FvH4_1g13420

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
7360656 .. 7366183
5528 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g13420.t4

Sequence Viewer

Length: 1494 bp
ATGCCAACCTCCATGCCTGACTCAGAGCTCATCCTCTGTGCTCTTCCCTCAATCCTAGCTCTGTTCCTCTTCCTCATTCTCATCACGAGAAAGAAGCAGCAGTACCAAATCAGAGGACTCAATCTCCCACCAGGAAACATGGGGTGGCCTTTTCTTGGAGAAACCATAGGCTACTTGAAGCCTTACTGTGCAACCTCTATAGGAGAATTCATGGAGCAACATATTTCAAGGTATGGGAAAATTTACAAGTCCAGTTTGTTTGGGGAGCCAACTATAGTTTCAGCTGATGCAGGGCTGAATAGATTCATACTACAAAATGAAGGCAGATTGTTTGAATGTAGCTACCCAAGAAGCATAGGAGGGATTCTTGGAAAATGGTCTATGCTGGTTTTGGTCGGTGACATGCATAGAGATATGAGGACTATATCCCTCAACTTCTTAAGCCATGCCAGACTCAGAACCCATTTGCTGAGAGAAGTTGAGAAGCATACTTTGCTTGTTTTGGGGAGCTGGAAAGAGAATTCTGTATTTTCAGCTCAGGATGAAGCTAAGAAGTTCACTTTCAATTTGATGGCAAAACACATCATGAGCTTGGATCCTGGAGAACCAGAAACAGAGCAGCTCAAGAAATTGTATGTAACTTTCATGAAGGGTGTGGTTTCTGCTCCATTGAATTTACCAGGAACAGCTTACAGAAAAGCCTTGCAGTCTCGATCAACCATTCTGAAGTTCATTGAGCGCAAAATGGAAGAAAGGTTGAAGGAGGGAAGTGAAAACATAGGAGAAGATGATCTTCTTGGGTGGGTTTTGAAGCATTCAAATCTTTCAAAGGAGCAAATTCTTGACTTGATATTGAGCTTGCTCTTTGCTGGTCATGAAACTTCATCAGTCTCCATAGCTTTAGCCATCTACTTCTTGCCTGGCTGTCGTAATGCAATTGAACACTTGAGGGAAGAGCACATTGAAATTGTCAAAGCCAAGAAGATAGCAGGAGAGACAGAGTTGAACTGGGACGACTACAAGAAAATGGAATTCACTCAATGTGTTATTAGTGAGACACTGAGGCTCGGAAACGTGGTGAGGTTTTTACACAGAAAGGCACTAAAAGATGTAAGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTGCTTCCGGTGATTGCAGCCGTGCATTTGGATCCTTTGCTTTTTGACCACCCTCAACACTTCAATCCATGGAGATGGCAGCAGAGCAACAGCGCGCGATCTTCTTCATCATCAAAATCTTATTCGAGCATGACAAGTAGCAACTTTATGCCATTTGGGGGAGGACCACGGCTTTGCGCCGGATCAGAATTGGCCAAGCTAGAAATGGCTGTGTTCATCCACCACCTGGTCCTCAACTACCAGTGGGACTTGGCCAATTTGGATGACCAAGCTTTCGCATTCCCTTTTGTTGACTTCCAGAAAGGACTACAGATCAGAGCTCGACGCCAAACAAACTTCATGTAA

Protein Analysis

498

Amino Acids

56.64

Weight (kDa)

8.95

Isoelectric Point (pI)

47.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 283 2.6e-52 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1375
AccII CGCG 2 cut(s) 1244, 1246
AclWI GGATC 5 cut(s) 590, 603, 1175, 1188, 1339
AcoI YGGCCR 2 cut(s) 1341, 1401
AcsI RAATTY 6 cut(s) 206, 240, 520, 673, 837, 1031
AcuI CTGAAG 1 cut(s) 746
AcyI GRCGYC 1 cut(s) 1474
AfaI GTAC 2 cut(s) 104, 1118
AfiI CCNNNNNNNGG 3 cut(s) 155, 1307, 1375
AflII CTTAAG 1 cut(s) 439
AjnI CCWGG 5 cut(s) 130, 598, 679, 919, 1374
AjuI GAANNNNNNNTTGG 2 cut(s) 262, 294
Alw21I GWGCWC 4 cut(s) 30, 43, 960, 1471
Alw26I GTCTC 4 cut(s) 714, 895, 989, 1049
AlwI GGATC 5 cut(s) 590, 603, 1175, 1188, 1339
AoxI GGCC 3 cut(s) 146, 1341, 1401
ApeKI GCWGC 4 cut(s) 97, 619, 1166, 1228
ApoI RAATTY 6 cut(s) 206, 240, 520, 673, 837, 1031
ArsI GACNNNNNNTTYG 4 cut(s) 1305, 1337, 1406, 1438
Asp700I GAANNNNTTC 1 cut(s) 302
AspLEI GCGC 4 cut(s) 741, 1244, 1246, 1328
AspS9I GGNCC 2 cut(s) 1313, 1378
AsuHPI GGTGA 3 cut(s) 410, 1090, 1171
AvaII GGWCC 2 cut(s) 1313, 1378
BaeI ACNNNNGTAYC 2 cut(s) 1108, 1141
BalI TGGCCA 2 cut(s) 1343, 1403
BamHI GGATCC 2 cut(s) 595, 1180
BanII GRGCYC 2 cut(s) 30, 1471
BarI GAAGNNNNNNTAC 2 cut(s) 86, 118
BauI CACGAG 1 cut(s) 85
Bbv12I GWGCWC 4 cut(s) 30, 43, 960, 1471
BbvI GCAGC 4 cut(s) 109, 631, 1178, 1240
BccI CCATC 3 cut(s) 565, 914, 1218
BceAI ACGGC 2 cut(s) 1154, 1334
BciT130I CCWGG 5 cut(s) 132, 600, 681, 921, 1376
BcoDI GTCTC 4 cut(s) 714, 895, 989, 1049
BfaI CTAG 2 cut(s) 56, 1349
BfmI CTRYAG 3 cut(s) 198, 273, 1457
BfrI CTTAAG 1 cut(s) 439
BisI GCNGC 4 cut(s) 98, 620, 1167, 1229
BlsI GCNGC 4 cut(s) 99, 621, 1168, 1230
Bme1390I CCNGG 5 cut(s) 132, 600, 681, 921, 1376
Bme18I GGWCC 2 cut(s) 1313, 1378
BmgT120I GGNCC 2 cut(s) 1313, 1378
BmiI GGNNCC 3 cut(s) 267, 597, 1182
BmrFI CCNGG 5 cut(s) 132, 600, 681, 921, 1376
BmrI ACTGGG 1 cut(s) 1018
BmsI GCATC 1 cut(s) 277
BmuI ACTGGG 1 cut(s) 1018
BpmI CTGGAG 1 cut(s) 621
Bpu10I CCTNAGC 1 cut(s) 537
BpuEI CTTGAG 2 cut(s) 608, 967
BsaHI GRCGYC 1 cut(s) 1474
BsaJI CCNNGG 2 cut(s) 1217, 1316
BsaWI WCCGGW 1 cut(s) 1156
BsaXI ACNNNNNCTCC 2 cut(s) 108, 138
Bsc4I CCNNNNNNNGG 3 cut(s) 155, 1307, 1375
Bse1I ACTGG 3 cut(s) 252, 1013, 1390
BseBI CCWGG 5 cut(s) 132, 600, 681, 921, 1376
BseDI CCNNGG 2 cut(s) 1217, 1316
BseGI GGATG 4 cut(s) 30, 547, 1365, 1417
BseLI CCNNNNNNNGG 3 cut(s) 155, 1307, 1375
BseMII CTCAG 5 cut(s) 36, 461, 469, 551, 1052
BseNI ACTGG 3 cut(s) 252, 1013, 1390
BsePI GCGCGC 1 cut(s) 1242
BseXI GCAGC 4 cut(s) 109, 631, 1178, 1240
Bsh1236I CGCG 2 cut(s) 1244, 1246
BshFI GGCC 3 cut(s) 148, 1343, 1403
BsiHKAI GWGCWC 4 cut(s) 30, 43, 960, 1471
BsiSI CCGG 2 cut(s) 1157, 1329
BslFI GGGAC 2 cut(s) 1025, 1409
BslI CCNNNNNNNGG 3 cut(s) 155, 1307, 1375
BsmAI GTCTC 4 cut(s) 714, 895, 989, 1049
BsmFI GGGAC 2 cut(s) 1025, 1409
BsmI GAATGC 2 cut(s) 814, 1427
BsnI GGCC 3 cut(s) 148, 1343, 1403
Bsp1286I GDGCHC 4 cut(s) 30, 43, 960, 1471
Bsp143I GATC 7 cut(s) 595, 713, 790, 1180, 1247, 1331, 1461
Bsp19I CCATGG 1 cut(s) 1217
BspANI GGCC 3 cut(s) 148, 1343, 1403
BspCNI CTCAG 5 cut(s) 35, 462, 468, 550, 1053
BspFNI CGCG 2 cut(s) 1244, 1246
BspHI TCATGA 3 cut(s) 585, 645, 874
BspLI GGNNCC 3 cut(s) 267, 597, 1182
BspPI GGATC 5 cut(s) 590, 603, 1175, 1188, 1339
BspQI GCTCTTC 2 cut(s) 48, 948
BspTI CTTAAG 1 cut(s) 439
BsrI ACTGG 3 cut(s) 252, 1013, 1390
BssECI CCNNGG 2 cut(s) 1217, 1316
BssHII GCGCGC 1 cut(s) 1242
BssMI GATC 7 cut(s) 595, 713, 790, 1180, 1247, 1331, 1461
BssNI GRCGYC 1 cut(s) 1474
BssSI CACGAG 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 1217
Bst2BI CACGAG 1 cut(s) 85
Bst2UI CCWGG 5 cut(s) 132, 600, 681, 921, 1376
Bst4CI ACNGT 1 cut(s) 188
Bst6I CTCTTC 3 cut(s) 48, 74, 948
BstACI GRCGYC 1 cut(s) 1474
BstAFI CTTAAG 1 cut(s) 439
BstAPI GCANNNNNTGC 1 cut(s) 493
BstC8I GCNNGC 2 cut(s) 860, 1244
BstDEI CTNAG 6 cut(s) 22, 455, 470, 537, 549, 1061
BstDSI CCRYGG 2 cut(s) 1217, 1316
BstF5I GGATG 4 cut(s) 30, 547, 1365, 1417
BstFNI CGCG 2 cut(s) 1244, 1246
BstHHI GCGC 4 cut(s) 741, 1244, 1246, 1328
BstKTI GATC 7 cut(s) 598, 716, 793, 1183, 1250, 1334, 1464
BstMAI GTCTC 4 cut(s) 714, 895, 989, 1049
BstMBI GATC 7 cut(s) 595, 713, 790, 1180, 1247, 1331, 1461
BstMWI GCNNNNNNNGC 1 cut(s) 493
BstNI CCWGG 5 cut(s) 132, 600, 681, 921, 1376
BstNSI RCATGY 1 cut(s) 406
BstSCI CCNGG 5 cut(s) 130, 598, 679, 919, 1374
BstSFI CTRYAG 3 cut(s) 198, 273, 1457
BstUI CGCG 2 cut(s) 1244, 1246
BstV1I GCAGC 4 cut(s) 109, 631, 1178, 1240
BstX2I RGATCY 2 cut(s) 595, 1180
BstXI CCANNNNNNTGG 2 cut(s) 1143, 1224
BstYI RGATCY 2 cut(s) 595, 1180
BsuRI GGCC 3 cut(s) 148, 1343, 1403
BtgI CCRYGG 2 cut(s) 1217, 1316
BtsCI GGATG 4 cut(s) 30, 547, 1365, 1417
BtsIMutI CAGTG 2 cut(s) 1058, 1397
Cac8I GCNNGC 2 cut(s) 860, 1244
CciI TCATGA 3 cut(s) 585, 645, 874
CfoI GCGC 4 cut(s) 741, 1244, 1246, 1328
Cfr13I GGNCC 2 cut(s) 1313, 1378
CseI GACGC 1 cut(s) 1482
CsiI ACCWGGT 1 cut(s) 1374
Csp6I GTAC 2 cut(s) 103, 1117
CviQI GTAC 2 cut(s) 103, 1117
DdeI CTNAG 6 cut(s) 22, 455, 470, 537, 549, 1061
DpnI GATC 7 cut(s) 597, 715, 792, 1182, 1249, 1333, 1463
DpnII GATC 7 cut(s) 595, 713, 790, 1180, 1247, 1331, 1461
EaeI YGGCCR 2 cut(s) 1341, 1401
Eam1104I CTCTTC 3 cut(s) 48, 74, 948
EarI CTCTTC 3 cut(s) 48, 74, 948
Ecl136II GAGCTC 2 cut(s) 28, 1469
Eco130I CCWWGG 1 cut(s) 1217
Eco24I GRGCYC 2 cut(s) 30, 1471
Eco47I GGWCC 2 cut(s) 1313, 1378
Eco53kI GAGCTC 2 cut(s) 28, 1469
Eco57I CTGAAG 1 cut(s) 746
EcoICRI GAGCTC 2 cut(s) 28, 1469
EcoRI GAATTC 3 cut(s) 206, 520, 1031
EcoRII CCWGG 5 cut(s) 130, 598, 679, 919, 1374
EcoT14I CCWWGG 1 cut(s) 1217
EcoT22I ATGCAT 1 cut(s) 408
EcoT38I GRGCYC 2 cut(s) 30, 1471
ErhI CCWWGG 1 cut(s) 1217
FalI AAGNNNNNCTT 2 cut(s) 777, 809
FaqI GGGAC 2 cut(s) 1025, 1409
Fnu4HI GCNGC 4 cut(s) 98, 620, 1167, 1229
FokI GGATG 4 cut(s) 17, 554, 1352, 1424
FriOI GRGCYC 2 cut(s) 30, 1471
Fsp4HI GCNGC 4 cut(s) 98, 620, 1167, 1229
FspBI CTAG 2 cut(s) 56, 1349
GlaI GCGC 4 cut(s) 740, 1243, 1245, 1327
GluI GCNGC 4 cut(s) 98, 620, 1167, 1229
GsuI CTGGAG 1 cut(s) 621
HaeIII GGCC 3 cut(s) 148, 1343, 1403
HapII CCGG 2 cut(s) 1157, 1329
HgaI GACGC 1 cut(s) 1482
HhaI GCGC 4 cut(s) 741, 1244, 1246, 1328
Hin1I GRCGYC 1 cut(s) 1474
Hin6I GCGC 4 cut(s) 739, 1242, 1244, 1326
HinP1I GCGC 4 cut(s) 739, 1242, 1244, 1326
HincII GTYRAC 1 cut(s) 1441
HindII GTYRAC 1 cut(s) 1441
HindIII AAGCTT 1 cut(s) 1419
HinfI GANTC 5 cut(s) 20, 117, 303, 364, 453
HpaII CCGG 2 cut(s) 1157, 1329
HphI GGTGA 3 cut(s) 410, 1090, 1171
Hpy166II GTNNAC 2 cut(s) 558, 1441
Hpy188I TCNGA 7 cut(s) 25, 113, 458, 726, 1070, 1336, 1466
Hpy188III TCNNGA 9 cut(s) 85, 539, 586, 625, 646, 711, 842, 875, 1447
Hpy8I GTNNAC 2 cut(s) 558, 1441
Hpy99I CGWCG 1 cut(s) 1476
HpyAV CCTTC 3 cut(s) 314, 643, 754
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4IV ACGT 1 cut(s) 1074
HpyCH4V TGCA 7 cut(s) 191, 290, 406, 706, 935, 1166, 1174
HpyF10VI GCNNNNNNNGC 1 cut(s) 493
HpyF3I CTNAG 6 cut(s) 22, 455, 470, 537, 549, 1061
HpySE526I ACGT 1 cut(s) 1074
Hsp92I GRCGYC 1 cut(s) 1474
HspAI GCGC 4 cut(s) 739, 1242, 1244, 1326
Kzo9I GATC 7 cut(s) 595, 713, 790, 1180, 1247, 1331, 1461
LguI GCTCTTC 2 cut(s) 48, 948
LmnI GCTCC 5 cut(s) 214, 265, 507, 670, 832
Lsp1109I GCAGC 4 cut(s) 109, 631, 1178, 1240
LweI GCATC 1 cut(s) 277
MabI ACCWGGT 1 cut(s) 1374
MaeI CTAG 2 cut(s) 56, 1349
MaeII ACGT 1 cut(s) 1074
MaeIII GTNAC 2 cut(s) 398, 637
MalI GATC 7 cut(s) 597, 715, 792, 1182, 1249, 1333, 1463
MboI GATC 7 cut(s) 595, 713, 790, 1180, 1247, 1331, 1461
MboII GAAGA 9 cut(s) 35, 61, 761, 785, 797, 965, 994, 1242, 1245
MfeI CAATTG 1 cut(s) 936
MflI RGATCY 2 cut(s) 595, 1180
MhlI GDGCHC 4 cut(s) 30, 43, 960, 1471
MlsI TGGCCA 2 cut(s) 1343, 1403
MluNI TGGCCA 2 cut(s) 1343, 1403
MlyI GAGTC 3 cut(s) 14, 111, 447
Mox20I TGGCCA 2 cut(s) 1343, 1403
Mph1103I ATGCAT 1 cut(s) 408
MroXI GAANNNNTTC 1 cut(s) 302
MscI TGGCCA 2 cut(s) 1343, 1403
MseI TTAA 1 cut(s) 440
MslI CAYNNNNRTG 2 cut(s) 1141, 1222
Msp20I TGGCCA 2 cut(s) 1343, 1403
MspA1I CMGCKG 1 cut(s) 284
MspCI CTTAAG 1 cut(s) 439
MspI CCGG 2 cut(s) 1157, 1329
MspR9I CCNGG 5 cut(s) 132, 600, 681, 921, 1376
MunI CAATTG 1 cut(s) 936
Mva1269I GAATGC 2 cut(s) 814, 1427
MvaI CCWGG 5 cut(s) 132, 600, 681, 921, 1376
MvnI CGCG 2 cut(s) 1244, 1246
MwoI GCNNNNNNNGC 1 cut(s) 493
NcoI CCATGG 1 cut(s) 1217
NdeII GATC 7 cut(s) 595, 713, 790, 1180, 1247, 1331, 1461
NlaIV GGNNCC 3 cut(s) 267, 597, 1182
NmuCI GTSAC 1 cut(s) 398
NsiI ATGCAT 1 cut(s) 408
NspI RCATGY 1 cut(s) 406
PagI TCATGA 3 cut(s) 585, 645, 874
PauI GCGCGC 1 cut(s) 1242
PciSI GCTCTTC 2 cut(s) 48, 948
PctI GAATGC 2 cut(s) 814, 1427
PdmI GAANNNNTTC 1 cut(s) 302
PfeI GAWTC 2 cut(s) 303, 364
PflMI CCANNNNNTGG 1 cut(s) 1375
PfoI TCCNGGA 1 cut(s) 598
PkrI GCNGC 4 cut(s) 99, 621, 1168, 1230
PleI GAGTC 3 cut(s) 14, 111, 447
PpsI GAGTC 3 cut(s) 14, 111, 447
Psp124BI GAGCTC 2 cut(s) 30, 1471
Psp6I CCWGG 5 cut(s) 130, 598, 679, 919, 1374
PspGI CCWGG 5 cut(s) 130, 598, 679, 919, 1374
PspN4I GGNNCC 3 cut(s) 267, 597, 1182
PspPI GGNCC 2 cut(s) 1313, 1378
PsuI RGATCY 2 cut(s) 595, 1180
PteI GCGCGC 1 cut(s) 1242
PvuII CAGCTG 1 cut(s) 284
RsaI GTAC 2 cut(s) 104, 1118
RsaNI GTAC 2 cut(s) 103, 1117
RseI CAYNNNNRTG 2 cut(s) 1141, 1222
SacI GAGCTC 2 cut(s) 30, 1471
SapI GCTCTTC 2 cut(s) 48, 948
SaqAI TTAA 1 cut(s) 440
SatI GCNGC 4 cut(s) 98, 620, 1167, 1229
Sau3AI GATC 7 cut(s) 595, 713, 790, 1180, 1247, 1331, 1461
Sau96I GGNCC 2 cut(s) 1313, 1378
SchI GAGTC 3 cut(s) 14, 111, 447
ScrFI CCNGG 5 cut(s) 132, 600, 681, 921, 1376
SduI GDGCHC 4 cut(s) 30, 43, 960, 1471
SexAI ACCWGGT 1 cut(s) 1374
SfaNI GCATC 1 cut(s) 277
SfcI CTRYAG 3 cut(s) 198, 273, 1457
SinI GGWCC 2 cut(s) 1313, 1378
SmiMI CAYNNNNRTG 2 cut(s) 1141, 1222
SmlI CTYRAG 3 cut(s) 439, 623, 946
SmoI CTYRAG 3 cut(s) 439, 623, 946
SspMI CTAG 2 cut(s) 56, 1349
SstI GAGCTC 2 cut(s) 30, 1471
StyD4I CCNGG 5 cut(s) 130, 598, 679, 919, 1374
StyI CCWWGG 1 cut(s) 1217
TaaI ACNGT 1 cut(s) 188
TaiI ACGT 1 cut(s) 1077
TaqI TCGA 3 cut(s) 712, 1274, 1471
TfiI GAWTC 2 cut(s) 303, 364
Tru1I TTAA 1 cut(s) 440
Tru9I TTAA 1 cut(s) 440
TscAI CASTG 2 cut(s) 1065, 1397
TseFI GTSAC 1 cut(s) 398
TseI GCWGC 4 cut(s) 97, 619, 1166, 1228
Tsp45I GTSAC 1 cut(s) 398
TspRI CASTG 2 cut(s) 1065, 1397
Van91I CCANNNNNTGG 1 cut(s) 1375
Vha464I CTTAAG 1 cut(s) 439
VpaK11BI GGWCC 2 cut(s) 1313, 1378
XapI RAATTY 6 cut(s) 206, 240, 520, 673, 837, 1031
XceI RCATGY 1 cut(s) 406
XcmI CCANNNNNNNNNTGG 1 cut(s) 1351
XmnI GAANNNNTTC 1 cut(s) 302
XspI CTAG 2 cut(s) 56, 1349
Zsp2I ATGCAT 1 cut(s) 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.