Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0014545

Physical Location & Seq

Genomic Coordinates Reverse (-)

14707749 .. 14710026

Gene Structure 2278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g12200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGAAAAGATTAAAATCCCCACTACCGTTGACATTCCATAAGAGTCAACCAAGTCAACCTCCATCTCTTTTACCAAACTTCAACAACGAACAGTTTAGCAACAACTACATAATCTCCTTGTGCAAGCAAAAGCTTTACAGAGAAGCCATTGAAGCATTTGAGTTTTTACAAGGTCAAACGAACTTCCCAATATTTCCCAGCACTTACACAAATTTGGTTTATGCTTGCTCGTCTTTGAGGTCTCTCGAATACGGCCGGAGAATCCATGGCCATATTTTGGCATCCAATTACCAGCCGGACATTGTTTTTCAGAATCATGTTCTCAACATGTATGGAAAATGTGGGTCGTTCGCGGAAGCACGCAAGGTTTTCGATGCAATGCCTGAAAGAAATGTTGTTTCTTGGACTTCACTGATTTCTGGGTACTCTCAGAATAGTCAAGAGGATAAAGCCATTGAATTGTATTTCCAAATGCTGAGGGCAGGTTGTGTTCCTGATCACTTCACCTTTGGAAGTGTCCTAAAAGCTTGTTCGGGTTTGCGGAATGAACTGCTGGGGAGACAGCTGCATGCCCATGTTGTTAAATCAGAAACTGGTTCTCACCCTATAGCACAGAATGCCCTTACTTCAATGTACGCGAAGTTCGGTCTGATTGCAGATGCTTTTGATGTCTTTTCTCGTGTTCCAACAAAGGACTTGATTTCTTGGGGTTCGATGATTGCAGGGTTTTCCCAGCTTGGTTATGAAAAAGAAGCTTTGGATCACTTCAAAGACATGCTCTTTCAGGGTGCTTACCGGCCGAATGAGTTTATATTTGGGAGTGCTTTCAGTGCGTGTGGAGGCCTTCTTGAACCTGAATATGGAAAGCAGATACATGGGATGTGCATAAAATTTGGTTTGGGGAGAGACATCTTTGCTGGATGCTCCCTTTGTGACATGTATGCAAAATGTGGGCAATTGGAATCTGCAAGAACAGTGTTTTATCAGATGGACAGGCCCGATTTAGTGTCCTGGAATGCAATTATATCCGGGTTTTCGAATGCTGGAGATTCTCATGAAGCATTATCATTCTTTTCTCAGATGCGGCATAAGGGACTGATCCCCGACGAAGTTAGTGTTCTTCCCATACTAACTGCTTGCACAAGCCCTTCAACACTCTATCAGGGTGAGCAGATCCACTCCTACATTATCAAGAGGGCCTTTGATTTTACCGTTATTGTATGCAACAGTTTGCTAACCATGTATGCTAAGTGTTCAAATCTCTATGATGCATTTCTTGTGTTTGAAGATATAAGAAATGACGCTGATTTAGTTACTTGGAATGCTATTATTAGTGCGTGCATGCAGCACAACCGGGCCGGGGAGGTTTTCAGATTACTAAATTTAATGCGTATTTCTGAAACTACGCCTGATCATATTACTTTGGGTAATTTGATTGGAGCATGTGCAAATATATCATCTTTAGAGGTTGGGAATCAGATTCATTGCTTTACTGTAAAAAGTGGGATTGTGCTTGATGTTACTGTCAGCAATGGATTAATTGACATGTATACAAAGTGTGGATCGATCTGGAAGTGCGCAAAAGCTCTTCGGCTGGATGGAGGATCCAGATGTTGTCTCGTGGAAATGACGGAATTGGGCATAAAACCCAATGAAGTTACACTGGTGGGTGTCCTTACTGCTTGCAGTCATATTGGACTGGTAGAAGAAGGATGGAAAATATATAAAACCATGGAATCCGAGCATGGGATTGTACCGACGATAGAGCATTGTTCTTGTATGGTTGACTTACTTGCTCGTTCCGGATGCTTACATGAAGCAGAGGCATTCATCAAGCAAATGGCATTTGAACCTGACGTTCTGGTATGGATGACTCTACTTGCTGCCTGCAGAACCCGTGGGAACGTTGAGATTGGAAAACGGGCAGCAGAGAATGTACTAAAATTAGATCCTTCCCATTCTGCTGCTCTCGTGCTGCTTTGCAACATCCATGCTTCTTCTGGCAATTGGGATGATGTTGCCAGGTTGAGGAACTTGATGAGAGAAAGGGACGTCAGGAAAGTCCCAGGGCAGAGCTGGATTGAGGTTAAGGATAGGGCCCATGTATTTTTTGTTGAAGATTGCCTGCATCCTGAGAGAGGTAAAATATATGCAATGCTAGAGGTGTTGTGGCTGCAGATGCTGGATGATGGTTATGACCCACTTCAGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

738

Amino Acids

82.37

Weight (kDa)

6.19

Isoelectric Point (pI)

44.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53360 AT3G53360
fragaria_vesca	FvH4_6g15460
malus_domestica	MD04G1103100.v1.1 MD12G1123300.v1.1
prunus_persica	Prupe.6G239900_v2.0.a1
pyrus_communis	pycom04g09820 pycom12g12200
rosa_chinensis	RchiOBHm_Chr3g0468941
rosa_laevigata	RLG00000024398
rosa_multiflora	Rmu_co8434945.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412440
rosa_rugosa	Rorug03G0097700
rosa_samantha	Rh3AG147500 Rh3BG170100 Rh3DG205100
rosa_wichuraiana	Rw3G013870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2055
Acc16I	TGCGCA	1 cut(s)	1579
Acc36I	ACCTGC	1 cut(s)	473
AccB7I	CCANNNNNTGG	1 cut(s)	277
AccI	GTMKAC	1 cut(s)	1550
AccII	CGCG	2 cut(s)	353, 638
AccIII	TCCGGA	1 cut(s)	1802
AciI	CCGC	3 cut(s)	353, 541, 1084
AclI	AACGTT	1 cut(s)	1905
AclWI	GGATC	7 cut(s)	768, 1093, 1168, 1570, 1599, 1612, 1943
AcoI	YGGCCR	3 cut(s)	253, 268, 797
AcsI	RAATTY	3 cut(s)	211, 890, 1381
AcuI	CTGAAG	1 cut(s)	2189
AcyI	GRCGYC	1 cut(s)	2052
AfaI	GTAC	4 cut(s)	425, 635, 1755, 1938
AfiI	CCNNNNNNNGG	7 cut(s)	277, 860, 1360, 1746, 2028, 2138, 2206
AflIII	ACRYGT	3 cut(s)	327, 936, 1545
AjnI	CCWGG	3 cut(s)	1010, 2021, 2065
AluBI	AGCT	7 cut(s)	133, 527, 565, 736, 755, 1586, 2076
AluI	AGCT	7 cut(s)	133, 527, 565, 736, 755, 1586, 2076
Alw26I	GTCTC	4 cut(s)	246, 553, 900, 1622
AlwI	GGATC	7 cut(s)	768, 1093, 1168, 1570, 1599, 1612, 1943
AlwNI	CAGNNNCTG	2 cut(s)	593, 2182
Aor13HI	TCCGGA	1 cut(s)	1802
AoxI	GGCC	8 cut(s)	253, 268, 797, 841, 995, 1197, 1356, 2097
ApaI	GGGCCC	1 cut(s)	2101
ApeKI	GCWGC	7 cut(s)	565, 1345, 1883, 1925, 1964, 1975, 2173
ApoI	RAATTY	3 cut(s)	211, 890, 1381
AseI	ATTAAT	1 cut(s)	1538
AspLEI	GCGC	1 cut(s)	1580
AspS9I	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
AsuC2I	CCSGG	3 cut(s)	1030, 1355, 1360
AsuHPI	GGTGA	3 cut(s)	496, 593, 1178
AsuII	TTCGAA	1 cut(s)	1037
BaeGI	GKGCMC	1 cut(s)	2101
BalI	TGGCCA	1 cut(s)	270
BamHI	GGATCC	1 cut(s)	1604
BanII	GRGCYC	1 cut(s)	2101
BauI	CACGAG	3 cut(s)	678, 1619, 1970
BbvCI	CCTCAGC	1 cut(s)	476
BbvI	GCAGC	7 cut(s)	552, 1357, 1870, 1937, 1951, 1962, 2160
BccI	CCATC	5 cut(s)	70, 982, 1592, 1707, 2183
BceAI	ACGGC	1 cut(s)	268
BcgI	CGANNNNNNTGC	2 cut(s)	352, 386
BciT130I	CCWGG	3 cut(s)	1012, 2023, 2067
BclI	TGATCA	2 cut(s)	496, 1411
BcnI	CCSGG	3 cut(s)	1030, 1355, 1360
BcoDI	GTCTC	4 cut(s)	246, 553, 900, 1622
BfaI	CTAG	1 cut(s)	2159
BfmI	CTRYAG	3 cut(s)	606, 1888, 2174
BfuAI	ACCTGC	1 cut(s)	473
BisI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
BlsI	GCNGC	8 cut(s)	567, 1086, 1347, 1885, 1927, 1966, 1977, 2175
Bme1390I	CCNGG	6 cut(s)	1012, 1030, 1355, 1360, 2023, 2067
BmgT120I	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
BmiI	GGNNCC	2 cut(s)	1606, 2099
BmrFI	CCNGG	6 cut(s)	1012, 1030, 1355, 1360, 2023, 2067
BmsI	GCATC	9 cut(s)	290, 364, 649, 911, 1071, 1258, 1796, 2137, 2169
BpmI	CTGGAG	1 cut(s)	1065
Bpu10I	CCTNAGC	1 cut(s)	476
Bpu14I	TTCGAA	1 cut(s)	1037
BpuMI	CCSGG	3 cut(s)	1030, 1355, 1360
Bsa29I	ATCGAT	1 cut(s)	1565
BsaBI	GATNNNNATC	1 cut(s)	13
BsaHI	GRCGYC	1 cut(s)	2052
BsaI	GGTCTC	1 cut(s)	246
BsaJI	CCNNGG	6 cut(s)	265, 1359, 1731, 1897, 2065, 2066
BsaWI	WCCGGW	1 cut(s)	1802
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bsc4I	CCNNNNNNNGG	7 cut(s)	277, 860, 1360, 1746, 2028, 2138, 2206
Bse118I	RCCGGY	1 cut(s)	795
Bse1I	ACTGG	3 cut(s)	598, 1668, 1704
Bse3DI	GCAATG	4 cut(s)	384, 1483, 1537, 2160
Bse8I	GATNNNNATC	1 cut(s)	13
BseAI	TCCGGA	1 cut(s)	1802
BseBI	CCWGG	3 cut(s)	1012, 2023, 2067
BseCI	ATCGAT	1 cut(s)	1565
BseDI	CCNNGG	6 cut(s)	265, 1359, 1731, 1897, 2065, 2066
BseJI	GATNNNNATC	1 cut(s)	13
BseLI	CCNNNNNNNGG	7 cut(s)	277, 860, 1360, 1746, 2028, 2138, 2206
BseMI	GCAATG	4 cut(s)	384, 1483, 1537, 2160
BseMII	CTCAG	4 cut(s)	443, 467, 1091, 2124
BseNI	ACTGG	3 cut(s)	598, 1668, 1704
BseSI	GKGCMC	1 cut(s)	2101
BseX3I	CGGCCG	2 cut(s)	253, 797
BseXI	GCAGC	7 cut(s)	552, 1357, 1870, 1937, 1951, 1962, 2160
BseYI	CCCAGC	3 cut(s)	197, 553, 732
Bsh1236I	CGCG	2 cut(s)	353, 638
Bsh1285I	CGRYCG	2 cut(s)	256, 800
BshFI	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
BshVI	ATCGAT	1 cut(s)	1565
BsiEI	CGRYCG	2 cut(s)	256, 800
BsiSI	CCGG	7 cut(s)	256, 296, 796, 1029, 1354, 1359, 1803
BslFI	GGGAC	3 cut(s)	1107, 2048, 2063
BslI	CCNNNNNNNGG	7 cut(s)	277, 860, 1360, 1746, 2028, 2138, 2206
BsmAI	GTCTC	4 cut(s)	246, 553, 900, 1622
BsmFI	GGGAC	3 cut(s)	1107, 2048, 2063
BsmI	GAATGC	5 cut(s)	622, 1021, 1045, 1327, 1826
BsnI	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
Bso31I	GGTCTC	1 cut(s)	246
Bsp119I	TTCGAA	1 cut(s)	1037
Bsp120I	GGGCCC	1 cut(s)	2097
Bsp1286I	GDGCHC	1 cut(s)	2101
Bsp13I	TCCGGA	1 cut(s)	1802
Bsp143I	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
Bsp19I	CCATGG	2 cut(s)	265, 1731
BspACI	CCGC	3 cut(s)	353, 541, 1084
BspANI	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
BspCNI	CTCAG	4 cut(s)	442, 468, 1090, 2125
BspDI	ATCGAT	1 cut(s)	1565
BspEI	TCCGGA	1 cut(s)	1802
BspFNI	CGCG	2 cut(s)	353, 638
BspHI	TCATGA	1 cut(s)	1054
BspLI	GGNNCC	2 cut(s)	1606, 2099
BspMAI	CTGCAG	2 cut(s)	1892, 2178
BspMI	ACCTGC	1 cut(s)	473
BspPI	GGATC	7 cut(s)	768, 1093, 1168, 1570, 1599, 1612, 1943
BspQI	GCTCTTC	1 cut(s)	1593
BspT104I	TTCGAA	1 cut(s)	1037
BspTNI	GGTCTC	1 cut(s)	246
BsrDI	GCAATG	4 cut(s)	384, 1483, 1537, 2160
BsrFI	RCCGGY	1 cut(s)	795
BsrI	ACTGG	3 cut(s)	598, 1668, 1704
BssAI	RCCGGY	1 cut(s)	795
BssECI	CCNNGG	6 cut(s)	265, 1359, 1731, 1897, 2065, 2066
BssMI	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
BssNAI	GTATAC	1 cut(s)	1551
BssNI	GRCGYC	1 cut(s)	2052
BssSI	CACGAG	3 cut(s)	678, 1619, 1970
BssT1I	CCWWGG	2 cut(s)	265, 1731
Bst1107I	GTATAC	1 cut(s)	1551
Bst2BI	CACGAG	3 cut(s)	678, 1619, 1970
Bst2UI	CCWGG	3 cut(s)	1012, 2023, 2067
Bst4CI	ACNGT	7 cut(s)	27, 93, 976, 1213, 1229, 1495, 1525
Bst6I	CTCTTC	1 cut(s)	1593
BstACI	GRCGYC	1 cut(s)	2052
BstAPI	GCANNNNNTGC	1 cut(s)	617
BstBI	TTCGAA	1 cut(s)	1037
BstDEI	CTNAG	5 cut(s)	429, 476, 1077, 1248, 2133
BstDSI	CCRYGG	3 cut(s)	265, 1731, 1897
BstENI	CCTNNNNNAGG	1 cut(s)	2136
BstFNI	CGCG	2 cut(s)	353, 638
BstHHI	GCGC	1 cut(s)	1580
BstKTI	GATC	9 cut(s)	499, 763, 1101, 1176, 1414, 1565, 1569, 1607, 1951
BstMAI	GTCTC	4 cut(s)	246, 553, 900, 1622
BstMBI	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
BstMCI	CGRYCG	2 cut(s)	256, 800
BstMWI	GCNNNNNNNGC	4 cut(s)	152, 617, 830, 2179
BstNI	CCWGG	3 cut(s)	1012, 2023, 2067
BstNSI	RCATGY	7 cut(s)	331, 572, 778, 940, 1345, 1446, 1549
BstSCI	CCNGG	6 cut(s)	1010, 1028, 1353, 1358, 2021, 2065
BstSFI	CTRYAG	3 cut(s)	606, 1888, 2174
BstSLI	GKGCMC	1 cut(s)	2101
BstUI	CGCG	2 cut(s)	353, 638
BstV1I	GCAGC	7 cut(s)	552, 1357, 1870, 1937, 1951, 1962, 2160
BstX2I	RGATCY	3 cut(s)	1173, 1604, 1948
BstYI	RGATCY	3 cut(s)	1173, 1604, 1948
BstZ17I	GTATAC	1 cut(s)	1551
BstZI	CGGCCG	2 cut(s)	253, 797
Bsu15I	ATCGAT	1 cut(s)	1565
BsuRI	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
BsuTUI	ATCGAT	1 cut(s)	1565
BtgI	CCRYGG	3 cut(s)	265, 1731, 1897
BtsIMutI	CAGTG	4 cut(s)	410, 835, 981, 1661
BveI	ACCTGC	1 cut(s)	473
CaiI	CAGNNNCTG	2 cut(s)	593, 2182
CciI	TCATGA	1 cut(s)	1054
CfoI	GCGC	1 cut(s)	1580
Cfr10I	RCCGGY	1 cut(s)	795
Cfr13I	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
ClaI	ATCGAT	1 cut(s)	1565
CseI	GACGC	1 cut(s)	1310
Csp6I	GTAC	4 cut(s)	424, 634, 1754, 1937
CspCI	CAANNNNNGTGG	2 cut(s)	9, 44
CviQI	GTAC	4 cut(s)	424, 634, 1754, 1937
DdeI	CTNAG	5 cut(s)	429, 476, 1077, 1248, 2133
DpnI	GATC	9 cut(s)	498, 762, 1100, 1175, 1413, 1564, 1568, 1606, 1950
DpnII	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
EaeI	YGGCCR	3 cut(s)	253, 268, 797
EagI	CGGCCG	2 cut(s)	253, 797
Eam1104I	CTCTTC	1 cut(s)	1593
EarI	CTCTTC	1 cut(s)	1593
EclXI	CGGCCG	2 cut(s)	253, 797
Eco130I	CCWWGG	2 cut(s)	265, 1731
Eco147I	AGGCCT	1 cut(s)	843
Eco24I	GRGCYC	1 cut(s)	2101
Eco31I	GGTCTC	1 cut(s)	246
Eco52I	CGGCCG	2 cut(s)	253, 797
Eco57I	CTGAAG	1 cut(s)	2189
EcoNI	CCTNNNNNAGG	1 cut(s)	2136
EcoO109I	RGGNCCY	2 cut(s)	1197, 2097
EcoRII	CCWGG	3 cut(s)	1010, 2021, 2065
EcoT14I	CCWWGG	2 cut(s)	265, 1731
EcoT22I	ATGCAT	1 cut(s)	1273
EcoT38I	GRGCYC	1 cut(s)	2101
ErhI	CCWWGG	2 cut(s)	265, 1731
FalI	AAGNNNNNCTT	2 cut(s)	1184, 1216
FaqI	GGGAC	3 cut(s)	1107, 2048, 2063
FbaI	TGATCA	2 cut(s)	496, 1411
FblI	GTMKAC	1 cut(s)	1550
Fnu4HI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
FriOI	GRGCYC	1 cut(s)	2101
Fsp4HI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
FspBI	CTAG	1 cut(s)	2159
FspI	TGCGCA	1 cut(s)	1579
GlaI	GCGC	1 cut(s)	1579
GluI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
GsaI	CCCAGC	3 cut(s)	201, 557, 736
GsuI	CTGGAG	1 cut(s)	1065
HaeIII	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
HapII	CCGG	7 cut(s)	256, 296, 796, 1029, 1354, 1359, 1803
HgaI	GACGC	1 cut(s)	1310
HhaI	GCGC	1 cut(s)	1580
Hin1I	GRCGYC	1 cut(s)	2052
Hin6I	GCGC	1 cut(s)	1578
HinP1I	GCGC	1 cut(s)	1578
HincII	GTYRAC	4 cut(s)	30, 47, 56, 1786
HindII	GTYRAC	4 cut(s)	30, 47, 56, 1786
HindIII	AAGCTT	3 cut(s)	131, 525, 753
HinfI	GANTC	9 cut(s)	43, 261, 313, 962, 1049, 1474, 1480, 1736, 1873
HpaII	CCGG	7 cut(s)	256, 296, 796, 1029, 1354, 1359, 1803
HphI	GGTGA	3 cut(s)	496, 593, 1178
Hpy166II	GTNNAC	5 cut(s)	30, 47, 56, 1551, 1786
Hpy8I	GTNNAC	5 cut(s)	30, 47, 56, 1551, 1786
Hpy99I	CGWCG	2 cut(s)	1109, 1762
HpyAV	CCTTC	4 cut(s)	854, 1158, 1703, 1962
HpyCH4III	ACNGT	7 cut(s)	27, 93, 976, 1213, 1229, 1495, 1525
HpyCH4IV	ACGT	3 cut(s)	1857, 1905, 2052
HpyF10VI	GCNNNNNNNGC	4 cut(s)	152, 617, 830, 2179
HpyF3I	CTNAG	5 cut(s)	429, 476, 1077, 1248, 2133
HpySE526I	ACGT	3 cut(s)	1857, 1905, 2052
Hsp92I	GRCGYC	1 cut(s)	2052
HspAI	GCGC	1 cut(s)	1578
Kpn2I	TCCGGA	1 cut(s)	1802
Ksp22I	TGATCA	2 cut(s)	496, 1411
Kzo9I	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
LguI	GCTCTTC	1 cut(s)	1593
LmnI	GCTCC	2 cut(s)	929, 1439
Lsp1109I	GCAGC	7 cut(s)	552, 1357, 1870, 1937, 1951, 1962, 2160
LweI	GCATC	9 cut(s)	290, 364, 649, 911, 1071, 1258, 1796, 2137, 2169
MaeI	CTAG	1 cut(s)	2159
MaeII	ACGT	3 cut(s)	1857, 1905, 2052
MaeIII	GTNAC	4 cut(s)	932, 1312, 1519, 1657
MalI	GATC	9 cut(s)	498, 762, 1100, 1175, 1413, 1564, 1568, 1606, 1950
MboI	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
MboII	GAAGA	6 cut(s)	1112, 1298, 1580, 1718, 1989, 2129
MfeI	CAATTG	2 cut(s)	956, 2005
MflI	RGATCY	3 cut(s)	1173, 1604, 1948
MhlI	GDGCHC	1 cut(s)	2101
MlsI	TGGCCA	1 cut(s)	270
MluNI	TGGCCA	1 cut(s)	270
MlyI	GAGTC	2 cut(s)	52, 1867
MmeI	TCCRAC	1 cut(s)	710
Mox20I	TGGCCA	1 cut(s)	270
Mph1103I	ATGCAT	1 cut(s)	1273
MroI	TCCGGA	1 cut(s)	1802
MscI	TGGCCA	1 cut(s)	270
MseI	TTAA	5 cut(s)	11, 582, 1385, 1538, 2088
MslI	CAYNNNNRTG	1 cut(s)	573
Msp20I	TGGCCA	1 cut(s)	270
MspA1I	CMGCKG	1 cut(s)	565
MspI	CCGG	7 cut(s)	256, 296, 796, 1029, 1354, 1359, 1803
MspR9I	CCNGG	6 cut(s)	1012, 1030, 1355, 1360, 2023, 2067
MunI	CAATTG	2 cut(s)	956, 2005
Mva1269I	GAATGC	5 cut(s)	622, 1021, 1045, 1327, 1826
MvaI	CCWGG	3 cut(s)	1012, 2023, 2067
MvnI	CGCG	2 cut(s)	353, 638
MwoI	GCNNNNNNNGC	4 cut(s)	152, 617, 830, 2179
NciI	CCSGG	3 cut(s)	1030, 1355, 1360
NcoI	CCATGG	2 cut(s)	265, 1731
NdeII	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
NlaIV	GGNNCC	2 cut(s)	1606, 2099
NmuCI	GTSAC	1 cut(s)	932
NsbI	TGCGCA	1 cut(s)	1579
NsiI	ATGCAT	1 cut(s)	1273
NspI	RCATGY	7 cut(s)	331, 572, 778, 940, 1345, 1446, 1549
NspV	TTCGAA	1 cut(s)	1037
PaeI	GCATGC	2 cut(s)	572, 1345
PagI	TCATGA	1 cut(s)	1054
PasI	CCCWGGG	1 cut(s)	2066
PceI	AGGCCT	1 cut(s)	843
PciI	ACATGT	3 cut(s)	327, 936, 1545
PciSI	GCTCTTC	1 cut(s)	1593
PctI	GAATGC	5 cut(s)	622, 1021, 1045, 1327, 1826
PfeI	GAWTC	7 cut(s)	261, 313, 962, 1049, 1474, 1480, 1736
PflMI	CCANNNNNTGG	1 cut(s)	277
PfoI	TCCNGGA	1 cut(s)	1010
PkrI	GCNGC	8 cut(s)	567, 1086, 1347, 1885, 1927, 1966, 1977, 2175
PleI	GAGTC	2 cut(s)	51, 1867
PpsI	GAGTC	2 cut(s)	51, 1867
PscI	ACATGT	3 cut(s)	327, 936, 1545
PshBI	ATTAAT	1 cut(s)	1538
Psp1406I	AACGTT	1 cut(s)	1905
Psp6I	CCWGG	3 cut(s)	1010, 2021, 2065
PspFI	CCCAGC	3 cut(s)	197, 553, 732
PspGI	CCWGG	3 cut(s)	1010, 2021, 2065
PspN4I	GGNNCC	2 cut(s)	1606, 2099
PspOMI	GGGCCC	1 cut(s)	2097
PspPI	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
PsrI	GAACNNNNNNTAC	2 cut(s)	626, 658
PstI	CTGCAG	2 cut(s)	1892, 2178
PstNI	CAGNNNCTG	2 cut(s)	593, 2182
PsuI	RGATCY	3 cut(s)	1173, 1604, 1948
PvuII	CAGCTG	1 cut(s)	565
RsaI	GTAC	4 cut(s)	425, 635, 1755, 1938
RsaNI	GTAC	4 cut(s)	424, 634, 1754, 1937
RseI	CAYNNNNRTG	1 cut(s)	573
SapI	GCTCTTC	1 cut(s)	1593
SaqAI	TTAA	5 cut(s)	11, 582, 1385, 1538, 2088
SatI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
Sau3AI	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
Sau96I	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
SchI	GAGTC	2 cut(s)	52, 1867
ScrFI	CCNGG	6 cut(s)	1012, 1030, 1355, 1360, 2023, 2067
SduI	GDGCHC	1 cut(s)	2101
SfaNI	GCATC	9 cut(s)	290, 364, 649, 911, 1071, 1258, 1796, 2137, 2169
SfcI	CTRYAG	3 cut(s)	606, 1888, 2174
SfuI	TTCGAA	1 cut(s)	1037
SmiMI	CAYNNNNRTG	1 cut(s)	573
SphI	GCATGC	2 cut(s)	572, 1345
SseBI	AGGCCT	1 cut(s)	843
SsiI	CCGC	3 cut(s)	353, 541, 1084
SspI	AATATT	1 cut(s)	192
SspMI	CTAG	1 cut(s)	2159
StuI	AGGCCT	1 cut(s)	843
StyD4I	CCNGG	6 cut(s)	1010, 1028, 1353, 1358, 2021, 2065
StyI	CCWWGG	2 cut(s)	265, 1731
TaaI	ACNGT	7 cut(s)	27, 93, 976, 1213, 1229, 1495, 1525
TaiI	ACGT	3 cut(s)	1860, 1908, 2055
TaqI	TCGA	5 cut(s)	246, 372, 713, 1037, 1565
TaqII	GACCGA	1 cut(s)	635
TatI	WGTACW	1 cut(s)	1936
TauI	GCSGC	1 cut(s)	1087
TfiI	GAWTC	7 cut(s)	261, 313, 962, 1049, 1474, 1480, 1736
Tru1I	TTAA	5 cut(s)	11, 582, 1385, 1538, 2088
Tru9I	TTAA	5 cut(s)	11, 582, 1385, 1538, 2088
TscAI	CASTG	4 cut(s)	417, 835, 981, 1668
TseFI	GTSAC	1 cut(s)	932
TseI	GCWGC	7 cut(s)	565, 1345, 1883, 1925, 1964, 1975, 2173
Tsp45I	GTSAC	1 cut(s)	932
TspDTI	ATGAA	8 cut(s)	17, 561, 759, 1071, 1472, 1668, 1819, 1830
TspGWI	ACGGA	1 cut(s)	1646
TspRI	CASTG	4 cut(s)	417, 835, 981, 1668
Van91I	CCANNNNNTGG	1 cut(s)	277
VspI	ATTAAT	1 cut(s)	1538
XagI	CCTNNNNNAGG	1 cut(s)	2136
XapI	RAATTY	3 cut(s)	211, 890, 1381
XceI	RCATGY	7 cut(s)	331, 572, 778, 940, 1345, 1446, 1549
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1997, 2073
XmiI	GTMKAC	1 cut(s)	1550
XspI	CTAG	1 cut(s)	2159
ZraI	GACGTC	1 cut(s)	2053
Zsp2I	ATGCAT	1 cut(s)	1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.