AT3G49490

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
18344738 .. 18348730
3993 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G49490.1

Sequence Viewer

Length: 2862 bp
ATGACCGATGGATTTCGCTATAATGGTTTCTCTGGAATAGCGTACCCGTTTTGGCTCTCATCTCCACCACCGCCTACACCTCCACATCATCCAGCTTCTGCGCCGCCGTTTCAACAAAGCAATCCGGTTGAATCCTATGATCCAGCCAAAGAAGTGTTTGATCCGATGATGTTGTATCATGACTCTTATCAACGATCGCCGGCTAATTGGTCAAATAACCCATCGTATCGTGAAAATTCTCGCTCTCAGACTCCTTCTTCATCGTTTTATGCTGACAACACTCAACATGGAAATAGTGGTCTTCGAGGTGAAGATTCTTCTTATAAAGATATGTTATCACCGAGTGGATTTTACTCTTCAAGGGAATCATCATCTGATTTTGTGTCACTTCCTCCCACTGAGAATTTCTCAGAGAGGCAACGTTTGAACTTTGAGCCTACCTACAGCTCAGCTACCTTAGCTCCTGTGTCTTCTTATGCAGATATGCTAATCAGAAATTCTCAGGACTCATTCTTTACTCCTATCGCGTCATCTGGTGTTTACTCTTCTAGCAATGCTGTTGATGAGAAACGTCCTGGATATTACTTTCTTGGCTCAGATAGATCTGAAACTATGAATGTTGTCTCTGCTTCTCGTGTGGAGCCTTACATGTGTGATACAGATTGTAATCCTTCTTTTCCAATGCCGAATTTTATAACACAAGCTCTCTTTGATGGAAGTCAGACTGGGCTTCGTGTAGGAGATGGGAGATCATTCCCGAGCAACAGTGATGTTTGTAGTCATGCGCCTCAGAATTTTTTAGGAGCTCAATCCAGCTTGCAGAGTTCCTCTGTTGAACCAGTTAACTTCGATGTGTTACTGGGATATGGTGAAGCTACTGGTCATATCAAGCCTTTGCCCGAGAATCCAAATCTTCCCTATCCGGTAGTTGGCTCGCAAGGTTCGAGAAGTCCGCGATCTTCCTACCCCTTACCATCTATTATTAATTCCTCTGTGTCACTGATTAAAGATGAAGTAGAAGGTAGTGGTGTCTCCTCCCTTTATCAGAGGCCTTATACTTTGGTTGCTGACAGTGAGAATGGTGTTTCTGAGAGCTCCTTAAAGAATGCAACTGAGGATTTAAATTGTCACGAGCCTCGATCTTGGAGCCACTTCATGGTAACCTCTGAGGGACCTTCAGCTCCCACGATGTTTTCTATGGGAAGTGAGTCAGGTGGACCTTCAGCTCCTACGATGAAAGCGGATAATGAGAATGCTCAGTCAGCTGGCAACTACAAACCCCCTTTCGAAGGTAGTACTACTCAACCTAGTGAAGATGTTCCAACCAACCAAGAGTCTTGTAATCTCCAGAAACAAACATTTGATATAATGGATAGAGATAAGAAGATCAGATCGTTGACAGATGTGGGGCTCGATTTGAGTAGTAGATCAAATGCAGATGATGTCTCAACTGGCCGATCACCTGAAAGGCACTTCTGTGATCAAGGAGATTTCCCATCTCCAACTTCTTATCCAAGAGTTTCTTCTGTTGTTAACGCCATGCATAATTTGTCAGAAGTGCTTGTTTATGAATGCTTTAACAATGGAAGCTGGCTGAAGCTGGAGCAACTTGAGAACCTTGATAAAGTAGTAGATAATCTCACAAAGTGTTTGAAGAAAATTACTGATAATAAGACAACAGCAGGGGAAGCAACACTTCCAACGCAATCTATGCATGTCACCTGTCCAAACGTGGTTGACCTTCATGAGGCCGCAACGGGAGTTGCTAAAGACTTTCAAAGGTTTAGTGTCAAGCCACTAGACAGCTTTGGTGTCAAAGAACCGGTGGATAAGAATGAAATGACCCAGAGTATTAAGAACATACTTGCTTCCAACTTTCCTGATGGTGAAGAAAACCACCCACAAACTCTCTTGTACAAGAATCTCTGGCTCGAAACTGAAGCTGCCTTATGTTCCACAACTTGCATGGCTCGGTATCATCGGATCAAGAACGAGATTGGTAATCTCAAATTGAACAATAAAGAGATCTCTGCGGATGCAGTAAGCTTTATGCAGGAACCTTCTCTTAACACACAGAAATCGGTTCCCATCATGAATGCAAATGCAGACAAGGATACACCTGAATCTATCATCAAACATGGAAGCAATTGTGGGAAAAATGCAGCAACAATGAGTCATGATGCATCCGAAAGCTCTAGAATCAACTCAGATCCTGTGGATGCAGTATTATCGGTTATGTCCAGAAGCTTTACTGGTGGTTTAGAGCAGACCATTCGTGGAAACTTAAGGCCTGATGATGCAACCTTTGCAAAGATACCGGATGCGATATGGCAGGAAACCTCTGCATCCACTACAGAGAACAAACATAGAGAGGTTATAGACCGGTTTCAGATATTGAAGGAGCAGGAAACAGAGCGCAAGCTCAAGTCTCAGAAGCTCCCTGATTCAGACATTGATGTTATAGACCGGTTTCAGATTCTCAAGCAGCAGGAAACAAATCGCAAACTCAAGGCTCAAAAATGTCCAGAAACAAAAAAGGGTGACCAGGAGGACAAACTAGAAGGTTCAGTGATGGCTAATATGGGCAGAAGCAGCGATGTGAGTGATGTTATGGATAGATTCCAGATACTGAAACGCCGGGAAGCTGAACAAGTGAAGAAATCTCTCAACAGCATGGATGTAGATTCGGATTCAGAAAATGACCAGCCACAAAAGCGTGATCATCTCTGGTCAGATTCGTTATTCCCAATACGTGGACATTCTCAGAGAGAAACATGCGCCGCGGACACTGAACAATCTGCATCTGGCAAAGGATACGAGAGCCCGACCTCGGACTGGGAACATGTCATCAAGGATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

953

Amino Acids

105.34

Weight (kDa)

5.0

Isoelectric Point (pI)

56.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 324, 695
AccB7I CCANNNNNTGG 2 cut(s) 1156, 2753
AccII CGCG 3 cut(s) 527, 955, 2783
AciI CCGC 8 cut(s) 71, 104, 953, 1241, 1752, 2033, 2781, 2783
AclI AACGTT 1 cut(s) 421
AclWI GGATC 4 cut(s) 134, 155, 1991, 2204
AcoI YGGCCR 1 cut(s) 1453
AcsI RAATTY 5 cut(s) 235, 403, 496, 688, 793
AcuI CTGAAG 4 cut(s) 1161, 1206, 1616, 1959
AdeI CACNNNGTG 2 cut(s) 344, 1647
AfaI GTAC 3 cut(s) 44, 1297, 1916
AfiI CCNNNNNNNGG 7 cut(s) 929, 1156, 1289, 1747, 2753, 2830, 2835
AflII CTTAAG 1 cut(s) 2284
AflIII ACRYGT 2 cut(s) 648, 2842
AgeI ACCGGT 3 cut(s) 1822, 2382, 2466
AgsI TTSAA 9 cut(s) 113, 131, 360, 427, 836, 1654, 1778, 2014, 2398
AjnI CCWGG 2 cut(s) 574, 2544
AjuI GAANNNNNNNTTGG 2 cut(s) 1507, 1539
AleI CACNNNNGTG 1 cut(s) 1476
Alw21I GWGCWC 2 cut(s) 808, 1097
Alw26I GTCTC 4 cut(s) 628, 1036, 1450, 2433
AlwI GGATC 4 cut(s) 134, 155, 1991, 2204
AlwNI CAGNNNCTG 3 cut(s) 98, 2213, 2629
Ama87I CYCGRG 2 cut(s) 757, 899
AoxI GGCC 4 cut(s) 1049, 1453, 1749, 2288
ApeKI GCWGC 4 cut(s) 1943, 2162, 2485, 2592
ApoI RAATTY 5 cut(s) 235, 403, 496, 688, 793
AseI ATTAAT 1 cut(s) 984
AsiGI ACCGGT 3 cut(s) 1822, 2382, 2466
Asp700I GAANNNNTTC 1 cut(s) 1317
AspLEI GCGC 4 cut(s) 103, 787, 2418, 2780
AspS9I GGNCC 2 cut(s) 1172, 1217
AsuC2I CCSGG 1 cut(s) 2639
AsuHPI GGTGA 7 cut(s) 320, 330, 881, 1452, 1711, 1898, 2552
AsuII TTCGAA 1 cut(s) 1287
AvaI CYCGRG 2 cut(s) 757, 899
AvaII GGWCC 2 cut(s) 1172, 1217
BanII GRGCYC 4 cut(s) 808, 1097, 1413, 2825
BauI CACGAG 2 cut(s) 633, 1130
BbsI GAAGAC 2 cut(s) 293, 462
Bbv12I GWGCWC 2 cut(s) 808, 1097
BbvI GCAGC 4 cut(s) 1930, 2174, 2497, 2604
BccI CCATC 9 cut(s) 2, 229, 707, 737, 982, 1504, 1877, 2096, 2566
BceAI ACGGC 1 cut(s) 91
BcgI CGANNNNNNTGC 4 cut(s) 2211, 2245, 2255, 2289
BciT130I CCWGG 2 cut(s) 576, 2546
BciVI GTATCC 2 cut(s) 2107, 2807
BclI TGATCA 2 cut(s) 1480, 2719
BcnI CCSGG 1 cut(s) 2639
BcoDI GTCTC 4 cut(s) 628, 1036, 1450, 2433
BfaI CTAG 5 cut(s) 549, 1308, 1799, 2196, 2558
BfmI CTRYAG 2 cut(s) 442, 2352
BfrI CTTAAG 1 cut(s) 2284
BfuI GTATCC 2 cut(s) 2107, 2807
BglII AGATCT 2 cut(s) 602, 2025
BisI GCNGC 7 cut(s) 104, 1752, 1944, 2163, 2486, 2593, 2781
BlpI GCTNAGC 1 cut(s) 448
BlsI GCNGC 7 cut(s) 105, 1753, 1945, 2164, 2487, 2594, 2782
BmcAI AGTACT 1 cut(s) 1297
Bme1390I CCNGG 3 cut(s) 576, 2546, 2639
Bme18I GGWCC 2 cut(s) 1172, 1217
BmeT110I CYCGRG 2 cut(s) 757, 899
BmgT120I GGNCC 2 cut(s) 1172, 1217
BmiI GGNNCC 5 cut(s) 642, 1148, 1173, 2058, 2085
BmrFI CCNGG 3 cut(s) 576, 2546, 2639
BmrI ACTGGG 3 cut(s) 735, 869, 2845
BmsI GCATC 8 cut(s) 2026, 2170, 2192, 2209, 2287, 2311, 2354, 2810
BmuI ACTGGG 3 cut(s) 735, 869, 2845
BpiI GAAGAC 2 cut(s) 293, 462
BplI GAGNNNNNCTC 2 cut(s) 392, 424
BpmI CTGGAG 2 cut(s) 1331, 1622
Bpu10I CCTNAGC 1 cut(s) 457
Bpu1102I GCTNAGC 1 cut(s) 448
Bpu14I TTCGAA 1 cut(s) 1287
BpuEI CTTGAG 4 cut(s) 1631, 2408, 2465, 2492
BpuMI CCSGG 1 cut(s) 2639
BsaAI YACGTR 1 cut(s) 2753
BsaBI GATNNNNATC 1 cut(s) 666
BsaJI CCNNGG 2 cut(s) 2781, 2829
BsaWI WCCGGW 6 cut(s) 124, 922, 1822, 2317, 2382, 2466
BsaXI ACNNNNNCTCC 2 cut(s) 445, 475
Bsc4I CCNNNNNNNGG 7 cut(s) 929, 1156, 1289, 1747, 2753, 2830, 2835
Bse118I RCCGGY 4 cut(s) 199, 1822, 2382, 2466
Bse1I ACTGG 7 cut(s) 730, 839, 864, 883, 1456, 2257, 2840
Bse3DI GCAATG 1 cut(s) 559
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 2 cut(s) 576, 2546
BseDI CCNNGG 2 cut(s) 2781, 2829
BseGI GGATG 8 cut(s) 88, 2041, 2183, 2224, 2326, 2345, 2683, 2860
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 7 cut(s) 929, 1156, 1289, 1747, 2753, 2830, 2835
BseMI GCAATG 1 cut(s) 559
BseNI ACTGG 7 cut(s) 730, 839, 864, 883, 1456, 2257, 2840
BseRI GAGGAG 1 cut(s) 1024
BseXI GCAGC 4 cut(s) 1930, 2174, 2497, 2604
Bsh1236I CGCG 3 cut(s) 527, 955, 2783
Bsh1285I CGRYCG 1 cut(s) 197
BshFI GGCC 4 cut(s) 1051, 1455, 1751, 2290
BshTI ACCGGT 3 cut(s) 1822, 2382, 2466
BsiEI CGRYCG 1 cut(s) 197
BsiHKAI GWGCWC 2 cut(s) 808, 1097
BsiHKCI CYCGRG 2 cut(s) 757, 899
BsiSI CCGG 8 cut(s) 125, 200, 923, 1823, 2318, 2383, 2467, 2638
BslFI GGGAC 1 cut(s) 1185
BslI CCNNNNNNNGG 7 cut(s) 929, 1156, 1289, 1747, 2753, 2830, 2835
BsmAI GTCTC 4 cut(s) 628, 1036, 1450, 2433
BsmFI GGGAC 1 cut(s) 1185
BsmI GAATGC 4 cut(s) 1111, 1258, 1577, 2101
BsnI GGCC 4 cut(s) 1051, 1455, 1751, 2290
BsoBI CYCGRG 2 cut(s) 757, 899
Bsp119I TTCGAA 1 cut(s) 1287
Bsp1286I GDGCHC 4 cut(s) 808, 1097, 1413, 2825
Bsp1407I TGTACA 1 cut(s) 1914
Bsp1720I GCTNAGC 1 cut(s) 448
BspACI CCGC 8 cut(s) 71, 104, 953, 1241, 1752, 2033, 2781, 2783
BspANI GGCC 4 cut(s) 1051, 1455, 1751, 2290
BspFNI CGCG 3 cut(s) 527, 955, 2783
BspHI TCATGA 4 cut(s) 178, 1744, 2091, 2176
BspLI GGNNCC 5 cut(s) 642, 1148, 1173, 2058, 2085
BspPI GGATC 4 cut(s) 134, 155, 1991, 2204
BspT104I TTCGAA 1 cut(s) 1287
BspTI CTTAAG 1 cut(s) 2284
BsrDI GCAATG 1 cut(s) 559
BsrFI RCCGGY 4 cut(s) 199, 1822, 2382, 2466
BsrGI TGTACA 1 cut(s) 1914
BsrI ACTGG 7 cut(s) 730, 839, 864, 883, 1456, 2257, 2840
BssAI RCCGGY 4 cut(s) 199, 1822, 2382, 2466
BssECI CCNNGG 2 cut(s) 2781, 2829
BssSI CACGAG 2 cut(s) 633, 1130
Bst2BI CACGAG 2 cut(s) 633, 1130
Bst2UI CCWGG 2 cut(s) 576, 2546
Bst4CI ACNGT 2 cut(s) 767, 1073
Bst6I CTCTTC 2 cut(s) 361, 550
BstAFI CTTAAG 1 cut(s) 2284
BstAPI GCANNNNNTGC 2 cut(s) 1711, 2306
BstAUI TGTACA 1 cut(s) 1914
BstBAI YACGTR 1 cut(s) 2753
BstBI TTCGAA 1 cut(s) 1287
BstC8I GCNNGC 6 cut(s) 201, 818, 935, 1267, 1592, 2420
BstDSI CCRYGG 1 cut(s) 2781
BstEII GGTNACC 2 cut(s) 1159, 2540
BstENI CCTNNNNNAGG 2 cut(s) 1287, 1745
BstF5I GGATG 8 cut(s) 88, 2041, 2183, 2224, 2326, 2345, 2683, 2860
BstFNI CGCG 3 cut(s) 527, 955, 2783
BstHHI GCGC 4 cut(s) 103, 787, 2418, 2780
BstMAI GTCTC 4 cut(s) 628, 1036, 1450, 2433
BstMCI CGRYCG 1 cut(s) 197
BstMWI GCNNNNNNNGC 7 cut(s) 458, 1262, 1688, 1711, 2306, 2592, 2713
BstNI CCWGG 2 cut(s) 576, 2546
BstNSI RCATGY 4 cut(s) 652, 1718, 2778, 2846
BstPI GGTNACC 2 cut(s) 1159, 2540
BstSCI CCNGG 3 cut(s) 574, 2544, 2637
BstSFI CTRYAG 2 cut(s) 442, 2352
BstUI CGCG 3 cut(s) 527, 955, 2783
BstV1I GCAGC 4 cut(s) 1930, 2174, 2497, 2604
BstV2I GAAGAC 2 cut(s) 293, 462
BstX2I RGATCY 3 cut(s) 602, 2025, 2209
BstYI RGATCY 3 cut(s) 602, 2025, 2209
BsuI GTATCC 2 cut(s) 2107, 2807
BsuRI GGCC 4 cut(s) 1051, 1455, 1751, 2290
BtgI CCRYGG 1 cut(s) 2781
BtgZI GCGATG 1 cut(s) 2610
BtsCI GGATG 8 cut(s) 88, 2041, 2183, 2224, 2326, 2345, 2683, 2860
BtsIMutI CAGTG 6 cut(s) 396, 772, 998, 1078, 2574, 2787
Cac8I GCNNGC 6 cut(s) 201, 818, 935, 1267, 1592, 2420
CaiI CAGNNNCTG 3 cut(s) 98, 2213, 2629
CciI TCATGA 4 cut(s) 178, 1744, 2091, 2176
CfoI GCGC 4 cut(s) 103, 787, 2418, 2780
Cfr10I RCCGGY 4 cut(s) 199, 1822, 2382, 2466
Cfr13I GGNCC 2 cut(s) 1172, 1217
Cfr42I CCGCGG 1 cut(s) 2784
CseI GACGC 1 cut(s) 516
Csp6I GTAC 3 cut(s) 43, 1296, 1915
CspAI ACCGGT 3 cut(s) 1822, 2382, 2466
CviQI GTAC 3 cut(s) 43, 1296, 1915
DraI TTTAAA 1 cut(s) 1122
DraIII CACNNNGTG 2 cut(s) 344, 1647
EaeI YGGCCR 1 cut(s) 1453
Eam1104I CTCTTC 2 cut(s) 361, 550
EarI CTCTTC 2 cut(s) 361, 550
Ecl136II GAGCTC 2 cut(s) 806, 1095
Eco147I AGGCCT 2 cut(s) 1051, 2290
Eco24I GRGCYC 4 cut(s) 808, 1097, 1413, 2825
Eco47I GGWCC 2 cut(s) 1172, 1217
Eco53kI GAGCTC 2 cut(s) 806, 1095
Eco57I CTGAAG 4 cut(s) 1161, 1206, 1616, 1959
Eco88I CYCGRG 2 cut(s) 757, 899
Eco91I GGTNACC 2 cut(s) 1159, 2540
EcoICRI GAGCTC 2 cut(s) 806, 1095
EcoNI CCTNNNNNAGG 2 cut(s) 1287, 1745
EcoO109I RGGNCCY 1 cut(s) 1172
EcoO65I GGTNACC 2 cut(s) 1159, 2540
EcoRII CCWGG 2 cut(s) 574, 2544
EcoT22I ATGCAT 3 cut(s) 1545, 1716, 2185
EcoT38I GRGCYC 4 cut(s) 808, 1097, 1413, 2825
FalI AAGNNNNNCTT 4 cut(s) 1507, 1539, 1680, 1712
FaqI GGGAC 1 cut(s) 1185
FbaI TGATCA 2 cut(s) 1480, 2719
Fnu4HI GCNGC 7 cut(s) 104, 1752, 1944, 2163, 2486, 2593, 2781
FokI GGATG 7 cut(s) 75, 2048, 2170, 2231, 2332, 2333, 2690
FriOI GRGCYC 4 cut(s) 808, 1097, 1413, 2825
Fsp4HI GCNGC 7 cut(s) 104, 1752, 1944, 2163, 2486, 2593, 2781
FspBI CTAG 5 cut(s) 549, 1308, 1799, 2196, 2558
GlaI GCGC 4 cut(s) 102, 786, 2417, 2779
GluI GCNGC 7 cut(s) 104, 1752, 1944, 2163, 2486, 2593, 2781
GsuI CTGGAG 2 cut(s) 1331, 1622
HaeIII GGCC 4 cut(s) 1051, 1455, 1751, 2290
HapII CCGG 8 cut(s) 125, 200, 923, 1823, 2318, 2383, 2467, 2638
HgaI GACGC 1 cut(s) 516
HhaI GCGC 4 cut(s) 103, 787, 2418, 2780
Hin6I GCGC 4 cut(s) 101, 785, 2416, 2778
HinP1I GCGC 4 cut(s) 101, 785, 2416, 2778
HincII GTYRAC 4 cut(s) 844, 1398, 1534, 1738
HindII GTYRAC 4 cut(s) 844, 1398, 1534, 1738
HindIII AAGCTT 2 cut(s) 2044, 2245
HpaI GTTAAC 2 cut(s) 844, 1534
HpaII CCGG 8 cut(s) 125, 200, 923, 1823, 2318, 2383, 2467, 2638
HphI GGTGA 7 cut(s) 320, 330, 881, 1452, 1711, 1898, 2552
Hpy166II GTNNAC 7 cut(s) 541, 844, 1217, 1398, 1534, 1738, 2756
Hpy8I GTNNAC 7 cut(s) 541, 844, 1217, 1398, 1534, 1738, 2756
HpyCH4III ACNGT 2 cut(s) 767, 1073
HpyCH4IV ACGT 4 cut(s) 421, 571, 1731, 2752
HpyF10VI GCNNNNNNNGC 7 cut(s) 458, 1262, 1688, 1711, 2306, 2592, 2713
HpySE526I ACGT 4 cut(s) 421, 571, 1731, 2752
HspAI GCGC 4 cut(s) 101, 785, 2416, 2778
KroI GCCGGC 1 cut(s) 199
KroNI GCCGGC 1 cut(s) 201
Ksp22I TGATCA 2 cut(s) 1480, 2719
KspAI GTTAAC 2 cut(s) 844, 1534
KspI CCGCGG 1 cut(s) 2784
Lsp1109I GCAGC 4 cut(s) 1930, 2174, 2497, 2604
LweI GCATC 8 cut(s) 2026, 2170, 2192, 2209, 2287, 2311, 2354, 2810
MaeI CTAG 5 cut(s) 549, 1308, 1799, 2196, 2558
MaeII ACGT 4 cut(s) 421, 571, 1731, 2752
MaeIII GTNAC 7 cut(s) 384, 855, 996, 1127, 1159, 1717, 2540
MfeI CAATTG 1 cut(s) 2146
MflI RGATCY 3 cut(s) 602, 2025, 2209
MhlI GDGCHC 4 cut(s) 808, 1097, 1413, 2825
MlyI GAGTC 6 cut(s) 176, 244, 500, 1217, 1343, 2182
MmeI TCCRAC 4 cut(s) 1346, 1526, 1724, 1896
Mph1103I ATGCAT 3 cut(s) 1545, 1716, 2185
MroNI GCCGGC 1 cut(s) 199
MroXI GAANNNNTTC 1 cut(s) 1317
MslI CAYNNNNRTG 1 cut(s) 1476
MspA1I CMGCKG 2 cut(s) 1265, 2783
MspCI CTTAAG 1 cut(s) 2284
MspI CCGG 8 cut(s) 125, 200, 923, 1823, 2318, 2383, 2467, 2638
MspR9I CCNGG 3 cut(s) 576, 2546, 2639
MunI CAATTG 1 cut(s) 2146
Mva1269I GAATGC 4 cut(s) 1111, 1258, 1577, 2101
MvaI CCWGG 2 cut(s) 576, 2546
MvnI CGCG 3 cut(s) 527, 955, 2783
MwoI GCNNNNNNNGC 7 cut(s) 458, 1262, 1688, 1711, 2306, 2592, 2713
NaeI GCCGGC 1 cut(s) 201
NciI CCSGG 1 cut(s) 2639
NgoMIV GCCGGC 1 cut(s) 199
NlaIV GGNNCC 5 cut(s) 642, 1148, 1173, 2058, 2085
NmuCI GTSAC 5 cut(s) 384, 996, 1127, 1717, 2540
NsiI ATGCAT 3 cut(s) 1545, 1716, 2185
NspI RCATGY 4 cut(s) 652, 1718, 2778, 2846
NspV TTCGAA 1 cut(s) 1287
OliI CACNNNNGTG 1 cut(s) 1476
PagI TCATGA 4 cut(s) 178, 1744, 2091, 2176
PceI AGGCCT 2 cut(s) 1051, 2290
PciI ACATGT 2 cut(s) 648, 2842
PcsI WCGNNNNNNNCGW 1 cut(s) 941
PctI GAATGC 4 cut(s) 1111, 1258, 1577, 2101
PdiI GCCGGC 1 cut(s) 201
PdmI GAANNNNTTC 1 cut(s) 1317
PflMI CCANNNNNTGG 2 cut(s) 1156, 2753
PfoI TCCNGGA 1 cut(s) 574
PinAI ACCGGT 3 cut(s) 1822, 2382, 2466
PkrI GCNGC 7 cut(s) 105, 1753, 1945, 2164, 2487, 2594, 2782
Ple19I CGATCG 1 cut(s) 197
PleI GAGTC 6 cut(s) 176, 244, 500, 1216, 1342, 2181
PpsI GAGTC 6 cut(s) 176, 244, 500, 1216, 1342, 2181
Ppu21I YACGTR 1 cut(s) 2753
PpuMI RGGWCCY 1 cut(s) 1172
PscI ACATGT 2 cut(s) 648, 2842
PshBI ATTAAT 1 cut(s) 984
PsiI TTATAA 2 cut(s) 324, 695
Psp124BI GAGCTC 2 cut(s) 808, 1097
Psp1406I AACGTT 1 cut(s) 421
Psp5II RGGWCCY 1 cut(s) 1172
Psp6I CCWGG 2 cut(s) 574, 2544
PspEI GGTNACC 2 cut(s) 1159, 2540
PspGI CCWGG 2 cut(s) 574, 2544
PspN4I GGNNCC 5 cut(s) 642, 1148, 1173, 2058, 2085
PspPI GGNCC 2 cut(s) 1172, 1217
PspPPI RGGWCCY 1 cut(s) 1172
PstNI CAGNNNCTG 3 cut(s) 98, 2213, 2629
PsuI RGATCY 3 cut(s) 602, 2025, 2209
PvuI CGATCG 1 cut(s) 197
PvuII CAGCTG 1 cut(s) 1265
RsaI GTAC 3 cut(s) 44, 1297, 1916
RsaNI GTAC 3 cut(s) 43, 1296, 1915
RseI CAYNNNNRTG 1 cut(s) 1476
SacI GAGCTC 2 cut(s) 808, 1097
SacII CCGCGG 1 cut(s) 2784
SatI GCNGC 7 cut(s) 104, 1752, 1944, 2163, 2486, 2593, 2781
Sau96I GGNCC 2 cut(s) 1172, 1217
ScaI AGTACT 1 cut(s) 1297
SchI GAGTC 6 cut(s) 176, 244, 500, 1217, 1343, 2182
ScrFI CCNGG 3 cut(s) 576, 2546, 2639
SduI GDGCHC 4 cut(s) 808, 1097, 1413, 2825
SfaNI GCATC 8 cut(s) 2026, 2170, 2192, 2209, 2287, 2311, 2354, 2810
SfcI CTRYAG 2 cut(s) 442, 2352
Sfr303I CCGCGG 1 cut(s) 2784
SfuI TTCGAA 1 cut(s) 1287
SgrBI CCGCGG 1 cut(s) 2784
SinI GGWCC 2 cut(s) 1172, 1217
SmiI ATTTAAAT 1 cut(s) 1122
SmiMI CAYNNNNRTG 1 cut(s) 1476
SmlI CTYRAG 5 cut(s) 1610, 2284, 2423, 2480, 2507
SmoI CTYRAG 5 cut(s) 1610, 2284, 2423, 2480, 2507
SseBI AGGCCT 2 cut(s) 1051, 2290
SsiI CCGC 8 cut(s) 71, 104, 953, 1241, 1752, 2033, 2781, 2783
SspMI CTAG 5 cut(s) 549, 1308, 1799, 2196, 2558
SstI GAGCTC 2 cut(s) 808, 1097
StuI AGGCCT 2 cut(s) 1051, 2290
StyD4I CCNGG 3 cut(s) 574, 2544, 2637
SwaI ATTTAAAT 1 cut(s) 1122
TaaI ACNGT 2 cut(s) 767, 1073
TaiI ACGT 4 cut(s) 424, 574, 1734, 2755
TaqI TCGA 7 cut(s) 304, 849, 944, 1138, 1287, 1413, 1932
TaqII GACCGA 1 cut(s) 20
TatI WGTACW 2 cut(s) 1295, 1914
TauI GCSGC 3 cut(s) 106, 1754, 2783
TscAI CASTG 6 cut(s) 403, 772, 1005, 1078, 2574, 2794
TseFI GTSAC 5 cut(s) 384, 996, 1127, 1717, 2540
TseI GCWGC 4 cut(s) 1943, 2162, 2485, 2592
Tsp45I GTSAC 5 cut(s) 384, 996, 1127, 1717, 2540
TspDTI ATGAA 9 cut(s) 249, 629, 1026, 1144, 1250, 1584, 1733, 1851, 2108
TspRI CASTG 6 cut(s) 403, 772, 1005, 1078, 2574, 2794
Van91I CCANNNNNTGG 2 cut(s) 1156, 2753
Vha464I CTTAAG 1 cut(s) 2284
VpaK11BI GGWCC 2 cut(s) 1172, 1217
VspI ATTAAT 1 cut(s) 984
XagI CCTNNNNNAGG 2 cut(s) 1287, 1745
XapI RAATTY 5 cut(s) 235, 403, 496, 688, 793
XbaI TCTAGA 1 cut(s) 2195
XceI RCATGY 4 cut(s) 652, 1718, 2778, 2846
XcmI CCANNNNNNNNNTGG 1 cut(s) 1963
XmnI GAANNNNTTC 1 cut(s) 1317
XspI CTAG 5 cut(s) 549, 1308, 1799, 2196, 2558
ZrmI AGTACT 1 cut(s) 1297
Zsp2I ATGCAT 3 cut(s) 1545, 1716, 2185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.