Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0012086

Physical Location & Seq

Genomic Coordinates Reverse (-)

37167378 .. 37179711

Gene Structure 12334 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG301700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGCCGCCAAATTCCTTCAACTGCTTTTGCTCTTGAGTTTTCAGCTTCATCTATCTTTCTCCGGACAGACTAGCATGATGGAGTCAGTTCCTGATCTCCAGAGTTCCATGTACATGACGATTGATGGATATCCTTGTGTTCGACTACTCAATCTTTCTGGGGAGATTGGTTGTTCAAATCCTGGAAGAGAGAAGGTTGTTGCTCCAATTATAAGACTAAATAATGCTAATGATCTCACTCAGTTATCTGCAGTTCTGCTTTCAGTGGATGAAATTGAAAGTTTTTTTGCCAGAATATCGAAGGATACGACCTTCGCTAGCAATATAGCTGGTGTCTTGGTAGAATCAGGGCCTGAGATTCAAAATAAGTTAAAAGGGTTCTCTCCAGCTCTGAAGTTCCCACAATCAGATTTTGCTCCTTACAGAAGCATCAACTACGAATGGAACCCGATTGGATCTGGTATAATGTGGAACACGTATAACTTTCCTGTATTCTTACTCTCCCAGAGTAGCACATTGACCCTGCAGGAGGCTGCCTTAAACAATGAGAAGAGCAAAAAATCTTATACTGCTGATGTGGCTGAGTTTGATTTAGTGATGCAGACAATGAAAGCTGGCACTCATGATTCAAAATCTTGTTTAGAGGAAAATACTTGCCTTCCTTTAGGTGGATACAGTGTTTGGTCATCGCTTCCCCCGATCAATATTTCATCATCAGAGCAGTCCAAGCCCATTATACTTGCAGTAGCATCAATGGATTCAGCATCATTTTTTCGTGATAAAAACCTTGGTGCTGACTCCCCAATATCTGGACTGATTTCATTGCTGGCAGCAGTTGATGCACTTTCGAAGGGGAATATTGTGGATGACTTTAATAAACAGCTTGTATTTATTGTTTTCACCGGAGAGGCCTGGGGTTACCTTGGTAGCAGGAGATTTTTGCTGGAACTGGATCTGCAGTCTGATGCTGTTAGTGGCCTTAATTACTCATTGATTGAGAGGGTTGTCGAAATAGGTTCCATTGGGAAGGTCCTGAGCCAAGAAGCAAAGAACTTTTTTGTTCATACAGCTGGGACTTCCTCTGCCACAAATGAGACATTGGATGCTTTGAGGATTGCCCAAGATTCAGTCAAGTCTGACCACATTGTCGTCTTGTCTGCAAATGCTTCAAATCCTGGGATACCTCCATCTTCCTTGATGGCTTTTCTGGGAAAGGGCTCTCTAACCTCTGGGGTTGTATTGGAAGACTTTGATACTGTCTTTACCAACAAGTTCTACCAGAGTCACCTTGATGATCTATCAAATATAAACTCTTCAGCTATTGTGGCAGCTGCTTCCCTTGTAGCACGCACCCTTTACATTCTTGCCAGTGGCAATAACAATACAAGCAGTTCGGCTTTAACGTCTATCAATGTGAATGTTTCACTGGTCAAAGAACTAATGGGTTGCCTATTGGACTGTGAGCCAGGTCTTTCTTGTGAGCTGGTTAAAAATTATATAACACCAGCGAATACCTGCCCCAGCAATTATGTTGGCGTTATCATTGATGAACCTTCATCCACCCCGTATGTTGGATATGTTAGTGATATTTCAAGGTTTGTTTGGAACTTCCTGGCTGAAAAAACTTCTATTTCAAAGGAAAATGCTACCTCTGTCTGTTCTAAAGATTGCAGCAATGATGGTAGAGTCTGCATTAGAGCAGAGACAGATGGAAAGGGTGTTTGTGTTGTCTCCACAACCAGATACGTTCCAGCTTACTCAACAAGGTTGAAATTTGAATCTGGATCCTGGACTGTATTGCCTCCAAATAACTCTGATCCCATGGGGCTGTTGGATGCCGTTTGGACAGAAAGTAACTGGAATACAATTGGGCTCCGAGTCTATACTGTCCAAAATTCTTCTTTCGATAATATTGTTTTACTTGGGAGCATCGCCATTACAGTCTTGGCTTACCTCGCAATAGTGATCACAAGGGCCTTTTTAACAAAGGCTTTAAAGCGTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0010467 GO:0016020 GO:0016021 GO:0016485 GO:0016787 GO:0019538 GO:0031224 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0051604 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04330 ko05010 map04330 map05010

Pfam Domains

Protein Families

Nicastrin

Protein Analysis

668

Amino Acids

72.24

Weight (kDa)

4.94

Isoelectric Point (pI)

38.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ncstrn_small	PF18266	45 - 202	6.2e-44	Nicastrin small lobe
Peptidase_M28	PF04389	243 - 450	5.9e-06	Peptidase family M28
Nicastrin	PF05450	244 - 453	1.4e-71	Nicastrin large lobe

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52640 AT3G52640 AT3G52640
fragaria_vesca	FvH4_1g30060
malus_domestica	MD17G1267200.v1.1
prunus_persica	Prupe.3G165300_v2.0.a1 Prupe.3G165300_v2.0.a1
pyrus_communis	pycom17g26630
rosa_chinensis	RchiOBHm_Chr3g0492061
rosa_laevigata	RLG00000022797
rosa_multiflora	Rmu_sc0003846.1_g000020 Rmu_sc0042516.1_g000001
rosa_roxburghii	Rroxscaffold_6G00392600
rosa_rugosa	Rorug03G0251500
rosa_samantha	Rh3AG301700 Rh3BG337500 Rh3CG335000 Rh3DG337100
rosa_wichuraiana	Rw3G026630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	212
AasI	GACNNNNNNGTC	1 cut(s)	1145
Acc36I	ACCTGC	1 cut(s)	1523
AccB7I	CCANNNNNTGG	1 cut(s)	809
AccIII	TCCGGA	1 cut(s)	62
AciI	CCGC	1 cut(s)	6
AclWI	GGATC	5 cut(s)	463, 960, 1779, 1792, 1811
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	11, 1772, 1894
AcuI	CTGAAG	2 cut(s)	413, 1299
AfaI	GTAC	1 cut(s)	113
AfiI	CCNNNNNNNGG	4 cut(s)	529, 668, 809, 1571
AflIII	ACRYGT	1 cut(s)	474
AjnI	CCWGG	6 cut(s)	181, 911, 1174, 1465, 1611, 1787
Alw26I	GTCTC	3 cut(s)	1088, 1697, 1735
AlwI	GGATC	5 cut(s)	463, 960, 1779, 1792, 1811
AlwNI	CAGNNNCTG	2 cut(s)	92, 353
Aor13HI	TCCGGA	1 cut(s)	62
AoxI	GGCC	5 cut(s)	3, 350, 909, 976, 1974
ApeKI	GCWGC	5 cut(s)	533, 830, 1328, 1331, 1671
ApoI	RAATTY	3 cut(s)	11, 1772, 1894
AspS9I	GGNCC	3 cut(s)	350, 1030, 1974
AsuHPI	GGTGA	2 cut(s)	892, 1277
AsuII	TTCGAA	1 cut(s)	848
AsuNHI	GCTAGC	1 cut(s)	317
AvaII	GGWCC	1 cut(s)	1030
BamHI	GGATCC	1 cut(s)	1784
BanII	GRGCYC	2 cut(s)	1220, 1875
BbsI	GAAGAC	1 cut(s)	1251
BbvI	GCAGC	5 cut(s)	520, 842, 1318, 1340, 1683
BccI	CCATC	6 cut(s)	73, 119, 1192, 1195, 1673, 1703
BceAI	ACGGC	1 cut(s)	1823
BciT130I	CCWGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
BciVI	GTATCC	3 cut(s)	298, 665, 1173
BclI	TGATCA	1 cut(s)	1965
BcoDI	GTCTC	3 cut(s)	1088, 1697, 1735
BfaI	CTAG	2 cut(s)	72, 318
BfmI	CTRYAG	3 cut(s)	249, 524, 956
BfuAI	ACCTGC	1 cut(s)	1523
BfuI	GTATCC	3 cut(s)	298, 665, 1173
BisI	GCNGC	6 cut(s)	6, 534, 831, 1329, 1332, 1672
BlsI	GCNGC	6 cut(s)	7, 535, 832, 1330, 1333, 1673
Bme1390I	CCNGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
Bme18I	GGWCC	1 cut(s)	1030
BmgT120I	GGNCC	3 cut(s)	350, 1030, 1974
BmiI	GGNNCC	4 cut(s)	446, 1018, 1786, 1874
BmrFI	CCNGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
BmsI	GCATC	9 cut(s)	438, 588, 758, 773, 829, 955, 1093, 1825, 1938
BmtI	GCTAGC	1 cut(s)	321
BpiI	GAAGAC	1 cut(s)	1251
BpmI	CTGGAG	2 cut(s)	83, 369
Bpu10I	CCTNAGC	1 cut(s)	1034
Bpu14I	TTCGAA	1 cut(s)	848
BpuEI	CTTGAG	1 cut(s)	55
BsaAI	YACGTR	1 cut(s)	477
BsaBI	GATNNNNATC	1 cut(s)	129
BsaJI	CCNNGG	5 cut(s)	787, 912, 922, 1175, 1821
BsaWI	WCCGGW	2 cut(s)	62, 902
Bsc4I	CCNNNNNNNGG	4 cut(s)	529, 668, 809, 1571
Bse1I	ACTGG	4 cut(s)	954, 1368, 1431, 1862
Bse3DI	GCAATG	2 cut(s)	821, 1681
Bse8I	GATNNNNATC	1 cut(s)	129
BseAI	TCCGGA	1 cut(s)	62
BseBI	CCWGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
BseDI	CCNNGG	5 cut(s)	787, 912, 922, 1175, 1821
BseGI	GGATG	5 cut(s)	274, 871, 1108, 1556, 1840
BseJI	GATNNNNATC	1 cut(s)	129
BseLI	CCNNNNNNNGG	4 cut(s)	529, 668, 809, 1571
BseMI	GCAATG	2 cut(s)	821, 1681
BseMII	CTCAG	4 cut(s)	254, 345, 573, 1025
BseNI	ACTGG	4 cut(s)	954, 1368, 1431, 1862
BseXI	GCAGC	5 cut(s)	520, 842, 1318, 1340, 1683
BseYI	CCCAGC	2 cut(s)	1070, 1520
BshFI	GGCC	5 cut(s)	5, 352, 911, 978, 1976
BsiSI	CCGG	2 cut(s)	63, 903
BslFI	GGGAC	1 cut(s)	1087
BslI	CCNNNNNNNGG	4 cut(s)	529, 668, 809, 1571
BsmAI	GTCTC	3 cut(s)	1088, 1697, 1735
BsmFI	GGGAC	1 cut(s)	1087
BsnI	GGCC	5 cut(s)	5, 352, 911, 978, 1976
Bsp119I	TTCGAA	1 cut(s)	848
Bsp1286I	GDGCHC	2 cut(s)	1220, 1875
Bsp13I	TCCGGA	1 cut(s)	62
Bsp1407I	TGTACA	1 cut(s)	111
Bsp143I	GATC	9 cut(s)	94, 232, 455, 699, 952, 1294, 1784, 1816, 1965
Bsp19I	CCATGG	1 cut(s)	1821
BspACI	CCGC	1 cut(s)	6
BspANI	GGCC	5 cut(s)	5, 352, 911, 978, 1976
BspCNI	CTCAG	4 cut(s)	253, 346, 574, 1026
BspEI	TCCGGA	1 cut(s)	62
BspHI	TCATGA	1 cut(s)	622
BspLI	GGNNCC	4 cut(s)	446, 1018, 1786, 1874
BspMAI	CTGCAG	3 cut(s)	253, 528, 960
BspMI	ACCTGC	1 cut(s)	1523
BspOI	GCTAGC	1 cut(s)	321
BspPI	GGATC	5 cut(s)	463, 960, 1779, 1792, 1811
BspQI	GCTCTTC	1 cut(s)	545
BspT104I	TTCGAA	1 cut(s)	848
BsrDI	GCAATG	2 cut(s)	821, 1681
BsrGI	TGTACA	1 cut(s)	111
BsrI	ACTGG	4 cut(s)	954, 1368, 1431, 1862
BssECI	CCNNGG	5 cut(s)	787, 912, 922, 1175, 1821
BssMI	GATC	9 cut(s)	94, 232, 455, 699, 952, 1294, 1784, 1816, 1965
BssT1I	CCWWGG	3 cut(s)	787, 922, 1821
Bst2UI	CCWGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
Bst4CI	ACNGT	6 cut(s)	677, 1258, 1460, 1795, 1888, 1942
Bst6I	CTCTTC	3 cut(s)	181, 545, 1318
BstAPI	GCANNNNNTGC	1 cut(s)	839
BstAUI	TGTACA	1 cut(s)	111
BstBAI	YACGTR	1 cut(s)	477
BstBI	TTCGAA	1 cut(s)	848
BstC8I	GCNNGC	4 cut(s)	319, 616, 828, 1348
BstDEI	CTNAG	4 cut(s)	240, 354, 582, 1034
BstDSI	CCRYGG	1 cut(s)	1821
BstEII	GGTNACC	1 cut(s)	917
BstENI	CCTNNNNNAGG	1 cut(s)	527
BstF5I	GGATG	5 cut(s)	274, 871, 1108, 1556, 1840
BstKTI	GATC	9 cut(s)	97, 235, 458, 702, 955, 1297, 1787, 1819, 1968
BstMAI	GTCTC	3 cut(s)	1088, 1697, 1735
BstMBI	GATC	9 cut(s)	94, 232, 455, 699, 952, 1294, 1784, 1816, 1965
BstMWI	GCNNNNNNNGC	5 cut(s)	578, 727, 839, 1325, 1955
BstNI	CCWGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
BstPI	GGTNACC	1 cut(s)	917
BstSCI	CCNGG	6 cut(s)	181, 911, 1174, 1465, 1611, 1787
BstSFI	CTRYAG	3 cut(s)	249, 524, 956
BstV1I	GCAGC	5 cut(s)	520, 842, 1318, 1340, 1683
BstV2I	GAAGAC	1 cut(s)	1251
BstX2I	RGATCY	3 cut(s)	455, 952, 1784
BstYI	RGATCY	3 cut(s)	455, 952, 1784
BsuI	GTATCC	3 cut(s)	298, 665, 1173
BsuRI	GGCC	5 cut(s)	5, 352, 911, 978, 1976
BtgI	CCRYGG	1 cut(s)	1821
BtgZI	GCGATG	2 cut(s)	672, 1915
BtsCI	GGATG	5 cut(s)	274, 871, 1108, 1556, 1840
BtsIMutI	CAGTG	4 cut(s)	270, 682, 1375, 1424
BveI	ACCTGC	1 cut(s)	1523
Cac8I	GCNNGC	4 cut(s)	319, 616, 828, 1348
CaiI	CAGNNNCTG	2 cut(s)	92, 353
CciI	TCATGA	1 cut(s)	622
Cfr13I	GGNCC	3 cut(s)	350, 1030, 1974
Csp6I	GTAC	1 cut(s)	112
CviAII	CATG	5 cut(s)	76, 109, 115, 623, 1822
CviQI	GTAC	1 cut(s)	112
DdeI	CTNAG	4 cut(s)	240, 354, 582, 1034
DpnI	GATC	9 cut(s)	96, 234, 457, 701, 954, 1296, 1786, 1818, 1967
DpnII	GATC	9 cut(s)	94, 232, 455, 699, 952, 1294, 1784, 1816, 1965
DraI	TTTAAA	1 cut(s)	1995
DrdI	GACNNNNNNGTC	1 cut(s)	1145
DseDI	GACNNNNNNGTC	1 cut(s)	1145
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	3 cut(s)	181, 545, 1318
EarI	CTCTTC	3 cut(s)	181, 545, 1318
Eco130I	CCWWGG	3 cut(s)	787, 922, 1821
Eco147I	AGGCCT	1 cut(s)	911
Eco24I	GRGCYC	2 cut(s)	1220, 1875
Eco32I	GATATC	1 cut(s)	131
Eco47I	GGWCC	1 cut(s)	1030
Eco57I	CTGAAG	2 cut(s)	413, 1299
Eco91I	GGTNACC	1 cut(s)	917
EcoNI	CCTNNNNNAGG	1 cut(s)	527
EcoO109I	RGGNCCY	3 cut(s)	350, 1030, 1974
EcoO65I	GGTNACC	1 cut(s)	917
EcoRII	CCWGG	6 cut(s)	181, 911, 1174, 1465, 1611, 1787
EcoRV	GATATC	1 cut(s)	131
EcoT14I	CCWWGG	3 cut(s)	787, 922, 1821
EcoT38I	GRGCYC	2 cut(s)	1220, 1875
ErhI	CCWWGG	3 cut(s)	787, 922, 1821
FaeI	CATG	5 cut(s)	79, 112, 118, 626, 1825
FaqI	GGGAC	1 cut(s)	1087
FatI	CATG	5 cut(s)	75, 108, 114, 622, 1821
FbaI	TGATCA	1 cut(s)	1965
Fnu4HI	GCNGC	6 cut(s)	6, 534, 831, 1329, 1332, 1672
FokI	GGATG	5 cut(s)	281, 878, 1115, 1543, 1847
FriOI	GRGCYC	2 cut(s)	1220, 1875
Fsp4HI	GCNGC	6 cut(s)	6, 534, 831, 1329, 1332, 1672
FspBI	CTAG	2 cut(s)	72, 318
GluI	GCNGC	6 cut(s)	6, 534, 831, 1329, 1332, 1672
GsaI	CCCAGC	2 cut(s)	1074, 1524
GsuI	CTGGAG	2 cut(s)	83, 369
HaeIII	GGCC	5 cut(s)	5, 352, 911, 978, 1976
HapII	CCGG	2 cut(s)	63, 903
Hin1II	CATG	5 cut(s)	79, 112, 118, 626, 1825
HpaII	CCGG	2 cut(s)	63, 903
HphI	GGTGA	2 cut(s)	892, 1277
Hpy188I	TCNGA	7 cut(s)	393, 409, 718, 964, 1138, 1816, 1877
Hpy188III	TCNNGA	9 cut(s)	34, 63, 92, 100, 623, 776, 810, 1033, 1782
HpyAV	CCTTC	8 cut(s)	26, 187, 295, 322, 668, 844, 1021, 1563
HpyCH4III	ACNGT	6 cut(s)	677, 1258, 1460, 1795, 1888, 1942
HpyCH4IV	ACGT	3 cut(s)	476, 1403, 1746
HpyCH4V	TGCA	9 cut(s)	251, 526, 601, 743, 842, 958, 1160, 1671, 1692
HpyF10VI	GCNNNNNNNGC	5 cut(s)	578, 727, 839, 1325, 1955
HpyF3I	CTNAG	4 cut(s)	240, 354, 582, 1034
HpySE526I	ACGT	3 cut(s)	476, 1403, 1746
Hsp92II	CATG	5 cut(s)	79, 112, 118, 626, 1825
Kpn2I	TCCGGA	1 cut(s)	62
Ksp22I	TGATCA	1 cut(s)	1965
Kzo9I	GATC	9 cut(s)	94, 232, 455, 699, 952, 1294, 1784, 1816, 1965
LguI	GCTCTTC	1 cut(s)	545
LmnI	GCTCC	4 cut(s)	208, 421, 1878, 1926
Lsp1109I	GCAGC	5 cut(s)	520, 842, 1318, 1340, 1683
LweI	GCATC	9 cut(s)	438, 588, 758, 773, 829, 955, 1093, 1825, 1938
MaeI	CTAG	2 cut(s)	72, 318
MaeII	ACGT	3 cut(s)	476, 1403, 1746
MaeIII	GTNAC	4 cut(s)	917, 1283, 1853, 2000
MalI	GATC	9 cut(s)	96, 234, 457, 701, 954, 1296, 1786, 1818, 1967
MboI	GATC	9 cut(s)	94, 232, 455, 699, 952, 1294, 1784, 1816, 1965
MboII	GAAGA	6 cut(s)	198, 562, 1182, 1256, 1305, 1890
MfeI	CAATTG	1 cut(s)	1866
MflI	RGATCY	3 cut(s)	455, 952, 1784
MhlI	GDGCHC	2 cut(s)	1220, 1875
MluCI	AATT	9 cut(s)	11, 207, 273, 982, 1492, 1525, 1772, 1866, 1894
MlyI	GAGTC	5 cut(s)	92, 791, 1291, 1695, 1887
MmeI	TCCRAC	2 cut(s)	1552, 1812
MroI	TCCGGA	1 cut(s)	62
MseI	TTAA	8 cut(s)	371, 539, 873, 981, 1400, 1488, 1982, 1994
MslI	CAYNNNNRTG	2 cut(s)	113, 1290
MspA1I	CMGCKG	2 cut(s)	1070, 1331
MspI	CCGG	2 cut(s)	63, 903
MspR9I	CCNGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
MunI	CAATTG	1 cut(s)	1866
MvaI	CCWGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
MwoI	GCNNNNNNNGC	5 cut(s)	578, 727, 839, 1325, 1955
NcoI	CCATGG	1 cut(s)	1821
NdeII	GATC	9 cut(s)	94, 232, 455, 699, 952, 1294, 1784, 1816, 1965
NheI	GCTAGC	1 cut(s)	317
NlaIII	CATG	5 cut(s)	79, 112, 118, 626, 1825
NlaIV	GGNNCC	4 cut(s)	446, 1018, 1786, 1874
NmuCI	GTSAC	2 cut(s)	1283, 2000
NspV	TTCGAA	1 cut(s)	848
PagI	TCATGA	1 cut(s)	622
PceI	AGGCCT	1 cut(s)	911
PciSI	GCTCTTC	1 cut(s)	545
PcsI	WCGNNNNNNNCGW	3 cut(s)	305, 695, 1400
PfeI	GAWTC	6 cut(s)	344, 358, 626, 758, 1124, 1778
PflMI	CCANNNNNTGG	1 cut(s)	809
PfoI	TCCNGGA	2 cut(s)	181, 1787
PkrI	GCNGC	6 cut(s)	7, 535, 832, 1330, 1333, 1673
PleI	GAGTC	5 cut(s)	91, 791, 1290, 1694, 1886
PpsI	GAGTC	5 cut(s)	91, 791, 1290, 1694, 1886
Ppu21I	YACGTR	1 cut(s)	477
PpuMI	RGGWCCY	1 cut(s)	1030
PsiI	TTATAA	1 cut(s)	212
Psp5II	RGGWCCY	1 cut(s)	1030
Psp6I	CCWGG	6 cut(s)	181, 911, 1174, 1465, 1611, 1787
PspEI	GGTNACC	1 cut(s)	917
PspFI	CCCAGC	2 cut(s)	1070, 1520
PspGI	CCWGG	6 cut(s)	181, 911, 1174, 1465, 1611, 1787
PspN4I	GGNNCC	4 cut(s)	446, 1018, 1786, 1874
PspPI	GGNCC	3 cut(s)	350, 1030, 1974
PspPPI	RGGWCCY	1 cut(s)	1030
PstI	CTGCAG	3 cut(s)	253, 528, 960
PstNI	CAGNNNCTG	2 cut(s)	92, 353
PsuI	RGATCY	3 cut(s)	455, 952, 1784
PvuII	CAGCTG	2 cut(s)	1070, 1331
RsaI	GTAC	1 cut(s)	113
RsaNI	GTAC	1 cut(s)	112
RseI	CAYNNNNRTG	2 cut(s)	113, 1290
SapI	GCTCTTC	1 cut(s)	545
SaqAI	TTAA	8 cut(s)	371, 539, 873, 981, 1400, 1488, 1982, 1994
SatI	GCNGC	6 cut(s)	6, 534, 831, 1329, 1332, 1672
Sau3AI	GATC	9 cut(s)	94, 232, 455, 699, 952, 1294, 1784, 1816, 1965
Sau96I	GGNCC	3 cut(s)	350, 1030, 1974
SbfI	CCTGCAGG	1 cut(s)	528
SchI	GAGTC	5 cut(s)	92, 791, 1291, 1695, 1887
ScrFI	CCNGG	6 cut(s)	183, 913, 1176, 1467, 1613, 1789
SdaI	CCTGCAGG	1 cut(s)	528
SduI	GDGCHC	2 cut(s)	1220, 1875
SfaNI	GCATC	9 cut(s)	438, 588, 758, 773, 829, 955, 1093, 1825, 1938
SfcI	CTRYAG	3 cut(s)	249, 524, 956
SfuI	TTCGAA	1 cut(s)	848
SinI	GGWCC	1 cut(s)	1030
SmiMI	CAYNNNNRTG	2 cut(s)	113, 1290
SmlI	CTYRAG	1 cut(s)	34
SmoI	CTYRAG	1 cut(s)	34
Sse8387I	CCTGCAGG	1 cut(s)	528
Sse9I	AATT	9 cut(s)	11, 207, 273, 982, 1492, 1525, 1772, 1866, 1894
SseBI	AGGCCT	1 cut(s)	911
SsiI	CCGC	1 cut(s)	6
SspI	AATATT	3 cut(s)	706, 859, 1912
SspMI	CTAG	2 cut(s)	72, 318
StuI	AGGCCT	1 cut(s)	911
StyD4I	CCNGG	6 cut(s)	181, 911, 1174, 1465, 1611, 1787
StyI	CCWWGG	3 cut(s)	787, 922, 1821
TaaI	ACNGT	6 cut(s)	677, 1258, 1460, 1795, 1888, 1942
TaiI	ACGT	3 cut(s)	479, 1406, 1749
TaqI	TCGA	5 cut(s)	142, 299, 848, 1008, 1905
TasI	AATT	9 cut(s)	11, 207, 273, 982, 1492, 1525, 1772, 1866, 1894
TatI	WGTACW	1 cut(s)	111
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	6 cut(s)	344, 358, 626, 758, 1124, 1778
Tru1I	TTAA	8 cut(s)	371, 539, 873, 981, 1400, 1488, 1982, 1994
Tru9I	TTAA	8 cut(s)	371, 539, 873, 981, 1400, 1488, 1982, 1994
TscAI	CASTG	4 cut(s)	270, 682, 1375, 1431
TseFI	GTSAC	2 cut(s)	1283, 2000
TseI	GCWGC	5 cut(s)	533, 830, 1328, 1331, 1671
Tsp45I	GTSAC	2 cut(s)	1283, 2000
TspDTI	ATGAA	8 cut(s)	38, 285, 623, 699, 810, 1052, 1545, 1563
TspRI	CASTG	4 cut(s)	270, 682, 1375, 1431
Van91I	CCANNNNNTGG	1 cut(s)	809
VpaK11BI	GGWCC	1 cut(s)	1030
XagI	CCTNNNNNAGG	1 cut(s)	527
XapI	RAATTY	3 cut(s)	11, 1772, 1894
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1828, 1942
XspI	CTAG	2 cut(s)	72, 318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.