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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G49490 |
| fragaria_vesca | FvH4_7g33030 FvH4_7g33030 FvH4_7g33030 FvH4_7g33030 FvH4_7g33030 FvH4_7g33030 FvH4_7g33030 FvH4_7g33030 FvH4_7g33030 |
| malus_domestica | MD01G1229500.v1.1 MD07G1301500.v1.1 |
| prunus_persica | Prupe.2G320100_v2.0.a1 Prupe.2G320100_v2.0.a1 Prupe.2G320100_v2.0.a1 Prupe.2G320100_v2.0.a1 Prupe.2G320100_v2.0.a1 Prupe.2G320100_v2.0.a1 Prupe.2G320100_v2.0.a1 Prupe.2G320100_v2.0.a1 Prupe.2G320100_v2.0.a1 |
| pyrus_communis | pycom01g23760 pycom07g27420 |
| rosa_chinensis | RchiOBHm_Chr1g0383041 |
| rosa_laevigata | RLG00000026136 |
| rosa_roxburghii | Rroxscaffold_1G00018270 Rroxscaffold_4G00277660 |
| rosa_rugosa | Rorug01G0437900 |
| rosa_samantha | Rh1AG463600 Rh1BG420700 Rh1CG434200 Rh1DG453300 Rh5BG423200 |
| rosa_wichuraiana | Rw1G040860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2438, 3068 |
| AccB1I | GGYRCC | 3 cut(s) | 76, 484, 925 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1289, 2089 |
| AccBSI | CCGCTC | 1 cut(s) | 97 |
| AccI | GTMKAC | 3 cut(s) | 590, 953, 1185 |
| AccIII | TCCGGA | 2 cut(s) | 907, 1109 |
| AciI | CCGC | 5 cut(s) | 97, 407, 1379, 2330, 2860 |
| AcoI | YGGCCR | 3 cut(s) | 3051, 3265, 3297 |
| AcuI | CTGAAG | 8 cut(s) | 1056, 1533, 1686, 2363, 2604, 2778, 2976, 3177 |
| AcyI | GRCGYC | 1 cut(s) | 2175 |
| AfaI | GTAC | 5 cut(s) | 331, 563, 1634, 2272, 2561 |
| AflII | CTTAAG | 1 cut(s) | 2851 |
| AflIII | ACRYGT | 3 cut(s) | 1354, 1598, 3622 |
| AjiI | CACGTC | 1 cut(s) | 1011 |
| AjnI | CCWGG | 6 cut(s) | 1959, 2793, 2991, 3220, 3363, 3544 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1203, 1235 |
| Alw21I | GWGCWC | 1 cut(s) | 3605 |
| Alw26I | GTCTC | 5 cut(s) | 1167, 1821, 1980, 3066, 3142 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2089 |
| Ama87I | CYCGRG | 1 cut(s) | 3321 |
| Aor13HI | TCCGGA | 2 cut(s) | 907, 1109 |
| ApeKI | GCWGC | 5 cut(s) | 176, 1121, 1551, 2122, 2208 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2453, 2485 |
| AseI | ATTAAT | 1 cut(s) | 1803 |
| AspA2I | CCTAGG | 2 cut(s) | 1225, 2978 |
| AspS9I | GGNCC | 8 cut(s) | 32, 573, 620, 1315, 1523, 2970, 3188, 3407 |
| AsuC2I | CCSGG | 2 cut(s) | 1338, 3077 |
| AsuHPI | GGTGA | 9 cut(s) | 169, 238, 482, 927, 1214, 1452, 2244, 2793, 2967 |
| AvaI | CYCGRG | 1 cut(s) | 3321 |
| AvaII | GGWCC | 4 cut(s) | 32, 620, 1315, 1523 |
| AvrII | CCTAGG | 2 cut(s) | 1225, 2978 |
| BaeGI | GKGCMC | 1 cut(s) | 237 |
| BalI | TGGCCA | 2 cut(s) | 3053, 3299 |
| BamHI | GGATCC | 3 cut(s) | 890, 1435, 2365 |
| BanI | GGYRCC | 3 cut(s) | 76, 484, 925 |
| BanII | GRGCYC | 1 cut(s) | 125 |
| BauI | CACGAG | 2 cut(s) | 3141, 3149 |
| BbsI | GAAGAC | 2 cut(s) | 1017, 1757 |
| Bbv12I | GWGCWC | 1 cut(s) | 3605 |
| BbvI | GCAGC | 5 cut(s) | 163, 1133, 1538, 2109, 2195 |
| BciT130I | CCWGG | 6 cut(s) | 1961, 2795, 2993, 3222, 3365, 3546 |
| BciVI | GTATCC | 1 cut(s) | 3112 |
| BclI | TGATCA | 5 cut(s) | 388, 493, 2190, 3555, 3595 |
| BcnI | CCSGG | 2 cut(s) | 1338, 3077 |
| BcoDI | GTCTC | 5 cut(s) | 1167, 1821, 1980, 3066, 3142 |
| BfaI | CTAG | 8 cut(s) | 414, 501, 993, 1226, 1544, 2355, 2967, 2979 |
| BfmI | CTRYAG | 4 cut(s) | 1056, 2016, 3334, 3348 |
| BfrI | CTTAAG | 1 cut(s) | 2851 |
| BfuI | GTATCC | 1 cut(s) | 3112 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1215 |
| BisI | GCNGC | 9 cut(s) | 98, 177, 408, 1122, 1380, 1552, 2123, 2209, 2330 |
| BlnI | CCTAGG | 2 cut(s) | 1225, 2978 |
| BlsI | GCNGC | 9 cut(s) | 99, 178, 409, 1123, 1381, 1553, 2124, 2210, 2331 |
| BmcAI | AGTACT | 1 cut(s) | 2272 |
| Bme1390I | CCNGG | 8 cut(s) | 1338, 1961, 2795, 2993, 3077, 3222, 3365, 3546 |
| Bme18I | GGWCC | 4 cut(s) | 32, 620, 1315, 1523 |
| BmeT110I | CYCGRG | 1 cut(s) | 3321 |
| BmgBI | CACGTC | 1 cut(s) | 1011 |
| BmgT120I | GGNCC | 8 cut(s) | 32, 573, 620, 1315, 1523, 2970, 3188, 3407 |
| BmrFI | CCNGG | 8 cut(s) | 1338, 1961, 2795, 2993, 3077, 3222, 3365, 3546 |
| BmrI | ACTGGG | 2 cut(s) | 219, 2732 |
| BmsI | GCATC | 9 cut(s) | 782, 979, 1108, 1366, 1517, 2014, 2076, 2953, 3094 |
| BmuI | ACTGGG | 2 cut(s) | 219, 2732 |
| BpiI | GAAGAC | 2 cut(s) | 1017, 1757 |
| BpmI | CTGGAG | 2 cut(s) | 2777, 2975 |
| Bpu10I | CCTNAGC | 1 cut(s) | 108 |
| BpuEI | CTTGAG | 3 cut(s) | 1189, 1822, 2799 |
| BpuMI | CCSGG | 2 cut(s) | 1338, 3077 |
| BsaHI | GRCGYC | 1 cut(s) | 2175 |
| BsaI | GGTCTC | 2 cut(s) | 3066, 3142 |
| BsaWI | WCCGGW | 2 cut(s) | 907, 1109 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 238, 268, 1912, 1942 |
| Bse118I | RCCGGY | 4 cut(s) | 1051, 1624, 3263, 3584 |
| Bse1I | ACTGG | 8 cut(s) | 132, 209, 225, 515, 2662, 2738, 3022, 3277 |
| Bse3DI | GCAATG | 3 cut(s) | 1309, 1561, 2774 |
| BseAI | TCCGGA | 2 cut(s) | 907, 1109 |
| BseBI | CCWGG | 6 cut(s) | 1961, 2795, 2993, 3222, 3365, 3546 |
| BseMI | GCAATG | 3 cut(s) | 1309, 1561, 2774 |
| BseMII | CTCAG | 8 cut(s) | 153, 611, 1416, 2507, 2527, 2561, 2706, 3240 |
| BseNI | ACTGG | 8 cut(s) | 132, 209, 225, 515, 2662, 2738, 3022, 3277 |
| BseRI | GAGGAG | 3 cut(s) | 204, 1411, 3650 |
| BseSI | GKGCMC | 1 cut(s) | 237 |
| BseXI | GCAGC | 5 cut(s) | 163, 1133, 1538, 2109, 2195 |
| BseYI | CCCAGC | 2 cut(s) | 259, 1651 |
| BsgI | GTGCAG | 1 cut(s) | 1950 |
| BshNI | GGYRCC | 3 cut(s) | 76, 484, 925 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3605 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3321 |
| BsiSI | CCGG | 8 cut(s) | 908, 1052, 1110, 1338, 1625, 3076, 3264, 3585 |
| BslFI | GGGAC | 3 cut(s) | 28, 663, 1827 |
| BsmAI | GTCTC | 5 cut(s) | 1167, 1821, 1980, 3066, 3142 |
| BsmBI | CGTCTC | 1 cut(s) | 1980 |
| BsmFI | GGGAC | 3 cut(s) | 28, 663, 1827 |
| BsmI | GAATGC | 4 cut(s) | 263, 1218, 1852, 2358 |
| Bso31I | GGTCTC | 2 cut(s) | 3066, 3142 |
| BsoBI | CYCGRG | 1 cut(s) | 3321 |
| Bsp1286I | GDGCHC | 3 cut(s) | 125, 237, 3605 |
| Bsp13I | TCCGGA | 2 cut(s) | 907, 1109 |
| Bsp1407I | TGTACA | 1 cut(s) | 2559 |
| BspACI | CCGC | 5 cut(s) | 97, 407, 1379, 2330, 2860 |
| BspCNI | CTCAG | 8 cut(s) | 154, 610, 1417, 2506, 2526, 2560, 2707, 3239 |
| BspEI | TCCGGA | 2 cut(s) | 907, 1109 |
| BspHI | TCATGA | 2 cut(s) | 2404, 3627 |
| BspT107I | GGYRCC | 3 cut(s) | 76, 484, 925 |
| BspTI | CTTAAG | 1 cut(s) | 2851 |
| BspTNI | GGTCTC | 2 cut(s) | 3066, 3142 |
| BsrBI | CCGCTC | 1 cut(s) | 97 |
| BsrDI | GCAATG | 3 cut(s) | 1309, 1561, 2774 |
| BsrFI | RCCGGY | 4 cut(s) | 1051, 1624, 3263, 3584 |
| BsrGI | TGTACA | 1 cut(s) | 2559 |
| BsrI | ACTGG | 8 cut(s) | 132, 209, 225, 515, 2662, 2738, 3022, 3277 |
| BssAI | RCCGGY | 4 cut(s) | 1051, 1624, 3263, 3584 |
| BssNAI | GTATAC | 1 cut(s) | 591 |
| BssNI | GRCGYC | 1 cut(s) | 2175 |
| BssSI | CACGAG | 2 cut(s) | 3141, 3149 |
| BssT1I | CCWWGG | 6 cut(s) | 537, 1225, 1311, 2978, 3132, 3403 |
| Bst1107I | GTATAC | 1 cut(s) | 591 |
| Bst2BI | CACGAG | 2 cut(s) | 3141, 3149 |
| Bst2UI | CCWGG | 6 cut(s) | 1961, 2795, 2993, 3222, 3365, 3546 |
| Bst4CI | ACNGT | 7 cut(s) | 91, 316, 435, 758, 2144, 3335, 3352 |
| Bst6I | CTCTTC | 5 cut(s) | 583, 1108, 1509, 2283, 2478 |
| BstACI | GRCGYC | 1 cut(s) | 2175 |
| BstAFI | CTTAAG | 1 cut(s) | 2851 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1127 |
| BstAUI | TGTACA | 1 cut(s) | 2559 |
| BstC8I | GCNNGC | 6 cut(s) | 304, 308, 362, 2300, 3127, 3567 |
| BstDSI | CCRYGG | 2 cut(s) | 90, 480 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1815, 2977, 3351 |
| BstMAI | GTCTC | 5 cut(s) | 1167, 1821, 1980, 3066, 3142 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 205, 1127, 1215, 1557, 2183, 2957, 3018 |
| BstNI | CCWGG | 6 cut(s) | 1961, 2795, 2993, 3222, 3365, 3546 |
| BstNSI | RCATGY | 6 cut(s) | 364, 1358, 1602, 2329, 3171, 3626 |
| BstSCI | CCNGG | 8 cut(s) | 1336, 1959, 2793, 2991, 3075, 3220, 3363, 3544 |
| BstSFI | CTRYAG | 4 cut(s) | 1056, 2016, 3334, 3348 |
| BstSLI | GKGCMC | 1 cut(s) | 237 |
| BstV1I | GCAGC | 5 cut(s) | 163, 1133, 1538, 2109, 2195 |
| BstV2I | GAAGAC | 2 cut(s) | 1017, 1757 |
| BstX2I | RGATCY | 5 cut(s) | 800, 890, 1435, 2365, 2982 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 630 |
| BstYI | RGATCY | 5 cut(s) | 800, 890, 1435, 2365, 2982 |
| BstZ17I | GTATAC | 1 cut(s) | 591 |
| BsuI | GTATCC | 1 cut(s) | 3112 |
| BtgI | CCRYGG | 2 cut(s) | 90, 480 |
| BtrI | CACGTC | 1 cut(s) | 1011 |
| BtsI | GCAGTG | 2 cut(s) | 1277, 2685 |
| BtsIMutI | CAGTG | 9 cut(s) | 125, 237, 279, 605, 906, 1277, 1710, 2521, 2685 |
| Cac8I | GCNNGC | 6 cut(s) | 304, 308, 362, 2300, 3127, 3567 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2089 |
| CciI | TCATGA | 2 cut(s) | 2404, 3627 |
| Cfr10I | RCCGGY | 4 cut(s) | 1051, 1624, 3263, 3584 |
| Cfr13I | GGNCC | 8 cut(s) | 32, 573, 620, 1315, 1523, 2970, 3188, 3407 |
| CseI | GACGC | 2 cut(s) | 2183, 3518 |
| Csp6I | GTAC | 5 cut(s) | 330, 562, 1633, 2271, 2560 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1671, 1706 |
| CviQI | GTAC | 5 cut(s) | 330, 562, 1633, 2271, 2560 |
| DraI | TTTAAA | 2 cut(s) | 1327, 1504 |
| EaeI | YGGCCR | 3 cut(s) | 3051, 3265, 3297 |
| Eam1104I | CTCTTC | 5 cut(s) | 583, 1108, 1509, 2283, 2478 |
| EarI | CTCTTC | 5 cut(s) | 583, 1108, 1509, 2283, 2478 |
| Eco130I | CCWWGG | 6 cut(s) | 537, 1225, 1311, 2978, 3132, 3403 |
| Eco147I | AGGCCT | 1 cut(s) | 3565 |
| Eco24I | GRGCYC | 1 cut(s) | 125 |
| Eco31I | GGTCTC | 2 cut(s) | 3066, 3142 |
| Eco32I | GATATC | 1 cut(s) | 2080 |
| Eco47I | GGWCC | 4 cut(s) | 32, 620, 1315, 1523 |
| Eco57I | CTGAAG | 8 cut(s) | 1056, 1533, 1686, 2363, 2604, 2778, 2976, 3177 |
| Eco88I | CYCGRG | 1 cut(s) | 3321 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1815, 2977, 3351 |
| EcoO109I | RGGNCCY | 3 cut(s) | 32, 573, 2970 |
| EcoRI | GAATTC | 2 cut(s) | 187, 1105 |
| EcoRII | CCWGG | 6 cut(s) | 1959, 2793, 2991, 3220, 3363, 3544 |
| EcoRV | GATATC | 1 cut(s) | 2080 |
| EcoT14I | CCWWGG | 6 cut(s) | 537, 1225, 1311, 2978, 3132, 3403 |
| EcoT22I | ATGCAT | 2 cut(s) | 379, 3274 |
| EcoT38I | GRGCYC | 1 cut(s) | 125 |
| ErhI | CCWWGG | 6 cut(s) | 537, 1225, 1311, 2978, 3132, 3403 |
| Esp3I | CGTCTC | 1 cut(s) | 1980 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 562, 594 |
| FaqI | GGGAC | 3 cut(s) | 28, 663, 1827 |
| FauNDI | CATATG | 1 cut(s) | 2050 |
| FbaI | TGATCA | 5 cut(s) | 388, 493, 2190, 3555, 3595 |
| FblI | GTMKAC | 3 cut(s) | 590, 953, 1185 |
| Fnu4HI | GCNGC | 9 cut(s) | 98, 177, 408, 1122, 1380, 1552, 2123, 2209, 2330 |
| FriOI | GRGCYC | 1 cut(s) | 125 |
| Fsp4HI | GCNGC | 9 cut(s) | 98, 177, 408, 1122, 1380, 1552, 2123, 2209, 2330 |
| FspBI | CTAG | 8 cut(s) | 414, 501, 993, 1226, 1544, 2355, 2967, 2979 |
| GluI | GCNGC | 9 cut(s) | 98, 177, 408, 1122, 1380, 1552, 2123, 2209, 2330 |
| GsaI | CCCAGC | 2 cut(s) | 263, 1655 |
| GsuI | CTGGAG | 2 cut(s) | 2777, 2975 |
| HapII | CCGG | 8 cut(s) | 908, 1052, 1110, 1338, 1625, 3076, 3264, 3585 |
| HgaI | GACGC | 2 cut(s) | 2183, 3518 |
| Hin1I | GRCGYC | 1 cut(s) | 2175 |
| HincII | GTYRAC | 4 cut(s) | 319, 2337, 2941, 3328 |
| HindII | GTYRAC | 4 cut(s) | 319, 2337, 2941, 3328 |
| HindIII | AAGCTT | 1 cut(s) | 2036 |
| HpaII | CCGG | 8 cut(s) | 908, 1052, 1110, 1338, 1625, 3076, 3264, 3585 |
| HphI | GGTGA | 9 cut(s) | 169, 238, 482, 927, 1214, 1452, 2244, 2793, 2967 |
| HpyAV | CCTTC | 8 cut(s) | 288, 375, 927, 1252, 1865, 1877, 3155, 3625 |
| HpyCH4III | ACNGT | 7 cut(s) | 91, 316, 435, 758, 2144, 3335, 3352 |
| HpyCH4IV | ACGT | 1 cut(s) | 1010 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 205, 1127, 1215, 1557, 2183, 2957, 3018 |
| HpySE526I | ACGT | 1 cut(s) | 1010 |
| Hsp92I | GRCGYC | 1 cut(s) | 2175 |
| Kpn2I | TCCGGA | 2 cut(s) | 907, 1109 |
| Ksp22I | TGATCA | 5 cut(s) | 388, 493, 2190, 3555, 3595 |
| LmnI | GCTCC | 5 cut(s) | 94, 213, 538, 2356, 3134 |
| Lsp1109I | GCAGC | 5 cut(s) | 163, 1133, 1538, 2109, 2195 |
| LweI | GCATC | 9 cut(s) | 782, 979, 1108, 1366, 1517, 2014, 2076, 2953, 3094 |
| MaeI | CTAG | 8 cut(s) | 414, 501, 993, 1226, 1544, 2355, 2967, 2979 |
| MaeII | ACGT | 1 cut(s) | 1010 |
| MaeIII | GTNAC | 7 cut(s) | 157, 1006, 2459, 2799, 3338, 3473, 3548 |
| MbiI | CCGCTC | 1 cut(s) | 97 |
| MfeI | CAATTG | 1 cut(s) | 2131 |
| MflI | RGATCY | 5 cut(s) | 800, 890, 1435, 2365, 2982 |
| MhlI | GDGCHC | 3 cut(s) | 125, 237, 3605 |
| MlsI | TGGCCA | 2 cut(s) | 3053, 3299 |
| MluNI | TGGCCA | 2 cut(s) | 3053, 3299 |
| MmeI | TCCRAC | 2 cut(s) | 977, 1448 |
| Mox20I | TGGCCA | 2 cut(s) | 3053, 3299 |
| Mph1103I | ATGCAT | 2 cut(s) | 379, 3274 |
| MroI | TCCGGA | 2 cut(s) | 907, 1109 |
| MscI | TGGCCA | 2 cut(s) | 3053, 3299 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2532 |
| Msp20I | TGGCCA | 2 cut(s) | 3053, 3299 |
| MspA1I | CMGCKG | 2 cut(s) | 1451, 3654 |
| MspCI | CTTAAG | 1 cut(s) | 2851 |
| MspI | CCGG | 8 cut(s) | 908, 1052, 1110, 1338, 1625, 3076, 3264, 3585 |
| MspR9I | CCNGG | 8 cut(s) | 1338, 1961, 2795, 2993, 3077, 3222, 3365, 3546 |
| MunI | CAATTG | 1 cut(s) | 2131 |
| Mva1269I | GAATGC | 4 cut(s) | 263, 1218, 1852, 2358 |
| MvaI | CCWGG | 6 cut(s) | 1961, 2795, 2993, 3222, 3365, 3546 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 205, 1127, 1215, 1557, 2183, 2957, 3018 |
| NciI | CCSGG | 2 cut(s) | 1338, 3077 |
| NdeI | CATATG | 1 cut(s) | 2050 |
| NmeAIII | GCCGAG | 1 cut(s) | 1194 |
| NmuCI | GTSAC | 7 cut(s) | 157, 1006, 2459, 2799, 3338, 3473, 3548 |
| NsiI | ATGCAT | 2 cut(s) | 379, 3274 |
| NspI | RCATGY | 6 cut(s) | 364, 1358, 1602, 2329, 3171, 3626 |
| PaeI | GCATGC | 1 cut(s) | 364 |
| PagI | TCATGA | 2 cut(s) | 2404, 3627 |
| PceI | AGGCCT | 1 cut(s) | 3565 |
| PciI | ACATGT | 3 cut(s) | 1354, 1598, 3622 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1486, 2623 |
| PctI | GAATGC | 4 cut(s) | 263, 1218, 1852, 2358 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1289, 2089 |
| PfoI | TCCNGGA | 3 cut(s) | 2793, 2991, 3363 |
| PkrI | GCNGC | 9 cut(s) | 99, 178, 409, 1123, 1381, 1553, 2124, 2210, 2331 |
| PpuMI | RGGWCCY | 1 cut(s) | 32 |
| PscI | ACATGT | 3 cut(s) | 1354, 1598, 3622 |
| PshBI | ATTAAT | 1 cut(s) | 1803 |
| PsiI | TTATAA | 2 cut(s) | 2438, 3068 |
| Psp5II | RGGWCCY | 1 cut(s) | 32 |
| Psp6I | CCWGG | 6 cut(s) | 1959, 2793, 2991, 3220, 3363, 3544 |
| PspFI | CCCAGC | 2 cut(s) | 259, 1651 |
| PspGI | CCWGG | 6 cut(s) | 1959, 2793, 2991, 3220, 3363, 3544 |
| PspPI | GGNCC | 8 cut(s) | 32, 573, 620, 1315, 1523, 2970, 3188, 3407 |
| PspPPI | RGGWCCY | 1 cut(s) | 32 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1176, 1208 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2089 |
| PsuI | RGATCY | 5 cut(s) | 800, 890, 1435, 2365, 2982 |
| PvuII | CAGCTG | 2 cut(s) | 1451, 3654 |
| RsaI | GTAC | 5 cut(s) | 331, 563, 1634, 2272, 2561 |
| RsaNI | GTAC | 5 cut(s) | 330, 562, 1633, 2271, 2560 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2532 |
| SatI | GCNGC | 9 cut(s) | 98, 177, 408, 1122, 1380, 1552, 2123, 2209, 2330 |
| Sau96I | GGNCC | 8 cut(s) | 32, 573, 620, 1315, 1523, 2970, 3188, 3407 |
| ScaI | AGTACT | 1 cut(s) | 2272 |
| ScrFI | CCNGG | 8 cut(s) | 1338, 1961, 2795, 2993, 3077, 3222, 3365, 3546 |
| SduI | GDGCHC | 3 cut(s) | 125, 237, 3605 |
| SfaNI | GCATC | 9 cut(s) | 782, 979, 1108, 1366, 1517, 2014, 2076, 2953, 3094 |
| SfcI | CTRYAG | 4 cut(s) | 1056, 2016, 3334, 3348 |
| SinI | GGWCC | 4 cut(s) | 32, 620, 1315, 1523 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2532 |
| SmlI | CTYRAG | 4 cut(s) | 1204, 1837, 2814, 2851 |
| SmoI | CTYRAG | 4 cut(s) | 1204, 1837, 2814, 2851 |
| SphI | GCATGC | 1 cut(s) | 364 |
| SseBI | AGGCCT | 1 cut(s) | 3565 |
| SsiI | CCGC | 5 cut(s) | 97, 407, 1379, 2330, 2860 |
| SspI | AATATT | 1 cut(s) | 3208 |
| SspMI | CTAG | 8 cut(s) | 414, 501, 993, 1226, 1544, 2355, 2967, 2979 |
| StuI | AGGCCT | 1 cut(s) | 3565 |
| StyD4I | CCNGG | 8 cut(s) | 1336, 1959, 2793, 2991, 3075, 3220, 3363, 3544 |
| StyI | CCWWGG | 6 cut(s) | 537, 1225, 1311, 2978, 3132, 3403 |
| TaaI | ACNGT | 7 cut(s) | 91, 316, 435, 758, 2144, 3335, 3352 |
| TaiI | ACGT | 1 cut(s) | 1013 |
| TaqI | TCGA | 7 cut(s) | 59, 119, 267, 670, 1992, 2466, 2708 |
| TatI | WGTACW | 5 cut(s) | 329, 561, 1632, 2270, 2559 |
| TauI | GCSGC | 4 cut(s) | 100, 410, 1382, 2332 |
| TscAI | CASTG | 9 cut(s) | 132, 237, 279, 605, 906, 1284, 1710, 2521, 2692 |
| TseFI | GTSAC | 7 cut(s) | 157, 1006, 2459, 2799, 3338, 3473, 3548 |
| TseI | GCWGC | 5 cut(s) | 176, 1121, 1551, 2122, 2208 |
| Tsp45I | GTSAC | 7 cut(s) | 157, 1006, 2459, 2799, 3338, 3473, 3548 |
| TspGWI | ACGGA | 2 cut(s) | 633, 3280 |
| TspRI | CASTG | 9 cut(s) | 132, 237, 279, 605, 906, 1284, 1710, 2521, 2692 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1289, 2089 |
| Vha464I | CTTAAG | 1 cut(s) | 2851 |
| VpaK11BI | GGWCC | 4 cut(s) | 32, 620, 1315, 1523 |
| VspI | ATTAAT | 1 cut(s) | 1803 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1815, 2977, 3351 |
| XceI | RCATGY | 6 cut(s) | 364, 1358, 1602, 2329, 3171, 3626 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2071 |
| XmaJI | CCTAGG | 2 cut(s) | 1225, 2978 |
| XmiI | GTMKAC | 3 cut(s) | 590, 953, 1185 |
| XspI | CTAG | 8 cut(s) | 414, 501, 993, 1226, 1544, 2355, 2967, 2979 |
| ZrmI | AGTACT | 1 cut(s) | 2272 |
| Zsp2I | ATGCAT | 2 cut(s) | 379, 3274 |