MD15G1263900.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
22568169 .. 22572976
4808 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1263900.v1.1.491

Sequence Viewer

Length: 1482 bp
ATGTCTGACTCAGAGATTATTCTCTGTCTTCTTCCATCAATTGTAGCTCTCTTCCTCTTCCTCATTCTTCTCAGAAGGAAGCAGAACCAGAAAACCAGACTCAATCTCCCGCCAGGAAACATGGGTTGGCCTTTTCTTGGTGAAACCATTGGCTACTTGAAGCCCTACTCTGCAATCACCATTGGCAAATTCATGGAGGAGCATATCTCAAGGTACGGGAAAATTTACAAGTCGAATTTGTTTGGGGAGCCAACAATTGTGTCAGCAGATGCAGGGCTCAACAGATTCATATTGCAGAATGAAGGGAGATTGTTTGAATGCAGCTACCCAAGAAGCATAGGAGGGATTCTTGGGAAATGGTCCATGCTGGTTTTGGTCGGTGACATGCACAGAGACATGAGGATGATATCTCTCAACTTCTTGAGCCATGCCAGACTCAGAACCCATCTGATGAGAGAAGTTGAAAAGCACACTCTTCTTGTTTTGGGGAGTTGGAAGGAAAACTCTGTTTTTTCAGCTCAGGATGAAGCTAAGAAGTTCACGTTCAACTTGATGGCCAAACATATCATGAGCTTGGATCCTGGAAAACCAGAGACTGAGCAGCTGAAGAAATTGTATGTTACTTTCATGAAAGGTGTGGTTTCTCCTCCTCTGAATTTACCAGGAACAGCTTACAGAAGAGCCTTACAGTCAAGATCAACGATTCTGAAGTTTATAGAGTGCAAAATGAAAGAAAGATTGATGGAGGGAACCGAAAACATTGGGGAAGATGATCTGCTTGGATGGGTTCTGAAGAATTCAAATCTTTCAAAGGAGCAAATTCTTGACTTAATATTGAGCTTGCTCTTTGCTGGCCATGAAACTTCATCAGTGTCTATAGCCTTAGCAATTTACTTTTTACCAAGCTGCCCTAATGCAATTCTGCAGTTAAGGGAAGAACACAGTGAAATTGCCAAAGCCAAGAAACTGGCAGGCGAGACAGAGTTGAATTGGGAGGACTACAAGAAAATGGAGTTCACCGAATGTGTAATCTGTGAGACACTTCGGCTTGGGAATGTGGTGAGATTTTTACACAGAAAGGCTCTGAAGGATGTTCGGTACAAAGGGTATGACATTCCATCTGGGTGGAAAGTGCTTCCGGTGATTGCAGCCGTGCATTTGGATCCTTTACTTTTTGACCACCCGCAACACTTCAATCCATGGAGATGGCAGCAGAATAACAACCACCACCACCGTGGATCATCGTCGTCATCATCATGCTACACGAGCATGACAAGTCACAACTTTATGCCATTTGGGGGAGGACCACGACTTTGCGCCGGTTCAGAATTGGCCAAACTTGAAATGGCCGTGTTCATCCACCACCTTGTCCTCAACTTCCACTGGGAGTTAGCCGATCCTTTCGACAAACCTTTTGCTTTCCCCTTCGTCGATTTCCAAAATGGCCTACCAATCACAGCCCACCGCTACGTACCAAACTAA

Protein Analysis

494

Amino Acids

56.31

Weight (kDa)

8.91

Isoelectric Point (pI)

49.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 37 - 466 1.8e-56 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 110, 1184, 1465
AclWI GGATC 6 cut(s) 572, 585, 1157, 1170, 1246, 1391
AcoI YGGCCR 4 cut(s) 555, 853, 1332, 1347
AcsI RAATTY 6 cut(s) 188, 222, 235, 655, 796, 819
AcuI CTGAAG 4 cut(s) 626, 728, 812, 1106
AfaI GTAC 3 cut(s) 215, 1100, 1473
AfiI CCNNNNNNNGG 2 cut(s) 137, 1298
AgsI TTSAA 9 cut(s) 160, 317, 464, 547, 801, 810, 988, 1195, 1343
AjnI CCWGG 3 cut(s) 112, 580, 661
AjuI GAANNNNNNNTTGG 2 cut(s) 109, 141
AleI CACNNNNGTG 1 cut(s) 1233
AluBI AGCT 9 cut(s) 47, 324, 518, 530, 573, 604, 671, 840, 906
AluI AGCT 9 cut(s) 47, 324, 518, 530, 573, 604, 671, 840, 906
Alw26I GTCTC 4 cut(s) 387, 587, 971, 1031
AlwI GGATC 6 cut(s) 572, 585, 1157, 1170, 1246, 1391
AlwNI CAGNNNCTG 1 cut(s) 596
AoxI GGCC 6 cut(s) 128, 555, 853, 1332, 1347, 1444
ApeKI GCWGC 5 cut(s) 321, 601, 906, 1148, 1210
ApoI RAATTY 6 cut(s) 188, 222, 235, 655, 796, 819
ArsI GACNNNNNNTTYG 4 cut(s) 1296, 1328, 1397, 1429
AspLEI GCGC 1 cut(s) 1319
AspS9I GGNCC 2 cut(s) 360, 1304
AsuHPI GGTGA 6 cut(s) 152, 169, 392, 1009, 1072, 1153
AvaII GGWCC 2 cut(s) 360, 1304
BalI TGGCCA 3 cut(s) 557, 855, 1334
BamHI GGATCC 2 cut(s) 577, 1162
BanII GRGCYC 1 cut(s) 279
BauI CACGAG 1 cut(s) 1264
BbsI GAAGAC 1 cut(s) 20
BbvI GCAGC 5 cut(s) 333, 613, 893, 1160, 1222
BccI CCATC 7 cut(s) 43, 453, 547, 736, 777, 1126, 1200
BceAI ACGGC 2 cut(s) 1136, 1334
BciT130I CCWGG 3 cut(s) 114, 582, 663
BcoDI GTCTC 4 cut(s) 387, 587, 971, 1031
BfmI CTRYAG 2 cut(s) 876, 923
BisI GCNGC 5 cut(s) 322, 602, 907, 1149, 1211
BlsI GCNGC 5 cut(s) 323, 603, 908, 1150, 1212
Bme1390I CCNGG 3 cut(s) 114, 582, 663
Bme18I GGWCC 2 cut(s) 360, 1304
BmgT120I GGNCC 2 cut(s) 360, 1304
BmiI GGNNCC 4 cut(s) 249, 579, 751, 1164
BmrFI CCNGG 3 cut(s) 114, 582, 663
BmrI ACTGGG 1 cut(s) 1393
BmsI GCATC 1 cut(s) 259
BmuI ACTGGG 1 cut(s) 1393
BpiI GAAGAC 1 cut(s) 20
BplI GAGNNNNNCTC 2 cut(s) 191, 223
Bpu10I CCTNAGC 2 cut(s) 519, 883
BpuEI CTTGAG 2 cut(s) 193, 442
BsaAI YACGTR 1 cut(s) 1471
BsaJI CCNNGG 2 cut(s) 1199, 1234
BsaWI WCCGGW 1 cut(s) 1138
BsaXI ACNNNNNCTCC 2 cut(s) 90, 120
Bsc4I CCNNNNNNNGG 2 cut(s) 137, 1298
Bse118I RCCGGY 1 cut(s) 1319
Bse1I ACTGG 2 cut(s) 972, 1388
BseBI CCWGG 3 cut(s) 114, 582, 663
BseDI CCNNGG 2 cut(s) 1199, 1234
BseGI GGATG 5 cut(s) 408, 529, 788, 1096, 1356
BseLI CCNNNNNNNGG 2 cut(s) 137, 1298
BseMII CTCAG 5 cut(s) 24, 85, 451, 533, 588
BseNI ACTGG 2 cut(s) 972, 1388
BseRI GAGGAG 3 cut(s) 212, 636, 639
BseXI GCAGC 5 cut(s) 333, 613, 893, 1160, 1222
BshFI GGCC 6 cut(s) 130, 557, 855, 1334, 1349, 1446
BsiSI CCGG 2 cut(s) 1139, 1320
BslI CCNNNNNNNGG 2 cut(s) 137, 1298
BsmAI GTCTC 4 cut(s) 387, 587, 971, 1031
BsmI GAATGC 1 cut(s) 323
BsnI GGCC 6 cut(s) 130, 557, 855, 1334, 1349, 1446
Bsp1286I GDGCHC 1 cut(s) 279
Bsp143I GATC 6 cut(s) 577, 695, 772, 1162, 1238, 1396
Bsp19I CCATGG 1 cut(s) 1199
BspACI CCGC 3 cut(s) 110, 1184, 1465
BspANI GGCC 6 cut(s) 130, 557, 855, 1334, 1349, 1446
BspCNI CTCAG 5 cut(s) 23, 84, 450, 532, 589
BspHI TCATGA 2 cut(s) 567, 627
BspLI GGNNCC 4 cut(s) 249, 579, 751, 1164
BspMAI CTGCAG 1 cut(s) 927
BspPI GGATC 6 cut(s) 572, 585, 1157, 1170, 1246, 1391
BspQI GCTCTTC 1 cut(s) 673
BsrFI RCCGGY 1 cut(s) 1319
BsrI ACTGG 2 cut(s) 972, 1388
BssAI RCCGGY 1 cut(s) 1319
BssECI CCNNGG 2 cut(s) 1199, 1234
BssMI GATC 6 cut(s) 577, 695, 772, 1162, 1238, 1396
BssSI CACGAG 1 cut(s) 1264
BssT1I CCWWGG 1 cut(s) 1199
Bst2BI CACGAG 1 cut(s) 1264
Bst2UI CCWGG 3 cut(s) 114, 582, 663
Bst4CI ACNGT 3 cut(s) 690, 944, 1235
Bst6I CTCTTC 4 cut(s) 56, 62, 480, 673
BstBAI YACGTR 1 cut(s) 1471
BstC8I GCNNGC 3 cut(s) 842, 853, 973
BstDEI CTNAG 7 cut(s) 10, 71, 437, 519, 531, 597, 883
BstDSI CCRYGG 2 cut(s) 1199, 1234
BstF5I GGATG 5 cut(s) 408, 529, 788, 1096, 1356
BstHHI GCGC 1 cut(s) 1319
BstKTI GATC 6 cut(s) 580, 698, 775, 1165, 1241, 1399
BstMAI GTCTC 4 cut(s) 387, 587, 971, 1031
BstMBI GATC 6 cut(s) 577, 695, 772, 1162, 1238, 1396
BstMWI GCNNNNNNNGC 1 cut(s) 1266
BstNI CCWGG 3 cut(s) 114, 582, 663
BstNSI RCATGY 1 cut(s) 388
BstSCI CCNGG 3 cut(s) 112, 580, 661
BstSFI CTRYAG 2 cut(s) 876, 923
BstSNI TACGTA 1 cut(s) 1471
BstV1I GCAGC 5 cut(s) 333, 613, 893, 1160, 1222
BstV2I GAAGAC 1 cut(s) 20
BstX2I RGATCY 2 cut(s) 577, 1162
BstXI CCANNNNNNTGG 4 cut(s) 967, 1125, 1206, 1235
BstYI RGATCY 2 cut(s) 577, 1162
BsuRI GGCC 6 cut(s) 130, 557, 855, 1334, 1349, 1446
BtgI CCRYGG 2 cut(s) 1199, 1234
BtsCI GGATG 5 cut(s) 408, 529, 788, 1096, 1356
BtsIMutI CAGTG 3 cut(s) 876, 949, 1381
Cac8I GCNNGC 3 cut(s) 842, 853, 973
CaiI CAGNNNCTG 1 cut(s) 596
CciI TCATGA 2 cut(s) 567, 627
CfoI GCGC 1 cut(s) 1319
Cfr10I RCCGGY 1 cut(s) 1319
Cfr13I GGNCC 2 cut(s) 360, 1304
Csp6I GTAC 3 cut(s) 214, 1099, 1472
CviQI GTAC 3 cut(s) 214, 1099, 1472
DdeI CTNAG 7 cut(s) 10, 71, 437, 519, 531, 597, 883
DpnI GATC 6 cut(s) 579, 697, 774, 1164, 1240, 1398
DpnII GATC 6 cut(s) 577, 695, 772, 1162, 1238, 1396
EaeI YGGCCR 4 cut(s) 555, 853, 1332, 1347
Eam1104I CTCTTC 4 cut(s) 56, 62, 480, 673
EarI CTCTTC 4 cut(s) 56, 62, 480, 673
Eco105I TACGTA 1 cut(s) 1471
Eco130I CCWWGG 1 cut(s) 1199
Eco24I GRGCYC 1 cut(s) 279
Eco32I GATATC 1 cut(s) 408
Eco47I GGWCC 2 cut(s) 360, 1304
Eco57I CTGAAG 4 cut(s) 626, 728, 812, 1106
EcoRI GAATTC 1 cut(s) 796
EcoRII CCWGG 3 cut(s) 112, 580, 661
EcoRV GATATC 1 cut(s) 408
EcoT14I CCWWGG 1 cut(s) 1199
EcoT38I GRGCYC 1 cut(s) 279
ErhI CCWWGG 1 cut(s) 1199
FauI CCCGC 2 cut(s) 117, 1191
Fnu4HI GCNGC 5 cut(s) 322, 602, 907, 1149, 1211
FokI GGATG 5 cut(s) 415, 536, 795, 1103, 1343
FriOI GRGCYC 1 cut(s) 279
Fsp4HI GCNGC 5 cut(s) 322, 602, 907, 1149, 1211
GlaI GCGC 1 cut(s) 1318
GluI GCNGC 5 cut(s) 322, 602, 907, 1149, 1211
HaeIII GGCC 6 cut(s) 130, 557, 855, 1334, 1349, 1446
HapII CCGG 2 cut(s) 1139, 1320
HhaI GCGC 1 cut(s) 1319
Hin6I GCGC 1 cut(s) 1317
HinP1I GCGC 1 cut(s) 1317
HinfI GANTC 6 cut(s) 8, 99, 285, 346, 435, 703
HpaII CCGG 2 cut(s) 1139, 1320
HphI GGTGA 6 cut(s) 152, 169, 392, 1009, 1072, 1153
Hpy166II GTNNAC 2 cut(s) 540, 1017
Hpy188III TCNNGA 6 cut(s) 421, 521, 568, 628, 693, 824
Hpy8I GTNNAC 2 cut(s) 540, 1017
Hpy99I CGWCG 2 cut(s) 1249, 1433
HpyAV CCTTC 5 cut(s) 69, 296, 490, 1081, 1435
HpyCH4III ACNGT 3 cut(s) 690, 944, 1235
HpyCH4IV ACGT 2 cut(s) 542, 1470
HpyF10VI GCNNNNNNNGC 1 cut(s) 1266
HpyF3I CTNAG 7 cut(s) 10, 71, 437, 519, 531, 597, 883
HpySE526I ACGT 2 cut(s) 542, 1470
HspAI GCGC 1 cut(s) 1317
Kzo9I GATC 6 cut(s) 577, 695, 772, 1162, 1238, 1396
LguI GCTCTTC 1 cut(s) 673
LmnI GCTCC 3 cut(s) 199, 247, 814
Lsp1109I GCAGC 5 cut(s) 333, 613, 893, 1160, 1222
LweI GCATC 1 cut(s) 259
MaeII ACGT 2 cut(s) 542, 1470
MaeIII GTNAC 3 cut(s) 380, 619, 1277
MalI GATC 6 cut(s) 579, 697, 774, 1164, 1240, 1398
MboI GATC 6 cut(s) 577, 695, 772, 1162, 1238, 1396
MfeI CAATTG 2 cut(s) 39, 255
MflI RGATCY 2 cut(s) 577, 1162
MhlI GDGCHC 1 cut(s) 279
MlsI TGGCCA 3 cut(s) 557, 855, 1334
MluNI TGGCCA 3 cut(s) 557, 855, 1334
MlyI GAGTC 3 cut(s) 2, 93, 429
MmeI TCCRAC 1 cut(s) 473
Mox20I TGGCCA 3 cut(s) 557, 855, 1334
MscI TGGCCA 3 cut(s) 557, 855, 1334
MseI TTAA 2 cut(s) 830, 929
MslI CAYNNNNRTG 6 cut(s) 401, 1123, 1204, 1233, 1255, 1268
Msp20I TGGCCA 3 cut(s) 557, 855, 1334
MspA1I CMGCKG 1 cut(s) 604
MspI CCGG 2 cut(s) 1139, 1320
MspR9I CCNGG 3 cut(s) 114, 582, 663
MunI CAATTG 2 cut(s) 39, 255
Mva1269I GAATGC 1 cut(s) 323
MvaI CCWGG 3 cut(s) 114, 582, 663
MwoI GCNNNNNNNGC 1 cut(s) 1266
NcoI CCATGG 1 cut(s) 1199
NdeII GATC 6 cut(s) 577, 695, 772, 1162, 1238, 1396
NlaIV GGNNCC 4 cut(s) 249, 579, 751, 1164
NmuCI GTSAC 2 cut(s) 380, 1277
NspI RCATGY 1 cut(s) 388
OliI CACNNNNGTG 1 cut(s) 1233
PagI TCATGA 2 cut(s) 567, 627
PciSI GCTCTTC 1 cut(s) 673
PctI GAATGC 1 cut(s) 323
PfeI GAWTC 3 cut(s) 285, 346, 703
PfoI TCCNGGA 1 cut(s) 580
PkrI GCNGC 5 cut(s) 323, 603, 908, 1150, 1212
PleI GAGTC 3 cut(s) 2, 93, 429
PpsI GAGTC 3 cut(s) 2, 93, 429
Ppu21I YACGTR 1 cut(s) 1471
Psp6I CCWGG 3 cut(s) 112, 580, 661
PspGI CCWGG 3 cut(s) 112, 580, 661
PspN4I GGNNCC 4 cut(s) 249, 579, 751, 1164
PspPI GGNCC 2 cut(s) 360, 1304
PstI CTGCAG 1 cut(s) 927
PstNI CAGNNNCTG 1 cut(s) 596
PsuI RGATCY 2 cut(s) 577, 1162
PvuII CAGCTG 1 cut(s) 604
RsaI GTAC 3 cut(s) 215, 1100, 1473
RsaNI GTAC 3 cut(s) 214, 1099, 1472
RseI CAYNNNNRTG 6 cut(s) 401, 1123, 1204, 1233, 1255, 1268
SapI GCTCTTC 1 cut(s) 673
SaqAI TTAA 2 cut(s) 830, 929
SatI GCNGC 5 cut(s) 322, 602, 907, 1149, 1211
Sau3AI GATC 6 cut(s) 577, 695, 772, 1162, 1238, 1396
Sau96I GGNCC 2 cut(s) 360, 1304
SchI GAGTC 3 cut(s) 2, 93, 429
ScrFI CCNGG 3 cut(s) 114, 582, 663
SduI GDGCHC 1 cut(s) 279
SfaNI GCATC 1 cut(s) 259
SfcI CTRYAG 2 cut(s) 876, 923
SinI GGWCC 2 cut(s) 360, 1304
SmiMI CAYNNNNRTG 6 cut(s) 401, 1123, 1204, 1233, 1255, 1268
SmlI CTYRAG 2 cut(s) 208, 421
SmoI CTYRAG 2 cut(s) 208, 421
SnaBI TACGTA 1 cut(s) 1471
SsiI CCGC 3 cut(s) 110, 1184, 1465
SspI AATATT 1 cut(s) 834
StyD4I CCNGG 3 cut(s) 112, 580, 661
StyI CCWWGG 1 cut(s) 1199
TaaI ACNGT 3 cut(s) 690, 944, 1235
TaiI ACGT 2 cut(s) 545, 1473
TaqI TCGA 3 cut(s) 233, 1404, 1431
TfiI GAWTC 3 cut(s) 285, 346, 703
Tru1I TTAA 2 cut(s) 830, 929
Tru9I TTAA 2 cut(s) 830, 929
TscAI CASTG 3 cut(s) 876, 949, 1388
TseFI GTSAC 2 cut(s) 380, 1277
TseI GCWGC 5 cut(s) 321, 601, 906, 1148, 1210
Tsp45I GTSAC 2 cut(s) 380, 1277
TspRI CASTG 3 cut(s) 876, 949, 1388
VpaK11BI GGWCC 2 cut(s) 360, 1304
XapI RAATTY 6 cut(s) 188, 222, 235, 655, 796, 819
XceI RCATGY 1 cut(s) 388
XcmI CCANNNNNNNNNTGG 3 cut(s) 370, 1232, 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.