Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0013418

Physical Location & Seq

Genomic Coordinates Reverse (-)

39364067 .. 39366682

Gene Structure 2616 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0335200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGAACCCACATGGAGAACTTTGTACTAAACGAGCTCCCGGAAAGGGCGAACGTGTGGCTAAAAGCGGTCAGGAATACGAGAGATCTCTTTCGTTACGTTCGATCAAACTCACTATGTCGCTTGAGAGTCGACCAACATGGGCTACTCAGGCCAATGTTCATTCTGGCATTCTTAGATTCGACCCTCACGCAGAAGATGAGGTCATCAAATCGTGCCCCAGTTATAGCAACCTGTTTCAGGCCTATACTCTGGAAAAGGTGAACAATGATGAGTATGGTGATGATAAGATGTTTGTTGGAGCGAACTTTTATCCGGCACTACACTGGATGTTACAGAGTAAGCAAGAATGGGGCAACGATTTTAACTTTCGAGGTCGATCCATCTTTGGCTTCGGCGTATTAGAATGGACCGAAAATGTCTTGGAGACCTTCAAGGATACCTTATATGAAGCAGGTATATATGGAGCTGTTGCTGTGTCTCGCTATCCTTATGAGTCTTCAAAGAATGTTTGGAGGGCATTTTGTGAATTATGGGGCCCTTTGTCCAACACATTACATTTTGCCGATTGTGAGATGAACATTTCTTTATCTGACTTGAAAGTTATCGGAGGTCTGCCCATTTCTGGCGATCAATGGCTTACCCATTTCTTCCAAGGGGAACTCGTATATGCTTCACCTGACGAAGACAACGCAGTGCTGCCAAAGTCAAGGACTCCTAGACTACCATTGAGAATTTCTGAGGAAGGGAAGCTTGCTGCTTTTCTTGTATTTTGGTTGTGCAGGTTTGTCTTACCCACCTGGAATAAAACAATAAGGCTGGAGACATTTCATATGGCGTGTTTGATGGCAAACGGAGTTAAAGTTTCCATTGCACCGACAACATTAGGGTATATTTATCACCGCCTTAGAGAAGTTGCTTCTCATCCTTTGTGTAAACGACAAGCGGACAGTGAGTTTCCAGCAAATTATCCGCGTCTAGCAAGGTCTGCTTATGTTGCAAGCAAAGATTTGTCCATTACTTGCGCCATAATGGTCTTTTGGGATAACACGTCTGCAATCTATCGTCCCCATGCTTTTCTTGAAACTGAGGGCTGTTTTCTGTTAGACGATGAGACTCTGTCAGACGAGAGACTTGAGTTTCTTTTGGGTCTTGCTCTCTATGATCAGAGTGTTCCCTCTAACCGCCTCTCTTTTAGCGTGTCAAAGAGGAAGCAGTGTTTTGTTGAGGACTTAGCGAGAGCCCAGTCTATTCTTTATAGGAGGAACAAAACAGCTCGTGTTTATATCCGAAGATCGACGCGTGAAGGAGAATGCACTTGGTGGTACTACAAGTGGTGGTTGAAAGCTTTGAACAAACTTGCTGATGTTTCTGCGGATCTGAGAAAGGAAGTTCATATTTCATCTTTACCTAGACAAGAGAGTCAGAATTCTCAAACAGACCTTAGCAAGGTTAGGCCAGATGGTAATAACCGTATTAGTAGGAAGCGTATTAGCCATGAGAAGGTGGCAACTTTTGAAAAGACAGTATCCAGAGATGTGAGTTTCCCCAAGGCAAGAACTGATAGTCAAGATGCACAGAAAGCTCCCAAGAGGAAACCTAACAGTTTAAATCCTCCTAATAATCCTTCAGCAGTTGTTCCAAATGTCCAGCAAACAGAAAGTGGATTTAGCTCAAGTACTGATCCTTCTAGAGTGGAAATTGTAGTCCGAACTTCTAAAAGGAAACCTGCAGAGCGTCCGAGCAACGTACGTCCCCAAAGGGCTCAAACTACTATTGATCAAGATGTTAAGAAAGCAGCTGTACCTCAGAAAGCCGGTATTTCTAGCAAACATCCCTCAACCAAGTGCATGGCGACTATAGAGGATATGGGGAGCTTTCTATCAGCTATACTTGATCCTGAGCTGGCTTCATTCACGAGGAACTATCTTATTGGTCATGTGAGTGACATTTTTGTGAAAGTTTCTTCCTCAAAGACATCAGAAGATTTATTGGCCCATCATGAAGAAATCAAATTAGCTTTGGGTATGCTCCGTCCCGACATTGAGTCCTTGAAGTCTGGTAAAGATCTGTTCGAGAAATTCACATCCACCATTGGAGATATGCTAGCGGCAGCAGTGGATTCTTTGAGAACTATTGCACTTCTGAAAAGAGAGCACAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044093 GO:0044424 GO:0044464 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051252 GO:0051338 GO:0051347 GO:0051972 GO:0051973 GO:0060255 GO:0065007 GO:0065009 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2000278 GO:2000573 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

721

Amino Acids

81.63

Weight (kDa)

8.94

Isoelectric Point (pI)

47.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMD	PF10536	152 - 308	3.3e-17	Plant mobile domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53820 AT5G43540
fragaria_vesca	FvH4_4g03020
malus_domestica	MD13G1209600.v1.1 MD16G1212300.v1.1
prunus_persica	Prupe.1G034200_v2.0.a1
pyrus_communis	pycom13g18170 pycom16g17830
rosa_chinensis	RchiOBHm_Chr4g0391211
rosa_laevigata	RLG00000009877
rosa_multiflora	Rmu_sc0000040.1_g000014
rosa_roxburghii	Rroxscaffold_5G00337000
rosa_rugosa	Rorug03G0335200
rosa_samantha	Rh4AG035900 Rh4BG030900 Rh4CG039200 Rh4DG033600
rosa_wichuraiana	Rw4G002820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1419
Acc36I	ACCTGC	3 cut(s)	443, 771, 1735
AccI	GTMKAC	1 cut(s)	130
AccII	CGCG	2 cut(s)	973, 1300
AciI	CCGC	7 cut(s)	66, 901, 944, 971, 1183, 1373, 2108
AclWI	GGATC	4 cut(s)	372, 1383, 1676, 1889
AcsI	RAATTY	3 cut(s)	732, 1426, 2078
AcuI	CTGAAG	1 cut(s)	1611
AdeI	CACNNNGTG	1 cut(s)	1320
AfaI	GTAC	5 cut(s)	25, 1325, 1678, 1749, 1803
AfiI	CCNNNNNNNGG	5 cut(s)	44, 238, 623, 1447, 1501
AflIII	ACRYGT	3 cut(s)	52, 1047, 1298
AgsI	TTSAA	8 cut(s)	433, 501, 598, 1082, 1342, 1351, 1517, 2053
AhdI	GACNNNNNGTC	1 cut(s)	2044
AjiI	CACGTC	1 cut(s)	1050
AjnI	CCWGG	1 cut(s)	797
Alw21I	GWGCWC	2 cut(s)	37, 2157
Alw26I	GTCTC	5 cut(s)	419, 483, 815, 1106, 1123
AlwI	GGATC	4 cut(s)	372, 1383, 1676, 1889
AoxI	GGCC	5 cut(s)	150, 240, 535, 1454, 1992
ApaI	GGGCCC	1 cut(s)	539
ApeKI	GCWGC	4 cut(s)	697, 755, 1796, 2111
ApoI	RAATTY	3 cut(s)	732, 1426, 2078
AspLEI	GCGC	1 cut(s)	1025
AspS9I	GGNCC	4 cut(s)	408, 535, 536, 1993
AsuC2I	CCSGG	1 cut(s)	39
AsuHPI	GGTGA	4 cut(s)	271, 290, 666, 890
AsuNHI	GCTAGC	1 cut(s)	2104
AvaII	GGWCC	1 cut(s)	408
BaeGI	GKGCMC	2 cut(s)	218, 539
BanII	GRGCYC	4 cut(s)	37, 539, 1243, 1765
BarI	GAAGNNNNNNTAC	2 cut(s)	1669, 1701
BauI	CACGAG	2 cut(s)	1275, 1915
BbsI	GAAGAC	2 cut(s)	489, 690
Bbv12I	GWGCWC	2 cut(s)	37, 2157
BbvI	GCAGC	4 cut(s)	684, 742, 1808, 2123
BccI	CCATC	4 cut(s)	389, 838, 1454, 2004
BciT130I	CCWGG	1 cut(s)	799
BciVI	GTATCC	2 cut(s)	430, 1537
BclI	TGATCA	2 cut(s)	1162, 1777
BcnI	CCSGG	1 cut(s)	39
BcoDI	GTCTC	5 cut(s)	419, 483, 815, 1106, 1123
BfaI	CTAG	6 cut(s)	717, 977, 1410, 1689, 1824, 2105
BfmI	CTRYAG	2 cut(s)	1728, 1857
BfuAI	ACCTGC	3 cut(s)	443, 771, 1735
BfuI	GTATCC	2 cut(s)	430, 1537
BglII	AGATCT	2 cut(s)	83, 2065
BisI	GCNGC	5 cut(s)	698, 756, 1797, 2109, 2112
BlsI	GCNGC	5 cut(s)	699, 757, 1798, 2110, 2113
BmcAI	AGTACT	1 cut(s)	1678
Bme1390I	CCNGG	2 cut(s)	39, 799
Bme18I	GGWCC	1 cut(s)	408
BmeRI	GACNNNNNGTC	1 cut(s)	2044
BmgBI	CACGTC	1 cut(s)	1050
BmgT120I	GGNCC	4 cut(s)	408, 535, 536, 1993
BmiI	GGNNCC	2 cut(s)	536, 537
BmrFI	CCNGG	2 cut(s)	39, 799
BmrI	ACTGGG	2 cut(s)	213, 1237
BmsI	GCATC	1 cut(s)	1561
BmtI	GCTAGC	1 cut(s)	2108
BmuI	ACTGGG	2 cut(s)	213, 1237
BpiI	GAAGAC	2 cut(s)	489, 690
BpmI	CTGGAG	1 cut(s)	839
Bpu10I	CCTNAGC	2 cut(s)	1442, 1899
BpuEI	CTTGAG	3 cut(s)	143, 1154, 1657
BpuMI	CCSGG	1 cut(s)	39
BsaI	GGTCTC	1 cut(s)	419
BsaJI	CCNNGG	2 cut(s)	652, 1548
BsaXI	ACNNNNNCTCC	2 cut(s)	846, 876
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 238, 623, 1447, 1501
Bse118I	RCCGGY	1 cut(s)	1814
Bse1I	ACTGG	3 cut(s)	219, 329, 1243
Bse3DI	GCAATG	1 cut(s)	867
BseBI	CCWGG	1 cut(s)	799
BseDI	CCNNGG	2 cut(s)	652, 1548
BseGI	GGATG	4 cut(s)	333, 922, 1831, 2084
BseLI	CCNNNNNNNGG	5 cut(s)	44, 238, 623, 1447, 1501
BseMI	GCAATG	1 cut(s)	867
BseMII	CTCAG	6 cut(s)	161, 729, 1077, 1370, 1820, 1890
BseNI	ACTGG	3 cut(s)	219, 329, 1243
BseSI	GKGCMC	2 cut(s)	218, 539
BseXI	GCAGC	4 cut(s)	684, 742, 1808, 2123
BsgI	GTGCAG	1 cut(s)	799
Bsh1236I	CGCG	2 cut(s)	973, 1300
BshFI	GGCC	5 cut(s)	152, 242, 537, 1456, 1994
BsiHKAI	GWGCWC	2 cut(s)	37, 2157
BsiSI	CCGG	3 cut(s)	39, 314, 1815
BsiWI	CGTACG	1 cut(s)	1747
BslFI	GGGAC	3 cut(s)	1050, 1737, 2019
BslI	CCNNNNNNNGG	5 cut(s)	44, 238, 623, 1447, 1501
BsmAI	GTCTC	5 cut(s)	419, 483, 815, 1106, 1123
BsmFI	GGGAC	3 cut(s)	1050, 1737, 2019
BsmI	GAATGC	2 cut(s)	168, 1316
BsnI	GGCC	5 cut(s)	152, 242, 537, 1456, 1994
Bso31I	GGTCTC	1 cut(s)	419
Bsp120I	GGGCCC	1 cut(s)	535
Bsp1286I	GDGCHC	6 cut(s)	37, 218, 539, 1243, 1765, 2157
BspACI	CCGC	7 cut(s)	66, 901, 944, 971, 1183, 1373, 2108
BspANI	GGCC	5 cut(s)	152, 242, 537, 1456, 1994
BspCNI	CTCAG	6 cut(s)	160, 730, 1078, 1371, 1819, 1891
BspFNI	CGCG	2 cut(s)	973, 1300
BspHI	TCATGA	1 cut(s)	1999
BspLI	GGNNCC	2 cut(s)	536, 537
BspMAI	CTGCAG	1 cut(s)	1732
BspMI	ACCTGC	3 cut(s)	443, 771, 1735
BspOI	GCTAGC	1 cut(s)	2108
BspPI	GGATC	4 cut(s)	372, 1383, 1676, 1889
BspTNI	GGTCTC	1 cut(s)	419
BsrDI	GCAATG	1 cut(s)	867
BsrFI	RCCGGY	1 cut(s)	1814
BsrI	ACTGG	3 cut(s)	219, 329, 1243
BssAI	RCCGGY	1 cut(s)	1814
BssECI	CCNNGG	2 cut(s)	652, 1548
BssSI	CACGAG	2 cut(s)	1275, 1915
BssT1I	CCWWGG	2 cut(s)	652, 1548
Bst2BI	CACGAG	2 cut(s)	1275, 1915
Bst2UI	CCWGG	1 cut(s)	799
Bst4CI	ACNGT	4 cut(s)	950, 1472, 1525, 1604
BstAPI	GCANNNNNTGC	1 cut(s)	986
BstC8I	GCNNGC	4 cut(s)	753, 1000, 1905, 2106
BstENI	CCTNNNNNAGG	2 cut(s)	236, 1445
BstF5I	GGATG	4 cut(s)	333, 922, 1831, 2084
BstFNI	CGCG	2 cut(s)	973, 1300
BstHHI	GCGC	1 cut(s)	1025
BstMAI	GTCTC	5 cut(s)	419, 483, 815, 1106, 1123
BstMWI	GCNNNNNNNGC	4 cut(s)	149, 986, 995, 1580
BstNI	CCWGG	1 cut(s)	799
BstSCI	CCNGG	2 cut(s)	37, 797
BstSFI	CTRYAG	2 cut(s)	1728, 1857
BstSLI	GKGCMC	2 cut(s)	218, 539
BstUI	CGCG	2 cut(s)	973, 1300
BstV1I	GCAGC	4 cut(s)	684, 742, 1808, 2123
BstV2I	GAAGAC	2 cut(s)	489, 690
BstX2I	RGATCY	3 cut(s)	83, 1375, 2065
BstXI	CCANNNNNNTGG	1 cut(s)	1849
BstYI	RGATCY	3 cut(s)	83, 1375, 2065
BsuI	GTATCC	2 cut(s)	430, 1537
BsuRI	GGCC	5 cut(s)	152, 242, 537, 1456, 1994
BtrI	CACGTC	1 cut(s)	1050
BtsCI	GGATG	4 cut(s)	333, 922, 1831, 2084
BtsI	GCAGTG	3 cut(s)	699, 1220, 2121
BtsIMutI	CAGTG	5 cut(s)	322, 699, 955, 1220, 2121
BveI	ACCTGC	3 cut(s)	443, 771, 1735
Cac8I	GCNNGC	4 cut(s)	753, 1000, 1905, 2106
CciI	TCATGA	1 cut(s)	1999
CfoI	GCGC	1 cut(s)	1025
Cfr10I	RCCGGY	1 cut(s)	1814
Cfr13I	GGNCC	4 cut(s)	408, 535, 536, 1993
CseI	GACGC	3 cut(s)	962, 1306, 1724
Csp6I	GTAC	5 cut(s)	24, 1324, 1677, 1748, 1802
CviAII	CATG	7 cut(s)	11, 138, 1070, 1496, 1849, 1937, 2000
CviQI	GTAC	5 cut(s)	24, 1324, 1677, 1748, 1802
DraI	TTTAAA	1 cut(s)	1608
DraIII	CACNNNGTG	1 cut(s)	1320
DrdI	GACNNNNNNGTC	1 cut(s)	1419
DriI	GACNNNNNGTC	1 cut(s)	2044
DseDI	GACNNNNNNGTC	1 cut(s)	1419
Eam1105I	GACNNNNNGTC	1 cut(s)	2044
Ecl136II	GAGCTC	1 cut(s)	35
Eco130I	CCWWGG	2 cut(s)	652, 1548
Eco147I	AGGCCT	1 cut(s)	242
Eco24I	GRGCYC	4 cut(s)	37, 539, 1243, 1765
Eco31I	GGTCTC	1 cut(s)	419
Eco47I	GGWCC	1 cut(s)	408
Eco53kI	GAGCTC	1 cut(s)	35
Eco57I	CTGAAG	1 cut(s)	1611
EcoICRI	GAGCTC	1 cut(s)	35
EcoNI	CCTNNNNNAGG	2 cut(s)	236, 1445
EcoO109I	RGGNCCY	2 cut(s)	535, 536
EcoRI	GAATTC	1 cut(s)	1426
EcoRII	CCWGG	1 cut(s)	797
EcoT14I	CCWWGG	2 cut(s)	652, 1548
EcoT38I	GRGCYC	4 cut(s)	37, 539, 1243, 1765
ErhI	CCWWGG	2 cut(s)	652, 1548
FaeI	CATG	7 cut(s)	14, 141, 1073, 1499, 1852, 1940, 2003
FalI	AAGNNNNNCTT	6 cut(s)	425, 457, 735, 767, 973, 1005
FaqI	GGGAC	3 cut(s)	1050, 1737, 2019
FatI	CATG	7 cut(s)	10, 137, 1069, 1495, 1848, 1936, 1999
FauNDI	CATATG	1 cut(s)	831
FbaI	TGATCA	2 cut(s)	1162, 1777
FblI	GTMKAC	1 cut(s)	130
Fnu4HI	GCNGC	5 cut(s)	698, 756, 1797, 2109, 2112
FokI	GGATG	4 cut(s)	340, 909, 1818, 2071
FriOI	GRGCYC	4 cut(s)	37, 539, 1243, 1765
Fsp4HI	GCNGC	5 cut(s)	698, 756, 1797, 2109, 2112
FspBI	CTAG	6 cut(s)	717, 977, 1410, 1689, 1824, 2105
GlaI	GCGC	1 cut(s)	1024
GluI	GCNGC	5 cut(s)	698, 756, 1797, 2109, 2112
GsuI	CTGGAG	1 cut(s)	839
HaeIII	GGCC	5 cut(s)	152, 242, 537, 1456, 1994
HapII	CCGG	3 cut(s)	39, 314, 1815
HgaI	GACGC	3 cut(s)	962, 1306, 1724
HhaI	GCGC	1 cut(s)	1025
Hin1II	CATG	7 cut(s)	14, 141, 1073, 1499, 1852, 1940, 2003
Hin6I	GCGC	1 cut(s)	1023
HinP1I	GCGC	1 cut(s)	1023
HincII	GTYRAC	1 cut(s)	131
HindII	GTYRAC	1 cut(s)	131
HindIII	AAGCTT	2 cut(s)	749, 1344
HinfI	GANTC	8 cut(s)	127, 177, 494, 712, 1114, 1420, 2045, 2120
HpaII	CCGG	3 cut(s)	39, 314, 1815
HphI	GGTGA	4 cut(s)	271, 290, 666, 890
Hpy166II	GTNNAC	3 cut(s)	131, 262, 935
Hpy8I	GTNNAC	3 cut(s)	131, 262, 935
Hpy99I	CGWCG	1 cut(s)	1300
HpyAV	CCTTC	6 cut(s)	439, 737, 1298, 1495, 1635, 1695
HpyCH4III	ACNGT	4 cut(s)	950, 1472, 1525, 1604
HpyCH4IV	ACGT	5 cut(s)	52, 97, 1049, 1746, 1750
HpyCH4V	TGCA	9 cut(s)	780, 872, 998, 1055, 1314, 1574, 1730, 1848, 2138
HpyF10VI	GCNNNNNNNGC	4 cut(s)	149, 986, 995, 1580
HpySE526I	ACGT	5 cut(s)	52, 97, 1049, 1746, 1750
Hsp92II	CATG	7 cut(s)	14, 141, 1073, 1499, 1852, 1940, 2003
HspAI	GCGC	1 cut(s)	1023
Ksp22I	TGATCA	2 cut(s)	1162, 1777
LmnI	GCTCC	6 cut(s)	40, 299, 464, 1588, 1872, 2034
Lsp1109I	GCAGC	4 cut(s)	684, 742, 1808, 2123
LweI	GCATC	1 cut(s)	1561
MaeI	CTAG	6 cut(s)	717, 977, 1410, 1689, 1824, 2105
MaeII	ACGT	5 cut(s)	52, 97, 1049, 1746, 1750
MaeIII	GTNAC	3 cut(s)	93, 330, 1943
MboII	GAAGA	8 cut(s)	206, 489, 640, 695, 1302, 1956, 1994, 2015
MflI	RGATCY	3 cut(s)	83, 1375, 2065
MhlI	GDGCHC	6 cut(s)	37, 218, 539, 1243, 1765, 2157
MluCI	AATT	7 cut(s)	527, 732, 964, 1426, 1698, 2012, 2078
MluI	ACGCGT	1 cut(s)	1298
MlyI	GAGTC	6 cut(s)	136, 503, 706, 1108, 1429, 2054
MmeI	TCCRAC	2 cut(s)	277, 570
MseI	TTAA	4 cut(s)	363, 858, 1607, 1788
MslI	CAYNNNNRTG	2 cut(s)	1941, 1952
MspA1I	CMGCKG	1 cut(s)	1799
MspI	CCGG	3 cut(s)	39, 314, 1815
MspR9I	CCNGG	2 cut(s)	39, 799
Mva1269I	GAATGC	2 cut(s)	168, 1316
MvaI	CCWGG	1 cut(s)	799
MvnI	CGCG	2 cut(s)	973, 1300
MwoI	GCNNNNNNNGC	4 cut(s)	149, 986, 995, 1580
NciI	CCSGG	1 cut(s)	39
NdeI	CATATG	1 cut(s)	831
NheI	GCTAGC	1 cut(s)	2104
NlaIII	CATG	7 cut(s)	14, 141, 1073, 1499, 1852, 1940, 2003
NlaIV	GGNNCC	2 cut(s)	536, 537
NmuCI	GTSAC	1 cut(s)	1943
PagI	TCATGA	1 cut(s)	1999
PceI	AGGCCT	1 cut(s)	242
PcsI	WCGNNNNNNNCGW	1 cut(s)	98
PctI	GAATGC	2 cut(s)	168, 1316
PfeI	GAWTC	2 cut(s)	177, 2120
Pfl23II	CGTACG	1 cut(s)	1747
PflFI	GACNNNGTC	1 cut(s)	1117
PfoI	TCCNGGA	1 cut(s)	37
PkrI	GCNGC	5 cut(s)	699, 757, 1798, 2110, 2113
PleI	GAGTC	6 cut(s)	135, 502, 706, 1108, 1428, 2053
PpsI	GAGTC	6 cut(s)	135, 502, 706, 1108, 1428, 2053
Psp124BI	GAGCTC	1 cut(s)	37
Psp6I	CCWGG	1 cut(s)	797
PspGI	CCWGG	1 cut(s)	797
PspLI	CGTACG	1 cut(s)	1747
PspN4I	GGNNCC	2 cut(s)	536, 537
PspOMI	GGGCCC	1 cut(s)	535
PspPI	GGNCC	4 cut(s)	408, 535, 536, 1993
PstI	CTGCAG	1 cut(s)	1732
PsuI	RGATCY	3 cut(s)	83, 1375, 2065
PsyI	GACNNNGTC	1 cut(s)	1117
PvuII	CAGCTG	1 cut(s)	1799
RsaI	GTAC	5 cut(s)	25, 1325, 1678, 1749, 1803
RsaNI	GTAC	5 cut(s)	24, 1324, 1677, 1748, 1802
RseI	CAYNNNNRTG	2 cut(s)	1941, 1952
SacI	GAGCTC	1 cut(s)	37
SalI	GTCGAC	1 cut(s)	129
SaqAI	TTAA	4 cut(s)	363, 858, 1607, 1788
SatI	GCNGC	5 cut(s)	698, 756, 1797, 2109, 2112
Sau96I	GGNCC	4 cut(s)	408, 535, 536, 1993
ScaI	AGTACT	1 cut(s)	1678
SchI	GAGTC	6 cut(s)	136, 503, 706, 1108, 1429, 2054
ScrFI	CCNGG	2 cut(s)	39, 799
SduI	GDGCHC	6 cut(s)	37, 218, 539, 1243, 1765, 2157
SfaNI	GCATC	1 cut(s)	1561
SfcI	CTRYAG	2 cut(s)	1728, 1857
SinI	GGWCC	1 cut(s)	408
SmiMI	CAYNNNNRTG	2 cut(s)	1941, 1952
SmlI	CTYRAG	3 cut(s)	122, 1133, 1672
SmoI	CTYRAG	3 cut(s)	122, 1133, 1672
Sse9I	AATT	7 cut(s)	527, 732, 964, 1426, 1698, 2012, 2078
SseBI	AGGCCT	1 cut(s)	242
SsiI	CCGC	7 cut(s)	66, 901, 944, 971, 1183, 1373, 2108
SspMI	CTAG	6 cut(s)	717, 977, 1410, 1689, 1824, 2105
SstI	GAGCTC	1 cut(s)	37
StuI	AGGCCT	1 cut(s)	242
StyD4I	CCNGG	2 cut(s)	37, 797
StyI	CCWWGG	2 cut(s)	652, 1548
TaaI	ACNGT	4 cut(s)	950, 1472, 1525, 1604
TaiI	ACGT	5 cut(s)	55, 100, 1052, 1749, 1753
TaqI	TCGA	7 cut(s)	101, 130, 180, 370, 376, 1295, 2073
TaqII	GACCGA	1 cut(s)	425
TasI	AATT	7 cut(s)	527, 732, 964, 1426, 1698, 2012, 2078
TatI	WGTACW	2 cut(s)	23, 1676
TauI	GCSGC	1 cut(s)	2111
TfiI	GAWTC	2 cut(s)	177, 2120
Tru1I	TTAA	4 cut(s)	363, 858, 1607, 1788
Tru9I	TTAA	4 cut(s)	363, 858, 1607, 1788
TscAI	CASTG	5 cut(s)	329, 699, 955, 1220, 2121
TseFI	GTSAC	1 cut(s)	1943
TseI	GCWGC	4 cut(s)	697, 755, 1796, 2111
Tsp45I	GTSAC	1 cut(s)	1943
TspDTI	ATGAA	9 cut(s)	17, 149, 462, 590, 818, 1382, 1389, 1899, 2016
TspGWI	ACGGA	2 cut(s)	867, 2021
TspRI	CASTG	5 cut(s)	329, 699, 955, 1220, 2121
Tth111I	GACNNNGTC	1 cut(s)	1117
VpaK11BI	GGWCC	1 cut(s)	408
XagI	CCTNNNNNAGG	2 cut(s)	236, 1445
XapI	RAATTY	3 cut(s)	732, 1426, 2078
XbaI	TCTAGA	1 cut(s)	1688
XmiI	GTMKAC	1 cut(s)	130
XspI	CTAG	6 cut(s)	717, 977, 1410, 1689, 1824, 2105
ZrmI	AGTACT	1 cut(s)	1678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.