AT3G53360

Pentatricopeptide repeat domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0014545
Physical Location & Seq
Forward (+)
19783849 .. 19786808
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G53360.1

Sequence Viewer

Length: 2307 bp
ATGGCGACAATGTTACGGTTGGGAGCTAGAGTTTCCGTCAGCAACAGTCAGATACTGGCAACATCAAGTGTTGTATCAACCATCAAGACCGAAGAATTAATGAATGATCACATTAATTCCCTATGTAAAAGTAATTTCTACCGGGAAGCATTGGAAGCGTTTGATTTTGCGCAGAAGAACTCAAGCTTCAAGATAAGGTTAAGAACCTACATCTCTTTAATTTGTGCTTGCTCTTCATCGAGATCTCTAGCACAAGGCAGAAAGATACATGATCACATTTTGAATTCCAACTGCAAGTATGATACTATTCTTAATAATCACATTCTAAGTATGTATGGAAAATGTGGCTCGCTGAGGGATGCCAGAGAGGTTTTTGATTTTATGCCTGAAAGGAATTTGGTCTCTTACACATCTGTCATTACTGGCTATTCACAGAACGGTCAGGGAGCCGAGGCTATCAGATTATACTTGAAAATGCTTCAGGAAGATTTAGTTCCTGACCAGTTTGCATTTGGAAGCATTATCAAAGCATGTGCCAGTAGTAGTGATGTTGGGTTAGGGAAGCAACTGCATGCTCAAGTCATTAAGTTGGAATCCAGTTCTCATCTTATTGCTCAAAATGCTCTGATTGCTATGTATGTTCGCTTCAATCAAATGTCAGATGCTAGCAGAGTGTTTTATGGTATCCCAATGAAGGATCTAATTTCGTGGAGTTCAATCATTGCAGGGTTCTCGCAACTTGGGTTTGAGTTTGAAGCCCTGAGCCACCTAAAAGAAATGTTGTCTTTTGGTGTTTTCCATCCAAATGAATATATATTTGGTAGTTCTTTAAAAGCTTGTAGCAGTCTCCTTAGACCAGATTATGGAAGCCAAATACATGGGTTATGCATTAAGTCGGAGTTAGCTGGAAACGCAATTGCAGGCTGTTCGCTCTGTGACATGTATGCTAGATGCGGTTTCCTGAATTCTGCAAGGAGAGTGTTTGATCAGATAGAAAGACCCGATACAGCATCATGGAATGTGATCATTGCTGGACTTGCAAATAATGGTTACGCTGATGAGGCTGTATCAGTTTTCTCTCAGATGAGGAGTTCTGGTTTTATTCCTGATGCCATCTCCTTGCGTTCTTTGCTTTGTGCTCAGACAAAACCAATGGCTTTGTCTCAAGGAATGCAAATTCACTCTTACATTATCAAGTGGGGTTTCCTGGCAGATCTTACGGTTTGCAACTCTCTGCTTACCATGTACACCTTCTGCTCAGACTTGTATTGTTGTTTTAATTTATTTGAAGATTTCAGAAACAACGCAGATTCTGTTTCTTGGAATACTATTCTGACGGCTTGTTTGCAACACGAACAGCCAGTAGAGATGTTGAGATTGTTTAAGCTGATGCTTGTGTCTGAATGTGAGCCAGATCACATAACTATGGGTAATCTGTTGCGGGGTTGTGTGGAAATCTCATCTCTAAAGTTGGGAAGCCAAGTCCATTGCTATAGTTTGAAAACCGGGTTGGCGCCTGAGCAATTTATAAAAAATGGACTGATTGATATGTATGCCAAGTGTGGATCACTGGGGCAAGCGAGAAGGATTTTTGATTCAATGGATAACAGAGATGTAGTTTCGTGGAGCACCTTGATAGTTGGATATGCACAGTCTGGATTTGGAGAGGAAGCTCTCATATTGTTCAAGGAAATGAAAAGTGCGGGCATAGAGCCAAATCATGTAACTTTTGTCGGTGTTCTTACTGCCTGTAGTCATGTTGGGCTGGTGGAAGAAGGCTTGAAACTGTATGCGACCATGCAAACTGAACACGGGATTTCACCAACAAAAGAGCACTGCTCTTGCGTGGTGGACTTACTGGCTCGTGCTGGCCGTTTAAATGAAGCTGAGAGATTCATCGATGAAATGAAGTTGGAACCTGATGTTGTCGTGTGGAAGACTCTACTGTCTGCATGTAAAACCCAAGGAAATGTTCATCTCGCCCAAAAAGCTGCTGAAAATATTCTGAAAATCGATCCTTTCAACTCTACAGCTCATGTATTGCTCTGCAGCATGCATGCTTCTTCTGGAAATTGGGAAAATGCTGCATTGTTGAGGAGCTCAATGAAAAAGCATGATGTTAAAAAAATTCCAGGACAGAGCTGGATCGAAATTGAGGACAAAATTCATATATTCTTTGCTGAGGATATTTTTCATCCAGAGAGGGACGATATATATACAGTCCTGCACAACATCTGGTCGCAGATGCTAGATGAGTGTAATCCGCAACACAAGAAAAGACTCCAGTTTATCCATGAAACCGGATAA

Protein Analysis

768

Amino Acids

85.67

Weight (kDa)

6.3

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 132 - 179 9.5e-10 PPR repeat family
PPR PF01535 134 - 163 8.2e-06 PPR repeat
PPR_2 PF13041 334 - 378 3.1e-09 PPR repeat family
PPR PF01535 338 - 367 1.2e-06 PPR repeat
PPR_2 PF13041 437 - 484 3.9e-09 PPR repeat family
PPR_2 PF13041 537 - 585 8.5e-12 PPR repeat family
PPR PF01535 540 - 570 3.7e-08 PPR repeat
E_motif PF20431 657 - 717 1.2e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014545)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G53360 AT3G53360
fragaria_vesca FvH4_6g15460
malus_domestica MD04G1103100.v1.1 MD12G1123300.v1.1
prunus_persica Prupe.6G239900_v2.0.a1
pyrus_communis pycom04g09820 pycom12g12200
rosa_chinensis RchiOBHm_Chr3g0468941
rosa_laevigata RLG00000024398
rosa_multiflora Rmu_co8434945.1_g000001
rosa_roxburghii Rroxscaffold_6G00412440
rosa_rugosa Rorug03G0097700
rosa_samantha Rh3AG147500 Rh3BG170100 Rh3DG205100
rosa_wichuraiana Rw3G013870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1529
AasI GACNNNNNNGTC 1 cut(s) 1945
Acc16I TGCGCA 1 cut(s) 171
AccB1I GGYRCC 1 cut(s) 1513
AccB7I CCANNNNNTGG 1 cut(s) 863
AciI CCGC 4 cut(s) 954, 1441, 1703, 2264
AclWI GGATC 4 cut(s) 705, 1573, 2009, 2153
AcoI YGGCCR 1 cut(s) 1870
AcsI RAATTY 6 cut(s) 283, 394, 964, 1176, 2127, 2163
AcuI CTGAAG 1 cut(s) 464
AcyI GRCGYC 1 cut(s) 1514
AfaI GTAC 1 cut(s) 1247
AfiI CCNNNNNNNGG 2 cut(s) 694, 863
AflIII ACRYGT 1 cut(s) 939
AjnI CCWGG 2 cut(s) 1206, 2131
AjuI GAANNNNNNNTTGG 6 cut(s) 801, 833, 1493, 1525, 1956, 1988
Alw21I GWGCWC 4 cut(s) 1141, 1631, 1836, 2102
Alw26I GTCTC 3 cut(s) 406, 851, 1167
AlwI GGATC 4 cut(s) 705, 1573, 2009, 2153
AlwNI CAGNNNCTG 2 cut(s) 55, 1313
AoxI GGCC 1 cut(s) 1870
ApeKI GCWGC 3 cut(s) 1991, 2049, 2084
ApoI RAATTY 6 cut(s) 283, 394, 964, 1176, 2127, 2163
ArsI GACNNNNNNTTYG 2 cut(s) 1327, 1359
AseI ATTAAT 2 cut(s) 98, 114
Asp700I GAANNNNTTC 1 cut(s) 2001
AspLEI GCGC 2 cut(s) 172, 1516
AsuC2I CCSGG 2 cut(s) 143, 1507
AsuHPI GGTGA 1 cut(s) 1812
AsuNHI GCTAGC 1 cut(s) 665
BanI GGYRCC 1 cut(s) 1513
BanII GRGCYC 1 cut(s) 2102
BarI GAAGNNNNNNTAC 2 cut(s) 629, 661
BauI CACGAG 1 cut(s) 1863
BbsI GAAGAC 1 cut(s) 1943
Bbv12I GWGCWC 4 cut(s) 1141, 1631, 1836, 2102
BbvCI CCTCAGC 2 cut(s) 353, 2181
BbvI GCAGC 3 cut(s) 1978, 2061, 2071
BccI CCATC 3 cut(s) 89, 807, 1121
BceAI ACGGC 2 cut(s) 1353, 1857
BcgI CGANNNNNNTGC 4 cut(s) 714, 748, 909, 943
BciT130I CCWGG 2 cut(s) 1208, 2133
BciVI GTATCC 1 cut(s) 695
BclI TGATCA 4 cut(s) 106, 271, 985, 1023
BcnI CCSGG 2 cut(s) 143, 1507
BcoDI GTCTC 3 cut(s) 406, 851, 1167
BfaI CTAG 5 cut(s) 27, 248, 666, 948, 2249
BfmI CTRYAG 4 cut(s) 1492, 1750, 2028, 2047
BfoI RGCGCY 1 cut(s) 1517
BfuI GTATCC 1 cut(s) 695
BglII AGATCT 2 cut(s) 242, 1213
BisI GCNGC 3 cut(s) 1992, 2050, 2085
BlsI GCNGC 3 cut(s) 1993, 2051, 2086
Bme1390I CCNGG 4 cut(s) 143, 1208, 1507, 2133
BmiI GGNNCC 3 cut(s) 448, 1515, 1917
BmrFI CCNGG 4 cut(s) 143, 1208, 1507, 2133
BmrI ACTGGG 1 cut(s) 1580
BmsI GCATC 7 cut(s) 349, 652, 941, 1019, 1099, 1380, 2235
BmtI GCTAGC 1 cut(s) 669
BmuI ACTGGG 1 cut(s) 1580
BpiI GAAGAC 1 cut(s) 1943
BplI GAGNNNNNCTC 2 cut(s) 1823, 1855
BpmI CTGGAG 1 cut(s) 2267
Bpu10I CCTNAGC 4 cut(s) 353, 761, 1518, 2181
BpuEI CTTGAG 3 cut(s) 166, 561, 1149
BpuMI CCSGG 2 cut(s) 143, 1507
Bsa29I ATCGAT 2 cut(s) 1899, 2013
BsaHI GRCGYC 1 cut(s) 1514
BsaI GGTCTC 1 cut(s) 406
BsaJI CCNNGG 2 cut(s) 450, 1963
BsaWI WCCGGW 1 cut(s) 2300
BsaXI ACNNNNNCTCC 4 cut(s) 15, 45, 1081, 1111
Bsc4I CCNNNNNNNGG 2 cut(s) 694, 863
Bse1I ACTGG 9 cut(s) 60, 427, 502, 537, 597, 1361, 1575, 1863, 2284
Bse3DI GCAATG 3 cut(s) 720, 1026, 1486
BseBI CCWGG 2 cut(s) 1208, 2133
BseCI ATCGAT 2 cut(s) 1899, 2013
BseDI CCNNGG 2 cut(s) 450, 1963
BseGI GGATG 3 cut(s) 364, 799, 2194
BseLI CCNNNNNNNGG 2 cut(s) 694, 863
BseMI GCAATG 3 cut(s) 720, 1026, 1486
BseMII CTCAG 8 cut(s) 344, 752, 1094, 1154, 1272, 1509, 1878, 2172
BseNI ACTGG 9 cut(s) 60, 427, 502, 537, 597, 1361, 1575, 1863, 2284
BseRI GAGGAG 2 cut(s) 1102, 2110
BseXI GCAGC 3 cut(s) 1978, 2061, 2071
BsgI GTGCAG 1 cut(s) 2210
BshFI GGCC 1 cut(s) 1872
BshNI GGYRCC 1 cut(s) 1513
BshVI ATCGAT 2 cut(s) 1899, 2013
BsiHKAI GWGCWC 4 cut(s) 1141, 1631, 1836, 2102
BsiSI CCGG 3 cut(s) 142, 1506, 2301
BslFI GGGAC 1 cut(s) 2219
BslI CCNNNNNNNGG 2 cut(s) 694, 863
BsmAI GTCTC 3 cut(s) 406, 851, 1167
BsmFI GGGAC 1 cut(s) 2219
BsmI GAATGC 1 cut(s) 1176
BsnI GGCC 1 cut(s) 1872
Bso31I GGTCTC 1 cut(s) 406
Bsp1286I GDGCHC 4 cut(s) 1141, 1631, 1836, 2102
Bsp1407I TGTACA 1 cut(s) 1245
BspACI CCGC 4 cut(s) 954, 1441, 1703, 2264
BspANI GGCC 1 cut(s) 1872
BspCNI CTCAG 8 cut(s) 345, 753, 1093, 1153, 1271, 1510, 1879, 2173
BspDI ATCGAT 2 cut(s) 1899, 2013
BspLI GGNNCC 3 cut(s) 448, 1515, 1917
BspMAI CTGCAG 1 cut(s) 2051
BspOI GCTAGC 1 cut(s) 669
BspPI GGATC 4 cut(s) 705, 1573, 2009, 2153
BspQI GCTCTTC 1 cut(s) 238
BspT107I GGYRCC 1 cut(s) 1513
BspTNI GGTCTC 1 cut(s) 406
BsrDI GCAATG 3 cut(s) 720, 1026, 1486
BsrGI TGTACA 1 cut(s) 1245
BsrI ACTGG 9 cut(s) 60, 427, 502, 537, 597, 1361, 1575, 1863, 2284
BssECI CCNNGG 2 cut(s) 450, 1963
BssNI GRCGYC 1 cut(s) 1514
BssSI CACGAG 1 cut(s) 1863
BssT1I CCWWGG 1 cut(s) 1963
Bst2BI CACGAG 1 cut(s) 1863
Bst2UI CCWGG 2 cut(s) 1208, 2133
Bst4CI ACNGT 8 cut(s) 18, 47, 440, 1222, 1653, 1788, 1947, 2221
Bst6I CTCTTC 1 cut(s) 238
BstACI GRCGYC 1 cut(s) 1514
BstAUI TGTACA 1 cut(s) 1245
BstF5I GGATG 3 cut(s) 364, 799, 2194
BstH2I RGCGCY 1 cut(s) 1517
BstHHI GCGC 2 cut(s) 172, 1516
BstMAI GTCTC 3 cut(s) 406, 851, 1167
BstMWI GCNNNNNNNGC 8 cut(s) 155, 620, 629, 911, 1037, 1061, 1129, 1988
BstNI CCWGG 2 cut(s) 1208, 2133
BstNSI RCATGY 6 cut(s) 534, 575, 943, 1956, 2056, 2060
BstSCI CCNGG 4 cut(s) 141, 1206, 1505, 2131
BstSFI CTRYAG 4 cut(s) 1492, 1750, 2028, 2047
BstV1I GCAGC 3 cut(s) 1978, 2061, 2071
BstV2I GAAGAC 1 cut(s) 1943
BstX2I RGATCY 3 cut(s) 242, 697, 1213
BstXI CCANNNNNNTGG 1 cut(s) 878
BstYI RGATCY 3 cut(s) 242, 697, 1213
Bsu15I ATCGAT 2 cut(s) 1899, 2013
BsuI GTATCC 1 cut(s) 695
BsuRI GGCC 1 cut(s) 1872
BsuTUI ATCGAT 2 cut(s) 1899, 2013
BtsCI GGATG 3 cut(s) 364, 799, 2194
BtsI GCAGTG 1 cut(s) 1834
BtsIMutI CAGTG 2 cut(s) 1568, 1834
CaiI CAGNNNCTG 2 cut(s) 55, 1313
CfoI GCGC 2 cut(s) 172, 1516
ClaI ATCGAT 2 cut(s) 1899, 2013
Csp6I GTAC 1 cut(s) 1246
CviQI GTAC 1 cut(s) 1246
DinI GGCGCC 1 cut(s) 1515
DraI TTTAAA 2 cut(s) 831, 1878
DrdI GACNNNNNNGTC 1 cut(s) 1945
DseDI GACNNNNNNGTC 1 cut(s) 1945
EaeI YGGCCR 1 cut(s) 1870
Eam1104I CTCTTC 1 cut(s) 238
EarI CTCTTC 1 cut(s) 238
Ecl136II GAGCTC 1 cut(s) 2100
Eco130I CCWWGG 1 cut(s) 1963
Eco24I GRGCYC 1 cut(s) 2102
Eco31I GGTCTC 1 cut(s) 406
Eco53kI GAGCTC 1 cut(s) 2100
Eco57I CTGAAG 1 cut(s) 464
EcoICRI GAGCTC 1 cut(s) 2100
EcoRI GAATTC 2 cut(s) 283, 964
EcoRII CCWGG 2 cut(s) 1206, 2131
EcoT14I CCWWGG 1 cut(s) 1963
EcoT22I ATGCAT 2 cut(s) 890, 2058
EcoT38I GRGCYC 1 cut(s) 2102
EgeI GGCGCC 1 cut(s) 1515
EheI GGCGCC 1 cut(s) 1515
ErhI CCWWGG 1 cut(s) 1963
FaqI GGGAC 1 cut(s) 2219
FauI CCCGC 2 cut(s) 1434, 1696
FbaI TGATCA 4 cut(s) 106, 271, 985, 1023
Fnu4HI GCNGC 3 cut(s) 1992, 2050, 2085
FokI GGATG 3 cut(s) 371, 786, 2181
FriOI GRGCYC 1 cut(s) 2102
Fsp4HI GCNGC 3 cut(s) 1992, 2050, 2085
FspBI CTAG 5 cut(s) 27, 248, 666, 948, 2249
FspI TGCGCA 1 cut(s) 171
GlaI GCGC 2 cut(s) 171, 1515
GluI GCNGC 3 cut(s) 1992, 2050, 2085
GsuI CTGGAG 1 cut(s) 2267
HaeII RGCGCY 1 cut(s) 1517
HaeIII GGCC 1 cut(s) 1872
HapII CCGG 3 cut(s) 142, 1506, 2301
HhaI GCGC 2 cut(s) 172, 1516
Hin1I GRCGYC 1 cut(s) 1514
Hin6I GCGC 2 cut(s) 170, 1514
HinP1I GCGC 2 cut(s) 170, 1514
HindIII AAGCTT 2 cut(s) 184, 834
HinfI GANTC 6 cut(s) 593, 1310, 1595, 1893, 1939, 2280
HpaII CCGG 3 cut(s) 142, 1506, 2301
HphI GGTGA 1 cut(s) 1812
Hpy166II GTNNAC 2 cut(s) 1248, 1852
Hpy8I GTNNAC 2 cut(s) 1248, 1852
HpyAV CCTTC 4 cut(s) 688, 1261, 1578, 1769
HpyCH4III ACNGT 8 cut(s) 18, 47, 440, 1222, 1653, 1788, 1947, 2221
HpyF10VI GCNNNNNNNGC 8 cut(s) 155, 620, 629, 911, 1037, 1061, 1129, 1988
Hsp92I GRCGYC 1 cut(s) 1514
HspAI GCGC 2 cut(s) 170, 1514
KasI GGCGCC 1 cut(s) 1513
Ksp22I TGATCA 4 cut(s) 106, 271, 985, 1023
LguI GCTCTTC 1 cut(s) 238
LmnI GCTCC 4 cut(s) 23, 446, 1626, 2097
Lsp1109I GCAGC 3 cut(s) 1978, 2061, 2071
LweI GCATC 7 cut(s) 349, 652, 941, 1019, 1099, 1380, 2235
MaeI CTAG 5 cut(s) 27, 248, 666, 948, 2249
MaeIII GTNAC 4 cut(s) 12, 935, 1049, 1723
MboII GAAGA 8 cut(s) 104, 187, 225, 497, 1301, 1784, 1948, 2055
MfeI CAATTG 1 cut(s) 915
MflI RGATCY 3 cut(s) 242, 697, 1213
MhlI GDGCHC 4 cut(s) 1141, 1631, 1836, 2102
Mly113I GGCGCC 1 cut(s) 1514
MlyI GAGTC 2 cut(s) 1933, 2274
MmeI TCCRAC 5 cut(s) 312, 570, 876, 1621, 1893
Mph1103I ATGCAT 2 cut(s) 890, 2058
MroXI GAANNNNTTC 1 cut(s) 2001
MslI CAYNNNNRTG 2 cut(s) 804, 1424
MspI CCGG 3 cut(s) 142, 1506, 2301
MspR9I CCNGG 4 cut(s) 143, 1208, 1507, 2133
MunI CAATTG 1 cut(s) 915
Mva1269I GAATGC 1 cut(s) 1176
MvaI CCWGG 2 cut(s) 1208, 2133
MwoI GCNNNNNNNGC 8 cut(s) 155, 620, 629, 911, 1037, 1061, 1129, 1988
NarI GGCGCC 1 cut(s) 1514
NciI CCSGG 2 cut(s) 143, 1507
NheI GCTAGC 1 cut(s) 665
NlaIV GGNNCC 3 cut(s) 448, 1515, 1917
NmeAIII GCCGAG 1 cut(s) 475
NmuCI GTSAC 1 cut(s) 935
NsbI TGCGCA 1 cut(s) 171
NsiI ATGCAT 2 cut(s) 890, 2058
NspI RCATGY 6 cut(s) 534, 575, 943, 1956, 2056, 2060
PaeI GCATGC 3 cut(s) 575, 2056, 2060
PciI ACATGT 1 cut(s) 939
PciSI GCTCTTC 1 cut(s) 238
PcsI WCGNNNNNNNCGW 1 cut(s) 1870
PctI GAATGC 1 cut(s) 1176
PdmI GAANNNNTTC 1 cut(s) 2001
PfeI GAWTC 4 cut(s) 593, 1310, 1595, 1893
PflMI CCANNNNNTGG 1 cut(s) 863
PfoI TCCNGGA 1 cut(s) 2131
PkrI GCNGC 3 cut(s) 1993, 2051, 2086
PleI GAGTC 2 cut(s) 1933, 2274
PluTI GGCGCC 1 cut(s) 1517
PpsI GAGTC 2 cut(s) 1933, 2274
PscI ACATGT 1 cut(s) 939
PshBI ATTAAT 2 cut(s) 98, 114
PsiI TTATAA 1 cut(s) 1529
Psp124BI GAGCTC 1 cut(s) 2102
Psp6I CCWGG 2 cut(s) 1206, 2131
PspGI CCWGG 2 cut(s) 1206, 2131
PspN4I GGNNCC 3 cut(s) 448, 1515, 1917
PstI CTGCAG 1 cut(s) 2051
PstNI CAGNNNCTG 2 cut(s) 55, 1313
PsuI RGATCY 3 cut(s) 242, 697, 1213
RsaI GTAC 1 cut(s) 1247
RsaNI GTAC 1 cut(s) 1246
RseI CAYNNNNRTG 2 cut(s) 804, 1424
SacI GAGCTC 1 cut(s) 2102
SapI GCTCTTC 1 cut(s) 238
SatI GCNGC 3 cut(s) 1992, 2050, 2085
SchI GAGTC 2 cut(s) 1933, 2274
ScrFI CCNGG 4 cut(s) 143, 1208, 1507, 2133
SduI GDGCHC 4 cut(s) 1141, 1631, 1836, 2102
SfaNI GCATC 7 cut(s) 349, 652, 941, 1019, 1099, 1380, 2235
SfcI CTRYAG 4 cut(s) 1492, 1750, 2028, 2047
SfoI GGCGCC 1 cut(s) 1515
SmiMI CAYNNNNRTG 2 cut(s) 804, 1424
SmlI CTYRAG 3 cut(s) 181, 576, 1164
SmoI CTYRAG 3 cut(s) 181, 576, 1164
SphI GCATGC 3 cut(s) 575, 2056, 2060
SsiI CCGC 4 cut(s) 954, 1441, 1703, 2264
SspDI GGCGCC 1 cut(s) 1513
SspI AATATT 1 cut(s) 2002
SspMI CTAG 5 cut(s) 27, 248, 666, 948, 2249
SstI GAGCTC 1 cut(s) 2102
StyD4I CCNGG 4 cut(s) 141, 1206, 1505, 2131
StyI CCWWGG 1 cut(s) 1963
TaaI ACNGT 8 cut(s) 18, 47, 440, 1222, 1653, 1788, 1947, 2221
TaqI TCGA 4 cut(s) 239, 1899, 2013, 2148
TaqII GACCGA 1 cut(s) 104
TatI WGTACW 1 cut(s) 1245
TfiI GAWTC 4 cut(s) 593, 1310, 1595, 1893
TscAI CASTG 2 cut(s) 1575, 1841
TseFI GTSAC 1 cut(s) 935
TseI GCWGC 3 cut(s) 1991, 2049, 2084
Tsp45I GTSAC 1 cut(s) 935
TspGWI ACGGA 1 cut(s) 25
TspRI CASTG 2 cut(s) 1575, 1841
Van91I CCANNNNNTGG 1 cut(s) 863
VspI ATTAAT 2 cut(s) 98, 114
XapI RAATTY 6 cut(s) 283, 394, 964, 1176, 2127, 2163
XceI RCATGY 6 cut(s) 534, 575, 943, 1956, 2056, 2060
XcmI CCANNNNNNNNNTGG 2 cut(s) 509, 2139
XmnI GAANNNNTTC 1 cut(s) 2001
XspI CTAG 5 cut(s) 27, 248, 666, 948, 2249
Zsp2I ATGCAT 2 cut(s) 890, 2058
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.