Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000112.1

Orthogroup ID

OG0003790

Physical Location & Seq

Genomic Coordinates Forward (+)

165491 .. 169096

Gene Structure 3606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000112.1_g000033.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2817 bp

atgaagaagctcttctttttcagatcttctgcttctagcaatggaaacaacaaatcccctccatcaactgataagcaagtatactgggaaaacccatcagaaaatggaagtcaagttggtgacattgctgataatagttttcaaagccctaaaggattcttttctaaatctcgaaagcaggtctctgctaacaagaattccagtgagagtccaggccttagaaggagccggtcattatcatcagcagccttccttgtaagtgagccggtgcaagcagaattttcttcttcgagatatcagagtagatctccttgtagtagtacaagtagtattcctcatcgacaatgtggccaatcatcttgttgtcggacttttacccctgagaggcatcaggctaaagagttagaagttccagctgttcaaaacacacacggattagaacgacctggttctgctggttctcctagaatacagcatggttcgtcagggagctcttctacttgctctagtaatgtctcatccaaagttttggaccgctatatagacggagagcaggaggaaaggggcagacaagagaacaattcttcccatagaaacttcaatgggattggaaacggtggtggatggcgccctccgcgagttcagattacagcccccagttcacccagggctcattcatttagagaggccaaaagttcccgttatcgtctatcatccaaagattgggtcgaaaatggatttggtcatgaatctcccaggagacttgcaaagaatgttgtggagaggctatcacagtctcatgtcatgcagccatcacatgcaaaggaatttgaccatgacatcccgctcaccattgaggatatatatggtagaccagacctggtaagccagaaaacttaccctttggacgaaccttatgacacaattagtaaatatcatggggatgattactcgagcttgcagaaacagttctatggagagaagtgtaatggtttaaactctgatgagactggagaggacctggatgtggaattacaaagaagactggaggaagctgaggagaaggtcatgcttctgtctgaagaacttgagcaggaaagctttcttagagatagtgggtacaatgtgccatcactgattcagacaattagaaacctaacagagcagagaatcagctttgcacttgaggtttcaaaccttcttcaattacgaattgctgagagggcctctgccaagaaagaattgagactggcaaacgcagaacttgagtctcgaaccagaagactagagaaggagaagaatgagttacagtcagcattggagacagaactagatcgaaggtcaactgactggtcactcaagctggacaaatatcagtcggaagagcagaggcttcgtgaacgagttagagagcttgcagaacaaaatgtctcgcttcagagagaagtttcttcttttaatgtgagggaaactgagagtacaagtttcataacaaatgcagagcaacagctgaaggggctcactactatgatggaggaaatgagagaggagaatcaaggcatacaagaaaatctctcggaattgcaagagaagtacagagcatcagaggaagatcgtgtttgtctccgtaagaattttgaaaagagggataaggagtgcaaggatttgcataaatccattacaagattattaagaacctgcagagaacaagagaagacaattgatgggttgcgtgaagcttttagtgaggagttcgggaaaaatcaatcatcagagaggtttgataagcatgtttcgaaattgcagatggagcaaatgaggttgacaggagtagaactggttttaaggagagagttggactctcaaaggcttgaagttgattctcttaggcatgagaatatacacttgttagaccgtttgaggggcaatgggaaagacagtggtgcgttaactttcaagctagataaggagatgtcggcgcgggtcggctgcttgcaaaatcaagggctatcactcctaaatgagagctcccagttgtgttcagattttctggaatttgtcaaaagaaaagcaggccatctccaagaagctaagaagggtttggatgcacaattttttgttgaatctgaaatgaaagtgcaggggttaaagcgtggaactgaaagcttaaccagaagtttgcagacaatgtctgctttgttccatgaaaagtccagtctggccgcatcaaaatatcaatctaagtgcatggatgctgacgaatcaggacattcaaatgatcaaatcccagaggacgatatgagatataagcttcaatcagaaactatacttacaagtttactaagagagaagatacattctaaagagctggaagttgagcagttgcaagctgaactagctgcagctgtaagaggaaatgacatccttagatgtgaagttcaaaatgcaatggacaacctttcctgtctcacccacaagttgaaagacgttgaactactgatgctcaagaaggatgataacataaacaagcttcaaagtgacctccaagaatctacaaaggaattaacagttacacgagggatgctgcctaaaatttcagaagagagagatatgatgtgggaggaggtgaaaaagtacaatgagaagaatatgctgttgaactcggaggttaatctgttgaagaagaagatagagacccttgatgaggaagtactcttcaaagaaggccagattacaatcctgaaagatacattagggaacaaaccgtttgatcttctagcgagtcctgataacacacgagaatttctggttcgatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

938

Amino Acids

107.24

Weight (kDa)

6.0

Isoelectric Point (pI)

59.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003790)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39300 AT2G39300 AT2G39300 AT2G39300 AT3G55060 AT3G55060 AT3G55060
fragaria_vesca	FvH4_7g20660 FvH4_7g20660 FvH4_7g20660 FvH4_7g20660 FvH4_7g20660 FvH4_7g20660 FvH4_7g20660
malus_domestica	MD07G1183400.v1.1
prunus_persica	Prupe.2G222100_v2.0.a1 Prupe.2G222100_v2.0.a1 Prupe.2G222100_v2.0.a1 Prupe.2G222100_v2.0.a1
pyrus_communis	pycom07g17600
rosa_chinensis	RchiOBHm_Chr1g0364701
rosa_laevigata	RLG00000027465
rosa_multiflora	Rmu_ssc0000112.1_g000033
rosa_roxburghii	Rroxscaffold_4G00291730 Rroxscaffold_4G00292160
rosa_rugosa	Rorug01G0317800 Rorug01G0317900 Rorug01G0318000 Rorug01G0318100
rosa_samantha	Rh1AG326800 Rh1BG288100 Rh1CG304800 Rh1DG319700
rosa_wichuraiana	Rw1G028950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	169, 1706
AccB1I	GGYRCC	1 cut(s)	627
AccB7I	CCANNNNNTGG	1 cut(s)	723
AccBSI	CCGCTC	1 cut(s)	847
AccI	GTMKAC	2 cut(s)	81, 871
AccII	CGCG	2 cut(s)	637, 1981
AciI	CCGC	5 cut(s)	535, 635, 845, 1981, 2223
AcoI	YGGCCR	2 cut(s)	349, 2220
AcsI	RAATTY	7 cut(s)	196, 278, 827, 1633, 2054, 2592, 2801
AcuI	CTGAAG	3 cut(s)	1101, 1421, 1532
AcyI	GRCGYC	1 cut(s)	628
AfaI	GTAC	6 cut(s)	322, 1121, 1480, 1595, 2636, 2712
AfiI	CCNNNNNNNGG	5 cut(s)	384, 723, 1027, 1921, 2704
AjnI	CCWGG	6 cut(s)	211, 445, 665, 755, 879, 1020
AjuI	GAANNNNNNNTTGG	2 cut(s)	723, 755
AloI	GAACNNNNNNTCC	2 cut(s)	569, 601
Alw21I	GWGCWC	2 cut(s)	494, 2030
Ama87I	CYCGRG	1 cut(s)	952
AoxI	GGCC	7 cut(s)	214, 349, 687, 1224, 2074, 2220, 2725
ApeKI	GCWGC	6 cut(s)	245, 808, 1989, 2399, 2402, 2584
ApoI	RAATTY	7 cut(s)	196, 278, 827, 1633, 2054, 2592, 2801
ArsI	GACNNNNNNTTYG	2 cut(s)	711, 743
Asp700I	GAANNNNTTC	3 cut(s)	11, 968, 1101
AspLEI	GCGC	2 cut(s)	630, 1981
AspS9I	GGNCC	3 cut(s)	532, 1018, 1224
AsuHPI	GGTGA	5 cut(s)	131, 654, 841, 2461, 2638
AsuII	TTCGAA	1 cut(s)	1796
AvaI	CYCGRG	1 cut(s)	952
AvaII	GGWCC	2 cut(s)	532, 1018
BalI	TGGCCA	1 cut(s)	351
BanI	GGYRCC	1 cut(s)	627
BanII	GRGCYC	4 cut(s)	494, 673, 1521, 2030
BauI	CACGAG	2 cut(s)	2574, 2796
BbsI	GAAGAC	3 cut(s)	1048, 1288, 1721
Bbv12I	GWGCWC	2 cut(s)	494, 2030
BbvCI	CCTCAGC	1 cut(s)	1056
BbvI	GCAGC	6 cut(s)	257, 820, 1976, 2386, 2414, 2571
BccI	CCATC	9 cut(s)	70, 103, 618, 820, 1138, 1525, 1718, 1801, 2085
BcgI	CGANNNNNNTGC	2 cut(s)	1376, 1410
BciT130I	CCWGG	6 cut(s)	213, 447, 667, 757, 881, 1022
BclI	TGATCA	1 cut(s)	2278
BfaI	CTAG	8 cut(s)	36, 465, 507, 1286, 1331, 1961, 2396, 2777
BfmI	CTRYAG	2 cut(s)	1699, 2400
BfoI	RGCGCY	1 cut(s)	631
BfuAI	ACCTGC	2 cut(s)	169, 1706
BglII	AGATCT	2 cut(s)	23, 305
BisI	GCNGC	7 cut(s)	246, 809, 1990, 2223, 2400, 2403, 2585
BlsI	GCNGC	7 cut(s)	247, 810, 1991, 2224, 2401, 2404, 2586
BmcAI	AGTACT	1 cut(s)	2712
Bme1390I	CCNGG	6 cut(s)	213, 447, 667, 757, 881, 1022
Bme18I	GGWCC	2 cut(s)	532, 1018
BmeT110I	CYCGRG	1 cut(s)	952
BmgT120I	GGNCC	3 cut(s)	532, 1018, 1224
BmiI	GGNNCC	2 cut(s)	227, 629
BmrFI	CCNGG	6 cut(s)	213, 447, 667, 757, 881, 1022
BmrI	ACTGGG	3 cut(s)	94, 651, 2026
BmsI	GCATC	7 cut(s)	397, 1610, 2095, 2234, 2242, 2490, 2571
BmuI	ACTGGG	3 cut(s)	94, 651, 2026
BpiI	GAAGAC	3 cut(s)	1048, 1288, 1721
BplI	GAGNNNNNCTC	6 cut(s)	292, 324, 1211, 1243, 1844, 1876
BpmI	CTGGAG	2 cut(s)	1032, 1067
Bpu10I	CCTNAGC	1 cut(s)	1056
Bpu14I	TTCGAA	1 cut(s)	1796
BpuEI	CTTGAG	5 cut(s)	1109, 1205, 1286, 1343, 2489
BsaBI	GATNNNNATC	1 cut(s)	2735
BsaHI	GRCGYC	1 cut(s)	628
BsaI	GGTCTC	2 cut(s)	187, 2687
BsaJI	CCNNGG	3 cut(s)	665, 666, 755
Bsc4I	CCNNNNNNNGG	5 cut(s)	384, 723, 1027, 1921, 2704
Bse118I	RCCGGY	2 cut(s)	228, 265
Bse3DI	GCAATG	4 cut(s)	46, 123, 1933, 2454
Bse8I	GATNNNNATC	1 cut(s)	2735
BseBI	CCWGG	6 cut(s)	213, 447, 667, 757, 881, 1022
BseDI	CCNNGG	3 cut(s)	665, 666, 755
BseJI	GATNNNNATC	1 cut(s)	2735
BseLI	CCNNNNNNNGG	5 cut(s)	384, 723, 1027, 1921, 2704
BseMI	GCAATG	4 cut(s)	46, 123, 1933, 2454
BseMII	CTCAG	4 cut(s)	372, 1047, 1209, 1464
BseRI	GAGGAG	4 cut(s)	1073, 1562, 1763, 2636
BseXI	GCAGC	6 cut(s)	257, 820, 1976, 2386, 2414, 2571
BsgI	GTGCAG	1 cut(s)	2159
Bsh1236I	CGCG	2 cut(s)	637, 1981
BshFI	GGCC	7 cut(s)	216, 351, 689, 1226, 2076, 2222, 2727
BshNI	GGYRCC	1 cut(s)	627
BsiHKAI	GWGCWC	2 cut(s)	494, 2030
BsiHKCI	CYCGRG	1 cut(s)	952
BsiSI	CCGG	2 cut(s)	229, 266
BslI	CCNNNNNNNGG	5 cut(s)	384, 723, 1027, 1921, 2704
BsnI	GGCC	7 cut(s)	216, 351, 689, 1226, 2076, 2222, 2727
Bso31I	GGTCTC	2 cut(s)	187, 2687
BsoBI	CYCGRG	1 cut(s)	952
Bsp119I	TTCGAA	1 cut(s)	1796
Bsp1286I	GDGCHC	4 cut(s)	494, 673, 1521, 2030
Bsp143I	GATC	6 cut(s)	23, 305, 1333, 1612, 2278, 2770
BspACI	CCGC	5 cut(s)	535, 635, 845, 1981, 2223
BspANI	GGCC	7 cut(s)	216, 351, 689, 1226, 2076, 2222, 2727
BspCNI	CTCAG	4 cut(s)	373, 1048, 1210, 1465
BspFNI	CGCG	2 cut(s)	637, 1981
BspHI	TCATGA	1 cut(s)	745
BspLI	GGNNCC	2 cut(s)	227, 629
BspMAI	CTGCAG	2 cut(s)	1703, 2404
BspMI	ACCTGC	2 cut(s)	169, 1706
BspQI	GCTCTTC	3 cut(s)	17, 499, 1377
BspT104I	TTCGAA	1 cut(s)	1796
BspT107I	GGYRCC	1 cut(s)	627
BspTNI	GGTCTC	2 cut(s)	187, 2687
BsrBI	CCGCTC	1 cut(s)	847
BsrDI	GCAATG	4 cut(s)	46, 123, 1933, 2454
BsrFI	RCCGGY	2 cut(s)	228, 265
BssAI	RCCGGY	2 cut(s)	228, 265
BssECI	CCNNGG	3 cut(s)	665, 666, 755
BssMI	GATC	6 cut(s)	23, 305, 1333, 1612, 2278, 2770
BssNAI	GTATAC	1 cut(s)	82
BssNI	GRCGYC	1 cut(s)	628
BssSI	CACGAG	2 cut(s)	2574, 2796
Bst1107I	GTATAC	1 cut(s)	82
Bst2BI	CACGAG	2 cut(s)	2574, 2796
Bst2UI	CCWGG	6 cut(s)	213, 447, 667, 757, 881, 1022
Bst4CI	ACNGT	8 cut(s)	617, 795, 969, 1311, 1916, 1940, 2569, 2766
Bst6I	CTCTTC	5 cut(s)	17, 499, 1377, 2595, 2720
BstACI	GRCGYC	1 cut(s)	628
BstBI	TTCGAA	1 cut(s)	1796
BstC8I	GCNNGC	6 cut(s)	273, 959, 1416, 1994, 2074, 2388
BstENI	CCTNNNNNAGG	1 cut(s)	2702
BstFNI	CGCG	2 cut(s)	637, 1981
BstH2I	RGCGCY	1 cut(s)	631
BstHHI	GCGC	2 cut(s)	630, 1981
BstKTI	GATC	6 cut(s)	26, 308, 1336, 1615, 2281, 2773
BstMBI	GATC	6 cut(s)	23, 305, 1333, 1612, 2278, 2770
BstMWI	GCNNNNNNNGC	5 cut(s)	634, 1223, 1516, 1810, 2396
BstNI	CCWGG	6 cut(s)	213, 447, 667, 757, 881, 1022
BstNSI	RCATGY	2 cut(s)	821, 1793
BstSCI	CCNGG	6 cut(s)	211, 445, 665, 755, 879, 1020
BstSFI	CTRYAG	2 cut(s)	1699, 2400
BstUI	CGCG	2 cut(s)	637, 1981
BstV1I	GCAGC	6 cut(s)	257, 820, 1976, 2386, 2414, 2571
BstV2I	GAAGAC	3 cut(s)	1048, 1288, 1721
BstX2I	RGATCY	2 cut(s)	23, 305
BstXI	CCANNNNNNTGG	1 cut(s)	529
BstYI	RGATCY	2 cut(s)	23, 305
BstZ17I	GTATAC	1 cut(s)	82
BsuRI	GGCC	7 cut(s)	216, 351, 689, 1226, 2076, 2222, 2727
BtsIMutI	CAGTG	3 cut(s)	208, 1133, 1945
BveI	ACCTGC	2 cut(s)	169, 1706
Cac8I	GCNNGC	6 cut(s)	273, 959, 1416, 1994, 2074, 2388
CciI	TCATGA	1 cut(s)	745
CfoI	GCGC	2 cut(s)	630, 1981
Cfr10I	RCCGGY	2 cut(s)	228, 265
Cfr13I	GGNCC	3 cut(s)	532, 1018, 1224
CsiI	ACCWGGT	2 cut(s)	445, 879
Csp6I	GTAC	6 cut(s)	321, 1120, 1479, 1594, 2635, 2711
CviQI	GTAC	6 cut(s)	321, 1120, 1479, 1594, 2635, 2711
DinI	GGCGCC	1 cut(s)	629
DpnI	GATC	6 cut(s)	25, 307, 1335, 1614, 2280, 2772
DpnII	GATC	6 cut(s)	23, 305, 1333, 1612, 2278, 2770
DraI	TTTAAA	1 cut(s)	996
EaeI	YGGCCR	2 cut(s)	349, 2220
Eam1104I	CTCTTC	5 cut(s)	17, 499, 1377, 2595, 2720
EarI	CTCTTC	5 cut(s)	17, 499, 1377, 2595, 2720
Ecl136II	GAGCTC	2 cut(s)	492, 2028
Eco147I	AGGCCT	1 cut(s)	216
Eco24I	GRGCYC	4 cut(s)	494, 673, 1521, 2030
Eco31I	GGTCTC	2 cut(s)	187, 2687
Eco32I	GATATC	1 cut(s)	296
Eco47I	GGWCC	2 cut(s)	532, 1018
Eco53kI	GAGCTC	2 cut(s)	492, 2028
Eco57I	CTGAAG	3 cut(s)	1101, 1421, 1532
Eco88I	CYCGRG	1 cut(s)	952
EcoICRI	GAGCTC	2 cut(s)	492, 2028
EcoNI	CCTNNNNNAGG	1 cut(s)	2702
EcoO109I	RGGNCCY	2 cut(s)	1018, 1224
EcoRI	GAATTC	1 cut(s)	196
EcoRII	CCWGG	6 cut(s)	211, 445, 665, 755, 879, 1020
EcoRV	GATATC	1 cut(s)	296
EcoT38I	GRGCYC	4 cut(s)	494, 673, 1521, 2030
EgeI	GGCGCC	1 cut(s)	629
EheI	GGCGCC	1 cut(s)	629
FalI	AAGNNNNNCTT	2 cut(s)	28, 31
FauI	CCCGC	2 cut(s)	852, 1974
FbaI	TGATCA	1 cut(s)	2278
FblI	GTMKAC	2 cut(s)	81, 871
Fnu4HI	GCNGC	7 cut(s)	246, 809, 1990, 2223, 2400, 2403, 2585
FriOI	GRGCYC	4 cut(s)	494, 673, 1521, 2030
Fsp4HI	GCNGC	7 cut(s)	246, 809, 1990, 2223, 2400, 2403, 2585
FspBI	CTAG	8 cut(s)	36, 465, 507, 1286, 1331, 1961, 2396, 2777
GlaI	GCGC	2 cut(s)	629, 1980
GluI	GCNGC	7 cut(s)	246, 809, 1990, 2223, 2400, 2403, 2585
GsuI	CTGGAG	2 cut(s)	1032, 1067
HaeII	RGCGCY	1 cut(s)	631
HaeIII	GGCC	7 cut(s)	216, 351, 689, 1226, 2076, 2222, 2727
HapII	CCGG	2 cut(s)	229, 266
HhaI	GCGC	2 cut(s)	630, 1981
Hin1I	GRCGYC	1 cut(s)	628
Hin6I	GCGC	2 cut(s)	628, 1979
HinP1I	GCGC	2 cut(s)	628, 1979
HincII	GTYRAC	3 cut(s)	1344, 1824, 1950
HindII	GTYRAC	3 cut(s)	1344, 1824, 1950
HindIII	AAGCTT	5 cut(s)	1099, 1737, 2164, 2309, 2528
HpaI	GTTAAC	1 cut(s)	1950
HpaII	CCGG	2 cut(s)	229, 266
HphI	GGTGA	5 cut(s)	131, 654, 841, 2461, 2638
Hpy166II	GTNNAC	8 cut(s)	82, 662, 872, 1344, 1400, 1824, 1950, 2339
Hpy8I	GTNNAC	8 cut(s)	82, 662, 872, 1344, 1400, 1824, 1950, 2339
HpyCH4III	ACNGT	8 cut(s)	617, 795, 969, 1311, 1916, 1940, 2569, 2766
HpyCH4IV	ACGT	1 cut(s)	2487
HpyF10VI	GCNNNNNNNGC	5 cut(s)	634, 1223, 1516, 1810, 2396
HpySE526I	ACGT	1 cut(s)	2487
Hsp92I	GRCGYC	1 cut(s)	628
HspAI	GCGC	2 cut(s)	628, 1979
KasI	GGCGCC	1 cut(s)	627
Ksp22I	TGATCA	1 cut(s)	2278
KspAI	GTTAAC	1 cut(s)	1950
Kzo9I	GATC	6 cut(s)	23, 305, 1333, 1612, 2278, 2770
LguI	GCTCTTC	3 cut(s)	17, 499, 1377
LmnI	GCTCC	4 cut(s)	225, 489, 1810, 2033
Lsp1109I	GCAGC	6 cut(s)	257, 820, 1976, 2386, 2414, 2571
LweI	GCATC	7 cut(s)	397, 1610, 2095, 2234, 2242, 2490, 2571
MabI	ACCWGGT	2 cut(s)	445, 879
MaeI	CTAG	8 cut(s)	36, 465, 507, 1286, 1331, 1961, 2396, 2777
MaeII	ACGT	1 cut(s)	2487
MaeIII	GTNAC	5 cut(s)	119, 1305, 1353, 2537, 2569
MalI	GATC	6 cut(s)	25, 307, 1335, 1614, 2280, 2772
MbiI	CCGCTC	1 cut(s)	847
MboI	GATC	6 cut(s)	23, 305, 1333, 1612, 2278, 2770
MfeI	CAATTG	1 cut(s)	1719
MflI	RGATCY	2 cut(s)	23, 305
MhlI	GDGCHC	4 cut(s)	494, 673, 1521, 2030
MlsI	TGGCCA	1 cut(s)	351
MluNI	TGGCCA	1 cut(s)	351
Mly113I	GGCGCC	1 cut(s)	628
MlyI	GAGTC	4 cut(s)	217, 1277, 1853, 2791
MmeI	TCCRAC	3 cut(s)	347, 1359, 1836
Mox20I	TGGCCA	1 cut(s)	351
MroXI	GAANNNNTTC	3 cut(s)	11, 968, 1101
MscI	TGGCCA	1 cut(s)	351
MseI	TTAA	9 cut(s)	995, 1458, 1691, 1844, 1949, 2147, 2168, 2564, 2670
MslI	CAYNNNNRTG	3 cut(s)	942, 1526, 2274
Msp20I	TGGCCA	1 cut(s)	351
MspA1I	CMGCKG	3 cut(s)	416, 1510, 2405
MspI	CCGG	2 cut(s)	229, 266
MspR9I	CCNGG	6 cut(s)	213, 447, 667, 757, 881, 1022
MssI	GTTTAAAC	1 cut(s)	996
MunI	CAATTG	1 cut(s)	1719
MvaI	CCWGG	6 cut(s)	213, 447, 667, 757, 881, 1022
MvnI	CGCG	2 cut(s)	637, 1981
MwoI	GCNNNNNNNGC	5 cut(s)	634, 1223, 1516, 1810, 2396
NarI	GGCGCC	1 cut(s)	628
NdeII	GATC	6 cut(s)	23, 305, 1333, 1612, 2278, 2770
NlaIV	GGNNCC	2 cut(s)	227, 629
NmuCI	GTSAC	3 cut(s)	119, 1353, 2537
NspI	RCATGY	2 cut(s)	821, 1793
NspV	TTCGAA	1 cut(s)	1796
PaeR7I	CTCGAG	1 cut(s)	952
PagI	TCATGA	1 cut(s)	745
PasI	CCCWGGG	1 cut(s)	666
PceI	AGGCCT	1 cut(s)	216
PciSI	GCTCTTC	3 cut(s)	17, 499, 1377
PdmI	GAANNNNTTC	3 cut(s)	11, 968, 1101
PfeI	GAWTC	9 cut(s)	156, 749, 1138, 1170, 1552, 1880, 2123, 2261, 2549
PflFI	GACNNNGTC	1 cut(s)	2188
PflMI	CCANNNNNTGG	1 cut(s)	723
PkrI	GCNGC	7 cut(s)	247, 810, 1991, 2224, 2401, 2404, 2586
PleI	GAGTC	4 cut(s)	216, 1276, 1853, 2790
PluTI	GGCGCC	1 cut(s)	631
PmeI	GTTTAAAC	1 cut(s)	996
PpsI	GAGTC	4 cut(s)	216, 1276, 1853, 2790
PpuMI	RGGWCCY	1 cut(s)	1018
Psp124BI	GAGCTC	2 cut(s)	494, 2030
Psp5II	RGGWCCY	1 cut(s)	1018
Psp6I	CCWGG	6 cut(s)	211, 445, 665, 755, 879, 1020
PspGI	CCWGG	6 cut(s)	211, 445, 665, 755, 879, 1020
PspN4I	GGNNCC	2 cut(s)	227, 629
PspPI	GGNCC	3 cut(s)	532, 1018, 1224
PspPPI	RGGWCCY	1 cut(s)	1018
PspXI	VCTCGAGB	1 cut(s)	952
PstI	CTGCAG	2 cut(s)	1703, 2404
PsuI	RGATCY	2 cut(s)	23, 305
PsyI	GACNNNGTC	1 cut(s)	2188
PvuII	CAGCTG	3 cut(s)	416, 1510, 2405
RsaI	GTAC	6 cut(s)	322, 1121, 1480, 1595, 2636, 2712
RsaNI	GTAC	6 cut(s)	321, 1120, 1479, 1594, 2635, 2711
RseI	CAYNNNNRTG	3 cut(s)	942, 1526, 2274
SacI	GAGCTC	2 cut(s)	494, 2030
SapI	GCTCTTC	3 cut(s)	17, 499, 1377
SaqAI	TTAA	9 cut(s)	995, 1458, 1691, 1844, 1949, 2147, 2168, 2564, 2670
SatI	GCNGC	7 cut(s)	246, 809, 1990, 2223, 2400, 2403, 2585
Sau3AI	GATC	6 cut(s)	23, 305, 1333, 1612, 2278, 2770
Sau96I	GGNCC	3 cut(s)	532, 1018, 1224
ScaI	AGTACT	1 cut(s)	2712
SchI	GAGTC	4 cut(s)	217, 1277, 1853, 2791
ScrFI	CCNGG	6 cut(s)	213, 447, 667, 757, 881, 1022
SduI	GDGCHC	4 cut(s)	494, 673, 1521, 2030
SexAI	ACCWGGT	2 cut(s)	445, 879
SfaNI	GCATC	7 cut(s)	397, 1610, 2095, 2234, 2242, 2490, 2571
SfcI	CTRYAG	2 cut(s)	1699, 2400
SfoI	GGCGCC	1 cut(s)	629
Sfr274I	CTCGAG	1 cut(s)	952
SfuI	TTCGAA	1 cut(s)	1796
SinI	GGWCC	2 cut(s)	532, 1018
SlaI	CTCGAG	1 cut(s)	952
SmiMI	CAYNNNNRTG	3 cut(s)	942, 1526, 2274
SmlI	CTYRAG	6 cut(s)	952, 1088, 1184, 1265, 1358, 2504
SmoI	CTYRAG	6 cut(s)	952, 1088, 1184, 1265, 1358, 2504
SseBI	AGGCCT	1 cut(s)	216
SsiI	CCGC	5 cut(s)	535, 635, 845, 1981, 2223
SspDI	GGCGCC	1 cut(s)	627
SspMI	CTAG	8 cut(s)	36, 465, 507, 1286, 1331, 1961, 2396, 2777
SstI	GAGCTC	2 cut(s)	494, 2030
StuI	AGGCCT	1 cut(s)	216
StyD4I	CCNGG	6 cut(s)	211, 445, 665, 755, 879, 1020
TaaI	ACNGT	8 cut(s)	617, 795, 969, 1311, 1916, 1940, 2569, 2766
TaiI	ACGT	1 cut(s)	2490
TaqI	TCGA	9 cut(s)	172, 290, 340, 729, 953, 1273, 1336, 1796, 2812
TatI	WGTACW	5 cut(s)	320, 1478, 1593, 2634, 2710
TauI	GCSGC	1 cut(s)	2225
TfiI	GAWTC	9 cut(s)	156, 749, 1138, 1170, 1552, 1880, 2123, 2261, 2549
Tru1I	TTAA	9 cut(s)	995, 1458, 1691, 1844, 1949, 2147, 2168, 2564, 2670
Tru9I	TTAA	9 cut(s)	995, 1458, 1691, 1844, 1949, 2147, 2168, 2564, 2670
TscAI	CASTG	3 cut(s)	208, 1140, 1945
TseFI	GTSAC	3 cut(s)	119, 1353, 2537
TseI	GCWGC	6 cut(s)	245, 808, 1989, 2399, 2402, 2584
Tsp45I	GTSAC	3 cut(s)	119, 1353, 2537
TspDTI	ATGAA	6 cut(s)	17, 666, 762, 1477, 2147, 2220
TspGWI	ACGGA	3 cut(s)	447, 561, 1616
TspRI	CASTG	3 cut(s)	208, 1140, 1945
Tth111I	GACNNNGTC	1 cut(s)	2188
Van91I	CCANNNNNTGG	1 cut(s)	723
VpaK11BI	GGWCC	2 cut(s)	532, 1018
XagI	CCTNNNNNAGG	1 cut(s)	2702
XapI	RAATTY	7 cut(s)	196, 278, 827, 1633, 2054, 2592, 2801
XceI	RCATGY	2 cut(s)	821, 1793
XhoI	CTCGAG	1 cut(s)	952
XmiI	GTMKAC	2 cut(s)	81, 871
XmnI	GAANNNNTTC	3 cut(s)	11, 968, 1101
XspI	CTAG	8 cut(s)	36, 465, 507, 1286, 1331, 1961, 2396, 2777
ZrmI	AGTACT	1 cut(s)	2712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.