Transcriptional regulator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53820 AT5G43540 |
| fragaria_vesca | FvH4_4g03020 |
| malus_domestica | MD13G1209600.v1.1 MD16G1212300.v1.1 |
| prunus_persica | Prupe.1G034200_v2.0.a1 |
| pyrus_communis | pycom13g18170 pycom16g17830 |
| rosa_chinensis | RchiOBHm_Chr4g0391211 |
| rosa_laevigata | RLG00000009877 |
| rosa_multiflora | Rmu_sc0000040.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00337000 |
| rosa_rugosa | Rorug03G0335200 |
| rosa_samantha | Rh4AG035900 Rh4BG030900 Rh4CG039200 Rh4DG033600 |
| rosa_wichuraiana | Rw4G002820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 255, 348 |
| AcsI | RAATTY | 1 cut(s) | 461 |
| AfaI | GTAC | 3 cut(s) | 211, 268, 326 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 337 |
| AgsI | TTSAA | 3 cut(s) | 39, 228, 306 |
| AjnI | CCWGG | 1 cut(s) | 309 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 348, 380, 495, 527 |
| AluBI | AGCT | 1 cut(s) | 102 |
| AluI | AGCT | 1 cut(s) | 102 |
| Alw21I | GWGCWC | 1 cut(s) | 298 |
| Alw26I | GTCTC | 2 cut(s) | 7, 23 |
| Alw44I | GTGCAC | 1 cut(s) | 294 |
| AlwI | GGATC | 2 cut(s) | 255, 348 |
| ApaLI | GTGCAC | 1 cut(s) | 294 |
| ApoI | RAATTY | 1 cut(s) | 461 |
| AsuC2I | CCSGG | 1 cut(s) | 26 |
| BaeGI | GKGCMC | 1 cut(s) | 298 |
| Bbv12I | GWGCWC | 1 cut(s) | 298 |
| BciT130I | CCWGG | 1 cut(s) | 311 |
| BcnI | CCSGG | 1 cut(s) | 26 |
| BcoDI | GTCTC | 2 cut(s) | 7, 23 |
| BfaI | CTAG | 1 cut(s) | 387 |
| BmcAI | AGTACT | 1 cut(s) | 268 |
| Bme1390I | CCNGG | 2 cut(s) | 26, 311 |
| BmrFI | CCNGG | 2 cut(s) | 26, 311 |
| BmrI | ACTGGG | 1 cut(s) | 326 |
| BmuI | ACTGGG | 1 cut(s) | 326 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 256, 288 |
| BpuEI | CTTGAG | 1 cut(s) | 126 |
| BpuMI | CCSGG | 1 cut(s) | 26 |
| Bsa29I | ATCGAT | 2 cut(s) | 406, 410 |
| BsaBI | GATNNNNATC | 3 cut(s) | 48, 66, 406 |
| BsaI | GGTCTC | 1 cut(s) | 7 |
| BsaJI | CCNNGG | 2 cut(s) | 147, 310 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 337 |
| Bse1I | ACTGG | 1 cut(s) | 332 |
| Bse8I | GATNNNNATC | 3 cut(s) | 48, 66, 406 |
| BseBI | CCWGG | 1 cut(s) | 311 |
| BseCI | ATCGAT | 2 cut(s) | 406, 410 |
| BseDI | CCNNGG | 2 cut(s) | 147, 310 |
| BseGI | GGATG | 2 cut(s) | 165, 460 |
| BseJI | GATNNNNATC | 3 cut(s) | 48, 66, 406 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 337 |
| BseMII | CTCAG | 1 cut(s) | 219 |
| BseNI | ACTGG | 1 cut(s) | 332 |
| BseSI | GKGCMC | 1 cut(s) | 298 |
| Bsh1285I | CGRYCG | 1 cut(s) | 410 |
| BshVI | ATCGAT | 2 cut(s) | 406, 410 |
| BsiEI | CGRYCG | 1 cut(s) | 410 |
| BsiHKAI | GWGCWC | 1 cut(s) | 298 |
| BsiSI | CCGG | 1 cut(s) | 26 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 337 |
| BsmAI | GTCTC | 2 cut(s) | 7, 23 |
| BsmBI | CGTCTC | 1 cut(s) | 23 |
| BsmI | GAATGC | 1 cut(s) | 113 |
| Bso31I | GGTCTC | 1 cut(s) | 7 |
| Bsp1286I | GDGCHC | 1 cut(s) | 298 |
| Bsp143I | GATC | 6 cut(s) | 49, 67, 247, 340, 407, 411 |
| BspCNI | CTCAG | 1 cut(s) | 218 |
| BspDI | ATCGAT | 2 cut(s) | 406, 410 |
| BspHI | TCATGA | 2 cut(s) | 70, 414 |
| BspPI | GGATC | 2 cut(s) | 255, 348 |
| BspTNI | GGTCTC | 1 cut(s) | 7 |
| BsrI | ACTGG | 1 cut(s) | 332 |
| BssECI | CCNNGG | 2 cut(s) | 147, 310 |
| BssMI | GATC | 6 cut(s) | 49, 67, 247, 340, 407, 411 |
| BssT1I | CCWWGG | 1 cut(s) | 147 |
| Bst2UI | CCWGG | 1 cut(s) | 311 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 446 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 1 cut(s) | 205 |
| BstF5I | GGATG | 2 cut(s) | 165, 460 |
| BstKTI | GATC | 6 cut(s) | 52, 70, 250, 343, 410, 414 |
| BstMAI | GTCTC | 2 cut(s) | 7, 23 |
| BstMBI | GATC | 6 cut(s) | 49, 67, 247, 340, 407, 411 |
| BstMCI | CGRYCG | 1 cut(s) | 410 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 108, 117 |
| BstNI | CCWGG | 1 cut(s) | 311 |
| BstSCI | CCNGG | 2 cut(s) | 24, 309 |
| BstSLI | GKGCMC | 1 cut(s) | 298 |
| Bsu15I | ATCGAT | 2 cut(s) | 406, 410 |
| BsuTUI | ATCGAT | 2 cut(s) | 406, 410 |
| BtgZI | GCGATG | 1 cut(s) | 57 |
| BtsCI | GGATG | 2 cut(s) | 165, 460 |
| BtsIMutI | CAGTG | 1 cut(s) | 96 |
| CciI | TCATGA | 2 cut(s) | 70, 414 |
| ClaI | ATCGAT | 2 cut(s) | 406, 410 |
| Csp6I | GTAC | 3 cut(s) | 210, 267, 325 |
| CviAII | CATG | 4 cut(s) | 71, 160, 262, 415 |
| CviJI | RGCY | 7 cut(s) | 24, 102, 146, 185, 309, 317, 370 |
| CviKI_1 | RGCY | 7 cut(s) | 24, 102, 146, 185, 309, 317, 370 |
| CviQI | GTAC | 3 cut(s) | 210, 267, 325 |
| DdeI | CTNAG | 1 cut(s) | 205 |
| DpnI | GATC | 6 cut(s) | 51, 69, 249, 342, 409, 413 |
| DpnII | GATC | 6 cut(s) | 49, 67, 247, 340, 407, 411 |
| Eco130I | CCWWGG | 1 cut(s) | 147 |
| Eco31I | GGTCTC | 1 cut(s) | 7 |
| Eco32I | GATATC | 1 cut(s) | 404 |
| EcoRI | GAATTC | 1 cut(s) | 461 |
| EcoRII | CCWGG | 1 cut(s) | 309 |
| EcoRV | GATATC | 1 cut(s) | 404 |
| EcoT14I | CCWWGG | 1 cut(s) | 147 |
| ErhI | CCWWGG | 1 cut(s) | 147 |
| Esp3I | CGTCTC | 1 cut(s) | 23 |
| FaeI | CATG | 4 cut(s) | 74, 163, 265, 418 |
| FaiI | YATR | 8 cut(s) | 72, 161, 257, 263, 288, 397, 416, 530 |
| FatI | CATG | 4 cut(s) | 70, 159, 261, 414 |
| FokI | GGATG | 2 cut(s) | 152, 467 |
| FspBI | CTAG | 1 cut(s) | 387 |
| HapII | CCGG | 1 cut(s) | 26 |
| Hin1II | CATG | 4 cut(s) | 74, 163, 265, 418 |
| HinfI | GANTC | 4 cut(s) | 5, 74, 390, 421 |
| HpaII | CCGG | 1 cut(s) | 26 |
| Hpy166II | GTNNAC | 2 cut(s) | 132, 296 |
| Hpy188I | TCNGA | 3 cut(s) | 59, 345, 467 |
| Hpy188III | TCNNGA | 2 cut(s) | 71, 415 |
| Hpy8I | GTNNAC | 2 cut(s) | 132, 296 |
| HpyAV | CCTTC | 1 cut(s) | 462 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 446 |
| HpyCH4V | TGCA | 3 cut(s) | 111, 120, 296 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 108, 117 |
| HpyF3I | CTNAG | 1 cut(s) | 205 |
| Hsp92II | CATG | 4 cut(s) | 74, 163, 265, 418 |
| Kzo9I | GATC | 6 cut(s) | 49, 67, 247, 340, 407, 411 |
| LpnPI | CCDG | 8 cut(s) | 39, 63, 157, 192, 296, 306, 323, 345 |
| MaeI | CTAG | 1 cut(s) | 387 |
| MaeIII | GTNAC | 2 cut(s) | 155, 440 |
| MalI | GATC | 6 cut(s) | 51, 69, 249, 342, 409, 413 |
| MboI | GATC | 6 cut(s) | 49, 67, 247, 340, 407, 411 |
| MboII | GAAGA | 1 cut(s) | 59 |
| MhlI | GDGCHC | 1 cut(s) | 298 |
| MluCI | AATT | 4 cut(s) | 223, 300, 349, 461 |
| MnlI | CCTC | 3 cut(s) | 117, 146, 238 |
| MseI | TTAA | 1 cut(s) | 222 |
| MslI | CAYNNNNRTG | 1 cut(s) | 260 |
| MspI | CCGG | 1 cut(s) | 26 |
| MspR9I | CCNGG | 2 cut(s) | 26, 311 |
| Mva1269I | GAATGC | 1 cut(s) | 113 |
| MvaI | CCWGG | 1 cut(s) | 311 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 108, 117 |
| NciI | CCSGG | 1 cut(s) | 26 |
| NdeII | GATC | 6 cut(s) | 49, 67, 247, 340, 407, 411 |
| NlaIII | CATG | 4 cut(s) | 74, 163, 265, 418 |
| NmuCI | GTSAC | 2 cut(s) | 155, 440 |
| PagI | TCATGA | 2 cut(s) | 70, 414 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 416 |
| PctI | GAATGC | 1 cut(s) | 113 |
| PfeI | GAWTC | 4 cut(s) | 5, 74, 390, 421 |
| Ple19I | CGATCG | 1 cut(s) | 410 |
| Psp6I | CCWGG | 1 cut(s) | 309 |
| PspGI | CCWGG | 1 cut(s) | 309 |
| PvuI | CGATCG | 1 cut(s) | 410 |
| RsaI | GTAC | 3 cut(s) | 211, 268, 326 |
| RsaNI | GTAC | 3 cut(s) | 210, 267, 325 |
| RseI | CAYNNNNRTG | 1 cut(s) | 260 |
| SaqAI | TTAA | 1 cut(s) | 222 |
| Sau3AI | GATC | 6 cut(s) | 49, 67, 247, 340, 407, 411 |
| ScaI | AGTACT | 1 cut(s) | 268 |
| ScrFI | CCNGG | 2 cut(s) | 26, 311 |
| SduI | GDGCHC | 1 cut(s) | 298 |
| SetI | ASST | 6 cut(s) | 82, 104, 157, 211, 388, 442 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 260 |
| SmlI | CTYRAG | 1 cut(s) | 141 |
| SmoI | CTYRAG | 1 cut(s) | 141 |
| Sse9I | AATT | 4 cut(s) | 223, 300, 349, 461 |
| SspMI | CTAG | 1 cut(s) | 387 |
| StyD4I | CCNGG | 2 cut(s) | 24, 309 |
| StyI | CCWWGG | 1 cut(s) | 147 |
| TaaI | ACNGT | 2 cut(s) | 91, 446 |
| TaqI | TCGA | 4 cut(s) | 239, 406, 410, 508 |
| TaqII | GACCGA | 1 cut(s) | 195 |
| TasI | AATT | 4 cut(s) | 223, 300, 349, 461 |
| TatI | WGTACW | 1 cut(s) | 266 |
| TfiI | GAWTC | 4 cut(s) | 5, 74, 390, 421 |
| Tru1I | TTAA | 1 cut(s) | 222 |
| Tru9I | TTAA | 1 cut(s) | 222 |
| TscAI | CASTG | 1 cut(s) | 96 |
| TseFI | GTSAC | 2 cut(s) | 155, 440 |
| Tsp45I | GTSAC | 2 cut(s) | 155, 440 |
| TspDTI | ATGAA | 6 cut(s) | 60, 176, 362, 413, 474, 504 |
| TspGWI | ACGGA | 1 cut(s) | 414 |
| TspRI | CASTG | 1 cut(s) | 96 |
| VneI | GTGCAC | 1 cut(s) | 294 |
| XapI | RAATTY | 1 cut(s) | 461 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 317 |
| XspI | CTAG | 1 cut(s) | 387 |
| ZrmI | AGTACT | 1 cut(s) | 268 |