RLG00000017101

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
12818898 .. 12825408
6511 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017101

Sequence Viewer

Length: 1194 bp
ATGCCAGCCTCCATGTCTGACTCAGAGCTAATCCTCTGTGTTCTTCCCTCAATCTTAACTCTATTCCTCTTACTCATTCTCATCAGAAGAAAGAAGCAGCAACACCAAATCAGAGGACTCAATCTCCCACCAGGAAACATGGGCTGGCCTTTTCTTGGAGAAACCATAGGCTACTTGAAGCCTTACTGTGCAACCTCTACAGGAGAATTCATGGAGCAACATATTTCAAGGTATGGGAAAATTTACAAGTCCAGTTTGTTTGGGGAGCCAACTATAGTTTCAGCTGATGCAGGGCTCAATAGATTCATACTACAAAATGAAGGCAGATTGTTTGAATGTAGCTACCCAAGAAGCATAGGAGGGATTCTTGGAAAATGGTCTATGTTGGTTTTAGTGGGTGACATGCATAGAGATATGAGGACTATATCCCTCAATTTCTTAAGCCATGCCAGACTCAGAACCCATTTGCTGAGAGAAGTTGAGAAACATACTTTGCTTGTTTTGGGGAGCTGGAAAGAGAATTCTGTGTTTTCAGCTCAGGATGAAGCCAAGAAGTCTCGATCAACCATTCTGAAGTTCATTGAGCGCAAAATGGAAGAGAGGGTGAAGGAGGGAAGTGAAAACGTAGGGGAAGATGATCTTCTTGGATGGGAAGAGCACATTGAAATTGTCAAAGCCAAGAAGAAAGCAGGGGAGACAGAGTTGAACTGGGATGACTACAAAAAAATGGAATTCACTCAATGTGTAATAAGTGAGACACTTAGGCTCGGGAACGTGGTGAGGTTTTTACACAGAAAGGCACTGAAAGATGTAAGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTGCTTCCGGTAATTGCAGCCATGCATTTGGATCCTTTGCTTTTTGACTACCCTCAACACTTCAATCCATGGAGATGGCAGCAAAGCAACAGCACGCGATCTTCTTCATCATCAGCATCTTACTCGAGCATGACAAGTAGCAACTTTATGCCATTTGGGGGAGGACCACGACTTTGCGCCGGATCAGAACTGGCCAAGTTAGAAATGGCCGTTTTCATCCACCACCTGGTCCTCAACTACCAGTGGGAGTTGGCCGATTTGGACGACCAAGCTTTCGCATTCCCATTTGTCGACTTTCAGAAAGGACTACAAATCAGAGCTCAGCGCCAAACAAACTTCATATAA

Protein Analysis

398

Amino Acids

45.5

Weight (kDa)

8.74

Isoelectric Point (pI)

48.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 229 - 373 2.1e-37 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1075
AccI GTMKAC 1 cut(s) 1140
AccII CGCG 1 cut(s) 946
AclWI GGATC 3 cut(s) 875, 888, 1039
AcoI YGGCCR 3 cut(s) 1041, 1056, 1101
AcsI RAATTY 4 cut(s) 206, 240, 520, 731
AcuI CTGAAG 1 cut(s) 593
AfaI GTAC 1 cut(s) 818
AfiI CCNNNNNNNGG 3 cut(s) 155, 1007, 1075
AflII CTTAAG 1 cut(s) 439
AgsI TTSAA 6 cut(s) 178, 228, 335, 665, 706, 913
AjnI CCWGG 2 cut(s) 130, 1074
AjuI GAANNNNNNNTTGG 2 cut(s) 262, 294
AluBI AGCT 7 cut(s) 28, 284, 342, 510, 536, 1121, 1169
AluI AGCT 7 cut(s) 28, 284, 342, 510, 536, 1121, 1169
Alw21I GWGCWC 2 cut(s) 660, 1171
Alw26I GTCTC 3 cut(s) 561, 689, 749
AlwI GGATC 3 cut(s) 875, 888, 1039
Ama87I CYCGRG 2 cut(s) 767, 973
AoxI GGCC 4 cut(s) 146, 1041, 1056, 1101
ApeKI GCWGC 3 cut(s) 97, 866, 928
ApoI RAATTY 4 cut(s) 206, 240, 520, 731
ArsI GACNNNNNNTTYG 4 cut(s) 1005, 1037, 1106, 1138
AspLEI GCGC 3 cut(s) 588, 1028, 1176
AspS9I GGNCC 2 cut(s) 1013, 1078
AsuHPI GGTGA 3 cut(s) 410, 616, 790
AvaI CYCGRG 2 cut(s) 767, 973
AvaII GGWCC 2 cut(s) 1013, 1078
BaeI ACNNNNGTAYC 2 cut(s) 808, 841
BalI TGGCCA 1 cut(s) 1043
BamHI GGATCC 1 cut(s) 880
BanII GRGCYC 2 cut(s) 297, 1171
Bbv12I GWGCWC 2 cut(s) 660, 1171
BbvI GCAGC 3 cut(s) 109, 878, 940
BccI CCATC 2 cut(s) 642, 918
BceAI ACGGC 1 cut(s) 1043
BcgI CGANNNNNNTGC 2 cut(s) 954, 988
BciT130I CCWGG 2 cut(s) 132, 1076
BcoDI GTCTC 3 cut(s) 561, 689, 749
BfmI CTRYAG 2 cut(s) 198, 273
BfoI RGCGCY 1 cut(s) 1177
BfrI CTTAAG 1 cut(s) 439
BisI GCNGC 3 cut(s) 98, 867, 929
BlpI GCTNAGC 1 cut(s) 1170
BlsI GCNGC 3 cut(s) 99, 868, 930
Bme1390I CCNGG 2 cut(s) 132, 1076
Bme18I GGWCC 2 cut(s) 1013, 1078
BmeT110I CYCGRG 2 cut(s) 767, 973
BmgT120I GGNCC 2 cut(s) 1013, 1078
BmiI GGNNCC 2 cut(s) 267, 882
BmrFI CCNGG 2 cut(s) 132, 1076
BmrI ACTGGG 1 cut(s) 718
BmsI GCATC 2 cut(s) 277, 974
BmuI ACTGGG 1 cut(s) 718
Bpu10I CCTNAGC 1 cut(s) 537
Bpu1102I GCTNAGC 1 cut(s) 1170
BsaJI CCNNGG 1 cut(s) 917
BsaWI WCCGGW 1 cut(s) 856
BsaXI ACNNNNNCTCC 4 cut(s) 108, 138, 686, 716
Bsc4I CCNNNNNNNGG 3 cut(s) 155, 1007, 1075
Bse1I ACTGG 4 cut(s) 252, 713, 1044, 1090
BseBI CCWGG 2 cut(s) 132, 1076
BseDI CCNNGG 1 cut(s) 917
BseGI GGATG 4 cut(s) 547, 653, 718, 1065
BseLI CCNNNNNNNGG 3 cut(s) 155, 1007, 1075
BseMII CTCAG 5 cut(s) 36, 461, 469, 551, 1184
BseNI ACTGG 4 cut(s) 252, 713, 1044, 1090
BseXI GCAGC 3 cut(s) 109, 878, 940
Bsh1236I CGCG 1 cut(s) 946
BshFI GGCC 4 cut(s) 148, 1043, 1058, 1103
BsiHKAI GWGCWC 2 cut(s) 660, 1171
BsiHKCI CYCGRG 2 cut(s) 767, 973
BsiSI CCGG 2 cut(s) 857, 1029
BslI CCNNNNNNNGG 3 cut(s) 155, 1007, 1075
BsmAI GTCTC 3 cut(s) 561, 689, 749
BsmI GAATGC 1 cut(s) 1127
BsnI GGCC 4 cut(s) 148, 1043, 1058, 1103
BsoBI CYCGRG 2 cut(s) 767, 973
Bsp1286I GDGCHC 3 cut(s) 297, 660, 1171
Bsp143I GATC 5 cut(s) 560, 637, 880, 947, 1031
Bsp1720I GCTNAGC 1 cut(s) 1170
Bsp19I CCATGG 1 cut(s) 917
BspANI GGCC 4 cut(s) 148, 1043, 1058, 1103
BspCNI CTCAG 5 cut(s) 35, 462, 468, 550, 1183
BspFNI CGCG 1 cut(s) 946
BspLI GGNNCC 2 cut(s) 267, 882
BspPI GGATC 3 cut(s) 875, 888, 1039
BspQI GCTCTTC 1 cut(s) 648
BspTI CTTAAG 1 cut(s) 439
BsrI ACTGG 4 cut(s) 252, 713, 1044, 1090
BssECI CCNNGG 1 cut(s) 917
BssMI GATC 5 cut(s) 560, 637, 880, 947, 1031
BssT1I CCWWGG 1 cut(s) 917
Bst2UI CCWGG 2 cut(s) 132, 1076
Bst4CI ACNGT 1 cut(s) 188
Bst6I CTCTTC 2 cut(s) 591, 648
BstAFI CTTAAG 1 cut(s) 439
BstC8I GCNNGC 3 cut(s) 6, 146, 944
BstDEI CTNAG 6 cut(s) 22, 455, 470, 537, 761, 1170
BstDSI CCRYGG 1 cut(s) 917
BstF5I GGATG 4 cut(s) 547, 653, 718, 1065
BstFNI CGCG 1 cut(s) 946
BstH2I RGCGCY 1 cut(s) 1177
BstHHI GCGC 3 cut(s) 588, 1028, 1176
BstKTI GATC 5 cut(s) 563, 640, 883, 950, 1034
BstMAI GTCTC 3 cut(s) 561, 689, 749
BstMBI GATC 5 cut(s) 560, 637, 880, 947, 1031
BstNI CCWGG 2 cut(s) 132, 1076
BstNSI RCATGY 1 cut(s) 406
BstSCI CCNGG 2 cut(s) 130, 1074
BstSFI CTRYAG 2 cut(s) 198, 273
BstUI CGCG 1 cut(s) 946
BstV1I GCAGC 3 cut(s) 109, 878, 940
BstX2I RGATCY 1 cut(s) 880
BstXI CCANNNNNNTGG 3 cut(s) 843, 877, 924
BstYI RGATCY 1 cut(s) 880
BsuRI GGCC 4 cut(s) 148, 1043, 1058, 1103
BtgI CCRYGG 1 cut(s) 917
BtsCI GGATG 4 cut(s) 547, 653, 718, 1065
BtsIMutI CAGTG 2 cut(s) 800, 1097
Cac8I GCNNGC 3 cut(s) 6, 146, 944
CfoI GCGC 3 cut(s) 588, 1028, 1176
Cfr13I GGNCC 2 cut(s) 1013, 1078
CsiI ACCWGGT 1 cut(s) 1074
Csp6I GTAC 1 cut(s) 817
CviAII CATG 9 cut(s) 13, 139, 211, 403, 446, 837, 871, 918, 979
CviQI GTAC 1 cut(s) 817
DdeI CTNAG 6 cut(s) 22, 455, 470, 537, 761, 1170
DpnI GATC 5 cut(s) 562, 639, 882, 949, 1033
DpnII GATC 5 cut(s) 560, 637, 880, 947, 1031
EaeI YGGCCR 3 cut(s) 1041, 1056, 1101
Eam1104I CTCTTC 2 cut(s) 591, 648
EarI CTCTTC 2 cut(s) 591, 648
Ecl136II GAGCTC 1 cut(s) 1169
Eco130I CCWWGG 1 cut(s) 917
Eco24I GRGCYC 2 cut(s) 297, 1171
Eco47I GGWCC 2 cut(s) 1013, 1078
Eco53kI GAGCTC 1 cut(s) 1169
Eco57I CTGAAG 1 cut(s) 593
Eco88I CYCGRG 2 cut(s) 767, 973
EcoICRI GAGCTC 1 cut(s) 1169
EcoRI GAATTC 3 cut(s) 206, 520, 731
EcoRII CCWGG 2 cut(s) 130, 1074
EcoT14I CCWWGG 1 cut(s) 917
EcoT22I ATGCAT 2 cut(s) 408, 876
EcoT38I GRGCYC 2 cut(s) 297, 1171
ErhI CCWWGG 1 cut(s) 917
FaeI CATG 9 cut(s) 16, 142, 214, 406, 449, 840, 874, 921, 982
FalI AAGNNNNNCTT 2 cut(s) 624, 656
FatI CATG 9 cut(s) 12, 138, 210, 402, 445, 836, 870, 917, 978
FblI GTMKAC 1 cut(s) 1140
Fnu4HI GCNGC 3 cut(s) 98, 867, 929
FokI GGATG 4 cut(s) 554, 660, 725, 1052
FriOI GRGCYC 2 cut(s) 297, 1171
Fsp4HI GCNGC 3 cut(s) 98, 867, 929
GlaI GCGC 3 cut(s) 587, 1027, 1175
GluI GCNGC 3 cut(s) 98, 867, 929
HaeII RGCGCY 1 cut(s) 1177
HaeIII GGCC 4 cut(s) 148, 1043, 1058, 1103
HapII CCGG 2 cut(s) 857, 1029
HhaI GCGC 3 cut(s) 588, 1028, 1176
Hin1II CATG 9 cut(s) 16, 142, 214, 406, 449, 840, 874, 921, 982
Hin6I GCGC 3 cut(s) 586, 1026, 1174
HinP1I GCGC 3 cut(s) 586, 1026, 1174
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HindIII AAGCTT 1 cut(s) 1119
HinfI GANTC 5 cut(s) 20, 117, 303, 364, 453
HpaII CCGG 2 cut(s) 857, 1029
HphI GGTGA 3 cut(s) 410, 616, 790
Hpy166II GTNNAC 1 cut(s) 1141
Hpy188I TCNGA 9 cut(s) 19, 25, 86, 113, 458, 573, 1036, 1149, 1166
Hpy188III TCNNGA 3 cut(s) 539, 558, 769
Hpy8I GTNNAC 1 cut(s) 1141
HpyAV CCTTC 2 cut(s) 314, 601
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4IV ACGT 2 cut(s) 624, 774
HpyCH4V TGCA 5 cut(s) 191, 290, 406, 866, 874
HpyF3I CTNAG 6 cut(s) 22, 455, 470, 537, 761, 1170
HpySE526I ACGT 2 cut(s) 624, 774
Hsp92II CATG 9 cut(s) 16, 142, 214, 406, 449, 840, 874, 921, 982
HspAI GCGC 3 cut(s) 586, 1026, 1174
Kzo9I GATC 5 cut(s) 560, 637, 880, 947, 1031
LguI GCTCTTC 1 cut(s) 648
LmnI GCTCC 3 cut(s) 214, 265, 507
Lsp1109I GCAGC 3 cut(s) 109, 878, 940
LweI GCATC 2 cut(s) 277, 974
MabI ACCWGGT 1 cut(s) 1074
MaeII ACGT 2 cut(s) 624, 774
MaeIII GTNAC 1 cut(s) 398
MalI GATC 5 cut(s) 562, 639, 882, 949, 1033
MboI GATC 5 cut(s) 560, 637, 880, 947, 1031
MboII GAAGA 9 cut(s) 35, 99, 608, 632, 644, 665, 694, 942, 945
MflI RGATCY 1 cut(s) 880
MhlI GDGCHC 3 cut(s) 297, 660, 1171
MlsI TGGCCA 1 cut(s) 1043
MluCI AATT 7 cut(s) 206, 240, 433, 520, 666, 731, 861
MluNI TGGCCA 1 cut(s) 1043
MlyI GAGTC 3 cut(s) 14, 111, 447
Mox20I TGGCCA 1 cut(s) 1043
Mph1103I ATGCAT 2 cut(s) 408, 876
MscI TGGCCA 1 cut(s) 1043
MseI TTAA 2 cut(s) 56, 440
MslI CAYNNNNRTG 2 cut(s) 841, 922
Msp20I TGGCCA 1 cut(s) 1043
MspA1I CMGCKG 1 cut(s) 284
MspCI CTTAAG 1 cut(s) 439
MspI CCGG 2 cut(s) 857, 1029
MspR9I CCNGG 2 cut(s) 132, 1076
Mva1269I GAATGC 1 cut(s) 1127
MvaI CCWGG 2 cut(s) 132, 1076
MvnI CGCG 1 cut(s) 946
NcoI CCATGG 1 cut(s) 917
NdeII GATC 5 cut(s) 560, 637, 880, 947, 1031
NlaIII CATG 9 cut(s) 16, 142, 214, 406, 449, 840, 874, 921, 982
NlaIV GGNNCC 2 cut(s) 267, 882
NmuCI GTSAC 1 cut(s) 398
NsiI ATGCAT 2 cut(s) 408, 876
NspI RCATGY 1 cut(s) 406
PaeR7I CTCGAG 1 cut(s) 973
PciSI GCTCTTC 1 cut(s) 648
PctI GAATGC 1 cut(s) 1127
PfeI GAWTC 2 cut(s) 303, 364
PflMI CCANNNNNTGG 1 cut(s) 1075
PkrI GCNGC 3 cut(s) 99, 868, 930
PleI GAGTC 3 cut(s) 14, 111, 447
PpsI GAGTC 3 cut(s) 14, 111, 447
Psp124BI GAGCTC 1 cut(s) 1171
Psp6I CCWGG 2 cut(s) 130, 1074
PspGI CCWGG 2 cut(s) 130, 1074
PspN4I GGNNCC 2 cut(s) 267, 882
PspPI GGNCC 2 cut(s) 1013, 1078
PspXI VCTCGAGB 1 cut(s) 973
PsuI RGATCY 1 cut(s) 880
PvuII CAGCTG 1 cut(s) 284
RsaI GTAC 1 cut(s) 818
RsaNI GTAC 1 cut(s) 817
RseI CAYNNNNRTG 2 cut(s) 841, 922
SacI GAGCTC 1 cut(s) 1171
SalI GTCGAC 1 cut(s) 1139
SapI GCTCTTC 1 cut(s) 648
SaqAI TTAA 2 cut(s) 56, 440
SatI GCNGC 3 cut(s) 98, 867, 929
Sau3AI GATC 5 cut(s) 560, 637, 880, 947, 1031
Sau96I GGNCC 2 cut(s) 1013, 1078
SchI GAGTC 3 cut(s) 14, 111, 447
ScrFI CCNGG 2 cut(s) 132, 1076
SduI GDGCHC 3 cut(s) 297, 660, 1171
SexAI ACCWGGT 1 cut(s) 1074
SfaNI GCATC 2 cut(s) 277, 974
SfcI CTRYAG 2 cut(s) 198, 273
Sfr274I CTCGAG 1 cut(s) 973
SinI GGWCC 2 cut(s) 1013, 1078
SlaI CTCGAG 1 cut(s) 973
SmiMI CAYNNNNRTG 2 cut(s) 841, 922
SmlI CTYRAG 2 cut(s) 439, 973
SmoI CTYRAG 2 cut(s) 439, 973
Sse9I AATT 7 cut(s) 206, 240, 433, 520, 666, 731, 861
SstI GAGCTC 1 cut(s) 1171
StyD4I CCNGG 2 cut(s) 130, 1074
StyI CCWWGG 1 cut(s) 917
TaaI ACNGT 1 cut(s) 188
TaiI ACGT 2 cut(s) 627, 777
TaqI TCGA 3 cut(s) 559, 974, 1140
TasI AATT 7 cut(s) 206, 240, 433, 520, 666, 731, 861
TfiI GAWTC 2 cut(s) 303, 364
Tru1I TTAA 2 cut(s) 56, 440
Tru9I TTAA 2 cut(s) 56, 440
TscAI CASTG 2 cut(s) 807, 1097
TseFI GTSAC 1 cut(s) 398
TseI GCWGC 3 cut(s) 97, 866, 928
Tsp45I GTSAC 1 cut(s) 398
TspDTI ATGAA 8 cut(s) 199, 295, 333, 558, 568, 945, 1054, 1177
TspRI CASTG 2 cut(s) 807, 1097
Van91I CCANNNNNTGG 1 cut(s) 1075
Vha464I CTTAAG 1 cut(s) 439
VpaK11BI GGWCC 2 cut(s) 1013, 1078
XapI RAATTY 4 cut(s) 206, 240, 520, 731
XceI RCATGY 1 cut(s) 406
XcmI CCANNNNNNNNNTGG 1 cut(s) 1051
XhoI CTCGAG 1 cut(s) 973
XmiI GTMKAC 1 cut(s) 1140
Zsp2I ATGCAT 2 cut(s) 408, 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.