAT	1 cut(s)	1567
BsuI	GTATCC	1 cut(s)	559
BsuRI	GGCC	5 cut(s)	83, 94, 142, 219, 1811
BsuTUI	ATCGAT	1 cut(s)	1567
BtgZI	GCGATG	1 cut(s)	873
BtsCI	GGATG	5 cut(s)	143, 377, 475, 616, 1782
BtsI	GCAGTG	1 cut(s)	1421
BtsIMutI	CAGTG	3 cut(s)	882, 946, 1421
BtuMI	TCGCGA	2 cut(s)	292, 315
BveI	ACCTGC	2 cut(s)	884, 1544
Cac8I	GCNNGC	1 cut(s)	1153
CfoI	GCGC	1 cut(s)	40
Cfr13I	GGNCC	2 cut(s)	93, 1034
ClaI	ATCGAT	1 cut(s)	1567
CseI	GACGC	2 cut(s)	31, 917
Csp6I	GTAC	4 cut(s)	232, 328, 514, 624
CviAII	CATG	1 cut(s)	1773
CviQI	GTAC	4 cut(s)	232, 328, 514, 624
DdeI	CTNAG	4 cut(s)	89, 627, 1019, 1452
EaeI	YGGCCR	3 cut(s)	81, 140, 1809
Eam1104I	CTCTTC	3 cut(s)	345, 1734, 1826
EarI	CTCTTC	3 cut(s)	345, 1734, 1826
Eco130I	CCWWGG	2 cut(s)	133, 886
Eco147I	AGGCCT	1 cut(s)	219
Eco24I	GRGCYC	1 cut(s)	79
Eco31I	GGTCTC	1 cut(s)	1675
Eco32I	GATATC	1 cut(s)	675
Eco47I	GGWCC	1 cut(s)	1034
Eco57I	CTGAAG	2 cut(s)	933, 1107
Eco88I	CYCGRG	1 cut(s)	1685
EcoO109I	RGGNCCY	2 cut(s)	93, 1034
EcoRII	CCWGG	3 cut(s)	96, 446, 1231
EcoRV	GATATC	1 cut(s)	675
EcoT14I	CCWWGG	2 cut(s)	133, 886
EcoT38I	GRGCYC	1 cut(s)	79
ErhI	CCWWGG	2 cut(s)	133, 886
FaeI	CATG	1 cut(s)	1776
FalI	AAGNNNNNCTT	4 cut(s)	204, 236, 1731, 1763
FaqI	GGGAC	1 cut(s)	1047
FatI	CATG	1 cut(s)	1772
FbaI	TGATCA	2 cut(s)	58, 1122
FblI	GTMKAC	2 cut(s)	435, 1524
Fnu4HI	GCNGC	2 cut(s)	259, 1149
FokI	GGATG	5 cut(s)	150, 364, 482, 623, 1789
FriOI	GRGCYC	1 cut(s)	79
Fsp4HI	GCNGC	2 cut(s)	259, 1149
FspBI	CTAG	3 cut(s)	833, 993, 1701
GlaI	GCGC	1 cut(s)	39
GluI	GCNGC	2 cut(s)	259, 1149
GsaI	CCCAGC	1 cut(s)	1032
GsuI	CTGGAG	2 cut(s)	147, 1785
HaeIII	GGCC	5 cut(s)	83, 94, 142, 219, 1811
HapII	CCGG	1 cut(s)	510
HgaI	GACGC	2 cut(s)	31, 917
HhaI	GCGC	1 cut(s)	40
Hin1I	GRCGYC	1 cut(s)	1191
Hin1II	CATG	1 cut(s)	1776
Hin6I	GCGC	1 cut(s)	38
HinP1I	GCGC	1 cut(s)	38
HincII	GTYRAC	3 cut(s)	6, 460, 507
HindII	GTYRAC	3 cut(s)	6, 460, 507
HinfI	GANTC	6 cut(s)	167, 461, 717, 996, 1163, 1374
HpaI	GTTAAC	2 cut(s)	6, 507
HpaII	CCGG	1 cut(s)	510
HphI	GGTGA	4 cut(s)	355, 436, 1259, 1442
Hpy166II	GTNNAC	6 cut(s)	6, 436, 460, 507, 664, 1525
Hpy188I	TCNGA	5 cut(s)	702, 907, 1022, 1095, 1796
Hpy8I	GTNNAC	6 cut(s)	6, 436, 460, 507, 664, 1525
Hpy99I	CGWCG	1 cut(s)	743
HpyAV	CCTTC	5 cut(s)	1082, 1168, 1271, 1404, 1774
HpyCH4III	ACNGT	6 cut(s)	236, 518, 743, 877, 1439, 1447
HpyCH4IV	ACGT	1 cut(s)	1191
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1667
HpyF3I	CTNAG	4 cut(s)	89, 627, 1019, 1452
HpySE526I	ACGT	1 cut(s)	1191
Hsp92I	GRCGYC	1 cut(s)	1191
Hsp92II	CATG	1 cut(s)	1776
HspAI	GCGC	1 cut(s)	38
Ksp22I	TGATCA	2 cut(s)	58, 1122
KspAI	GTTAAC	2 cut(s)	6, 507
LguI	GCTCTTC	1 cut(s)	345
LmnI	GCTCC	2 cut(s)	890, 931
Lsp1109I	GCAGC	2 cut(s)	270, 1135
LweI	GCATC	5 cut(s)	49, 386, 944, 1105, 1369
MaeI	CTAG	3 cut(s)	833, 993, 1701
MaeII	ACGT	1 cut(s)	1191
MaeIII	GTNAC	2 cut(s)	13, 743
MflI	RGATCY	1 cut(s)	1267
MhlI	GDGCHC	3 cut(s)	79, 121, 1471
MlsI	TGGCCA	2 cut(s)	83, 142
MluCI	AATT	9 cut(s)	416, 818, 868, 933, 1049, 1206, 1350, 1510, 1731
MluNI	TGGCCA	2 cut(s)	83, 142
MlyI	GAGTC	1 cut(s)	455
MmeI	TCCRAC	2 cut(s)	1299, 1421
Mox20I	TGGCCA	2 cut(s)	83, 142
MroXI	GAANNNNTTC	1 cut(s)	243
MscI	TGGCCA	2 cut(s)	83, 142
MseI	TTAA	6 cut(s)	5, 222, 506, 768, 821, 1143
Msp20I	TGGCCA	2 cut(s)	83, 142
MspI	CCGG	1 cut(s)	510
MspR9I	CCNGG	4 cut(s)	98, 448, 511, 1233
Mva1269I	GAATGC	1 cut(s)	1522
MvaI	CCWGG	3 cut(s)	98, 448, 1233
MvnI	CGCG	2 cut(s)	292, 315
MwoI	GCNNNNNNNGC	1 cut(s)	1667
NciI	CCSGG	1 cut(s)	511
NlaIII	CATG	1 cut(s)	1776
NlaIV	GGNNCC	2 cut(s)	95, 1035
NmeAIII	GCCGAG	1 cut(s)	1837
NruI	TCGCGA	2 cut(s)	292, 315
NspV	TTCGAA	1 cut(s)	1161
PaqCI	CACCTGC	1 cut(s)	1544
PceI	AGGCCT	1 cut(s)	219
PciSI	GCTCTTC	1 cut(s)	345
PcsI	WCGNNNNNNNCGW	2 cut(s)	600, 747
PctI	GAATGC	1 cut(s)	1522
PdmI	GAANNNNTTC	1 cut(s)	243
PfeI	GAWTC	5 cut(s)	167, 717, 996, 1163, 1374
PkrI	GCNGC	2 cut(s)	260, 1150
PleI	GAGTC	1 cut(s)	455
PpsI	GAGTC	1 cut(s)	455
PpuMI	RGGWCCY	1 cut(s)	1034
PshBI	ATTAAT	1 cut(s)	1143
Psp5II	RGGWCCY	1 cut(s)	1034
Psp6I	CCWGG	3 cut(s)	96, 446, 1231
PspFI	CCCAGC	1 cut(s)	1028
PspGI	CCWGG	3 cut(s)	96, 446, 1231
PspN4I	GGNNCC	2 cut(s)	95, 1035
PspPI	GGNCC	2 cut(s)	93, 1034
PspPPI	RGGWCCY	1 cut(s)	1034
PstI	CTGCAG	1 cut(s)	260
PsuI	RGATCY	1 cut(s)	1267
RruI	TCGCGA	2 cut(s)	292, 315
RsaI	GTAC	4 cut(s)	233, 329, 515, 625
RsaNI	GTAC	4 cut(s)	232, 328, 514, 624
SapI	GCTCTTC	1 cut(s)	345
SaqAI	TTAA	6 cut(s)	5, 222, 506, 768, 821, 1143
SatI	GCNGC	2 cut(s)	259, 1149
Sau96I	GGNCC	2 cut(s)	93, 1034
ScaI	AGTACT	1 cut(s)	233
SchI	GAGTC	1 cut(s)	455
ScrFI	CCNGG	4 cut(s)	98, 448, 511, 1233
SduI	GDGCHC	3 cut(s)	79, 121, 1471
SfaNI	GCATC	5 cut(s)	49, 386, 944, 1105, 1369
SfcI	CTRYAG	3 cut(s)	102, 256, 263
SfuI	TTCGAA	1 cut(s)	1161
SinI	GGWCC	1 cut(s)	1034
SmlI	CTYRAG	1 cut(s)	299
SmoI	CTYRAG	1 cut(s)	299
Sse9I	AATT	9 cut(s)	416, 818, 868, 933, 1049, 1206, 1350, 1510, 1731
SseBI	AGGCCT	1 cut(s)	219
SspMI	CTAG	3 cut(s)	833, 993, 1701
StuI	AGGCCT	1 cut(s)	219
StyD4I	CCNGG	4 cut(s)	96, 446, 509, 1231
StyI	CCWWGG	2 cut(s)	133, 886
TaaI	ACNGT	6 cut(s)	236, 518, 743, 877, 1439, 1447
TaiI	ACGT	1 cut(s)	1194
TaqI	TCGA	7 cut(s)	560, 784, 952, 1161, 1377, 1390, 1567
TasI	AATT	9 cut(s)	416, 818, 868, 933, 1049, 1206, 1350, 1510, 1731
TatI	WGTACW	1 cut(s)	231
TfiI	GAWTC	5 cut(s)	167, 717, 996, 1163, 1374
Tru1I	TTAA	6 cut(s)	5, 222, 506, 768, 821, 1143
Tru9I	TTAA	6 cut(s)	5, 222, 506, 768, 821, 1143
TscAI	CASTG	3 cut(s)	882, 946, 1421
TseI	GCWGC	2 cut(s)	258, 1148
TspDTI	ATGAA	4 cut(s)	510, 644, 717, 1793
TspGWI	ACGGA	1 cut(s)	1121
TspRI	CASTG	3 cut(s)	882, 946, 1421
VpaK11BI	GGWCC	1 cut(s)	1034
VspI	ATTAAT	1 cut(s)	1143
XapI	RAATTY	4 cut(s)	416, 1049, 1350, 1510
XmiI	GTMKAC	2 cut(s)	435, 1524
XmnI	GAANNNNTTC	1 cut(s)	243
XspI	CTAG	3 cut(s)	833, 993, 1701
ZraI	GACGTC	1 cut(s)	1192
ZrmI	AGTACT	1 cut(s)	233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.