Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014448

Physical Location & Seq

Genomic Coordinates Reverse (-)

19455505 .. 19459203

Gene Structure 3699 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G52490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGAGAGCTGGAGGCTGCACGGTGGAGCAAGCCCTCACGGCGGATGCTGCAAACGTGGTGAAACAAGCCATGGGGTTGGCTAGACGGAGAGGACATGCTCAGGTCACACCTCTCCATGTAGCTAGCACCATGCTCTCTGCTCCCACGGGTTTACTTAGAACAGCTTGTCTCCAATCTCACACTCACCCTCTTCAATGCAGAGCCCTCGAGCTCTGCTTCAACGTAGCTTTGAACCGCCTCCCGACCTCTACAGGGAGTCCTATGTTAGGGGTTCCAACTTCCCCTTTCCCTTCTATCTCCAACGCTCTCGGTGCAGCTTTCAAACGCGCACAAGCTCACCAACGACGTGGTTCTATAGAGAGCCAGCAACAACCGATCTTAGCAGTCAAGATCGAAGTGGAGCAGCTCATAATATCTATCCTCGATGATCCTAGCGTGAGTAGAGTGATGAGAGAAGCTGGTTTCTCGAGTCCTCAAGTGAAGACTAAAGTCGAGCAAGCTGTTTCTTTAGAGATTTGCTCTAAAACAACCTCTTCGAGTAAACCCAAAGAGGGGAAGTTATTAACTCCTGTCAGGAACGAGGATGTTATGAACGTTATCAACAATCTTGTCGACAAAAAGAGAAGAAATTTCGTGATCGTAGGAGAGTGTTTAGCCACTATTGACGGAGTTGTGAAGACGGTGATGGAAAAAGTCGACAAAAAAGACGTGCCCGAGGTTTTAAAAGACGTAAAGTTCATAACTTTATCGTTCTCATCGTTCGGGCAACCAAGTAGAGCCGATGTGGAACGTAAGCTAGAGGAGCTAGAGACACTCGTGAAGAGCTGTGTAGGGAAAGGAGTGATTCTAAATCTGGGAGATCTAAACTGGTTCGTAGAGTCAAGAACCAGAGGTTCTTCACTGTATAACAACAACGATAGCTACTGTGTTGTGGAGCATATGATAATGGAGATTGGGAAGTTGGCTTGTGGGTTAGTCATGGGAGATCATGGAAGGTTTTGGTTAATGGGTCTTGCGACTTCACAGACTTACGTGAGATGCAAGTCTGGTCAACCCTCGCTTGAATCTCTCTGGTGTCTCACTACTCTTACTATTCCGGCGACTAGTAATAGTCTCCGGTTGAGTCTCGTCTCCGAGAGTGAGCTTGAAGTCAAGAAATCAGAGAACGTGTCTCTCCAGCTGCAGCAATCATCGGATCAGCTCAGTTTCTGTGAGGAATGTTCCGTCAAGTTTGAATCGGAAGCTCGATTCTTAAAGAGTAGCAATAGCAATGTAACCACTGTAGCATTACCGGCATGGCTTCAGCAGTATAAGAAGGAGAATCAAAATAGTCACACTGATTCAGATTCTATTAAGGAACTTGTGGTGAAGTGGAACTCAATCTGTGATTCAATCCACAAAAGACCATCTCTAAAAACACTCACACTCTCTTCTCCTACTTCTTCCTTTTCTGGTTCCACTCAACCTTCAATCAGTACTCTTCATCATCTTCAAACCAACGGTGATTGGCCCGTGATCGAGACAAACACGCATCGTCATCATTCTGTTGTCCATGAGACATCTCACTTAAGACTGTTCATTCCAGAACATGACAGCGAGCAAAAGACTGAGCTAGTCTGTTCGAATCCTAATTCTACAATGAACTCTGAAGCCTCTTCAAGCGATGCAATGGAGTTGGAACATGCCTCTTCAAGGTTTAAAGAGATGAATGCAGAAAACCTAGCAACTTTATGTGCTGCCTTGGAAAGCAAGGTACCGTGGCAAAAGGATTTAGTCCCGGAGTTAGCCAAAACAGTCTTGAAATGCAGGTCAGGATCGAGTACGAGGAAGATTAACGGAAACGAGGATAAAAAAGAAGATACATGGATGTTCTTCCAAGGTCTTGATGTAGATGCTAAAGAGAAGATCGCTAGAGAATTGGCCAAACTCGTGTTTGGATCGCAAGACAGCTTTGTCTCTATCTGTTTGAGTAGTTTCTCGTCGACAAGATCGGATTCTGCAGAAGATTTGAGGAACAAGAGGTTGAGAGATGAACAAAGCCTGAGTTACATAGAGAGATTCTCGGAAGCTGTTTCGTTGGATCCAAATAGAGTGATCTTAGTTGAAGATATTGAGCAAGCTGATTATTTGTCTCAAGTGGGTTTCAAGAGAGCTGTTGAGAGAGGAAGAGTTTGTAATTCGAGTGGTGAAGAAGCTTCGCTTAAAGACGCGATTGTGATCTTGAGCTGTGAAAGATTTCGTTCAAGATCAAGAGCTTGTTCTCCTCCTAGTAACCAGAAATCGGACGGTTCAGATCAACCTGAGGACAAGAATGTTGCTACTTGTGTTGCACTTGATCTAAACCTATCTATTGATAGTGCGTACGTTTGTGAAGAAGAATCATGTGATGAGATTGGCTTACTCGAAGCGGTAGATGCACGGTTTCATTTCAAGTGTTCATCAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006417 GO:0006950 GO:0006979 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009941 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043335 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0080090 GO:1901700 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04213 map04213

Pfam Domains

Protein Families

Clp_N

Protein Analysis

815

Amino Acids

89.94

Weight (kDa)

6.15

Isoelectric Point (pI)

53.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Clp_N	PF02861	12 - 115	1.6e-06	Clp repeat (R) N-terminal domain
NBD_SMAX1	PF23569	192 - 380	9.4e-61	SMAX1 nucleotide binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52490
fragaria_vesca	FvH4_6g20090
malus_domestica	MD12G1037900.v1.1 MD14G1036900.v1.1
prunus_persica	Prupe.7G097400_v2.0.a1
pyrus_communis	pycom12g03280 pycom14g03230
rosa_chinensis	RchiOBHm_Chr3g0475541
rosa_laevigata	RLG00000023834
rosa_multiflora	Rmu_sc0000539.1_g000022
rosa_roxburghii	Rroxscaffold_6G00406190
rosa_rugosa	Rorug03G0150400
rosa_samantha	Rh3AG199900 Rh3BG230100 Rh3CG224600 Rh3DG225200
rosa_wichuraiana	Rw3G018130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1952
Acc36I	ACCTGC	1 cut(s)	1797
Acc65I	GGTACC	1 cut(s)	1753
AccB1I	GGYRCC	1 cut(s)	1753
AccI	GTMKAC	3 cut(s)	612, 696, 1982
AccII	CGCG	2 cut(s)	327, 2210
AciI	CCGC	3 cut(s)	41, 235, 2408
AclI	AACGTT	1 cut(s)	594
AclWI	GGATC	6 cut(s)	422, 1203, 1822, 1945, 2075, 2088
AcoI	YGGCCR	1 cut(s)	1920
AcsI	RAATTY	1 cut(s)	628
AcuI	CTGAAG	2 cut(s)	1286, 1668
AfaI	GTAC	4 cut(s)	1477, 1755, 1822, 2363
AfiI	CCNNNNNNNGG	7 cut(s)	40, 252, 266, 551, 552, 1692, 2281
AflII	CTTAAG	1 cut(s)	1567
AflIII	ACRYGT	1 cut(s)	1167
AhlI	ACTAGT	1 cut(s)	1103
AjiI	CACGTC	2 cut(s)	347, 709
Alw21I	GWGCWC	1 cut(s)	213
AlwI	GGATC	6 cut(s)	422, 1203, 1822, 1945, 2075, 2088
AlwNI	CAGNNNCTG	1 cut(s)	1209
Ama87I	CYCGRG	3 cut(s)	206, 466, 713
AoxI	GGCC	2 cut(s)	1508, 1920
ApeKI	GCWGC	7 cut(s)	15, 47, 314, 403, 1180, 1183, 1736
ApoI	RAATTY	1 cut(s)	628
Asp700I	GAANNNNTTC	1 cut(s)	2235
Asp718I	GGTACC	1 cut(s)	1753
AspLEI	GCGC	1 cut(s)	329
AspS9I	GGNCC	1 cut(s)	1509
AsuC2I	CCSGG	1 cut(s)	1778
AsuHPI	GGTGA	7 cut(s)	70, 176, 329, 694, 1378, 1514, 2198
AsuII	TTCGAA	1 cut(s)	1622
AsuNHI	GCTAGC	1 cut(s)	122
AvaI	CYCGRG	3 cut(s)	206, 466, 713
AxyI	CCTNAGG	1 cut(s)	2301
BaeGI	GKGCMC	1 cut(s)	714
BalI	TGGCCA	1 cut(s)	1922
BamHI	GGATCC	1 cut(s)	2080
BanI	GGYRCC	1 cut(s)	1753
BanII	GRGCYC	2 cut(s)	205, 213
BauI	CACGAG	2 cut(s)	815, 1928
BbsI	GAAGAC	2 cut(s)	488, 683
Bbv12I	GWGCWC	1 cut(s)	213
BbvI	GCAGC	7 cut(s)	2, 34, 326, 415, 1167, 1195, 1723
BccI	CCATC	2 cut(s)	679, 1414
BceAI	ACGGC	1 cut(s)	54
BcgI	CGANNNNNNTGC	2 cut(s)	187, 221
BcnI	CCSGG	1 cut(s)	1778
BcuI	ACTAGT	1 cut(s)	1103
BfmI	CTRYAG	5 cut(s)	249, 354, 1181, 1281, 1998
BfrI	CTTAAG	1 cut(s)	1567
BfuAI	ACCTGC	1 cut(s)	1797
BglI	GCCNNNNNGGC	1 cut(s)	38
BglII	AGATCT	1 cut(s)	859
BisI	GCNGC	7 cut(s)	16, 48, 315, 404, 1181, 1184, 1737
BlsI	GCNGC	7 cut(s)	17, 49, 316, 405, 1182, 1185, 1738
BmcAI	AGTACT	1 cut(s)	1477
Bme1390I	CCNGG	1 cut(s)	1778
BmeT110I	CYCGRG	3 cut(s)	206, 466, 713
BmgBI	CACGTC	2 cut(s)	347, 709
BmgT120I	GGNCC	1 cut(s)	1509
BmiI	GGNNCC	4 cut(s)	273, 1456, 1755, 2082
BmrFI	CCNGG	1 cut(s)	1778
BmsI	GCATC	6 cut(s)	34, 1028, 1540, 1654, 1882, 2404
BmtI	GCTAGC	1 cut(s)	126
BoxI	GACNNNNGTC	1 cut(s)	488
BpiI	GAAGAC	2 cut(s)	488, 683
BplI	GAGNNNNNCTC	4 cut(s)	503, 535, 2045, 2077
BpmI	CTGGAG	2 cut(s)	30, 1160
Bpu10I	CCTNAGC	1 cut(s)	99
Bpu14I	TTCGAA	1 cut(s)	1622
BpuEI	CTTGAG	3 cut(s)	459, 2118, 2242
BpuMI	CCSGG	1 cut(s)	1778
BsaAI	YACGTR	1 cut(s)	1033
BsaBI	GATNNNNATC	1 cut(s)	2216
BsaJI	CCNNGG	6 cut(s)	69, 144, 714, 1740, 1757, 1876
BsaWI	WCCGGW	1 cut(s)	1116
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 252, 266, 551, 552, 1692, 2281
Bse118I	RCCGGY	1 cut(s)	1291
Bse1I	ACTGG	1 cut(s)	872
Bse21I	CCTNAGG	1 cut(s)	2301
Bse3DI	GCAATG	2 cut(s)	1276, 1674
Bse8I	GATNNNNATC	1 cut(s)	2216
BseDI	CCNNGG	6 cut(s)	69, 144, 714, 1740, 1757, 1876
BseGI	GGATG	3 cut(s)	49, 589, 1872
BseJI	GATNNNNATC	1 cut(s)	2216
BseLI	CCNNNNNNNGG	7 cut(s)	40, 252, 266, 551, 552, 1692, 2281
BseMI	GCAATG	2 cut(s)	1276, 1674
BseMII	CTCAG	5 cut(s)	113, 1216, 1599, 2033, 2292
BseNI	ACTGG	1 cut(s)	872
BseRI	GAGGAG	2 cut(s)	815, 2253
BseSI	GKGCMC	1 cut(s)	714
BseXI	GCAGC	7 cut(s)	2, 34, 326, 415, 1167, 1195, 1723
BsgI	GTGCAG	1 cut(s)	333
Bsh1236I	CGCG	2 cut(s)	327, 2210
BshFI	GGCC	2 cut(s)	1510, 1922
BshNI	GGYRCC	1 cut(s)	1753
BsiHKAI	GWGCWC	1 cut(s)	213
BsiHKCI	CYCGRG	3 cut(s)	206, 466, 713
BsiSI	CCGG	4 cut(s)	1097, 1117, 1292, 1778
BsiWI	CGTACG	1 cut(s)	2361
BslFI	GGGAC	1 cut(s)	1760
BslI	CCNNNNNNNGG	7 cut(s)	40, 252, 266, 551, 552, 1692, 2281
BsmBI	CGTCTC	1 cut(s)	1135
BsmFI	GGGAC	1 cut(s)	1760
BsmI	GAATGC	1 cut(s)	1714
BsnI	GGCC	2 cut(s)	1510, 1922
BsoBI	CYCGRG	3 cut(s)	206, 466, 713
Bsp119I	TTCGAA	1 cut(s)	1622
Bsp1286I	GDGCHC	3 cut(s)	205, 213, 714
Bsp19I	CCATGG	1 cut(s)	69
BspACI	CCGC	3 cut(s)	41, 235, 2408
BspANI	GGCC	2 cut(s)	1510, 1922
BspCNI	CTCAG	5 cut(s)	112, 1215, 1600, 2034, 2293
BspFNI	CGCG	2 cut(s)	327, 2210
BspLI	GGNNCC	4 cut(s)	273, 1456, 1755, 2082
BspMAI	CTGCAG	2 cut(s)	1185, 2002
BspMI	ACCTGC	1 cut(s)	1797
BspOI	GCTAGC	1 cut(s)	126
BspPI	GGATC	6 cut(s)	422, 1203, 1822, 1945, 2075, 2088
BspQI	GCTCTTC	1 cut(s)	815
BspT104I	TTCGAA	1 cut(s)	1622
BspT107I	GGYRCC	1 cut(s)	1753
BspTI	CTTAAG	1 cut(s)	1567
BsrDI	GCAATG	2 cut(s)	1276, 1674
BsrFI	RCCGGY	1 cut(s)	1291
BsrI	ACTGG	1 cut(s)	872
BssAI	RCCGGY	1 cut(s)	1291
BssECI	CCNNGG	6 cut(s)	69, 144, 714, 1740, 1757, 1876
BssSI	CACGAG	2 cut(s)	815, 1928
BssT1I	CCWWGG	3 cut(s)	69, 1740, 1876
Bst2BI	CACGAG	2 cut(s)	815, 1928
Bst6I	CTCTTC	8 cut(s)	195, 538, 815, 1435, 1485, 1660, 1693, 2161
BstAFI	CTTAAG	1 cut(s)	1567
BstBAI	YACGTR	1 cut(s)	1033
BstBI	TTCGAA	1 cut(s)	1622
BstC8I	GCNNGC	6 cut(s)	30, 124, 365, 498, 1598, 2118
BstDEI	CTNAG	8 cut(s)	99, 155, 379, 1202, 1608, 2042, 2098, 2301
BstDSI	CCRYGG	3 cut(s)	69, 144, 1757
BstENI	CCTNNNNNAGG	2 cut(s)	264, 1690
BstF5I	GGATG	3 cut(s)	49, 589, 1872
BstFNI	CGCG	2 cut(s)	327, 2210
BstHHI	GCGC	1 cut(s)	329
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 47, 311, 802, 1292, 2414
BstNSI	RCATGY	2 cut(s)	98, 1685
BstPAI	GACNNNNGTC	1 cut(s)	488
BstSCI	CCNGG	1 cut(s)	1776
BstSFI	CTRYAG	5 cut(s)	249, 354, 1181, 1281, 1998
BstSLI	GKGCMC	1 cut(s)	714
BstUI	CGCG	2 cut(s)	327, 2210
BstV1I	GCAGC	7 cut(s)	2, 34, 326, 415, 1167, 1195, 1723
BstV2I	GAAGAC	2 cut(s)	488, 683
BstX2I	RGATCY	2 cut(s)	859, 2080
BstXI	CCANNNNNNTGG	2 cut(s)	76, 347
BstYI	RGATCY	2 cut(s)	859, 2080
Bsu36I	CCTNAGG	1 cut(s)	2301
BsuRI	GGCC	2 cut(s)	1510, 1922
BtgI	CCRYGG	3 cut(s)	69, 144, 1757
BtgZI	GCGATG	1 cut(s)	1677
BtrI	CACGTC	2 cut(s)	347, 709
BtsCI	GGATG	3 cut(s)	49, 589, 1872
BtsIMutI	CAGTG	3 cut(s)	899, 1278, 1335
BveI	ACCTGC	1 cut(s)	1797
Cac8I	GCNNGC	6 cut(s)	30, 124, 365, 498, 1598, 2118
CaiI	CAGNNNCTG	1 cut(s)	1209
CfoI	GCGC	1 cut(s)	329
Cfr10I	RCCGGY	1 cut(s)	1291
Cfr13I	GGNCC	1 cut(s)	1509
CseI	GACGC	1 cut(s)	2216
Csp6I	GTAC	4 cut(s)	1476, 1754, 1821, 2362
CviQI	GTAC	4 cut(s)	1476, 1754, 1821, 2362
DdeI	CTNAG	8 cut(s)	99, 155, 379, 1202, 1608, 2042, 2098, 2301
DraI	TTTAAA	2 cut(s)	723, 1699
DrdI	GACNNNNNNGTC	1 cut(s)	1952
DseDI	GACNNNNNNGTC	1 cut(s)	1952
EaeI	YGGCCR	1 cut(s)	1920
Eam1104I	CTCTTC	8 cut(s)	195, 538, 815, 1435, 1485, 1660, 1693, 2161
EarI	CTCTTC	8 cut(s)	195, 538, 815, 1435, 1485, 1660, 1693, 2161
EciI	GGCGGA	1 cut(s)	56
Ecl136II	GAGCTC	1 cut(s)	211
Eco130I	CCWWGG	3 cut(s)	69, 1740, 1876
Eco24I	GRGCYC	2 cut(s)	205, 213
Eco53kI	GAGCTC	1 cut(s)	211
Eco57I	CTGAAG	2 cut(s)	1286, 1668
Eco81I	CCTNAGG	1 cut(s)	2301
Eco88I	CYCGRG	3 cut(s)	206, 466, 713
EcoICRI	GAGCTC	1 cut(s)	211
EcoNI	CCTNNNNNAGG	2 cut(s)	264, 1690
EcoT14I	CCWWGG	3 cut(s)	69, 1740, 1876
EcoT38I	GRGCYC	2 cut(s)	205, 213
ErhI	CCWWGG	3 cut(s)	69, 1740, 1876
Esp3I	CGTCTC	1 cut(s)	1135
FalI	AAGNNNNNCTT	2 cut(s)	2184, 2216
FaqI	GGGAC	1 cut(s)	1760
FauNDI	CATATG	1 cut(s)	939
FblI	GTMKAC	3 cut(s)	612, 696, 1982
Fnu4HI	GCNGC	7 cut(s)	16, 48, 315, 404, 1181, 1184, 1737
FokI	GGATG	3 cut(s)	56, 596, 1879
FriOI	GRGCYC	2 cut(s)	205, 213
Fsp4HI	GCNGC	7 cut(s)	16, 48, 315, 404, 1181, 1184, 1737
GlaI	GCGC	1 cut(s)	328
GluI	GCNGC	7 cut(s)	16, 48, 315, 404, 1181, 1184, 1737
GsuI	CTGGAG	2 cut(s)	30, 1160
HaeIII	GGCC	2 cut(s)	1510, 1922
HapII	CCGG	4 cut(s)	1097, 1117, 1292, 1778
HgaI	GACGC	1 cut(s)	2216
HhaI	GCGC	1 cut(s)	329
Hin6I	GCGC	1 cut(s)	327
HinP1I	GCGC	1 cut(s)	327
HincII	GTYRAC	4 cut(s)	613, 697, 1052, 1983
HindII	GTYRAC	4 cut(s)	613, 697, 1052, 1983
HindIII	AAGCTT	1 cut(s)	2193
HpaII	CCGG	4 cut(s)	1097, 1117, 1292, 1778
HphI	GGTGA	7 cut(s)	70, 176, 329, 694, 1378, 1514, 2198
Hpy166II	GTNNAC	6 cut(s)	152, 542, 613, 697, 1052, 1983
Hpy8I	GTNNAC	6 cut(s)	152, 542, 613, 697, 1052, 1983
Hpy99I	CGWCG	2 cut(s)	348, 1984
HpyAV	CCTTC	4 cut(s)	300, 987, 1309, 1476
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 47, 311, 802, 1292, 2414
HpyF3I	CTNAG	8 cut(s)	99, 155, 379, 1202, 1608, 2042, 2098, 2301
HspAI	GCGC	1 cut(s)	327
KpnI	GGTACC	1 cut(s)	1757
LguI	GCTCTTC	1 cut(s)	815
LmnI	GCTCC	5 cut(s)	25, 145, 400, 802, 934
Lsp1109I	GCAGC	7 cut(s)	2, 34, 326, 415, 1167, 1195, 1723
LweI	GCATC	6 cut(s)	34, 1028, 1540, 1654, 1882, 2404
MaeIII	GTNAC	5 cut(s)	103, 1273, 1331, 2045, 2270
MflI	RGATCY	2 cut(s)	859, 2080
MhlI	GDGCHC	3 cut(s)	205, 213, 714
MlsI	TGGCCA	1 cut(s)	1922
MluCI	AATT	4 cut(s)	628, 1630, 1916, 2176
MluNI	TGGCCA	1 cut(s)	1922
MlyI	GAGTC	4 cut(s)	265, 478, 887, 1132
MmeI	TCCRAC	4 cut(s)	299, 324, 1656, 2058
Mox20I	TGGCCA	1 cut(s)	1922
MroXI	GAANNNNTTC	1 cut(s)	2235
MscI	TGGCCA	1 cut(s)	1922
MseI	TTAA	9 cut(s)	563, 722, 1004, 1253, 1353, 1568, 1698, 1833, 2202
Msp20I	TGGCCA	1 cut(s)	1922
MspA1I	CMGCKG	1 cut(s)	1180
MspCI	CTTAAG	1 cut(s)	1567
MspI	CCGG	4 cut(s)	1097, 1117, 1292, 1778
MspR9I	CCNGG	1 cut(s)	1778
Mva1269I	GAATGC	1 cut(s)	1714
MvnI	CGCG	2 cut(s)	327, 2210
MwoI	GCNNNNNNNGC	6 cut(s)	38, 47, 311, 802, 1292, 2414
NciI	CCSGG	1 cut(s)	1778
NcoI	CCATGG	1 cut(s)	69
NdeI	CATATG	1 cut(s)	939
NheI	GCTAGC	1 cut(s)	122
NlaIV	GGNNCC	4 cut(s)	273, 1456, 1755, 2082
NmuCI	GTSAC	2 cut(s)	103, 1331
NspI	RCATGY	2 cut(s)	98, 1685
NspV	TTCGAA	1 cut(s)	1622
PaeR7I	CTCGAG	2 cut(s)	206, 466
PciSI	GCTCTTC	1 cut(s)	815
PcsI	WCGNNNNNNNCGW	1 cut(s)	755
PctI	GAATGC	1 cut(s)	1714
PdmI	GAANNNNTTC	1 cut(s)	2235
Pfl23II	CGTACG	1 cut(s)	2361
PfoI	TCCNGGA	1 cut(s)	1776
PkrI	GCNGC	7 cut(s)	17, 49, 316, 405, 1182, 1185, 1738
PleI	GAGTC	4 cut(s)	264, 477, 886, 1131
PpsI	GAGTC	4 cut(s)	264, 477, 886, 1131
Ppu21I	YACGTR	1 cut(s)	1033
PshAI	GACNNNNGTC	1 cut(s)	488
Psp124BI	GAGCTC	1 cut(s)	213
Psp1406I	AACGTT	1 cut(s)	594
PspLI	CGTACG	1 cut(s)	2361
PspN4I	GGNNCC	4 cut(s)	273, 1456, 1755, 2082
PspPI	GGNCC	1 cut(s)	1509
PspXI	VCTCGAGB	1 cut(s)	206
PstI	CTGCAG	2 cut(s)	1185, 2002
PstNI	CAGNNNCTG	1 cut(s)	1209
PsuI	RGATCY	2 cut(s)	859, 2080
PvuII	CAGCTG	1 cut(s)	1180
RsaI	GTAC	4 cut(s)	1477, 1755, 1822, 2363
RsaNI	GTAC	4 cut(s)	1476, 1754, 1821, 2362
SacI	GAGCTC	1 cut(s)	213
SalI	GTCGAC	3 cut(s)	611, 695, 1981
SapI	GCTCTTC	1 cut(s)	815
SaqAI	TTAA	9 cut(s)	563, 722, 1004, 1253, 1353, 1568, 1698, 1833, 2202
SatI	GCNGC	7 cut(s)	16, 48, 315, 404, 1181, 1184, 1737
Sau96I	GGNCC	1 cut(s)	1509
ScaI	AGTACT	1 cut(s)	1477
SchI	GAGTC	4 cut(s)	265, 478, 887, 1132
ScrFI	CCNGG	1 cut(s)	1778
SduI	GDGCHC	3 cut(s)	205, 213, 714
SfaNI	GCATC	6 cut(s)	34, 1028, 1540, 1654, 1882, 2404
SfcI	CTRYAG	5 cut(s)	249, 354, 1181, 1281, 1998
Sfr274I	CTCGAG	2 cut(s)	206, 466
SfuI	TTCGAA	1 cut(s)	1622
SlaI	CTCGAG	2 cut(s)	206, 466
SmlI	CTYRAG	6 cut(s)	206, 466, 474, 1567, 2133, 2221
SmoI	CTYRAG	6 cut(s)	206, 466, 474, 1567, 2133, 2221
SpeI	ACTAGT	1 cut(s)	1103
Sse9I	AATT	4 cut(s)	628, 1630, 1916, 2176
SsiI	CCGC	3 cut(s)	41, 235, 2408
SstI	GAGCTC	1 cut(s)	213
StyD4I	CCNGG	1 cut(s)	1776
StyI	CCWWGG	3 cut(s)	69, 1740, 1876
TasI	AATT	4 cut(s)	628, 1630, 1916, 2176
TatI	WGTACW	1 cut(s)	1475
Tru1I	TTAA	9 cut(s)	563, 722, 1004, 1253, 1353, 1568, 1698, 1833, 2202
Tru9I	TTAA	9 cut(s)	563, 722, 1004, 1253, 1353, 1568, 1698, 1833, 2202
TscAI	CASTG	3 cut(s)	906, 1285, 1342
TseFI	GTSAC	2 cut(s)	103, 1331
TseI	GCWGC	7 cut(s)	15, 47, 314, 403, 1180, 1183, 1736
Tsp45I	GTSAC	2 cut(s)	103, 1331
TspDTI	ATGAA	9 cut(s)	605, 727, 1472, 1567, 1655, 1721, 2046, 2414, 2427
TspGWI	ACGGA	4 cut(s)	100, 681, 1213, 1851
TspRI	CASTG	3 cut(s)	906, 1285, 1342
Vha464I	CTTAAG	1 cut(s)	1567
XagI	CCTNNNNNAGG	2 cut(s)	264, 1690
XapI	RAATTY	1 cut(s)	628
XceI	RCATGY	2 cut(s)	98, 1685
XhoI	CTCGAG	2 cut(s)	206, 466
XmiI	GTMKAC	3 cut(s)	612, 696, 1982
XmnI	GAANNNNTTC	1 cut(s)	2235
ZrmI	AGTACT	1 cut(s)	1477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.