zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53820 AT5G43540 |
| fragaria_vesca | FvH4_4g03020 |
| malus_domestica | MD13G1209600.v1.1 MD16G1212300.v1.1 |
| prunus_persica | Prupe.1G034200_v2.0.a1 |
| pyrus_communis | pycom13g18170 pycom16g17830 |
| rosa_chinensis | RchiOBHm_Chr4g0391211 |
| rosa_laevigata | RLG00000009877 |
| rosa_multiflora | Rmu_sc0000040.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00337000 |
| rosa_rugosa | Rorug03G0335200 |
| rosa_samantha | Rh4AG035900 Rh4BG030900 Rh4CG039200 Rh4DG033600 |
| rosa_wichuraiana | Rw4G002820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 402 |
| AccIII | TCCGGA | 1 cut(s) | 41 |
| AclWI | GGATC | 3 cut(s) | 27, 52, 389 |
| AcsI | RAATTY | 1 cut(s) | 71 |
| AfaI | GTAC | 2 cut(s) | 418, 424 |
| AgsI | TTSAA | 1 cut(s) | 338 |
| AjiI | CACGTC | 1 cut(s) | 364 |
| AluBI | AGCT | 3 cut(s) | 104, 226, 379 |
| AluI | AGCT | 3 cut(s) | 104, 226, 379 |
| Alw21I | GWGCWC | 1 cut(s) | 381 |
| AlwI | GGATC | 3 cut(s) | 27, 52, 389 |
| Aor13HI | TCCGGA | 1 cut(s) | 41 |
| ApoI | RAATTY | 1 cut(s) | 71 |
| AspS9I | GGNCC | 2 cut(s) | 39, 260 |
| AvaII | GGWCC | 2 cut(s) | 39, 260 |
| BaeGI | GKGCMC | 1 cut(s) | 117 |
| BanII | GRGCYC | 1 cut(s) | 381 |
| BbsI | GAAGAC | 1 cut(s) | 180 |
| Bbv12I | GWGCWC | 1 cut(s) | 381 |
| BciVI | GTATCC | 1 cut(s) | 324 |
| BfaI | CTAG | 1 cut(s) | 386 |
| BfuI | GTATCC | 1 cut(s) | 324 |
| BglII | AGATCT | 1 cut(s) | 370 |
| Bme18I | GGWCC | 2 cut(s) | 39, 260 |
| BmgBI | CACGTC | 1 cut(s) | 364 |
| BmgT120I | GGNCC | 2 cut(s) | 39, 260 |
| BmsI | GCATC | 1 cut(s) | 175 |
| BpiI | GAAGAC | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 1 cut(s) | 395 |
| BsaAI | YACGTR | 1 cut(s) | 426 |
| BsaWI | WCCGGW | 1 cut(s) | 41 |
| BseAI | TCCGGA | 1 cut(s) | 41 |
| BseGI | GGATG | 1 cut(s) | 123 |
| BseSI | GKGCMC | 1 cut(s) | 117 |
| BsgI | GTGCAG | 1 cut(s) | 378 |
| Bsh1285I | CGRYCG | 1 cut(s) | 258 |
| BsiEI | CGRYCG | 1 cut(s) | 258 |
| BsiHKAI | GWGCWC | 1 cut(s) | 381 |
| BsiSI | CCGG | 1 cut(s) | 42 |
| Bsp1286I | GDGCHC | 2 cut(s) | 117, 381 |
| Bsp13I | TCCGGA | 1 cut(s) | 41 |
| Bsp143I | GATC | 5 cut(s) | 19, 26, 44, 370, 394 |
| BspEI | TCCGGA | 1 cut(s) | 41 |
| BspPI | GGATC | 3 cut(s) | 27, 52, 389 |
| BssMI | GATC | 5 cut(s) | 19, 26, 44, 370, 394 |
| Bst4CI | ACNGT | 2 cut(s) | 179, 256 |
| BstBAI | YACGTR | 1 cut(s) | 426 |
| BstF5I | GGATG | 1 cut(s) | 123 |
| BstKTI | GATC | 5 cut(s) | 22, 29, 47, 373, 397 |
| BstMBI | GATC | 5 cut(s) | 19, 26, 44, 370, 394 |
| BstMCI | CGRYCG | 1 cut(s) | 258 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 75 |
| BstSLI | GKGCMC | 1 cut(s) | 117 |
| BstSNI | TACGTA | 1 cut(s) | 426 |
| BstV2I | GAAGAC | 1 cut(s) | 180 |
| BstX2I | RGATCY | 2 cut(s) | 370, 394 |
| BstYI | RGATCY | 2 cut(s) | 370, 394 |
| BsuI | GTATCC | 1 cut(s) | 324 |
| BtrI | CACGTC | 1 cut(s) | 364 |
| BtsCI | GGATG | 1 cut(s) | 123 |
| BtsIMutI | CAGTG | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 2 cut(s) | 39, 260 |
| Csp6I | GTAC | 2 cut(s) | 417, 423 |
| CviAII | CATG | 2 cut(s) | 36, 118 |
| CviJI | RGCY | 4 cut(s) | 104, 226, 344, 379 |
| CviKI_1 | RGCY | 4 cut(s) | 104, 226, 344, 379 |
| CviQI | GTAC | 2 cut(s) | 417, 423 |
| DpnI | GATC | 5 cut(s) | 21, 28, 46, 372, 396 |
| DpnII | GATC | 5 cut(s) | 19, 26, 44, 370, 394 |
| Ecl136II | GAGCTC | 1 cut(s) | 379 |
| Eco105I | TACGTA | 1 cut(s) | 426 |
| Eco24I | GRGCYC | 1 cut(s) | 381 |
| Eco47I | GGWCC | 2 cut(s) | 39, 260 |
| Eco53kI | GAGCTC | 1 cut(s) | 379 |
| EcoICRI | GAGCTC | 1 cut(s) | 379 |
| EcoT38I | GRGCYC | 1 cut(s) | 381 |
| FaeI | CATG | 2 cut(s) | 39, 121 |
| FaiI | YATR | 8 cut(s) | 31, 37, 61, 65, 67, 119, 326, 402 |
| FatI | CATG | 2 cut(s) | 35, 117 |
| FauNDI | CATATG | 1 cut(s) | 65 |
| FokI | GGATG | 1 cut(s) | 110 |
| FriOI | GRGCYC | 1 cut(s) | 381 |
| FspBI | CTAG | 1 cut(s) | 386 |
| HapII | CCGG | 1 cut(s) | 42 |
| Hin1II | CATG | 2 cut(s) | 39, 121 |
| HindIII | AAGCTT | 1 cut(s) | 102 |
| HpaII | CCGG | 1 cut(s) | 42 |
| Hpy188III | TCNNGA | 3 cut(s) | 42, 204, 374 |
| Hpy99I | CGWCG | 1 cut(s) | 27 |
| HpyCH4III | ACNGT | 2 cut(s) | 179, 256 |
| HpyCH4IV | ACGT | 2 cut(s) | 363, 425 |
| HpyCH4V | TGCA | 2 cut(s) | 195, 359 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 75 |
| HpySE526I | ACGT | 2 cut(s) | 363, 425 |
| Hsp92II | CATG | 2 cut(s) | 39, 121 |
| Kpn2I | TCCGGA | 1 cut(s) | 41 |
| Kzo9I | GATC | 5 cut(s) | 19, 26, 44, 370, 394 |
| LmnI | GCTCC | 1 cut(s) | 384 |
| LpnPI | CCDG | 2 cut(s) | 55, 124 |
| LweI | GCATC | 1 cut(s) | 175 |
| MaeI | CTAG | 1 cut(s) | 386 |
| MaeII | ACGT | 2 cut(s) | 363, 425 |
| MaeIII | GTNAC | 1 cut(s) | 234 |
| MalI | GATC | 5 cut(s) | 21, 28, 46, 372, 396 |
| MboI | GATC | 5 cut(s) | 19, 26, 44, 370, 394 |
| MboII | GAAGA | 7 cut(s) | 182, 185, 194, 235, 279, 290, 323 |
| MflI | RGATCY | 2 cut(s) | 370, 394 |
| MhlI | GDGCHC | 2 cut(s) | 117, 381 |
| MluCI | AATT | 1 cut(s) | 71 |
| MmeI | TCCRAC | 1 cut(s) | 117 |
| MnlI | CCTC | 3 cut(s) | 77, 104, 321 |
| MroI | TCCGGA | 1 cut(s) | 41 |
| MslI | CAYNNNNRTG | 2 cut(s) | 34, 64 |
| MspI | CCGG | 1 cut(s) | 42 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 75 |
| NdeI | CATATG | 1 cut(s) | 65 |
| NdeII | GATC | 5 cut(s) | 19, 26, 44, 370, 394 |
| NlaIII | CATG | 2 cut(s) | 39, 121 |
| Ppu21I | YACGTR | 1 cut(s) | 426 |
| PsiI | TTATAA | 1 cut(s) | 402 |
| Psp124BI | GAGCTC | 1 cut(s) | 381 |
| PspPI | GGNCC | 2 cut(s) | 39, 260 |
| PsuI | RGATCY | 2 cut(s) | 370, 394 |
| RsaI | GTAC | 2 cut(s) | 418, 424 |
| RsaNI | GTAC | 2 cut(s) | 417, 423 |
| RseI | CAYNNNNRTG | 2 cut(s) | 34, 64 |
| SacI | GAGCTC | 1 cut(s) | 381 |
| Sau3AI | GATC | 5 cut(s) | 19, 26, 44, 370, 394 |
| Sau96I | GGNCC | 2 cut(s) | 39, 260 |
| SduI | GDGCHC | 2 cut(s) | 117, 381 |
| SetI | ASST | 9 cut(s) | 88, 106, 165, 228, 241, 301, 366, 381, 428 |
| SfaNI | GCATC | 1 cut(s) | 175 |
| SinI | GGWCC | 2 cut(s) | 39, 260 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 34, 64 |
| SmlI | CTYRAG | 1 cut(s) | 374 |
| SmoI | CTYRAG | 1 cut(s) | 374 |
| SnaBI | TACGTA | 1 cut(s) | 426 |
| Sse9I | AATT | 1 cut(s) | 71 |
| SspMI | CTAG | 1 cut(s) | 386 |
| SstI | GAGCTC | 1 cut(s) | 381 |
| TaaI | ACNGT | 2 cut(s) | 179, 256 |
| TaiI | ACGT | 2 cut(s) | 366, 428 |
| TaqI | TCGA | 3 cut(s) | 25, 151, 203 |
| TaqII | GACCGA | 1 cut(s) | 248 |
| TasI | AATT | 1 cut(s) | 71 |
| TatI | WGTACW | 1 cut(s) | 416 |
| TscAI | CASTG | 1 cut(s) | 184 |
| TspDTI | ATGAA | 4 cut(s) | 17, 24, 134, 324 |
| TspGWI | ACGGA | 1 cut(s) | 371 |
| TspRI | CASTG | 1 cut(s) | 184 |
| VpaK11BI | GGWCC | 2 cut(s) | 39, 260 |
| XapI | RAATTY | 1 cut(s) | 71 |
| XspI | CTAG | 1 cut(s) | 386 |