AT3G55060

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0003790
Physical Location & Seq
Reverse (-)
20402963 .. 20407103
4141 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G55060.2

Sequence Viewer

Length: 2691 bp
ATGAAAAAGCTCTTCTTTTTCAGATCTTCTGGTAATGGAAATGATAAACAAGTTAACTGCGAAAAAGAAGCGGATAGTAAGATGAGAACCCAAGCTAGTAGTCAGGCTGAACAAGAGTTCGATAGTCCTAAGTCACATGGTCAAGTTTCTGGTGGTCTAGCTCTTAGACGAAGCCTTTCATGGTCCTCTGCAGGTTTCCTTTTTGACAAGTTTGGAGAAACTTCCAAGAATGAACTAACAACTAGTGCTACTAAAAGCAAGGATAGGCGGCGCAATCATTCATCTCGATGCTTTACTCCAGAAAGACAAGTTAGAGAAAGGCAGTGTAAAGCAGACAAGTTTCAGCATGATTCGTCTGGGAGTTCATCATCTTGTTCGAGTAATGTCTCTAGTAAAGTTCTGGACCGTTATATTGATGGAGAAGAGCATTTGGAACCGTGCAAGCAAAAGAGTAATTCTTCACACAGTGGTGTTTCTGAGAGTATAAATCGAAGGAGGCTTCCACCCCGAGTTCAATGGACAGTCCCTACATCACCATCAGACACTTTCGATGAGAAACGAAAGTCCCAGTCATTTAGAGAAGCTAAAGGCACCCATTTACGTTACTCTTCTGCTGATTGTGTGGATAATGGGTTGCGGCATGGATCGCCTCGTTCGGTTGCTAGAAATGTCATTGAAAGACTCTCTCAGACTCATGGCAAGTCAAAGGGTTCAAACCACGAACCAATCACAATTCAAGATGTCTATGGTGGATCCCTTAACAGAACTTTTGACTCGAGCTCAGATATCGCCGCTAATGTTTCACTAGCTGAACATTATGAACCTGTTAACGAGTATTATACGCAGGACTATGGAGGGCACCAGCAAAATTGTATACGGAGTAGGAACGTGTACAAGTGTATGGAAGACGATCTTGACTCCGAGCTAGAAATGAAAATTAAAGAAGCTGAGAAGAGAGCTAAATTGTTTTCTGCAGAATTGGAGCAGCAGAGATGCCTTTCAGACTGTGACTTCGATGTTTCATCTTTGGTTGGGGCAATTAGAAAACTGGAAGATGAGAGGCTCCACTTGGCATTTGAGAATGTAAATCTCTTACGGTCCCAAATAGTTGAGAGGGCTTCTGCTAGGGAAGAAATCAGATGGTTGAAGTCAGATTGGGACTTGCATATACAGAGACTAGAAAAGGAGAAGAGCGAGCTGCAGGCTGGATTGGAGAAAGAGCTTGATAGAAGATCAGGTGAGTGGACGTCAAAACTCGAAAAATTCCAGCTTGAAGAGAAGAAGCTCCGAGAGCGTGTAAGAGAGCTTGCTGAGCATAATGTCTCACTCCAGAGAGAACTATCTGCTTTCCACGAAAATGAGACAGAGAACAAAGACATGATAACACATTTGGAGAGAAGAGTTGCTGAGCTGACCACAACAGCAGATAAATTGCATGAAGAGAACAATTATGTTAAACAAACTCTCTCCAAGTTACAAGAGAGTTACGCAGGTGCTACAGAAGATCTTGATTTCTTGAGAAGAAACTTTGAAGAGAAGGATCAAGAATGCAGGGAGTTGCACAAATCTGTTACAAAGTTTTTCAGAACTTGCAAAGAACAAGGGAAGACAATTGAGGGACTTCGAGATGGTGTTTCTGAGGAGGTTAAGAAGCAACCGTCAGAGAAATTAGACCAGTTGGTCAAGAAATTGCAGGTCGAGCAGGTAAGGTTGACAGGGATCGAGCTTTCACTTAGAAGGGAAGTAGAATCAATGAAGCTTGAAACTGACTCTCTTCGCCATGAAAATATCTGTCTACTGAATCGATTGAAAGGGAATGGTCAAGAAATAGACATTACAACCCTTAAGCTAGAGAATGAGTTGAAGATGCGTGTCTGCTACTTGCAAGAACAGGGACTGTCAATGTTAAATGAGAGCAGCCAGCTGTGTTACAAGTTACTGAAGTTCATCAAAGGGAAATTAACTCAGCTTCCTGAAACCTATCAGGATAAGAATTCAGTGAAGGACGGATTAAGTGAGCAGTTTATGATTGAGTCTGAAATGAAAGTCCATGGGATAAGGCGCGGAACTGAAAACCTGAAGAGGAGTTTGCAAACGGTGACCAGTGTGGTAGCTTCGAATTCAGAATCGTCTTCCTCAAATACTGGTAGGCCTAGGGAACAAAGAAACCAATCAGTTGAAGAAAACTTGCGAGCAGAACTGAGTGCTGAGACCCTAATCACAAGTTTAGTGCGGGAGAAACTGTATTCCAAGGAAAAGGAAATCGAACAGCTCCAAGCAGAACTAGCAGCAGCAGTACGAGGTAATGAGATTCTGAGATGTGAGGTCCAAAGCAGTTTAGACAACCTATCAGTTACAACCCACGAACTGAAAGACCTCAAGCATCAGATGTTGAAGAAGGAGGAAAGCATAAGACGGCTCGAAAGCAATCTCCAGGAAGCGGCGAAAGAAATGGCGAGGCTGAACGCACTATTGTCAAAAGTGTCTAATGAAAGAGGCCAGATATGGAGTGAGTATAAACAATACGGTGAGAAAAACATGCTTTTGAACTCAGAGAACGAGACATTGAAAGGAATGGTAGAGAAATTGGAGGAGAAGGTATTAGAGAAAGAAGGAGAGATCACAATACTACAAGACACAATCGGAAGCAAGCATCTGAATCTCCTCTCAAGTCCTGATTTCTTGGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

896

Amino Acids

102.87

Weight (kDa)

6.43

Isoelectric Point (pI)

55.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7653 PF24670 577 - 707 2.6e-48 Domain of unknown function (DUF7653)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1481
AasI GACNNNNNNGTC 1 cut(s) 1679
AatII GACGTC 1 cut(s) 1250
Acc36I ACCTGC 4 cut(s) 182, 1481, 1684, 1693
AccB1I GGYRCC 2 cut(s) 590, 858
AccI GTMKAC 2 cut(s) 874, 1795
AccII CGCG 1 cut(s) 2064
AciI CCGC 7 cut(s) 71, 268, 637, 792, 2064, 2233, 2441
AclWI GGATC 5 cut(s) 652, 747, 760, 1548, 1727
AcsI RAATTY 3 cut(s) 1262, 1993, 2119
AcuI CTGAAG 2 cut(s) 1961, 2099
AcyI GRCGYC 1 cut(s) 1247
AdeI CACNNNGTG 1 cut(s) 467
AfaI GTAC 2 cut(s) 893, 2298
AfiI CCNNNNNNNGG 1 cut(s) 2440
AflII CTTAAG 1 cut(s) 1844
AflIII ACRYGT 1 cut(s) 888
AhlI ACTAGT 1 cut(s) 242
AjnI CCWGG 1 cut(s) 2433
AleI CACNNNNGTG 1 cut(s) 468
Alw21I GWGCWC 1 cut(s) 782
Alw26I GTCTC 6 cut(s) 391, 1168, 1327, 1355, 2204, 2555
AlwI GGATC 5 cut(s) 652, 747, 760, 1548, 1727
AlwNI CAGNNNCTG 1 cut(s) 1897
Ama87I CYCGRG 2 cut(s) 507, 775
AoxI GGCC 2 cut(s) 2150, 2497
ApeKI GCWGC 5 cut(s) 985, 1198, 1917, 2288, 2291
ApoI RAATTY 3 cut(s) 1262, 1993, 2119
ArsI GACNNNNNNTTYG 2 cut(s) 995, 1027
Asp700I GAANNNNTTC 1 cut(s) 175
AspA2I CCTAGG 1 cut(s) 2153
AspLEI GCGC 2 cut(s) 273, 2064
AspS9I GGNCC 4 cut(s) 183, 403, 1098, 2326
AsuHPI GGTGA 4 cut(s) 525, 1250, 2110, 2540
AsuII TTCGAA 1 cut(s) 2117
AvaI CYCGRG 2 cut(s) 507, 775
AvaII GGWCC 4 cut(s) 183, 403, 1098, 2326
AvrII CCTAGG 1 cut(s) 2153
BaeGI GKGCMC 1 cut(s) 861
BamHI GGATCC 1 cut(s) 752
BanI GGYRCC 2 cut(s) 590, 858
BanII GRGCYC 1 cut(s) 782
BbsI GAAGAC 3 cut(s) 912, 1613, 2124
Bbv12I GWGCWC 1 cut(s) 782
BbvI GCAGC 5 cut(s) 997, 1185, 1929, 2300, 2303
BccI CCATC 4 cut(s) 410, 544, 1134, 1622
BceAI ACGGC 1 cut(s) 2432
BciT130I CCWGG 1 cut(s) 2435
BcoDI GTCTC 6 cut(s) 391, 1168, 1327, 1355, 2204, 2555
BcuI ACTAGT 1 cut(s) 242
BfmI CTRYAG 4 cut(s) 189, 972, 1199, 1497
BfrI CTTAAG 1 cut(s) 1844
BfuAI ACCTGC 4 cut(s) 182, 1481, 1684, 1693
BglII AGATCT 2 cut(s) 23, 1504
BisI GCNGC 9 cut(s) 269, 638, 792, 986, 1199, 1918, 2289, 2292, 2442
BlnI CCTAGG 1 cut(s) 2153
BlpI GCTNAGC 2 cut(s) 1311, 1407
BlsI GCNGC 9 cut(s) 270, 639, 793, 987, 1200, 1919, 2290, 2293, 2443
Bme1390I CCNGG 1 cut(s) 2435
Bme18I GGWCC 4 cut(s) 183, 403, 1098, 2326
BmeT110I CYCGRG 2 cut(s) 507, 775
BmgT120I GGNCC 4 cut(s) 183, 403, 1098, 2326
BmiI GGNNCC 6 cut(s) 435, 592, 754, 860, 1064, 1100
BmrFI CCNGG 1 cut(s) 2435
BmrI ACTGGG 1 cut(s) 562
BmsI GCATC 5 cut(s) 278, 983, 1857, 2392, 2662
BmuI ACTGGG 1 cut(s) 562
BpiI GAAGAC 3 cut(s) 912, 1613, 2124
BpmI CTGGAG 3 cut(s) 282, 1313, 2417
Bpu1102I GCTNAGC 2 cut(s) 1311, 1407
Bpu14I TTCGAA 1 cut(s) 2117
BpuEI CTTGAG 3 cut(s) 1537, 2363, 2653
Bsa29I ATCGAT 1 cut(s) 1804
BsaHI GRCGYC 1 cut(s) 1247
BsaI GGTCTC 1 cut(s) 2204
BsaJI CCNNGG 3 cut(s) 2050, 2153, 2250
BsaXI ACNNNNNCTCC 2 cut(s) 2228, 2258
Bsc4I CCNNNNNNNGG 1 cut(s) 2440
Bse1I ACTGG 5 cut(s) 568, 1053, 1675, 2103, 2149
BseBI CCWGG 1 cut(s) 2435
BseCI ATCGAT 1 cut(s) 1804
BseDI CCNNGG 3 cut(s) 2050, 2153, 2250
BseLI CCNNNNNNNGG 1 cut(s) 2440
BseNI ACTGG 5 cut(s) 568, 1053, 1675, 2103, 2149
BseRI GAGGAG 4 cut(s) 1655, 2098, 2606, 2654
BseSI GKGCMC 1 cut(s) 861
BseXI GCAGC 5 cut(s) 997, 1185, 1929, 2300, 2303
Bsh1236I CGCG 1 cut(s) 2064
BshFI GGCC 2 cut(s) 2152, 2499
BshNI GGYRCC 2 cut(s) 590, 858
BshVI ATCGAT 1 cut(s) 1804
BsiHKAI GWGCWC 1 cut(s) 782
BsiHKCI CYCGRG 2 cut(s) 507, 775
BslFI GGGAC 6 cut(s) 509, 550, 1084, 1172, 1632, 1908
BslI CCNNNNNNNGG 1 cut(s) 2440
BsmAI GTCTC 6 cut(s) 391, 1168, 1327, 1355, 2204, 2555
BsmFI GGGAC 6 cut(s) 509, 550, 1084, 1172, 1632, 1908
BsmI GAATGC 1 cut(s) 1553
BsnI GGCC 2 cut(s) 2152, 2499
Bso31I GGTCTC 1 cut(s) 2204
BsoBI CYCGRG 2 cut(s) 507, 775
Bsp119I TTCGAA 1 cut(s) 2117
Bsp1286I GDGCHC 2 cut(s) 782, 861
Bsp1407I TGTACA 1 cut(s) 891
Bsp143I GATC 9 cut(s) 23, 644, 752, 910, 1232, 1504, 1540, 1719, 2619
Bsp1720I GCTNAGC 2 cut(s) 1311, 1407
Bsp19I CCATGG 1 cut(s) 2050
BspACI CCGC 7 cut(s) 71, 268, 637, 792, 2064, 2233, 2441
BspANI GGCC 2 cut(s) 2152, 2499
BspDI ATCGAT 1 cut(s) 1804
BspFNI CGCG 1 cut(s) 2064
BspLI GGNNCC 6 cut(s) 435, 592, 754, 860, 1064, 1100
BspMAI CTGCAG 3 cut(s) 193, 976, 1203
BspMI ACCTGC 4 cut(s) 182, 1481, 1684, 1693
BspPI GGATC 5 cut(s) 652, 747, 760, 1548, 1727
BspQI GCTCTTC 3 cut(s) 17, 417, 1184
BspT104I TTCGAA 1 cut(s) 2117
BspT107I GGYRCC 2 cut(s) 590, 858
BspTI CTTAAG 1 cut(s) 1844
BspTNI GGTCTC 1 cut(s) 2204
BsrGI TGTACA 1 cut(s) 891
BsrI ACTGG 5 cut(s) 568, 1053, 1675, 2103, 2149
BssECI CCNNGG 3 cut(s) 2050, 2153, 2250
BssMI GATC 9 cut(s) 23, 644, 752, 910, 1232, 1504, 1540, 1719, 2619
BssNAI GTATAC 1 cut(s) 875
BssNI GRCGYC 1 cut(s) 1247
BssT1I CCWWGG 3 cut(s) 2050, 2153, 2250
Bst1107I GTATAC 1 cut(s) 875
Bst2UI CCWGG 1 cut(s) 2435
BstACI GRCGYC 1 cut(s) 1247
BstAFI CTTAAG 1 cut(s) 1844
BstAUI TGTACA 1 cut(s) 891
BstBI TTCGAA 1 cut(s) 2117
BstC8I GCNNGC 7 cut(s) 443, 1196, 1203, 1308, 1922, 2193, 2651
BstDSI CCRYGG 1 cut(s) 2050
BstEII GGTNACC 1 cut(s) 2098
BstFNI CGCG 1 cut(s) 2064
BstHHI GCGC 2 cut(s) 273, 2064
BstKTI GATC 9 cut(s) 26, 647, 755, 913, 1235, 1507, 1543, 1722, 2622
BstMAI GTCTC 6 cut(s) 391, 1168, 1327, 1355, 2204, 2555
BstMBI GATC 9 cut(s) 23, 644, 752, 910, 1232, 1504, 1540, 1719, 2619
BstMWI GCNNNNNNNGC 5 cut(s) 646, 1291, 1312, 1699, 2285
BstNI CCWGG 1 cut(s) 2435
BstNSI RCATGY 1 cut(s) 2542
BstPI GGTNACC 1 cut(s) 2098
BstSCI CCNGG 1 cut(s) 2433
BstSFI CTRYAG 4 cut(s) 189, 972, 1199, 1497
BstSLI GKGCMC 1 cut(s) 861
BstUI CGCG 1 cut(s) 2064
BstV1I GCAGC 5 cut(s) 997, 1185, 1929, 2300, 2303
BstV2I GAAGAC 3 cut(s) 912, 1613, 2124
BstX2I RGATCY 3 cut(s) 23, 752, 1504
BstYI RGATCY 3 cut(s) 23, 752, 1504
BstZ17I GTATAC 1 cut(s) 875
Bsu15I ATCGAT 1 cut(s) 1804
BsuRI GGCC 2 cut(s) 2152, 2499
BsuTUI ATCGAT 1 cut(s) 1804
BtgI CCRYGG 1 cut(s) 2050
BtsI GCAGTG 1 cut(s) 329
BtsIMutI CAGTG 4 cut(s) 329, 472, 2004, 2110
BveI ACCTGC 4 cut(s) 182, 1481, 1684, 1693
Cac8I GCNNGC 7 cut(s) 443, 1196, 1203, 1308, 1922, 2193, 2651
CaiI CAGNNNCTG 1 cut(s) 1897
CfoI GCGC 2 cut(s) 273, 2064
Cfr13I GGNCC 4 cut(s) 183, 403, 1098, 2326
ClaI ATCGAT 1 cut(s) 1804
Csp6I GTAC 2 cut(s) 892, 2297
CviQI GTAC 2 cut(s) 892, 2297
DpnI GATC 9 cut(s) 25, 646, 754, 912, 1234, 1506, 1542, 1721, 2621
DpnII GATC 9 cut(s) 23, 644, 752, 910, 1232, 1504, 1540, 1719, 2619
DraIII CACNNNGTG 1 cut(s) 467
DrdI GACNNNNNNGTC 1 cut(s) 1679
DseDI GACNNNNNNGTC 1 cut(s) 1679
Ecl136II GAGCTC 1 cut(s) 780
Eco130I CCWWGG 3 cut(s) 2050, 2153, 2250
Eco147I AGGCCT 1 cut(s) 2152
Eco24I GRGCYC 1 cut(s) 782
Eco31I GGTCTC 1 cut(s) 2204
Eco32I GATATC 1 cut(s) 787
Eco47I GGWCC 4 cut(s) 183, 403, 1098, 2326
Eco53kI GAGCTC 1 cut(s) 780
Eco57I CTGAAG 2 cut(s) 1961, 2099
Eco88I CYCGRG 2 cut(s) 507, 775
Eco91I GGTNACC 1 cut(s) 2098
EcoICRI GAGCTC 1 cut(s) 780
EcoO65I GGTNACC 1 cut(s) 2098
EcoRI GAATTC 2 cut(s) 1993, 2119
EcoRII CCWGG 1 cut(s) 2433
EcoRV GATATC 1 cut(s) 787
EcoT14I CCWWGG 3 cut(s) 2050, 2153, 2250
EcoT38I GRGCYC 1 cut(s) 782
ErhI CCWWGG 3 cut(s) 2050, 2153, 2250
FalI AAGNNNNNCTT 3 cut(s) 31, 897, 929
FaqI GGGAC 6 cut(s) 509, 550, 1084, 1172, 1632, 1908
FauI CCCGC 1 cut(s) 2226
FblI GTMKAC 2 cut(s) 874, 1795
Fnu4HI GCNGC 9 cut(s) 269, 638, 792, 986, 1199, 1918, 2289, 2292, 2442
FriOI GRGCYC 1 cut(s) 782
Fsp4HI GCNGC 9 cut(s) 269, 638, 792, 986, 1199, 1918, 2289, 2292, 2442
GlaI GCGC 2 cut(s) 272, 2063
GluI GCNGC 9 cut(s) 269, 638, 792, 986, 1199, 1918, 2289, 2292, 2442
GsuI CTGGAG 3 cut(s) 282, 1313, 2417
HaeIII GGCC 2 cut(s) 2152, 2499
HhaI GCGC 2 cut(s) 273, 2064
Hin1I GRCGYC 1 cut(s) 1247
Hin6I GCGC 2 cut(s) 271, 2062
HinP1I GCGC 2 cut(s) 271, 2062
HincII GTYRAC 3 cut(s) 55, 829, 1713
HindII GTYRAC 3 cut(s) 55, 829, 1713
HindIII AAGCTT 1 cut(s) 1757
HpaI GTTAAC 2 cut(s) 55, 829
HphI GGTGA 4 cut(s) 525, 1250, 2110, 2540
Hpy166II GTNNAC 7 cut(s) 55, 829, 875, 892, 1245, 1713, 1796
Hpy8I GTNNAC 7 cut(s) 55, 829, 875, 892, 1245, 1713, 1796
HpyAV CCTTC 7 cut(s) 486, 1531, 1731, 1996, 2392, 2590, 2606
HpyCH4IV ACGT 3 cut(s) 601, 888, 1247
HpyF10VI GCNNNNNNNGC 5 cut(s) 646, 1291, 1312, 1699, 2285
HpySE526I ACGT 3 cut(s) 601, 888, 1247
Hsp92I GRCGYC 1 cut(s) 1247
HspAI GCGC 2 cut(s) 271, 2062
KspAI GTTAAC 2 cut(s) 55, 829
Kzo9I GATC 9 cut(s) 23, 644, 752, 910, 1232, 1504, 1540, 1719, 2619
LguI GCTCTTC 3 cut(s) 17, 417, 1184
LmnI GCTCC 4 cut(s) 982, 1068, 1290, 2277
Lsp1109I GCAGC 5 cut(s) 997, 1185, 1929, 2300, 2303
LweI GCATC 5 cut(s) 278, 983, 1857, 2392, 2662
MaeII ACGT 3 cut(s) 601, 888, 1247
MalI GATC 9 cut(s) 25, 646, 754, 912, 1234, 1506, 1542, 1721, 2621
MboI GATC 9 cut(s) 23, 644, 752, 910, 1232, 1504, 1540, 1719, 2619
MfeI CAATTG 1 cut(s) 1611
MflI RGATCY 3 cut(s) 23, 752, 1504
MhlI GDGCHC 2 cut(s) 782, 861
MlyI GAGTC 6 cut(s) 675, 685, 767, 911, 1763, 2042
MroXI GAANNNNTTC 1 cut(s) 175
MslI CAYNNNNRTG 3 cut(s) 286, 468, 1356
MspA1I CMGCKG 1 cut(s) 1924
MspCI CTTAAG 1 cut(s) 1844
MspR9I CCNGG 1 cut(s) 2435
MunI CAATTG 1 cut(s) 1611
Mva1269I GAATGC 1 cut(s) 1553
MvaI CCWGG 1 cut(s) 2435
MvnI CGCG 1 cut(s) 2064
MwoI GCNNNNNNNGC 5 cut(s) 646, 1291, 1312, 1699, 2285
NcoI CCATGG 1 cut(s) 2050
NdeII GATC 9 cut(s) 23, 644, 752, 910, 1232, 1504, 1540, 1719, 2619
NlaIV GGNNCC 6 cut(s) 435, 592, 754, 860, 1064, 1100
NmuCI GTSAC 3 cut(s) 132, 1007, 2098
NspI RCATGY 1 cut(s) 2542
NspV TTCGAA 1 cut(s) 2117
OliI CACNNNNGTG 1 cut(s) 468
PaeR7I CTCGAG 1 cut(s) 775
PaqCI CACCTGC 1 cut(s) 1481
PceI AGGCCT 1 cut(s) 2152
PciSI GCTCTTC 3 cut(s) 17, 417, 1184
PctI GAATGC 1 cut(s) 1553
PdmI GAANNNNTTC 1 cut(s) 175
PfeI GAWTC 6 cut(s) 350, 1748, 1801, 2126, 2311, 2659
PfoI TCCNGGA 1 cut(s) 2433
PkrI GCNGC 9 cut(s) 270, 639, 793, 987, 1200, 1919, 2290, 2293, 2443
PleI GAGTC 6 cut(s) 675, 685, 767, 911, 1763, 2041
PpsI GAGTC 6 cut(s) 675, 685, 767, 911, 1763, 2041
Psp124BI GAGCTC 1 cut(s) 782
Psp6I CCWGG 1 cut(s) 2433
PspEI GGTNACC 1 cut(s) 2098
PspGI CCWGG 1 cut(s) 2433
PspN4I GGNNCC 6 cut(s) 435, 592, 754, 860, 1064, 1100
PspPI GGNCC 4 cut(s) 183, 403, 1098, 2326
PspXI VCTCGAGB 1 cut(s) 775
PstI CTGCAG 3 cut(s) 193, 976, 1203
PstNI CAGNNNCTG 1 cut(s) 1897
PsuI RGATCY 3 cut(s) 23, 752, 1504
PvuII CAGCTG 1 cut(s) 1924
RsaI GTAC 2 cut(s) 893, 2298
RsaNI GTAC 2 cut(s) 892, 2297
RseI CAYNNNNRTG 3 cut(s) 286, 468, 1356
SacI GAGCTC 1 cut(s) 782
SapI GCTCTTC 3 cut(s) 17, 417, 1184
SatI GCNGC 9 cut(s) 269, 638, 792, 986, 1199, 1918, 2289, 2292, 2442
Sau3AI GATC 9 cut(s) 23, 644, 752, 910, 1232, 1504, 1540, 1719, 2619
Sau96I GGNCC 4 cut(s) 183, 403, 1098, 2326
SchI GAGTC 6 cut(s) 675, 685, 767, 911, 1763, 2042
ScrFI CCNGG 1 cut(s) 2435
SduI GDGCHC 2 cut(s) 782, 861
SfaNI GCATC 5 cut(s) 278, 983, 1857, 2392, 2662
SfcI CTRYAG 4 cut(s) 189, 972, 1199, 1497
Sfr274I CTCGAG 1 cut(s) 775
SfuI TTCGAA 1 cut(s) 2117
SinI GGWCC 4 cut(s) 183, 403, 1098, 2326
SlaI CTCGAG 1 cut(s) 775
SmiMI CAYNNNNRTG 3 cut(s) 286, 468, 1356
SmlI CTYRAG 5 cut(s) 775, 1516, 1844, 2378, 2668
SmoI CTYRAG 5 cut(s) 775, 1516, 1844, 2378, 2668
SpeI ACTAGT 1 cut(s) 242
SseBI AGGCCT 1 cut(s) 2152
SsiI CCGC 7 cut(s) 71, 268, 637, 792, 2064, 2233, 2441
SstI GAGCTC 1 cut(s) 782
StuI AGGCCT 1 cut(s) 2152
StyD4I CCNGG 1 cut(s) 2433
StyI CCWWGG 3 cut(s) 2050, 2153, 2250
TaiI ACGT 3 cut(s) 604, 891, 1250
TatI WGTACW 1 cut(s) 891
TauI GCSGC 4 cut(s) 271, 640, 794, 2444
TfiI GAWTC 6 cut(s) 350, 1748, 1801, 2126, 2311, 2659
TscAI CASTG 4 cut(s) 329, 472, 2004, 2110
TseFI GTSAC 3 cut(s) 132, 1007, 2098
TseI GCWGC 5 cut(s) 985, 1198, 1917, 2288, 2291
Tsp45I GTSAC 3 cut(s) 132, 1007, 2098
TspGWI ACGGA 2 cut(s) 892, 2022
TspRI CASTG 4 cut(s) 329, 472, 2004, 2110
Vha464I CTTAAG 1 cut(s) 1844
VpaK11BI GGWCC 4 cut(s) 183, 403, 1098, 2326
XapI RAATTY 3 cut(s) 1262, 1993, 2119
XceI RCATGY 1 cut(s) 2542
XhoI CTCGAG 1 cut(s) 775
XmaJI CCTAGG 1 cut(s) 2153
XmiI GTMKAC 2 cut(s) 874, 1795
XmnI GAANNNNTTC 1 cut(s) 175
ZraI GACGTC 1 cut(s) 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.