AT3G50660

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
18813949 .. 18817405
3457 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G50660.1

Sequence Viewer

Length: 1542 bp
ATGTTCGAAACAGAGCATCATACTCTCTTACCTCTTCTTCTTCTCCCATCGCTTTTGTCTCTTCTTCTCTTCTTGATTCTCTTGAAGAGAAGAAATAGAAAAACCAGATTCAATCTACCTCCGGGTAAATCCGGTTGGCCATTTCTTGGTGAAACCATCGGTTATCTTAAACCGTACACCGCCACAACACTCGGTGACTTCATGCAACAACATGTCTCCAAGTATGGTAAGATATATAGATCGAACTTGTTTGGAGAACCAACGATCGTATCAGCTGATGCTGGACTTAATAGATTCATATTACAAAACGAAGGAAGGCTCTTTGAATGTAGTTATCCTAGAAGTATAGGTGGGATTCTTGGGAAATGGTCGATGCTTGTTCTTGTTGGTGACATGCATAGAGATATGAGAAGTATCTCGCTTAACTTCTTAAGTCACGCACGTCTTAGAACTATTCTACTTAAAGATGTTGAGAGACATACTTTGTTTGTTCTTGATTCTTGGCAACAAAACTCTATTTTCTCTGCTCAAGACGAGGCCAAAAAGTTTACGTTTAATCTAATGGCGAAGCATATAATGAGTATGGATCCTGGAGAAGAAGAAACAGAGCAATTAAAGAAAGAGTATGTAACTTTCATGAAAGGAGTTGTCTCTGCTCCTCTAAATCTACCAGGAACTGCTTATCATAAAGCTCTTCAGTCACGAGCAACGATATTGAAGTTCATTGAGAGGAAAATGGAAGAGAGAAAATTGGATATCAAGGAAGAAGATCAAGAAGAAGAAGAAGTGAAAACAGAGGATGAAGCAGAGATGAGTAAGAGTGATCATGTTAGGAAACAAAGAACAGACGATGATCTTTTGGGATGGGTTTTGAAACATTCGAATTTATCGACGGAGCAAATTCTCGATCTCATTCTTAGTTTGTTATTTGCCGGACATGAGACTTCTTCTGTAGCCATTGCTCTCGCTATCTTCTTCTTGCAAGCTTGCCCTAAAGCCGTTGAAGAGCTTAGGGAAGAGCATCTTGAGATCGCGAGGGCCAAGAAGGAACTAGGAGAGTCAGAATTAAATTGGGATGATTACAAGAAAATGGACTTTACTCAATGTGTTATAAATGAAACTCTTCGATTGGGAAATGTAGTTAGGTTTTTGCATCGCAAAGCACTCAAAGATGTTCGGTACAAAGGATACGATATCCCTAGTGGGTGGAAAGTGTTACCGGTGATCTCAGCCGTACATTTGGATAATTCTCGTTATGACCAACCTAATCTCTTTAATCCTTGGAGATGGCAACAGCAAAACAACGGAGCGTCATCCTCAGGAAGTGGTAGTTTTTCGACGTGGGGAAACAACTACATGCCGTTTGGAGGAGGGCCAAGGCTATGTGCTGGTTCAGAGCTAGCCAAGTTAGAAATGGCAGTGTTTATTCATCATCTAGTTCTTAAATTCAATTGGGAATTAGCAGAAGATGATAAACCATTTGCTTTTCCTTTTGTTGATTTTCCTAACGGTTTGCCTATTAGGGTTTCTCGTATTCTGTAA

Protein Analysis

513

Amino Acids

58.87

Weight (kDa)

6.78

Isoelectric Point (pI)

48.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 493 3.3e-61 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1112
AccB7I CCANNNNNTGG 1 cut(s) 146
AccII CGCG 1 cut(s) 1034
AciI CCGC 1 cut(s) 180
AclWI GGATC 2 cut(s) 581, 594
AcoI YGGCCR 1 cut(s) 137
AcsI RAATTY 3 cut(s) 883, 900, 1445
AcuI CTGAAG 1 cut(s) 680
AdeI CACNNNGTG 1 cut(s) 194
AfaI GTAC 3 cut(s) 176, 1181, 1236
AfiI CCNNNNNNNGG 2 cut(s) 146, 1367
AflII CTTAAG 1 cut(s) 430
AflIII ACRYGT 1 cut(s) 211
AgeI ACCGGT 1 cut(s) 1219
AgsI TTSAA 7 cut(s) 85, 112, 326, 718, 874, 1004, 1450
AjiI CACGTC 2 cut(s) 443, 1341
AjnI CCWGG 2 cut(s) 589, 670
AluBI AGCT 5 cut(s) 275, 692, 986, 1009, 1399
AluI AGCT 5 cut(s) 275, 692, 986, 1009, 1399
Alw26I GTCTC 5 cut(s) 63, 220, 469, 655, 935
AlwI GGATC 2 cut(s) 581, 594
AlwNI CAGNNNCTG 1 cut(s) 677
AoxI GGCC 4 cut(s) 137, 537, 1038, 1373
ApoI RAATTY 3 cut(s) 883, 900, 1445
AsiGI ACCGGT 1 cut(s) 1219
Asp700I GAANNNNTTC 1 cut(s) 1122
AspS9I GGNCC 2 cut(s) 1038, 1373
AsuC2I CCSGG 1 cut(s) 123
AsuHPI GGTGA 4 cut(s) 161, 206, 401, 1234
AsuII TTCGAA 2 cut(s) 6, 881
AsuNHI GCTAGC 1 cut(s) 1399
AxyI CCTNAGG 1 cut(s) 1318
BaeI ACNNNNGTAYC 2 cut(s) 252, 285
BalI TGGCCA 1 cut(s) 139
BamHI GGATCC 1 cut(s) 586
BauI CACGAG 1 cut(s) 702
BccI CCATC 4 cut(s) 55, 164, 858, 1281
BceAI ACGGC 3 cut(s) 983, 1217, 1345
BciT130I CCWGG 2 cut(s) 591, 672
BciVI GTATCC 1 cut(s) 1181
BclI TGATCA 1 cut(s) 823
BcnI CCSGG 1 cut(s) 123
BcoDI GTCTC 5 cut(s) 63, 220, 469, 655, 935
BfaI CTAG 5 cut(s) 339, 1052, 1200, 1400, 1436
BfmI CTRYAG 1 cut(s) 951
BfrI CTTAAG 1 cut(s) 430
BfuI GTATCC 1 cut(s) 1181
Bme1390I CCNGG 3 cut(s) 123, 591, 672
BmgBI CACGTC 2 cut(s) 443, 1341
BmgT120I GGNCC 2 cut(s) 1038, 1373
BmiI GGNNCC 1 cut(s) 588
BmrFI CCNGG 3 cut(s) 123, 591, 672
BmsI GCATC 5 cut(s) 25, 268, 363, 1030, 1162
BmtI GCTAGC 1 cut(s) 1403
BpmI CTGGAG 1 cut(s) 612
Bpu10I CCTNAGC 1 cut(s) 1010
Bpu14I TTCGAA 2 cut(s) 6, 881
BpuEI CTTGAG 2 cut(s) 513, 1046
BpuMI CCSGG 1 cut(s) 123
BsaJI CCNNGG 2 cut(s) 1280, 1376
BsaWI WCCGGW 2 cut(s) 131, 1219
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 1367
Bse118I RCCGGY 1 cut(s) 1219
Bse21I CCTNAGG 1 cut(s) 1318
Bse3DI GCAATG 1 cut(s) 957
BseBI CCWGG 2 cut(s) 591, 672
BseDI CCNNGG 2 cut(s) 1280, 1376
BseGI GGATG 4 cut(s) 805, 869, 1081, 1313
BseLI CCNNNNNNNGG 2 cut(s) 146, 1367
BseMI GCAATG 1 cut(s) 957
BseMII CTCAG 2 cut(s) 1242, 1332
BseRI GAGGAG 2 cut(s) 648, 1383
Bsh1236I CGCG 1 cut(s) 1034
Bsh1285I CGRYCG 1 cut(s) 267
BshFI GGCC 4 cut(s) 139, 539, 1040, 1375
BshTI ACCGGT 1 cut(s) 1219
BsiEI CGRYCG 1 cut(s) 267
BsiSI CCGG 4 cut(s) 122, 132, 933, 1220
BslI CCNNNNNNNGG 2 cut(s) 146, 1367
BsmAI GTCTC 5 cut(s) 63, 220, 469, 655, 935
BsnI GGCC 4 cut(s) 139, 539, 1040, 1375
Bsp119I TTCGAA 2 cut(s) 6, 881
Bsp143I GATC 9 cut(s) 239, 264, 586, 769, 823, 853, 907, 1029, 1224
Bsp68I TCGCGA 1 cut(s) 1034
BspACI CCGC 1 cut(s) 180
BspANI GGCC 4 cut(s) 139, 539, 1040, 1375
BspCNI CTCAG 2 cut(s) 1241, 1331
BspFNI CGCG 1 cut(s) 1034
BspHI TCATGA 1 cut(s) 636
BspLI GGNNCC 1 cut(s) 588
BspOI GCTAGC 1 cut(s) 1403
BspPI GGATC 2 cut(s) 581, 594
BspQI GCTCTTC 3 cut(s) 699, 999, 1011
BspT104I TTCGAA 2 cut(s) 6, 881
BspTI CTTAAG 1 cut(s) 430
BsrDI GCAATG 1 cut(s) 957
BsrFI RCCGGY 1 cut(s) 1219
BssAI RCCGGY 1 cut(s) 1219
BssECI CCNNGG 2 cut(s) 1280, 1376
BssMI GATC 9 cut(s) 239, 264, 586, 769, 823, 853, 907, 1029, 1224
BssSI CACGAG 1 cut(s) 702
BssT1I CCWWGG 2 cut(s) 1280, 1376
Bst2BI CACGAG 1 cut(s) 702
Bst2UI CCWGG 2 cut(s) 591, 672
Bst4CI ACNGT 2 cut(s) 174, 1511
Bst6I CTCTTC 9 cut(s) 39, 66, 74, 80, 699, 735, 999, 1011, 1128
BstAFI CTTAAG 1 cut(s) 430
BstBI TTCGAA 2 cut(s) 6, 881
BstC8I GCNNGC 3 cut(s) 984, 988, 1401
BstDEI CTNAG 5 cut(s) 446, 917, 1010, 1228, 1318
BstF5I GGATG 4 cut(s) 805, 869, 1081, 1313
BstFNI CGCG 1 cut(s) 1034
BstKTI GATC 9 cut(s) 242, 267, 589, 772, 826, 856, 910, 1032, 1227
BstMAI GTCTC 5 cut(s) 63, 220, 469, 655, 935
BstMBI GATC 9 cut(s) 239, 264, 586, 769, 823, 853, 907, 1029, 1224
BstMCI CGRYCG 1 cut(s) 267
BstNI CCWGG 2 cut(s) 591, 672
BstNSI RCATGY 3 cut(s) 215, 397, 1360
BstSCI CCNGG 3 cut(s) 121, 589, 670
BstSFI CTRYAG 1 cut(s) 951
BstUI CGCG 1 cut(s) 1034
BstX2I RGATCY 1 cut(s) 586
BstYI RGATCY 1 cut(s) 586
Bsu36I CCTNAGG 1 cut(s) 1318
BsuI GTATCC 1 cut(s) 1181
BsuRI GGCC 4 cut(s) 139, 539, 1040, 1375
BtgZI GCGATG 2 cut(s) 33, 1139
BtrI CACGTC 2 cut(s) 443, 1341
BtsCI GGATG 4 cut(s) 805, 869, 1081, 1313
BtsI GCAGTG 1 cut(s) 1425
BtsIMutI CAGTG 1 cut(s) 1425
BtuMI TCGCGA 1 cut(s) 1034
Cac8I GCNNGC 3 cut(s) 984, 988, 1401
CaiI CAGNNNCTG 1 cut(s) 677
CciI TCATGA 1 cut(s) 636
Cfr10I RCCGGY 1 cut(s) 1219
Cfr13I GGNCC 2 cut(s) 1038, 1373
CseI GACGC 1 cut(s) 1299
Csp6I GTAC 3 cut(s) 175, 1180, 1235
CspAI ACCGGT 1 cut(s) 1219
CviAII CATG 7 cut(s) 202, 212, 394, 637, 827, 938, 1357
CviQI GTAC 3 cut(s) 175, 1180, 1235
DdeI CTNAG 5 cut(s) 446, 917, 1010, 1228, 1318
DpnI GATC 9 cut(s) 241, 266, 588, 771, 825, 855, 909, 1031, 1226
DpnII GATC 9 cut(s) 239, 264, 586, 769, 823, 853, 907, 1029, 1224
DraIII CACNNNGTG 1 cut(s) 194
EaeI YGGCCR 1 cut(s) 137
Eam1104I CTCTTC 9 cut(s) 39, 66, 74, 80, 699, 735, 999, 1011, 1128
EarI CTCTTC 9 cut(s) 39, 66, 74, 80, 699, 735, 999, 1011, 1128
Eco130I CCWWGG 2 cut(s) 1280, 1376
Eco32I GATATC 2 cut(s) 757, 1195
Eco57I CTGAAG 1 cut(s) 680
Eco81I CCTNAGG 1 cut(s) 1318
EcoRII CCWGG 2 cut(s) 589, 670
EcoRV GATATC 2 cut(s) 757, 1195
EcoT14I CCWWGG 2 cut(s) 1280, 1376
EcoT22I ATGCAT 1 cut(s) 399
ErhI CCWWGG 2 cut(s) 1280, 1376
FaeI CATG 7 cut(s) 205, 215, 397, 640, 830, 941, 1360
FalI AAGNNNNNCTT 2 cut(s) 1008, 1040
FatI CATG 7 cut(s) 201, 211, 393, 636, 826, 937, 1356
FbaI TGATCA 1 cut(s) 823
FokI GGATG 4 cut(s) 812, 876, 1088, 1300
FspBI CTAG 5 cut(s) 339, 1052, 1200, 1400, 1436
GsuI CTGGAG 1 cut(s) 612
HaeIII GGCC 4 cut(s) 139, 539, 1040, 1375
HapII CCGG 4 cut(s) 122, 132, 933, 1220
HgaI GACGC 1 cut(s) 1299
Hin1II CATG 7 cut(s) 205, 215, 397, 640, 830, 941, 1360
HindIII AAGCTT 1 cut(s) 984
HinfI GANTC 6 cut(s) 76, 108, 294, 355, 497, 1058
HpaII CCGG 4 cut(s) 122, 132, 933, 1220
HphI GGTGA 4 cut(s) 161, 206, 401, 1234
Hpy166II GTNNAC 2 cut(s) 177, 549
Hpy188I TCNGA 2 cut(s) 1063, 1396
Hpy8I GTNNAC 2 cut(s) 177, 549
Hpy99I CGWCG 2 cut(s) 895, 1342
HpyAV CCTTC 3 cut(s) 305, 309, 1039
HpyCH4III ACNGT 2 cut(s) 174, 1511
HpyCH4IV ACGT 3 cut(s) 442, 551, 1340
HpyCH4V TGCA 4 cut(s) 205, 397, 982, 1153
HpyF3I CTNAG 5 cut(s) 446, 917, 1010, 1228, 1318
HpySE526I ACGT 3 cut(s) 442, 551, 1340
Hsp92II CATG 7 cut(s) 205, 215, 397, 640, 830, 941, 1360
Ksp22I TGATCA 1 cut(s) 823
Kzo9I GATC 9 cut(s) 239, 264, 586, 769, 823, 853, 907, 1029, 1224
LguI GCTCTTC 3 cut(s) 699, 999, 1011
LmnI GCTCC 3 cut(s) 661, 895, 1307
LweI GCATC 5 cut(s) 25, 268, 363, 1030, 1162
MaeI CTAG 5 cut(s) 339, 1052, 1200, 1400, 1436
MaeII ACGT 3 cut(s) 442, 551, 1340
MaeIII GTNAC 6 cut(s) 194, 389, 434, 628, 699, 1215
MalI GATC 9 cut(s) 241, 266, 588, 771, 825, 855, 909, 1031, 1226
MboI GATC 9 cut(s) 239, 264, 586, 769, 823, 853, 907, 1029, 1224
MfeI CAATTG 1 cut(s) 1450
MflI RGATCY 1 cut(s) 586
MlsI TGGCCA 1 cut(s) 139
MluNI TGGCCA 1 cut(s) 139
MlyI GAGTC 1 cut(s) 1067
Mox20I TGGCCA 1 cut(s) 139
Mph1103I ATGCAT 1 cut(s) 399
MroXI GAANNNNTTC 1 cut(s) 1122
MscI TGGCCA 1 cut(s) 139
Msp20I TGGCCA 1 cut(s) 139
MspA1I CMGCKG 1 cut(s) 275
MspCI CTTAAG 1 cut(s) 430
MspI CCGG 4 cut(s) 122, 132, 933, 1220
MspR9I CCNGG 3 cut(s) 123, 591, 672
MunI CAATTG 1 cut(s) 1450
MvaI CCWGG 2 cut(s) 591, 672
MvnI CGCG 1 cut(s) 1034
NciI CCSGG 1 cut(s) 123
NdeII GATC 9 cut(s) 239, 264, 586, 769, 823, 853, 907, 1029, 1224
NheI GCTAGC 1 cut(s) 1399
NlaIII CATG 7 cut(s) 205, 215, 397, 640, 830, 941, 1360
NlaIV GGNNCC 1 cut(s) 588
NmuCI GTSAC 4 cut(s) 194, 389, 434, 699
NruI TCGCGA 1 cut(s) 1034
NsiI ATGCAT 1 cut(s) 399
NspI RCATGY 3 cut(s) 215, 397, 1360
NspV TTCGAA 2 cut(s) 6, 881
PagI TCATGA 1 cut(s) 636
PciI ACATGT 1 cut(s) 211
PciSI GCTCTTC 3 cut(s) 699, 999, 1011
PcsI WCGNNNNNNNCGW 1 cut(s) 887
PdmI GAANNNNTTC 1 cut(s) 1122
PfeI GAWTC 5 cut(s) 76, 108, 294, 355, 497
PflMI CCANNNNNTGG 1 cut(s) 146
PfoI TCCNGGA 1 cut(s) 589
PinAI ACCGGT 1 cut(s) 1219
Ple19I CGATCG 1 cut(s) 267
PleI GAGTC 1 cut(s) 1066
PpsI GAGTC 1 cut(s) 1066
PscI ACATGT 1 cut(s) 211
PsiI TTATAA 1 cut(s) 1112
Psp6I CCWGG 2 cut(s) 589, 670
PspGI CCWGG 2 cut(s) 589, 670
PspN4I GGNNCC 1 cut(s) 588
PspPI GGNCC 2 cut(s) 1038, 1373
PstNI CAGNNNCTG 1 cut(s) 677
PsuI RGATCY 1 cut(s) 586
PvuI CGATCG 1 cut(s) 267
PvuII CAGCTG 1 cut(s) 275
RruI TCGCGA 1 cut(s) 1034
RsaI GTAC 3 cut(s) 176, 1181, 1236
RsaNI GTAC 3 cut(s) 175, 1180, 1235
SapI GCTCTTC 3 cut(s) 699, 999, 1011
Sau3AI GATC 9 cut(s) 239, 264, 586, 769, 823, 853, 907, 1029, 1224
Sau96I GGNCC 2 cut(s) 1038, 1373
SchI GAGTC 1 cut(s) 1067
ScrFI CCNGG 3 cut(s) 123, 591, 672
SfaNI GCATC 5 cut(s) 25, 268, 363, 1030, 1162
SfcI CTRYAG 1 cut(s) 951
SfuI TTCGAA 2 cut(s) 6, 881
SmlI CTYRAG 3 cut(s) 430, 528, 1025
SmoI CTYRAG 3 cut(s) 430, 528, 1025
SsiI CCGC 1 cut(s) 180
SspMI CTAG 5 cut(s) 339, 1052, 1200, 1400, 1436
StyD4I CCNGG 3 cut(s) 121, 589, 670
StyI CCWWGG 2 cut(s) 1280, 1376
TaaI ACNGT 2 cut(s) 174, 1511
TaiI ACGT 3 cut(s) 445, 554, 1343
TaqI TCGA 8 cut(s) 6, 242, 371, 881, 890, 906, 1126, 1337
TfiI GAWTC 5 cut(s) 76, 108, 294, 355, 497
TscAI CASTG 1 cut(s) 1425
TseFI GTSAC 4 cut(s) 194, 389, 434, 699
Tsp45I GTSAC 4 cut(s) 194, 389, 434, 699
TspDTI ATGAA 8 cut(s) 190, 286, 625, 653, 712, 816, 1131, 1418
TspGWI ACGGA 2 cut(s) 908, 1320
TspRI CASTG 1 cut(s) 1425
Van91I CCANNNNNTGG 1 cut(s) 146
Vha464I CTTAAG 1 cut(s) 430
XapI RAATTY 3 cut(s) 883, 900, 1445
XceI RCATGY 3 cut(s) 215, 397, 1360
XcmI CCANNNNNNNNNTGG 1 cut(s) 1411
XmnI GAANNNNTTC 1 cut(s) 1122
XspI CTAG 5 cut(s) 339, 1052, 1200, 1400, 1436
Zsp2I ATGCAT 1 cut(s) 399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.