Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0014448

Physical Location & Seq

Genomic Coordinates Forward (+)

13530132 .. 13533891

Gene Structure 3760 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g20090.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGAGAGCAGGAGGTTGCACACTCCAACAGGGTCTAACTACAGAGGCTGCAAACATAGTAAAGCTTGCACTAACCCTAGCACGGCACCGAGGCCATGCGCAAGTCACTCCACTCCATGTTGCAAACACCATGCTTTCTTCTTCAACCGGCCTATTGCGAACTGCTTGCCTTCAATCACACTCTCACCCACTTCAATGCAAAGCACTTGAGCTTTGCTTCAATGTTGCCCTCAACCGCCTCCCGGCTTCCAATTCAAGCCCCATGTTGGGTGGCGGGCATCACCCTCAAAACCCTTCCATCTCTAATGCCTTGGTCGCTGCTTTCAAGCGCGCGCAGGCTCACCAACGACGCGGTTCCATTGAGAACCAGCAGCAGCCCCTCCTAGCAGTGAAGATAGAGCTGGAGCAACTCATCATTTCAATCTTAGATGATCCAAGTGTAAGTAGAGTCATGAGAGAAGCTGGGTTTTCTAGTACCCAAGTCAAAAGCAATGTAGAACAAGCTGTCTCCTTAGAAATATGTAACTCCCAAACTACTACCACTCCTTGTGTAAGTAGTAGTAAGTCGAAGGAGAGTAATCTCCAGATGAGTCCTTTGTCAGTGGTACCTAATCTAGATCCAGTCAGGAATGAGGATGTGACGAGTGTTCTAGAGAATTTGGTGAAGAAAAGAAGGAAGAGTATTGTGATTGTGGGTGAGTGTCTTGCTAGTGTTGAGGGCGTTGTTAAGGGAGTGATGGAGAAGCTTGATAAGGGAGATCAACATGTTGTCGTTGACGAGGGTTTTAGTTTGAGAGATGTAAAGTATGTAACACTATCTCTCTCCTCTTTTGGACATCTTTCAAGAGTAGAGGTTGAACAGAAACTTGGAGATCTCAAGAGCCTAGTGAGGAGCTGTGTGGGGAAAGGAATAATTTTGTATCTAGGAGATCTCAAGTGGATTACTGAATATAGGGCTAGTAGTAGTTCAAGTCATGATCAGCAGGGAATTAGGGGGTATTATTGTCCAGTGGAGCACATGATCTTGGAGCTTGGGAACCTGGTTTGTGGGATTCATGGGGAGACTAATGGTGGGAGGGTTTGGCTTGTAGGGATTGCTACTTTCCAAACTTACATGAGATGCAAATCTGGCCATCCATCACTTGAGACTGTTTGGGGTATTCATCCTCTAACGATTCCCTTAACCAGCCTGCGCTTGAGTCTTGTCACAGCAGAAAGTGAACTGCACAGTGAATCTACAAGCAAGATAGCTGAAAGTGGAACTAGCAGACTAGTAATACTAGAAGGTGGAGATCAAAAGCAGCTCACTTGCTGTGATGAATGCTCAGCCAAGTTCGAAGAAGAAGCTCAAAGCTTACGAAGCAGTAGCATCTGTAACAGTGAATCCACCACATCAAGCCTTCCTGCATGGCTCCAACAGTACAAGAATGAGAACAAAGGACTAAACGCAACAACTAATAATCATCAGAACTTTGTCTCAGTTTCAGACCTTTGCAAAAAGTGGAACTCCATTTGCAAAGCAATGCACCACCAACAACATTCCAATAATTCTTCTGAGCTCAAGACCCTCACAATATTCTCTTCCCTCTCACCCTCTTCCTCAACTTCCGGTTTTTCCTATGAGCAACAACAATACCCTACTTTGCACCACCATCATTCTTGGAGGGACCAACAAATCTGGATACCCGACGCTCGTGACAAAGCTGTCGAACCCAATTTGACAATGTACTCATTAAATCCTAATTCCACTCCTAATTCGGCTACATCGAGTGATGTCATGGAGATGGACTATGTTCCAAGGTTCAAGGAGATCAATGGCGAGAACCTGAAAACCCTATGCAATGCATTGGAGACAAAAGTGCCGTGGCAGAAGAATATAATTCCGGACATCGCCTCCACAATCTTGAGATGCAGGTCCGGAATGGTCAGAAGAAAAGGGAGTAAGGTGGGCACTAATTTCAGTCCCGAGGTAAAAGAGGAAACATGGTTGTTCTTTCAAGGTCTTGATATGGAAGCTAAGGAAAAAGTTGCAAGGGAATTAGCTCGTCTTGTTTTCGGGTCTCAAACCAACCTCATTTCCATTGCACTAAGCAGTTTCTCGTCGACTCGAGCAGACTCAACCGATGATTGTAGAAGCAAGAGACCACGAGATGAACAAAGTTGCAGTTATGTGGAAAGATTCGCTGAGGCGGTGGCGTTGAATCCACATAGGGTTTTTTTAGTTGAAGACGTAGAGCAAGCAGACTATTGCTCACAAATGGGATTTAAGAGAGCGATGGAAAGAGGAAGGATAACAAATTCGAGTGGCGAAGAAGTTGGCCTTGGAGATGCCATCATTATTTTGAGCTGCGAAAGCTTTAGTTCGAGATCAAGAGCTTGCTCTCCCCCTATAAAGCAAAAATCATCAGAAGAAGAAGATCATAAGGATTCAAGTCCTTGTGCGTCTTTGGATTTGAACATTTCGTTTGATGATGACGACGTTGATGACGATCAGTCAATTGATGACATTGGTCTTCTTGAATCGGTTGATAGAAGAATCATTTTCAAAATTCAAGAACTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006417 GO:0006950 GO:0006979 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009941 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043335 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0080090 GO:1901700 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04213 map04213

Pfam Domains

Protein Families

Clp_N

Protein Analysis

854

Amino Acids

94.17

Weight (kDa)

6.14

Isoelectric Point (pI)

49.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Clp_N	PF02861	12 - 116	2.3e-06	Clp repeat (R) N-terminal domain
NBD_SMAX1	PF23569	210 - 403	6.8e-63	SMAX1 nucleotide binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52490
fragaria_vesca	FvH4_6g20090
malus_domestica	MD12G1037900.v1.1 MD14G1036900.v1.1
prunus_persica	Prupe.7G097400_v2.0.a1
pyrus_communis	pycom12g03280 pycom14g03230
rosa_chinensis	RchiOBHm_Chr3g0475541
rosa_laevigata	RLG00000023834
rosa_multiflora	Rmu_sc0000539.1_g000022
rosa_roxburghii	Rroxscaffold_6G00406190
rosa_rugosa	Rorug03G0150400
rosa_samantha	Rh3AG199900 Rh3BG230100 Rh3CG224600 Rh3DG225200
rosa_wichuraiana	Rw3G018130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1703
Acc16I	TGCGCA	1 cut(s)	99
Acc36I	ACCTGC	1 cut(s)	1902
Acc65I	GGTACC	1 cut(s)	604
AccB1I	GGYRCC	2 cut(s)	84, 604
AccI	GTMKAC	1 cut(s)	2102
AccII	CGCG	3 cut(s)	330, 332, 351
AccIII	TCCGGA	2 cut(s)	1882, 1916
AciI	CCGC	4 cut(s)	235, 273, 351, 2189
AclWI	GGATC	2 cut(s)	425, 611
AcoI	YGGCCR	1 cut(s)	1129
AcsI	RAATTY	3 cut(s)	655, 2296, 2547
AfaI	GTAC	4 cut(s)	475, 606, 1421, 1727
AfiI	CCNNNNNNNGG	4 cut(s)	81, 241, 265, 266
AflIII	ACRYGT	1 cut(s)	763
AhdI	GACNNNNNGTC	1 cut(s)	2491
AhlI	ACTAGT	1 cut(s)	1270
AjnI	CCWGG	1 cut(s)	1038
AjuI	GAANNNNNNNTTGG	4 cut(s)	849, 881, 2304, 2336
Alw21I	GWGCWC	2 cut(s)	1017, 1560
Alw26I	GTCTC	7 cut(s)	511, 1055, 1139, 1480, 1844, 2064, 2134
AlwI	GGATC	2 cut(s)	425, 611
AlwNI	CAGNNNCTG	1 cut(s)	47
Ama87I	CYCGRG	2 cut(s)	1964, 2106
Aor13HI	TCCGGA	2 cut(s)	1882, 1916
AoxI	GGCC	4 cut(s)	91, 148, 1129, 2317
ApeKI	GCWGC	6 cut(s)	47, 317, 370, 373, 1300, 2346
ApoI	RAATTY	3 cut(s)	655, 2296, 2547
Asp718I	GGTACC	1 cut(s)	604
AspLEI	GCGC	5 cut(s)	100, 330, 332, 334, 1194
AspS9I	GGNCC	2 cut(s)	1666, 1914
AsuC2I	CCSGG	1 cut(s)	242
AsuHPI	GGTGA	6 cut(s)	176, 272, 332, 673, 707, 1581
AsuII	TTCGAA	1 cut(s)	1335
AvaI	CYCGRG	2 cut(s)	1964, 2106
AvaII	GGWCC	2 cut(s)	1666, 1914
BaeGI	GKGCMC	1 cut(s)	1952
BalI	TGGCCA	1 cut(s)	1131
BanI	GGYRCC	2 cut(s)	84, 604
BanII	GRGCYC	1 cut(s)	1560
BauI	CACGAG	2 cut(s)	1692, 2145
BbsI	GAAGAC	2 cut(s)	2232, 2504
Bbv12I	GWGCWC	2 cut(s)	1017, 1560
BbvCI	CCTCAGC	1 cut(s)	2184
BbvI	GCAGC	6 cut(s)	34, 304, 382, 385, 1312, 2333
BccI	CCATC	8 cut(s)	305, 730, 1140, 1144, 1659, 1777, 2269, 2339
BceAI	ACGGC	2 cut(s)	98, 1846
BcgI	CGANNNNNNTGC	2 cut(s)	147, 181
BciT130I	CCWGG	1 cut(s)	1040
BciVI	GTATCC	1 cut(s)	1674
BclI	TGATCA	1 cut(s)	976
BcnI	CCSGG	1 cut(s)	242
BcoDI	GTCTC	7 cut(s)	511, 1055, 1139, 1480, 1844, 2064, 2134
BcuI	ACTAGT	1 cut(s)	1270
BfmI	CTRYAG	1 cut(s)	39
BfuAI	ACCTGC	1 cut(s)	1902
BfuI	GTATCC	1 cut(s)	1674
BglII	AGATCT	2 cut(s)	871, 928
BisI	GCNGC	6 cut(s)	48, 318, 371, 374, 1301, 2347
BlpI	GCTNAGC	1 cut(s)	1324
BlsI	GCNGC	6 cut(s)	49, 319, 372, 375, 1302, 2348
Bme1390I	CCNGG	2 cut(s)	242, 1040
Bme18I	GGWCC	2 cut(s)	1666, 1914
BmeRI	GACNNNNNGTC	1 cut(s)	2491
BmeT110I	CYCGRG	2 cut(s)	1964, 2106
BmgT120I	GGNCC	2 cut(s)	1666, 1914
BmiI	GGNNCC	6 cut(s)	86, 355, 606, 1037, 1412, 1667
BmrFI	CCNGG	2 cut(s)	242, 1040
BmsI	GCATC	5 cut(s)	286, 1109, 1377, 1898, 2317
BoxI	GACNNNNGTC	1 cut(s)	2508
BpiI	GAAGAC	2 cut(s)	2232, 2504
BpmI	CTGGAG	2 cut(s)	422, 566
Bpu10I	CCTNAGC	2 cut(s)	2016, 2184
Bpu1102I	GCTNAGC	1 cut(s)	1324
Bpu14I	TTCGAA	1 cut(s)	1335
BpuEI	CTTGAG	7 cut(s)	227, 860, 917, 1163, 1216, 1544, 1924
BpuMI	CCSGG	1 cut(s)	242
BsaBI	GATNNNNATC	2 cut(s)	1123, 2487
BsaI	GGTCTC	2 cut(s)	2064, 2134
BsaJI	CCNNGG	6 cut(s)	88, 309, 1796, 1862, 1965, 2320
BsaWI	WCCGGW	3 cut(s)	1607, 1882, 1916
BsaXI	ACNNNNNCTCC	4 cut(s)	526, 556, 1877, 1907
Bsc4I	CCNNNNNNNGG	4 cut(s)	81, 241, 265, 266
Bse118I	RCCGGY	1 cut(s)	146
Bse1I	ACTGG	2 cut(s)	620, 1007
Bse3DI	GCAATG	4 cut(s)	496, 1527, 1846, 2079
Bse8I	GATNNNNATC	2 cut(s)	1123, 2487
BseAI	TCCGGA	2 cut(s)	1882, 1916
BseBI	CCWGG	1 cut(s)	1040
BseDI	CCNNGG	6 cut(s)	88, 309, 1796, 1862, 1965, 2320
BseGI	GGATG	3 cut(s)	640, 1132, 1162
BseJI	GATNNNNATC	2 cut(s)	1123, 2487
BseLI	CCNNNNNNNGG	4 cut(s)	81, 241, 265, 266
BseMI	GCAATG	4 cut(s)	496, 1527, 1846, 2079
BseMII	CTCAG	4 cut(s)	1338, 1491, 1545, 2175
BseNI	ACTGG	2 cut(s)	620, 1007
BsePI	GCGCGC	2 cut(s)	328, 330
BseRI	GAGGAG	2 cut(s)	814, 904
BseSI	GKGCMC	1 cut(s)	1952
BseXI	GCAGC	6 cut(s)	34, 304, 382, 385, 1312, 2333
BseYI	CCCAGC	1 cut(s)	461
BsgI	GTGCAG	1 cut(s)	1208
Bsh1236I	CGCG	3 cut(s)	330, 332, 351
BshFI	GGCC	4 cut(s)	93, 150, 1131, 2319
BshNI	GGYRCC	2 cut(s)	84, 604
BsiHKAI	GWGCWC	2 cut(s)	1017, 1560
BsiHKCI	CYCGRG	2 cut(s)	1964, 2106
BsiSI	CCGG	5 cut(s)	147, 242, 1608, 1883, 1917
BslFI	GGGAC	2 cut(s)	1679, 1947
BslI	CCNNNNNNNGG	4 cut(s)	81, 241, 265, 266
BsmAI	GTCTC	7 cut(s)	511, 1055, 1139, 1480, 1844, 2064, 2134
BsmFI	GGGAC	2 cut(s)	1679, 1947
BsmI	GAATGC	1 cut(s)	1325
BsnI	GGCC	4 cut(s)	93, 150, 1131, 2319
Bso31I	GGTCTC	2 cut(s)	2064, 2134
BsoBI	CYCGRG	2 cut(s)	1964, 2106
Bsp119I	TTCGAA	1 cut(s)	1335
Bsp1286I	GDGCHC	3 cut(s)	1017, 1560, 1952
Bsp13I	TCCGGA	2 cut(s)	1882, 1916
Bsp1720I	GCTNAGC	1 cut(s)	1324
BspACI	CCGC	4 cut(s)	235, 273, 351, 2189
BspANI	GGCC	4 cut(s)	93, 150, 1131, 2319
BspCNI	CTCAG	4 cut(s)	1337, 1490, 1546, 2176
BspEI	TCCGGA	2 cut(s)	1882, 1916
BspFNI	CGCG	3 cut(s)	330, 332, 351
BspHI	TCATGA	2 cut(s)	450, 973
BspLI	GGNNCC	6 cut(s)	86, 355, 606, 1037, 1412, 1667
BspMI	ACCTGC	1 cut(s)	1902
BspPI	GGATC	2 cut(s)	425, 611
BspT104I	TTCGAA	1 cut(s)	1335
BspT107I	GGYRCC	2 cut(s)	84, 604
BspTNI	GGTCTC	2 cut(s)	2064, 2134
BsrDI	GCAATG	4 cut(s)	496, 1527, 1846, 2079
BsrFI	RCCGGY	1 cut(s)	146
BsrI	ACTGG	2 cut(s)	620, 1007
BssAI	RCCGGY	1 cut(s)	146
BssECI	CCNNGG	6 cut(s)	88, 309, 1796, 1862, 1965, 2320
BssHII	GCGCGC	2 cut(s)	328, 330
BssSI	CACGAG	2 cut(s)	1692, 2145
BssT1I	CCWWGG	3 cut(s)	309, 1796, 2320
Bst2BI	CACGAG	2 cut(s)	1692, 2145
Bst2UI	CCWGG	1 cut(s)	1040
Bst4CI	ACNGT	4 cut(s)	1150, 1229, 1379, 1419
Bst6I	CTCTTC	3 cut(s)	671, 1585, 1600
BstBI	TTCGAA	1 cut(s)	1335
BstC8I	GCNNGC	9 cut(s)	66, 166, 275, 330, 332, 336, 1190, 2238, 2377
BstDEI	CTNAG	8 cut(s)	424, 511, 1324, 1477, 1554, 2016, 2087, 2184
BstDSI	CCRYGG	1 cut(s)	1862
BstF5I	GGATG	3 cut(s)	640, 1132, 1162
BstFNI	CGCG	3 cut(s)	330, 332, 351
BstHHI	GCGC	5 cut(s)	100, 330, 332, 334, 1194
BstMAI	GTCTC	7 cut(s)	511, 1055, 1139, 1480, 1844, 2064, 2134
BstMWI	GCNNNNNNNGC	4 cut(s)	314, 1128, 1359, 2352
BstNI	CCWGG	1 cut(s)	1040
BstNSI	RCATGY	1 cut(s)	767
BstPAI	GACNNNNGTC	1 cut(s)	2508
BstSCI	CCNGG	2 cut(s)	240, 1038
BstSFI	CTRYAG	1 cut(s)	39
BstSLI	GKGCMC	1 cut(s)	1952
BstUI	CGCG	3 cut(s)	330, 332, 351
BstV1I	GCAGC	6 cut(s)	34, 304, 382, 385, 1312, 2333
BstV2I	GAAGAC	2 cut(s)	2232, 2504
BstX2I	RGATCY	3 cut(s)	616, 871, 928
BstYI	RGATCY	3 cut(s)	616, 871, 928
BsuI	GTATCC	1 cut(s)	1674
BsuRI	GGCC	4 cut(s)	93, 150, 1131, 2319
BtgI	CCRYGG	1 cut(s)	1862
BtgZI	GCGATG	2 cut(s)	1873, 2288
BtsCI	GGATG	3 cut(s)	640, 1132, 1162
BtsI	GCAGTG	1 cut(s)	393
BtsIMutI	CAGTG	5 cut(s)	393, 606, 1014, 1234, 1384
BveI	ACCTGC	1 cut(s)	1902
Cac8I	GCNNGC	9 cut(s)	66, 166, 275, 330, 332, 336, 1190, 2238, 2377
CaiI	CAGNNNCTG	1 cut(s)	47
CciI	TCATGA	2 cut(s)	450, 973
CfoI	GCGC	5 cut(s)	100, 330, 332, 334, 1194
Cfr10I	RCCGGY	1 cut(s)	146
Cfr13I	GGNCC	2 cut(s)	1666, 1914
CseI	GACGC	3 cut(s)	357, 1697, 2430
CsiI	ACCWGGT	1 cut(s)	1038
Csp6I	GTAC	4 cut(s)	474, 605, 1420, 1726
CviQI	GTAC	4 cut(s)	474, 605, 1420, 1726
DdeI	CTNAG	8 cut(s)	424, 511, 1324, 1477, 1554, 2016, 2087, 2184
DrdI	GACNNNNNNGTC	1 cut(s)	1703
DriI	GACNNNNNGTC	1 cut(s)	2491
DseDI	GACNNNNNNGTC	1 cut(s)	1703
EaeI	YGGCCR	1 cut(s)	1129
Eam1104I	CTCTTC	3 cut(s)	671, 1585, 1600
Eam1105I	GACNNNNNGTC	1 cut(s)	2491
EarI	CTCTTC	3 cut(s)	671, 1585, 1600
Ecl136II	GAGCTC	1 cut(s)	1558
Eco130I	CCWWGG	3 cut(s)	309, 1796, 2320
Eco24I	GRGCYC	1 cut(s)	1560
Eco31I	GGTCTC	2 cut(s)	2064, 2134
Eco47I	GGWCC	2 cut(s)	1666, 1914
Eco53kI	GAGCTC	1 cut(s)	1558
Eco88I	CYCGRG	2 cut(s)	1964, 2106
EcoICRI	GAGCTC	1 cut(s)	1558
EcoRII	CCWGG	1 cut(s)	1038
EcoT14I	CCWWGG	3 cut(s)	309, 1796, 2320
EcoT22I	ATGCAT	1 cut(s)	1846
EcoT38I	GRGCYC	1 cut(s)	1560
ErhI	CCWWGG	3 cut(s)	309, 1796, 2320
FalI	AAGNNNNNCTT	2 cut(s)	2304, 2336
FaqI	GGGAC	2 cut(s)	1679, 1947
FauI	CCCGC	1 cut(s)	266
FbaI	TGATCA	1 cut(s)	976
FblI	GTMKAC	1 cut(s)	2102
Fnu4HI	GCNGC	6 cut(s)	48, 318, 371, 374, 1301, 2347
FokI	GGATG	3 cut(s)	647, 1119, 1149
FriOI	GRGCYC	1 cut(s)	1560
Fsp4HI	GCNGC	6 cut(s)	48, 318, 371, 374, 1301, 2347
FspI	TGCGCA	1 cut(s)	99
GlaI	GCGC	5 cut(s)	99, 329, 331, 333, 1193
GluI	GCNGC	6 cut(s)	48, 318, 371, 374, 1301, 2347
GsaI	CCCAGC	1 cut(s)	465
GsuI	CTGGAG	2 cut(s)	422, 566
HaeIII	GGCC	4 cut(s)	93, 150, 1131, 2319
HapII	CCGG	5 cut(s)	147, 242, 1608, 1883, 1917
HgaI	GACGC	3 cut(s)	357, 1697, 2430
HhaI	GCGC	5 cut(s)	100, 330, 332, 334, 1194
Hin6I	GCGC	5 cut(s)	98, 328, 330, 332, 1192
HinP1I	GCGC	5 cut(s)	98, 328, 330, 332, 1192
HincII	GTYRAC	2 cut(s)	775, 2103
HindII	GTYRAC	2 cut(s)	775, 2103
HindIII	AAGCTT	4 cut(s)	62, 743, 1351, 2353
HpaII	CCGG	5 cut(s)	147, 242, 1608, 1883, 1917
HphI	GGTGA	6 cut(s)	176, 272, 332, 673, 707, 1581
Hpy166II	GTNNAC	3 cut(s)	775, 1220, 2103
Hpy188I	TCNGA	5 cut(s)	1467, 1486, 1555, 1928, 2407
Hpy8I	GTNNAC	3 cut(s)	775, 1220, 2103
Hpy99I	CGWCG	4 cut(s)	351, 1691, 2104, 2480
HpyAV	CCTTC	7 cut(s)	179, 303, 562, 666, 1277, 1409, 2280
HpyCH4III	ACNGT	4 cut(s)	1150, 1229, 1379, 1419
HpyCH4IV	ACGT	2 cut(s)	2229, 2478
HpyF10VI	GCNNNNNNNGC	4 cut(s)	314, 1128, 1359, 2352
HpyF3I	CTNAG	8 cut(s)	424, 511, 1324, 1477, 1554, 2016, 2087, 2184
HpySE526I	ACGT	2 cut(s)	2229, 2478
HspAI	GCGC	5 cut(s)	98, 328, 330, 332, 1192
Kpn2I	TCCGGA	2 cut(s)	1882, 1916
KpnI	GGTACC	1 cut(s)	608
Ksp22I	TGATCA	1 cut(s)	976
LmnI	GCTCC	5 cut(s)	403, 891, 1012, 1027, 1416
Lsp1109I	GCAGC	6 cut(s)	34, 304, 382, 385, 1312, 2333
LweI	GCATC	5 cut(s)	286, 1109, 1377, 1898, 2317
MabI	ACCWGGT	1 cut(s)	1038
MaeII	ACGT	2 cut(s)	2229, 2478
MaeIII	GTNAC	7 cut(s)	103, 521, 637, 808, 1204, 1373, 1694
MfeI	CAATTG	1 cut(s)	2496
MflI	RGATCY	3 cut(s)	616, 871, 928
MhlI	GDGCHC	3 cut(s)	1017, 1560, 1952
MlsI	TGGCCA	1 cut(s)	1131
MluNI	TGGCCA	1 cut(s)	1131
MlyI	GAGTC	5 cut(s)	456, 598, 1207, 2098, 2108
MmeI	TCCRAC	2 cut(s)	49, 1438
Mox20I	TGGCCA	1 cut(s)	1131
Mph1103I	ATGCAT	1 cut(s)	1846
MroI	TCCGGA	2 cut(s)	1882, 1916
MscI	TGGCCA	1 cut(s)	1131
MseI	TTAA	4 cut(s)	726, 1181, 1733, 2265
MslI	CAYNNNNRTG	2 cut(s)	193, 1781
Msp20I	TGGCCA	1 cut(s)	1131
MspI	CCGG	5 cut(s)	147, 242, 1608, 1883, 1917
MspR9I	CCNGG	2 cut(s)	242, 1040
MunI	CAATTG	1 cut(s)	2496
Mva1269I	GAATGC	1 cut(s)	1325
MvaI	CCWGG	1 cut(s)	1040
MvnI	CGCG	3 cut(s)	330, 332, 351
MwoI	GCNNNNNNNGC	4 cut(s)	314, 1128, 1359, 2352
NciI	CCSGG	1 cut(s)	242
NlaIV	GGNNCC	6 cut(s)	86, 355, 606, 1037, 1412, 1667
NmuCI	GTSAC	4 cut(s)	103, 637, 1204, 1694
NsbI	TGCGCA	1 cut(s)	99
NsiI	ATGCAT	1 cut(s)	1846
NspI	RCATGY	1 cut(s)	767
NspV	TTCGAA	1 cut(s)	1335
PaeR7I	CTCGAG	1 cut(s)	2106
PagI	TCATGA	2 cut(s)	450, 973
PauI	GCGCGC	2 cut(s)	328, 330
PciI	ACATGT	1 cut(s)	763
PcsI	WCGNNNNNNNCGW	2 cut(s)	1763, 2484
PctI	GAATGC	1 cut(s)	1325
PfeI	GAWTC	9 cut(s)	1051, 1174, 1232, 1382, 2178, 2200, 2426, 2519, 2535
PkrI	GCNGC	6 cut(s)	49, 319, 372, 375, 1302, 2348
PleI	GAGTC	5 cut(s)	455, 597, 1206, 2098, 2108
PpsI	GAGTC	5 cut(s)	455, 597, 1206, 2098, 2108
PscI	ACATGT	1 cut(s)	763
PshAI	GACNNNNGTC	1 cut(s)	2508
Psp124BI	GAGCTC	1 cut(s)	1560
Psp6I	CCWGG	1 cut(s)	1038
PspFI	CCCAGC	1 cut(s)	461
PspGI	CCWGG	1 cut(s)	1038
PspN4I	GGNNCC	6 cut(s)	86, 355, 606, 1037, 1412, 1667
PspPI	GGNCC	2 cut(s)	1666, 1914
PspXI	VCTCGAGB	1 cut(s)	2106
PstNI	CAGNNNCTG	1 cut(s)	47
PsuI	RGATCY	3 cut(s)	616, 871, 928
PteI	GCGCGC	2 cut(s)	328, 330
RsaI	GTAC	4 cut(s)	475, 606, 1421, 1727
RsaNI	GTAC	4 cut(s)	474, 605, 1420, 1726
RseI	CAYNNNNRTG	2 cut(s)	193, 1781
SacI	GAGCTC	1 cut(s)	1560
SalI	GTCGAC	1 cut(s)	2101
SaqAI	TTAA	4 cut(s)	726, 1181, 1733, 2265
SatI	GCNGC	6 cut(s)	48, 318, 371, 374, 1301, 2347
Sau96I	GGNCC	2 cut(s)	1666, 1914
SchI	GAGTC	5 cut(s)	456, 598, 1207, 2098, 2108
ScrFI	CCNGG	2 cut(s)	242, 1040
SduI	GDGCHC	3 cut(s)	1017, 1560, 1952
SexAI	ACCWGGT	1 cut(s)	1038
SfaNI	GCATC	5 cut(s)	286, 1109, 1377, 1898, 2317
SfcI	CTRYAG	1 cut(s)	39
Sfr274I	CTCGAG	1 cut(s)	2106
SfuI	TTCGAA	1 cut(s)	1335
SinI	GGWCC	2 cut(s)	1666, 1914
SlaI	CTCGAG	1 cut(s)	2106
SmiMI	CAYNNNNRTG	2 cut(s)	193, 1781
SmlI	CTYRAG	8 cut(s)	206, 875, 932, 1142, 1195, 1559, 1903, 2106
SmoI	CTYRAG	8 cut(s)	206, 875, 932, 1142, 1195, 1559, 1903, 2106
SpeI	ACTAGT	1 cut(s)	1270
SsiI	CCGC	4 cut(s)	235, 273, 351, 2189
SspI	AATATT	1 cut(s)	1575
SstI	GAGCTC	1 cut(s)	1560
StyD4I	CCNGG	2 cut(s)	240, 1038
StyI	CCWWGG	3 cut(s)	309, 1796, 2320
TaaI	ACNGT	4 cut(s)	1150, 1229, 1379, 1419
TaiI	ACGT	2 cut(s)	2232, 2481
TaqI	TCGA	8 cut(s)	566, 1335, 1707, 1766, 2102, 2107, 2300, 2363
TatI	WGTACW	2 cut(s)	1419, 1725
TfiI	GAWTC	9 cut(s)	1051, 1174, 1232, 1382, 2178, 2200, 2426, 2519, 2535
Tru1I	TTAA	4 cut(s)	726, 1181, 1733, 2265
Tru9I	TTAA	4 cut(s)	726, 1181, 1733, 2265
TscAI	CASTG	5 cut(s)	393, 606, 1014, 1234, 1384
TseFI	GTSAC	4 cut(s)	103, 637, 1204, 1694
TseI	GCWGC	6 cut(s)	47, 317, 370, 373, 1300, 2346
Tsp45I	GTSAC	4 cut(s)	103, 637, 1204, 1694
TspDTI	ATGAA	4 cut(s)	1043, 1151, 1332, 2166
TspRI	CASTG	5 cut(s)	393, 606, 1014, 1234, 1384
VpaK11BI	GGWCC	2 cut(s)	1666, 1914
XapI	RAATTY	3 cut(s)	655, 2296, 2547
XbaI	TCTAGA	2 cut(s)	613, 649
XceI	RCATGY	1 cut(s)	767
XhoI	CTCGAG	1 cut(s)	2106
XmiI	GTMKAC	1 cut(s)	2102
Zsp2I	ATGCAT	1 cut(s)	1846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.