AT3G52640

Nicastrin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0012086
Physical Location & Seq
Reverse (-)
19514837 .. 19520596
5760 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G52640.1

Sequence Viewer

Length: 2031 bp
ATGGCAATGGGACTTATTCGTCTTCTTTCTATAGCTTTTACACTTGTTCTACTTTCAATCCTTCCTCTTCATCTCTCTCTCGCTGATGAGATAACATCTATTGAATCTGTACCTGACCTTCAGAAGCTAATGTATGTTGCTGTTGATGGGTTTCCTTGTGTACGTCTTCTCAATCTGTCTGGAGAGATTGGATGTTCAAATCCTGGAATAAATAAAGTGGTGGCTCCAATCATAAAATTAAAGGACGTTAAAGATTTGGTTCAGCCACACACTATTTTGGTTACAGCTGATGAAATGGAAGATTTCTTTACCAGGGTGTCAACTGATTTGAGCTTTGCTAGCAAAATTGGTGGTGTTCTAGTTGAATCAGGATCTAATTTCCAACAAAAGTTAAAAGGGTTTTCTCCTGATAAAAGGTTTCCTCAAGCCCAGTTTTCACCCTATGAAAACGTTGAGTACAAATGGAATTCAGCTGCATCAAGCATCATGTGGAGAAATTATAATTTTCCTGTGTACTTATTGTCAGAAAGTGGCATATCAGCTGTGCATGAGATCCTTTCCAAGAAAAAGATGAAGCATGGAACATATACCAGTGATGTTGCTGAATTCAATATGGTTATGGAGACTACCAAAGCTGGAACACACAATTCGGAGGCTTGTTTGCAGGAGGGAACTTGCCTCCCATTGGGCGGATATAGTGTTTGGTCCTCGCTTCCACCAATCAGTGTTTCGTCTTCCAACAATCGCAAACCAGTTGTGCTGACTGTGGCCTCCATGGATACTGCATCATTTTTCCGTGACAAAAGTTTTGGTGCAGATTCACCAATATCTGGTCTGGTAGCTCTTCTAGGAGCAGTTGATGCTCTTTCTCGAGTTGATGGTATTAGTAATCTCAAAAAACAGCTTGTGTTTTTGGTTCTGACCGGAGAGACATGGGGTTACCTTGGCAGCAGGAGGTTCTTACACGAATTAGATCTGCATTCAGATGCTGTCGCAGGCCTTAGCAATACTTCGATTGAAACGGTGCTTGAAATAGGATCTGTTGGAAAAGGTTTAAGTGGAGGGATAAACACCTTCTTTGCTCATAAAACAAGGGTTTCTTCAGTTACAAACATGACACTGGATGCTTTAAAGATAGCTCAGGATTCACTTGCATCAAAAAACATCAAAATTCTTTCAGCAGATACTGCAAACCCTGGAATACCCCCATCCTCCTTGATGGCTTTCATGAGAAAGAACCCTCAGACTTCAGCTGTTGTACTTGAAGACTTTGATACCAACTTTGTGAATAAGTTCTACCATAGTCACCTCGATGACTTGTCAAATATCAACTCCTCGTCTGTAGTAGCTGCTGCTTCTGTTGTGGCCCGAACACTTTACATCCTAGCAAGTGACAACAAAGATACAAGCAATTCAGCTCTGGGATCCATCCATGTCAATGCTTCTTTCGTTGAAGAGCTTCTAACCTGTCTTTTAGCTTGTGAACCGGGCTTATCTTGCAACTTGGTAAAAGACTATATTTCACCGACAAACACTTGTCCAGGCAACTATGCTGGCGTCATCCTCGGAGAACCTTCCTCCAAACCTTACCTTGGTTACGTCGGTGATGTTTCTAGATTCCTATGGAACTTTCTGGCAGATAAAACATCTGTCCAAAAGGGAAATACAACCTCAGTTTGTTCAAAAGGAGTCTGTAGCAAAACTGACGAAGTGTGCATCAAAGCAGAGAGCAACAAGGAAGGAACATGTGTTGTCTCCACAACCAGGTATGTTCCAGCTTATTCAACTCGATTGAAGTATAACGATGGAGCTTGGACAATTCTACCACAGAACTCATCAGATTCTATGGGGATGGTTGATCCAGTGTGGACCGAAAGCAACTGGGACACTTTAAGGGTGCATGTGTACACAGTCCAGCACTCAGCATACGACAATGCAGTCCTCGTTGCAGGTATTACAGTCACAACGTTGGCTTACATCGGAATTTTGGCTGCTAAGTCAATCATCACAAAAGCCTTGAAGCAGGACTGA

Protein Analysis

676

Amino Acids

73.01

Weight (kDa)

6.04

Isoelectric Point (pI)

32.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ncstrn_small PF18266 52 - 209 1.3e-39 Nicastrin small lobe
Peptidase_M28 PF04389 247 - 457 5.7e-06 Peptidase family M28
Nicastrin PF05450 251 - 460 8.3e-86 Nicastrin large lobe
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52640 AT3G52640 AT3G52640
fragaria_vesca FvH4_1g30060
malus_domestica MD17G1267200.v1.1
prunus_persica Prupe.3G165300_v2.0.a1 Prupe.3G165300_v2.0.a1
pyrus_communis pycom17g26630
rosa_chinensis RchiOBHm_Chr3g0492061
rosa_laevigata RLG00000022797
rosa_multiflora Rmu_sc0003846.1_g000020 Rmu_sc0042516.1_g000001
rosa_roxburghii Rroxscaffold_6G00392600
rosa_rugosa Rorug03G0251500
rosa_samantha Rh3AG301700 Rh3BG337500 Rh3CG335000 Rh3DG337100
rosa_wichuraiana Rw3G026630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 501
AasI GACNNNNNNGTC 2 cut(s) 18, 1937
Acc36I ACCTGC 1 cut(s) 1940
AccB7I CCANNNNNTGG 1 cut(s) 830
AciI CCGC 1 cut(s) 690
AclI AACGTT 2 cut(s) 450, 1967
AclWI GGATC 6 cut(s) 379, 547, 1045, 1419, 1432, 1853
AcsI RAATTY 4 cut(s) 466, 605, 1170, 1983
AcuI CTGAAG 3 cut(s) 104, 1086, 1233
AcyI GRCGYC 1 cut(s) 1557
AfaI GTAC 6 cut(s) 111, 162, 458, 515, 1260, 1907
AfiI CCNNNNNNNGG 5 cut(s) 685, 689, 830, 1592, 1764
AflIII ACRYGT 1 cut(s) 1745
AjnI CCWGG 5 cut(s) 202, 311, 1195, 1540, 1763
AjuI GAANNNNNNNTTGG 2 cut(s) 712, 744
Alw26I GTCTC 3 cut(s) 617, 923, 1759
AlwI GGATC 6 cut(s) 379, 547, 1045, 1419, 1432, 1853
AlwNI CAGNNNCTG 2 cut(s) 989, 1187
Ama87I CYCGRG 1 cut(s) 870
AoxI GGCC 3 cut(s) 768, 997, 1365
ApeKI GCWGC 5 cut(s) 473, 948, 1349, 1352, 1991
ApoI RAATTY 4 cut(s) 466, 605, 1170, 1983
ArsI GACNNNNNNTTYG 2 cut(s) 791, 823
Asp700I GAANNNNTTC 2 cut(s) 1292, 1458
AspS9I GGNCC 3 cut(s) 705, 1366, 1869
AsuC2I CCSGG 1 cut(s) 1488
AsuHPI GGTGA 5 cut(s) 429, 813, 1298, 1515, 1616
AsuNHI GCTAGC 1 cut(s) 338
AvaI CYCGRG 1 cut(s) 870
AvaII GGWCC 2 cut(s) 705, 1869
BamHI GGATCC 1 cut(s) 1424
BarI GAAGNNNNNNTAC 2 cut(s) 102, 134
BbsI GAAGAC 4 cut(s) 14, 158, 726, 1272
BbvI GCAGC 5 cut(s) 460, 960, 1336, 1339, 1978
BccI CCATC 7 cut(s) 140, 872, 1213, 1216, 1436, 1799, 1846
BciT130I CCWGG 5 cut(s) 204, 313, 1197, 1542, 1765
BciVI GTATCC 1 cut(s) 772
BcnI CCSGG 1 cut(s) 1488
BcoDI GTCTC 3 cut(s) 617, 923, 1759
BfaI CTAG 5 cut(s) 339, 359, 848, 1385, 1614
BfmI CTRYAG 3 cut(s) 30, 1341, 1693
BfuAI ACCTGC 1 cut(s) 1940
BfuI GTATCC 1 cut(s) 772
BglII AGATCT 1 cut(s) 973
BisI GCNGC 5 cut(s) 474, 949, 1350, 1353, 1992
BlsI GCNGC 5 cut(s) 475, 950, 1351, 1354, 1993
Bme1390I CCNGG 6 cut(s) 204, 313, 1197, 1488, 1542, 1765
Bme18I GGWCC 2 cut(s) 705, 1869
BmeT110I CYCGRG 1 cut(s) 870
BmgT120I GGNCC 3 cut(s) 705, 1366, 1869
BmiI GGNNCC 2 cut(s) 225, 1426
BmrFI CCNGG 6 cut(s) 204, 313, 1197, 1488, 1542, 1765
BmrI ACTGGG 2 cut(s) 424, 1891
BmsI GCATC 8 cut(s) 485, 492, 794, 850, 976, 1114, 1163, 1725
BmtI GCTAGC 1 cut(s) 342
BmuI ACTGGG 2 cut(s) 424, 1891
BpiI GAAGAC 4 cut(s) 14, 158, 726, 1272
BpmI CTGGAG 1 cut(s) 201
Bpu10I CCTNAGC 2 cut(s) 1001, 1140
BpuEI CTTGAG 1 cut(s) 408
BpuMI CCSGG 1 cut(s) 1488
BsaHI GRCGYC 1 cut(s) 1557
BsaJI CCNNGG 6 cut(s) 312, 774, 943, 1195, 1564, 1591
BsaWI WCCGGW 1 cut(s) 923
Bsc4I CCNNNNNNNGG 5 cut(s) 685, 689, 830, 1592, 1764
Bse1I ACTGG 6 cut(s) 430, 591, 752, 1125, 1862, 1886
Bse3DI GCAATG 1 cut(s) 12
BseBI CCWGG 5 cut(s) 204, 313, 1197, 1542, 1765
BseDI CCNNGG 6 cut(s) 312, 774, 943, 1195, 1564, 1591
BseGI GGATG 7 cut(s) 197, 1129, 1208, 1380, 1428, 1560, 1857
BseLI CCNNNNNNNGG 5 cut(s) 685, 689, 830, 1592, 1764
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 4 cut(s) 1154, 1256, 1686, 1935
BseNI ACTGG 6 cut(s) 430, 591, 752, 1125, 1862, 1886
BseRI GAGGAG 1 cut(s) 1324
BseXI GCAGC 5 cut(s) 460, 960, 1336, 1339, 1978
BsgI GTGCAG 1 cut(s) 834
BshFI GGCC 3 cut(s) 770, 999, 1367
BsiHKCI CYCGRG 1 cut(s) 870
BsiSI CCGG 2 cut(s) 924, 1487
BslFI GGGAC 2 cut(s) 24, 1898
BslI CCNNNNNNNGG 5 cut(s) 685, 689, 830, 1592, 1764
BsmAI GTCTC 3 cut(s) 617, 923, 1759
BsmFI GGGAC 2 cut(s) 24, 1898
BsmI GAATGC 1 cut(s) 979
BsnI GGCC 3 cut(s) 770, 999, 1367
BsoBI CYCGRG 1 cut(s) 870
Bsp1407I TGTACA 1 cut(s) 1905
Bsp143I GATC 6 cut(s) 371, 552, 973, 1037, 1424, 1858
Bsp19I CCATGG 1 cut(s) 774
BspACI CCGC 1 cut(s) 690
BspANI GGCC 3 cut(s) 770, 999, 1367
BspCNI CTCAG 4 cut(s) 1153, 1255, 1685, 1934
BspHI TCATGA 1 cut(s) 1227
BspLI GGNNCC 2 cut(s) 225, 1426
BspMI ACCTGC 1 cut(s) 1940
BspOI GCTAGC 1 cut(s) 342
BspPI GGATC 6 cut(s) 379, 547, 1045, 1419, 1432, 1853
BspQI GCTCTTC 2 cut(s) 849, 1449
BsrDI GCAATG 1 cut(s) 12
BsrGI TGTACA 1 cut(s) 1905
BsrI ACTGG 6 cut(s) 430, 591, 752, 1125, 1862, 1886
BssECI CCNNGG 6 cut(s) 312, 774, 943, 1195, 1564, 1591
BssMI GATC 6 cut(s) 371, 552, 973, 1037, 1424, 1858
BssNI GRCGYC 1 cut(s) 1557
BssT1I CCWWGG 3 cut(s) 774, 943, 1591
Bst2UI CCWGG 5 cut(s) 204, 313, 1197, 1542, 1765
Bst4CI ACNGT 4 cut(s) 766, 1024, 1912, 1960
Bst6I CTCTTC 3 cut(s) 72, 849, 1449
BstACI GRCGYC 1 cut(s) 1557
BstAPI GCANNNNNTGC 2 cut(s) 860, 1187
BstAUI TGTACA 1 cut(s) 1905
BstC8I GCNNGC 3 cut(s) 340, 997, 1555
BstDEI CTNAG 6 cut(s) 1001, 1140, 1242, 1672, 1921, 1995
BstDSI CCRYGG 1 cut(s) 774
BstEII GGTNACC 1 cut(s) 938
BstF5I GGATG 7 cut(s) 197, 1129, 1208, 1380, 1428, 1560, 1857
BstKTI GATC 6 cut(s) 374, 555, 976, 1040, 1427, 1861
BstMAI GTCTC 3 cut(s) 617, 923, 1759
BstMBI GATC 6 cut(s) 371, 552, 973, 1037, 1424, 1858
BstMWI GCNNNNNNNGC 4 cut(s) 339, 860, 1187, 1497
BstNI CCWGG 5 cut(s) 204, 313, 1197, 1542, 1765
BstNSI RCATGY 2 cut(s) 1749, 1904
BstPI GGTNACC 1 cut(s) 938
BstSCI CCNGG 6 cut(s) 202, 311, 1195, 1486, 1540, 1763
BstSFI CTRYAG 3 cut(s) 30, 1341, 1693
BstV1I GCAGC 5 cut(s) 460, 960, 1336, 1339, 1978
BstV2I GAAGAC 4 cut(s) 14, 158, 726, 1272
BstX2I RGATCY 5 cut(s) 371, 552, 973, 1037, 1424
BstYI RGATCY 5 cut(s) 371, 552, 973, 1037, 1424
BsuI GTATCC 1 cut(s) 772
BsuRI GGCC 3 cut(s) 770, 999, 1367
BtgI CCRYGG 1 cut(s) 774
BtsCI GGATG 7 cut(s) 197, 1129, 1208, 1380, 1428, 1560, 1857
BtsIMutI CAGTG 4 cut(s) 598, 730, 1118, 1869
BveI ACCTGC 1 cut(s) 1940
Cac8I GCNNGC 3 cut(s) 340, 997, 1555
CaiI CAGNNNCTG 2 cut(s) 989, 1187
CciI TCATGA 1 cut(s) 1227
Cfr13I GGNCC 3 cut(s) 705, 1366, 1869
CseI GACGC 1 cut(s) 1546
CsiI ACCWGGT 1 cut(s) 1763
Csp6I GTAC 6 cut(s) 110, 161, 457, 514, 1259, 1906
CspCI CAANNNNNGTGG 2 cut(s) 331, 366
CviQI GTAC 6 cut(s) 110, 161, 457, 514, 1259, 1906
DdeI CTNAG 6 cut(s) 1001, 1140, 1242, 1672, 1921, 1995
DpnI GATC 6 cut(s) 373, 554, 975, 1039, 1426, 1860
DpnII GATC 6 cut(s) 371, 552, 973, 1037, 1424, 1858
DraI TTTAAA 1 cut(s) 1131
DrdI GACNNNNNNGTC 2 cut(s) 18, 1937
DseDI GACNNNNNNGTC 2 cut(s) 18, 1937
Eam1104I CTCTTC 3 cut(s) 72, 849, 1449
EarI CTCTTC 3 cut(s) 72, 849, 1449
EciI GGCGGA 1 cut(s) 705
Eco130I CCWWGG 3 cut(s) 774, 943, 1591
Eco147I AGGCCT 1 cut(s) 999
Eco47I GGWCC 2 cut(s) 705, 1869
Eco57I CTGAAG 3 cut(s) 104, 1086, 1233
Eco88I CYCGRG 1 cut(s) 870
Eco91I GGTNACC 1 cut(s) 938
EcoO65I GGTNACC 1 cut(s) 938
EcoRI GAATTC 2 cut(s) 466, 605
EcoRII CCWGG 5 cut(s) 202, 311, 1195, 1540, 1763
EcoT14I CCWWGG 3 cut(s) 774, 943, 1591
ErhI CCWWGG 3 cut(s) 774, 943, 1591
FalI AAGNNNNNCTT 2 cut(s) 1084, 1116
FaqI GGGAC 2 cut(s) 24, 1898
Fnu4HI GCNGC 5 cut(s) 474, 949, 1350, 1353, 1992
FokI GGATG 7 cut(s) 204, 1136, 1195, 1367, 1415, 1547, 1864
Fsp4HI GCNGC 5 cut(s) 474, 949, 1350, 1353, 1992
FspBI CTAG 5 cut(s) 339, 359, 848, 1385, 1614
GluI GCNGC 5 cut(s) 474, 949, 1350, 1353, 1992
GsuI CTGGAG 1 cut(s) 201
HaeIII GGCC 3 cut(s) 770, 999, 1367
HapII CCGG 2 cut(s) 924, 1487
HgaI GACGC 1 cut(s) 1546
Hin1I GRCGYC 1 cut(s) 1557
HincII GTYRAC 1 cut(s) 321
HindII GTYRAC 1 cut(s) 321
HinfI GANTC 7 cut(s) 104, 365, 818, 1145, 1617, 1689, 1841
HpaII CCGG 2 cut(s) 924, 1487
HphI GGTGA 5 cut(s) 429, 813, 1298, 1515, 1616
Hpy166II GTNNAC 7 cut(s) 161, 321, 514, 1484, 1869, 1906, 1908
Hpy188I TCNGA 9 cut(s) 123, 526, 652, 921, 985, 1245, 1568, 1840, 1982
Hpy188III TCNNGA 7 cut(s) 180, 369, 407, 870, 1142, 1228, 1614
Hpy8I GTNNAC 7 cut(s) 161, 321, 514, 1484, 1869, 1906, 1908
Hpy99I CGWCG 1 cut(s) 1604
HpyAV CCTTC 5 cut(s) 71, 128, 1084, 1584, 1733
HpyCH4III ACNGT 4 cut(s) 766, 1024, 1912, 1960
HpyCH4IV ACGT 5 cut(s) 163, 246, 450, 1599, 1967
HpyF10VI GCNNNNNNNGC 4 cut(s) 339, 860, 1187, 1497
HpyF3I CTNAG 6 cut(s) 1001, 1140, 1242, 1672, 1921, 1995
HpySE526I ACGT 5 cut(s) 163, 246, 450, 1599, 1967
Hsp92I GRCGYC 1 cut(s) 1557
Kzo9I GATC 6 cut(s) 371, 552, 973, 1037, 1424, 1858
LguI GCTCTTC 2 cut(s) 849, 1449
LmnI GCTCC 3 cut(s) 229, 851, 1808
Lsp1109I GCAGC 5 cut(s) 460, 960, 1336, 1339, 1978
LweI GCATC 8 cut(s) 485, 492, 794, 850, 976, 1114, 1163, 1725
MabI ACCWGGT 1 cut(s) 1763
MaeI CTAG 5 cut(s) 339, 359, 848, 1385, 1614
MaeII ACGT 5 cut(s) 163, 246, 450, 1599, 1967
MaeIII GTNAC 8 cut(s) 280, 797, 938, 1105, 1304, 1391, 1595, 1960
MalI GATC 6 cut(s) 373, 554, 975, 1039, 1426, 1860
MboI GATC 6 cut(s) 371, 552, 973, 1037, 1424, 1858
MboII GAAGA 9 cut(s) 14, 59, 158, 311, 726, 836, 1092, 1277, 1466
MflI RGATCY 5 cut(s) 371, 552, 973, 1037, 1424
MlyI GAGTC 1 cut(s) 1698
MmeI TCCRAC 3 cut(s) 406, 762, 1024
MroXI GAANNNNTTC 2 cut(s) 1292, 1458
MseI TTAA 6 cut(s) 239, 249, 392, 1055, 1130, 1892
MslI CAYNNNNRTG 3 cut(s) 984, 1311, 1437
MspA1I CMGCKG 4 cut(s) 287, 473, 542, 1253
MspI CCGG 2 cut(s) 924, 1487
MspR9I CCNGG 6 cut(s) 204, 313, 1197, 1488, 1542, 1765
Mva1269I GAATGC 1 cut(s) 979
MvaI CCWGG 5 cut(s) 204, 313, 1197, 1542, 1765
MwoI GCNNNNNNNGC 4 cut(s) 339, 860, 1187, 1497
NciI CCSGG 1 cut(s) 1488
NcoI CCATGG 1 cut(s) 774
NdeII GATC 6 cut(s) 371, 552, 973, 1037, 1424, 1858
NheI GCTAGC 1 cut(s) 338
NlaIV GGNNCC 2 cut(s) 225, 1426
NmuCI GTSAC 4 cut(s) 797, 1304, 1391, 1960
NspI RCATGY 2 cut(s) 1749, 1904
PaeR7I CTCGAG 1 cut(s) 870
PagI TCATGA 1 cut(s) 1227
PceI AGGCCT 1 cut(s) 999
PciI ACATGT 1 cut(s) 1745
PciSI GCTCTTC 2 cut(s) 849, 1449
PctI GAATGC 1 cut(s) 979
PdmI GAANNNNTTC 2 cut(s) 1292, 1458
PfeI GAWTC 6 cut(s) 104, 365, 818, 1145, 1617, 1841
PflMI CCANNNNNTGG 1 cut(s) 830
PfoI TCCNGGA 1 cut(s) 202
PkrI GCNGC 5 cut(s) 475, 950, 1351, 1354, 1993
PleI GAGTC 1 cut(s) 1697
PpsI GAGTC 1 cut(s) 1697
PscI ACATGT 1 cut(s) 1745
PsiI TTATAA 1 cut(s) 501
Psp1406I AACGTT 2 cut(s) 450, 1967
Psp6I CCWGG 5 cut(s) 202, 311, 1195, 1540, 1763
PspEI GGTNACC 1 cut(s) 938
PspGI CCWGG 5 cut(s) 202, 311, 1195, 1540, 1763
PspN4I GGNNCC 2 cut(s) 225, 1426
PspPI GGNCC 3 cut(s) 705, 1366, 1869
PstNI CAGNNNCTG 2 cut(s) 989, 1187
PsuI RGATCY 5 cut(s) 371, 552, 973, 1037, 1424
PvuII CAGCTG 4 cut(s) 287, 473, 542, 1253
RsaI GTAC 6 cut(s) 111, 162, 458, 515, 1260, 1907
RsaNI GTAC 6 cut(s) 110, 161, 457, 514, 1259, 1906
RseI CAYNNNNRTG 3 cut(s) 984, 1311, 1437
SapI GCTCTTC 2 cut(s) 849, 1449
SaqAI TTAA 6 cut(s) 239, 249, 392, 1055, 1130, 1892
SatI GCNGC 5 cut(s) 474, 949, 1350, 1353, 1992
Sau3AI GATC 6 cut(s) 371, 552, 973, 1037, 1424, 1858
Sau96I GGNCC 3 cut(s) 705, 1366, 1869
SchI GAGTC 1 cut(s) 1698
ScrFI CCNGG 6 cut(s) 204, 313, 1197, 1488, 1542, 1765
SexAI ACCWGGT 1 cut(s) 1763
SfaNI GCATC 8 cut(s) 485, 492, 794, 850, 976, 1114, 1163, 1725
SfcI CTRYAG 3 cut(s) 30, 1341, 1693
Sfr274I CTCGAG 1 cut(s) 870
SinI GGWCC 2 cut(s) 705, 1869
SlaI CTCGAG 1 cut(s) 870
SmiMI CAYNNNNRTG 3 cut(s) 984, 1311, 1437
SmlI CTYRAG 2 cut(s) 423, 870
SmoI CTYRAG 2 cut(s) 423, 870
SseBI AGGCCT 1 cut(s) 999
SsiI CCGC 1 cut(s) 690
SspMI CTAG 5 cut(s) 339, 359, 848, 1385, 1614
StuI AGGCCT 1 cut(s) 999
StyD4I CCNGG 6 cut(s) 202, 311, 1195, 1486, 1540, 1763
StyI CCWWGG 3 cut(s) 774, 943, 1591
TaaI ACNGT 4 cut(s) 766, 1024, 1912, 1960
TaiI ACGT 5 cut(s) 166, 249, 453, 1602, 1970
TaqI TCGA 4 cut(s) 871, 1013, 1311, 1789
TaqII GACCGA 1 cut(s) 1886
TatI WGTACW 4 cut(s) 456, 513, 1258, 1905
TfiI GAWTC 6 cut(s) 104, 365, 818, 1145, 1617, 1841
Tru1I TTAA 6 cut(s) 239, 249, 392, 1055, 1130, 1892
Tru9I TTAA 6 cut(s) 239, 249, 392, 1055, 1130, 1892
TscAI CASTG 4 cut(s) 598, 730, 1125, 1869
TseFI GTSAC 4 cut(s) 797, 1304, 1391, 1960
TseI GCWGC 5 cut(s) 473, 948, 1349, 1352, 1991
Tsp45I GTSAC 4 cut(s) 797, 1304, 1391, 1960
TspDTI ATGAA 5 cut(s) 59, 306, 459, 587, 1216
TspGWI ACGGA 1 cut(s) 785
TspRI CASTG 4 cut(s) 598, 730, 1125, 1869
Van91I CCANNNNNTGG 1 cut(s) 830
VpaK11BI GGWCC 2 cut(s) 705, 1869
XapI RAATTY 4 cut(s) 466, 605, 1170, 1983
XbaI TCTAGA 1 cut(s) 1613
XceI RCATGY 2 cut(s) 1749, 1904
XhoI CTCGAG 1 cut(s) 870
XmnI GAANNNNTTC 2 cut(s) 1292, 1458
XspI CTAG 5 cut(s) 339, 359, 848, 1385, 1614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.