Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0014545

Physical Location & Seq

Genomic Coordinates Forward (+)

14578709 .. 14580514

Gene Structure 1806 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG170100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGCTTCGATCGGGTTGTAAGCCTGATCAGTTTACTTTCGGAAGCATAGTGAAAGCGTGCTCGGGTTTGGGGAATGTGTGGTTGGGGAGACAACTCCATGCCCATGTTGTGAAATCAGAAACTGGTTCACACCCTATTGCACAAAATGCGCTTACTTCAATGTACACAAAGTTTGGTCTGATTGCAGATGCATTTGATGTGTTCACGCGTGTTGCGATGAAGGATTTGATTTCTTGGGGTTCAATCATTGCAGGGTTTTCGCAACTTGGTTATGAGAAAGAAGCTTTGGCTCATTTTAAGGAAATGCTGTGTCAGGGTGCTCACACGCCGAATGAGTTTATATTTGGAAGTGCTTTTAGTGCGTGTAGCGGTCTTGTTCAACCGGAATATGGAAGGCAGATACATGGGATGTGCATAAAGTTTGGTTTAGGGAGAGACAATTTTGCTGGATGCTCCCTTTGTGACATGTATGCAAAGTGTGGACATTTAGAGTCTGCAAGAACTGTATTTTGTCACATAGACCGACCTGATTTGGTGTCCTGGAATGCAATGATCTCGGGGTGTTCTAGTGTTGGAGATGCCAATGAAGCGGTATCGTTCTTTTCTAGGATGCAGCATATGAGACTAATCCCCGATGAAGTTAGTGTTCTCTCTGTACTTTCTGCTTGCACGAGCTCTCCAACACTTTCTCAGGGTAGACAGGTTCACTCCTACATTATCAAGGCAGCTTTTGATTTCACTGTCGCTGTGTGTAATGCTTTGCTAACAATGTATGCAAAGTGTTCAAATCTCGATGATGCATTTGTTGTGTTTGAAAATATGAGAAATCATACTGATTCTGTTTCTTGGAATGCCATTATTACAGCGTGCATGCAGCACAACCAAGCTGGAGAAGTTTTCAGATTATTGAAGCTAATGCTTAGTTCTGAAATTAGGCCTGATTATATTACTTTAAGTAATGTAATTGGAGCATGTGCAGATATAGCATCTCTGGAAGTTGGGAATCAAATTCATTGCTTTACTGTGAAAAGTGGGTTTGTACTTGGTGTTACTGTCAGCAATGGATTGGTTGACATGTATACAAAGTGTGGATCGCTTGAAAGTGCCAGAAAGCTCTTTAGTTTGATGGAGAATCCAGATGTTGTGTCATGGAGTAGTTTGATTATGGGTTATGCTCAGTTCGGATGTGGAGAGGAAGCTCTTGAGCTGTTTAAAACAATGAAAGCATTGGGTGTAAAACCAAATGAAGTTACAATGGTGGGGGTCCTTACAGCTTGCAGTCATATTGGACTGGTTGAAGAAGGGCGGCAATTGTATAAAACCATGGAATCTGAACATGGTATTGTGCCGACAAGAGAGCATTGTTCTTGTATGGTTGACTTACTTGCTCGTGCCGGATGCTTACATGAAGCGGAGGAGTTCATCAAGAAAATGACATTTGAACCCGACATTGTGGTGTGGAAGACTCTACTAGCTGCCTGCAAAACCTGTGGGAACACTGAAATAGGAAAACAGGCAGCAGAGAATGTACTAAAACTAGATCCTTCCAATTCTGCTGCACTTGTGTTACTTTGCAACATCAATGCTTCTTCTGGCAGATGGGATGAAGTTGCCAGGTTGAGGAATATGATGCGAGAAAGTGGCGTAAAGAAAGTTCCAGGTCAGAGCTGGATTGAAGTCAAGGATAGGATCCATGTATTTTTAGTTGAAGATAGTTCGCACCCTGAGAGGGGTCGAATATATGCAATGCTAGAGGAGTTGTGGTTGCAGATGTTGGATGATGGTTGTGATCCACTTCAGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

601

Amino Acids

66.02

Weight (kDa)

5.89

Isoelectric Point (pI)

36.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	176 - 223	1.5e-08	PPR repeat family
PPR	PF01535	179 - 207	9.5e-07	PPR repeat
PPR_2	PF13041	279 - 326	2.5e-08	PPR repeat family
PPR_2	PF13041	379 - 427	3.5e-11	PPR repeat family
PPR	PF01535	382 - 412	3.7e-08	PPR repeat
E_motif	PF20431	499 - 559	1.1e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0014545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53360 AT3G53360
fragaria_vesca	FvH4_6g15460
malus_domestica	MD04G1103100.v1.1 MD12G1123300.v1.1
prunus_persica	Prupe.6G239900_v2.0.a1
pyrus_communis	pycom04g09820 pycom12g12200
rosa_chinensis	RchiOBHm_Chr3g0468941
rosa_laevigata	RLG00000024398
rosa_multiflora	Rmu_co8434945.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412440
rosa_rugosa	Rorug03G0097700
rosa_samantha	Rh3AG147500 Rh3BG170100 Rh3DG205100
rosa_wichuraiana	Rw3G013870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	697, 1079
AccII	CGCG	1 cut(s)	208
AciI	CCGC	4 cut(s)	369, 590, 1306, 1412
AclWI	GGATC	5 cut(s)	1099, 1535, 1684, 1697, 1784
AcsI	RAATTY	1 cut(s)	1008
AcuI	CTGAAG	1 cut(s)	1781
AfaI	GTAC	4 cut(s)	164, 657, 1041, 1530
AfiI	CCNNNNNNNGG	4 cut(s)	389, 1620, 1729, 1730
AflIII	ACRYGT	3 cut(s)	206, 465, 1074
AjnI	CCWGG	3 cut(s)	539, 1613, 1657
AjuI	GAANNNNNNNTTGG	4 cut(s)	65, 97, 269, 301
Alw21I	GWGCWC	3 cut(s)	62, 322, 677
Alw26I	GTCTC	3 cut(s)	82, 429, 616
AlwI	GGATC	5 cut(s)	1099, 1535, 1684, 1697, 1784
AlwNI	CAGNNNCTG	1 cut(s)	122
Ama87I	CYCGRG	2 cut(s)	61, 556
AoxI	GGCC	1 cut(s)	935
ApeKI	GCWGC	6 cut(s)	613, 725, 874, 1475, 1517, 1556
ApoI	RAATTY	1 cut(s)	1008
AspLEI	GCGC	1 cut(s)	151
AspS9I	GGNCC	1 cut(s)	1264
AvaI	CYCGRG	2 cut(s)	61, 556
AvaII	GGWCC	1 cut(s)	1264
BamHI	GGATCC	1 cut(s)	1689
BanII	GRGCYC	1 cut(s)	677
BauI	CACGAG	2 cut(s)	670, 1389
BbsI	GAAGAC	1 cut(s)	1469
Bbv12I	GWGCWC	3 cut(s)	62, 322, 677
BbvI	GCAGC	6 cut(s)	625, 737, 886, 1462, 1529, 1543
BccI	CCATC	3 cut(s)	1120, 1593, 1775
BcgI	CGANNNNNNTGC	4 cut(s)	240, 274, 537, 571
BciT130I	CCWGG	3 cut(s)	541, 1615, 1659
BclI	TGATCA	1 cut(s)	25
BcoDI	GTCTC	3 cut(s)	82, 429, 616
BfaI	CTAG	5 cut(s)	567, 606, 1472, 1538, 1751
BisI	GCNGC	7 cut(s)	614, 726, 875, 1307, 1476, 1518, 1557
BlsI	GCNGC	7 cut(s)	615, 727, 876, 1308, 1477, 1519, 1558
Bme1390I	CCNGG	3 cut(s)	541, 1615, 1659
Bme18I	GGWCC	1 cut(s)	1264
BmeT110I	CYCGRG	2 cut(s)	61, 556
BmgT120I	GGNCC	1 cut(s)	1264
BmiI	GGNNCC	2 cut(s)	1265, 1691
BmrFI	CCNGG	3 cut(s)	541, 1615, 1659
BmsI	GCATC	8 cut(s)	178, 440, 568, 600, 787, 995, 1388, 1620
BpiI	GAAGAC	1 cut(s)	1469
BpmI	CTGGAG	1 cut(s)	909
BpuEI	CTTGAG	1 cut(s)	1223
BsaJI	CCNNGG	1 cut(s)	1323
BsaWI	WCCGGW	1 cut(s)	382
BsaXI	ACNNNNNCTCC	4 cut(s)	661, 691, 1748, 1778
Bsc4I	CCNNNNNNNGG	4 cut(s)	389, 1620, 1729, 1730
Bse1I	ACTGG	2 cut(s)	127, 1296
Bse3DI	GCAATG	5 cut(s)	246, 555, 1012, 1066, 1752
BseBI	CCWGG	3 cut(s)	541, 1615, 1659
BseDI	CCNNGG	1 cut(s)	1323
BseGI	GGATG	7 cut(s)	414, 455, 615, 1190, 1403, 1609, 1783
BseLI	CCNNNNNNNGG	4 cut(s)	389, 1620, 1729, 1730
BseMI	GCAATG	5 cut(s)	246, 555, 1012, 1066, 1752
BseMII	CTCAG	3 cut(s)	704, 1190, 1716
BseNI	ACTGG	2 cut(s)	127, 1296
BseRI	GAGGAG	2 cut(s)	1430, 1769
BseXI	GCAGC	6 cut(s)	625, 737, 886, 1462, 1529, 1543
BsgI	GTGCAG	2 cut(s)	996, 1542
Bsh1236I	CGCG	1 cut(s)	208
Bsh1285I	CGRYCG	1 cut(s)	11
BshFI	GGCC	1 cut(s)	937
BsiEI	CGRYCG	1 cut(s)	11
BsiHKAI	GWGCWC	3 cut(s)	62, 322, 677
BsiHKCI	CYCGRG	2 cut(s)	61, 556
BsiSI	CCGG	2 cut(s)	383, 1395
BslI	CCNNNNNNNGG	4 cut(s)	389, 1620, 1729, 1730
BsmAI	GTCTC	3 cut(s)	82, 429, 616
BsmI	GAATGC	2 cut(s)	550, 856
BsnI	GGCC	1 cut(s)	937
BsoBI	CYCGRG	2 cut(s)	61, 556
Bsp1286I	GDGCHC	3 cut(s)	62, 322, 677
Bsp1407I	TGTACA	1 cut(s)	162
Bsp143I	GATC	7 cut(s)	8, 25, 552, 1091, 1540, 1689, 1789
Bsp19I	CCATGG	1 cut(s)	1323
BspACI	CCGC	4 cut(s)	369, 590, 1306, 1412
BspANI	GGCC	1 cut(s)	937
BspCNI	CTCAG	3 cut(s)	703, 1189, 1717
BspFNI	CGCG	1 cut(s)	208
BspLI	GGNNCC	2 cut(s)	1265, 1691
BspPI	GGATC	5 cut(s)	1099, 1535, 1684, 1697, 1784
BsrDI	GCAATG	5 cut(s)	246, 555, 1012, 1066, 1752
BsrGI	TGTACA	1 cut(s)	162
BsrI	ACTGG	2 cut(s)	127, 1296
BssECI	CCNNGG	1 cut(s)	1323
BssMI	GATC	7 cut(s)	8, 25, 552, 1091, 1540, 1689, 1789
BssNAI	GTATAC	1 cut(s)	1080
BssSI	CACGAG	2 cut(s)	670, 1389
BssT1I	CCWWGG	1 cut(s)	1323
Bst1107I	GTATAC	1 cut(s)	1080
Bst2BI	CACGAG	2 cut(s)	670, 1389
Bst2UI	CCWGG	3 cut(s)	541, 1615, 1659
Bst4CI	ACNGT	4 cut(s)	505, 742, 1024, 1054
BstAPI	GCANNNNNTGC	1 cut(s)	146
BstAUI	TGTACA	1 cut(s)	162
BstC8I	GCNNGC	6 cut(s)	58, 667, 868, 872, 1276, 1480
BstDEI	CTNAG	4 cut(s)	690, 920, 1176, 1725
BstDSI	CCRYGG	1 cut(s)	1323
BstF5I	GGATG	7 cut(s)	414, 455, 615, 1190, 1403, 1609, 1783
BstFNI	CGCG	1 cut(s)	208
BstHHI	GCGC	1 cut(s)	151
BstKTI	GATC	7 cut(s)	11, 28, 555, 1094, 1543, 1692, 1792
BstMAI	GTCTC	3 cut(s)	82, 429, 616
BstMBI	GATC	7 cut(s)	8, 25, 552, 1091, 1540, 1689, 1789
BstMCI	CGRYCG	1 cut(s)	11
BstMWI	GCNNNNNNNGC	4 cut(s)	146, 359, 587, 983
BstNI	CCWGG	3 cut(s)	541, 1615, 1659
BstNSI	RCATGY	4 cut(s)	469, 874, 975, 1078
BstSCI	CCNGG	3 cut(s)	539, 1613, 1657
BstUI	CGCG	1 cut(s)	208
BstV1I	GCAGC	6 cut(s)	625, 737, 886, 1462, 1529, 1543
BstV2I	GAAGAC	1 cut(s)	1469
BstX2I	RGATCY	2 cut(s)	1540, 1689
BstYI	RGATCY	2 cut(s)	1540, 1689
BstZ17I	GTATAC	1 cut(s)	1080
BsuRI	GGCC	1 cut(s)	937
BtgI	CCRYGG	1 cut(s)	1323
BtgZI	GCGATG	1 cut(s)	230
BtsCI	GGATG	7 cut(s)	414, 455, 615, 1190, 1403, 1609, 1783
BtsIMutI	CAGTG	2 cut(s)	738, 1497
Cac8I	GCNNGC	6 cut(s)	58, 667, 868, 872, 1276, 1480
CaiI	CAGNNNCTG	1 cut(s)	122
CfoI	GCGC	1 cut(s)	151
Cfr13I	GGNCC	1 cut(s)	1264
Csp6I	GTAC	4 cut(s)	163, 656, 1040, 1529
CspCI	CAANNNNNGTGG	2 cut(s)	1471, 1506
CviQI	GTAC	4 cut(s)	163, 656, 1040, 1529
DdeI	CTNAG	4 cut(s)	690, 920, 1176, 1725
DpnI	GATC	7 cut(s)	10, 27, 554, 1093, 1542, 1691, 1791
DpnII	GATC	7 cut(s)	8, 25, 552, 1091, 1540, 1689, 1789
DraI	TTTAAA	1 cut(s)	1213
Ecl136II	GAGCTC	1 cut(s)	675
Eco130I	CCWWGG	1 cut(s)	1323
Eco147I	AGGCCT	1 cut(s)	937
Eco24I	GRGCYC	1 cut(s)	677
Eco47I	GGWCC	1 cut(s)	1264
Eco53kI	GAGCTC	1 cut(s)	675
Eco57I	CTGAAG	1 cut(s)	1781
Eco88I	CYCGRG	2 cut(s)	61, 556
EcoICRI	GAGCTC	1 cut(s)	675
EcoO109I	RGGNCCY	1 cut(s)	1264
EcoRII	CCWGG	3 cut(s)	539, 1613, 1657
EcoT14I	CCWWGG	1 cut(s)	1323
EcoT22I	ATGCAT	2 cut(s)	193, 802
EcoT38I	GRGCYC	1 cut(s)	677
ErhI	CCWWGG	1 cut(s)	1323
FauNDI	CATATG	1 cut(s)	618
FbaI	TGATCA	1 cut(s)	25
FblI	GTMKAC	2 cut(s)	697, 1079
Fnu4HI	GCNGC	7 cut(s)	614, 726, 875, 1307, 1476, 1518, 1557
FokI	GGATG	7 cut(s)	421, 462, 622, 1197, 1410, 1616, 1790
FriOI	GRGCYC	1 cut(s)	677
Fsp4HI	GCNGC	7 cut(s)	614, 726, 875, 1307, 1476, 1518, 1557
FspBI	CTAG	5 cut(s)	567, 606, 1472, 1538, 1751
GlaI	GCGC	1 cut(s)	150
GluI	GCNGC	7 cut(s)	614, 726, 875, 1307, 1476, 1518, 1557
GsuI	CTGGAG	1 cut(s)	909
HaeIII	GGCC	1 cut(s)	937
HapII	CCGG	2 cut(s)	383, 1395
HhaI	GCGC	1 cut(s)	151
Hin6I	GCGC	1 cut(s)	149
HinP1I	GCGC	1 cut(s)	149
HincII	GTYRAC	2 cut(s)	1072, 1378
HindII	GTYRAC	2 cut(s)	1072, 1378
HindIII	AAGCTT	1 cut(s)	282
HinfI	GANTC	6 cut(s)	491, 836, 1003, 1132, 1328, 1465
HpaII	CCGG	2 cut(s)	383, 1395
Hpy188I	TCNGA	8 cut(s)	41, 118, 180, 902, 928, 1184, 1333, 1665
Hpy188III	TCNNGA	5 cut(s)	791, 992, 1136, 1202, 1426
HpyAV	CCTTC	4 cut(s)	214, 387, 1295, 1554
HpyCH4III	ACNGT	4 cut(s)	505, 742, 1024, 1054
HpyF10VI	GCNNNNNNNGC	4 cut(s)	146, 359, 587, 983
HpyF3I	CTNAG	4 cut(s)	690, 920, 1176, 1725
HspAI	GCGC	1 cut(s)	149
Ksp22I	TGATCA	1 cut(s)	25
Kzo9I	GATC	7 cut(s)	8, 25, 552, 1091, 1540, 1689, 1789
LmnI	GCTCC	2 cut(s)	458, 968
Lsp1109I	GCAGC	6 cut(s)	625, 737, 886, 1462, 1529, 1543
LweI	GCATC	8 cut(s)	178, 440, 568, 600, 787, 995, 1388, 1620
MaeI	CTAG	5 cut(s)	567, 606, 1472, 1538, 1751
MaeIII	GTNAC	5 cut(s)	461, 512, 1048, 1249, 1566
MalI	GATC	7 cut(s)	10, 27, 554, 1093, 1542, 1691, 1791
MboI	GATC	7 cut(s)	8, 25, 552, 1091, 1540, 1689, 1789
MboII	GAAGA	4 cut(s)	1310, 1474, 1581, 1721
MfeI	CAATTG	1 cut(s)	1310
MflI	RGATCY	2 cut(s)	1540, 1689
MhlI	GDGCHC	3 cut(s)	62, 322, 677
MluCI	AATT	6 cut(s)	439, 930, 963, 1008, 1310, 1549
MluI	ACGCGT	1 cut(s)	206
MlyI	GAGTC	2 cut(s)	500, 1459
MmeI	TCCRAC	3 cut(s)	553, 704, 1755
MnlI	CCTC	5 cut(s)	1186, 1408, 1614, 1722, 1747
Mph1103I	ATGCAT	2 cut(s)	193, 802
MseI	TTAA	3 cut(s)	297, 953, 1212
MslI	CAYNNNNRTG	2 cut(s)	102, 1454
MspI	CCGG	2 cut(s)	383, 1395
MspR9I	CCNGG	3 cut(s)	541, 1615, 1659
MunI	CAATTG	1 cut(s)	1310
Mva1269I	GAATGC	2 cut(s)	550, 856
MvaI	CCWGG	3 cut(s)	541, 1615, 1659
MvnI	CGCG	1 cut(s)	208
MwoI	GCNNNNNNNGC	4 cut(s)	146, 359, 587, 983
NcoI	CCATGG	1 cut(s)	1323
NdeI	CATATG	1 cut(s)	618
NdeII	GATC	7 cut(s)	8, 25, 552, 1091, 1540, 1689, 1789
NlaIV	GGNNCC	2 cut(s)	1265, 1691
NmuCI	GTSAC	2 cut(s)	461, 512
NsiI	ATGCAT	2 cut(s)	193, 802
NspI	RCATGY	4 cut(s)	469, 874, 975, 1078
PaeI	GCATGC	1 cut(s)	874
PceI	AGGCCT	1 cut(s)	937
PciI	ACATGT	2 cut(s)	465, 1074
PcsI	WCGNNNNNNNCGW	1 cut(s)	212
PctI	GAATGC	2 cut(s)	550, 856
PfeI	GAWTC	4 cut(s)	836, 1003, 1132, 1328
PfoI	TCCNGGA	1 cut(s)	539
PkrI	GCNGC	7 cut(s)	615, 727, 876, 1308, 1477, 1519, 1558
Ple19I	CGATCG	1 cut(s)	11
PleI	GAGTC	2 cut(s)	499, 1459
PpsI	GAGTC	2 cut(s)	499, 1459
PpuMI	RGGWCCY	1 cut(s)	1264
PscI	ACATGT	2 cut(s)	465, 1074
Psp124BI	GAGCTC	1 cut(s)	677
Psp5II	RGGWCCY	1 cut(s)	1264
Psp6I	CCWGG	3 cut(s)	539, 1613, 1657
PspGI	CCWGG	3 cut(s)	539, 1613, 1657
PspN4I	GGNNCC	2 cut(s)	1265, 1691
PspPI	GGNCC	1 cut(s)	1264
PspPPI	RGGWCCY	1 cut(s)	1264
PsrI	GAACNNNNNNTAC	2 cut(s)	1638, 1670
PstNI	CAGNNNCTG	1 cut(s)	122
PsuI	RGATCY	2 cut(s)	1540, 1689
PvuI	CGATCG	1 cut(s)	11
RsaI	GTAC	4 cut(s)	164, 657, 1041, 1530
RsaNI	GTAC	4 cut(s)	163, 656, 1040, 1529
RseI	CAYNNNNRTG	2 cut(s)	102, 1454
SacI	GAGCTC	1 cut(s)	677
SaqAI	TTAA	3 cut(s)	297, 953, 1212
SatI	GCNGC	7 cut(s)	614, 726, 875, 1307, 1476, 1518, 1557
Sau3AI	GATC	7 cut(s)	8, 25, 552, 1091, 1540, 1689, 1789
Sau96I	GGNCC	1 cut(s)	1264
SchI	GAGTC	2 cut(s)	500, 1459
ScrFI	CCNGG	3 cut(s)	541, 1615, 1659
SduI	GDGCHC	3 cut(s)	62, 322, 677
SfaNI	GCATC	8 cut(s)	178, 440, 568, 600, 787, 995, 1388, 1620
SinI	GGWCC	1 cut(s)	1264
SmiMI	CAYNNNNRTG	2 cut(s)	102, 1454
SmlI	CTYRAG	1 cut(s)	1202
SmoI	CTYRAG	1 cut(s)	1202
SphI	GCATGC	1 cut(s)	874
Sse9I	AATT	6 cut(s)	439, 930, 963, 1008, 1310, 1549
SseBI	AGGCCT	1 cut(s)	937
SsiI	CCGC	4 cut(s)	369, 590, 1306, 1412
SspMI	CTAG	5 cut(s)	567, 606, 1472, 1538, 1751
SstI	GAGCTC	1 cut(s)	677
StuI	AGGCCT	1 cut(s)	937
StyD4I	CCNGG	3 cut(s)	539, 1613, 1657
StyI	CCWWGG	1 cut(s)	1323
TaaI	ACNGT	4 cut(s)	505, 742, 1024, 1054
TaqI	TCGA	3 cut(s)	7, 792, 1735
TaqII	GACCGA	1 cut(s)	537
TasI	AATT	6 cut(s)	439, 930, 963, 1008, 1310, 1549
TatI	WGTACW	4 cut(s)	162, 655, 1039, 1528
TauI	GCSGC	1 cut(s)	1309
TfiI	GAWTC	4 cut(s)	836, 1003, 1132, 1328
Tru1I	TTAA	3 cut(s)	297, 953, 1212
Tru9I	TTAA	3 cut(s)	297, 953, 1212
TscAI	CASTG	2 cut(s)	745, 1504
TseFI	GTSAC	2 cut(s)	461, 512
TseI	GCWGC	6 cut(s)	613, 725, 874, 1475, 1517, 1556
Tsp45I	GTSAC	2 cut(s)	461, 512
TspDTI	ATGAA	9 cut(s)	233, 600, 651, 1001, 1235, 1260, 1411, 1422, 1620
TspRI	CASTG	2 cut(s)	745, 1504
VpaK11BI	GGWCC	1 cut(s)	1264
XapI	RAATTY	1 cut(s)	1008
XceI	RCATGY	4 cut(s)	469, 874, 975, 1078
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1665
XmiI	GTMKAC	2 cut(s)	697, 1079
XspI	CTAG	5 cut(s)	567, 606, 1472, 1538, 1751
Zsp2I	ATGCAT	2 cut(s)	193, 802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.