Rh1BG288100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0003790
Physical Location & Seq
Reverse (-)
42371845 .. 42377546
5702 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG288100.1

Sequence Viewer

Length: 2817 bp
ATGAAGAAGCTCTTCTTTTTCAGATCTTCTGCTTCTAGCAATGGAAACAACAAATCCCCTCCATCAACTGATAAGCAAGTATACTGGGAAAACCCATCAGAAAATGGAAGTCAAGTTGGTGACATTGCTGATAATAGGTTTCAAAGCCCTAAAGGATTCTTTTCTAAATCTCGAAAGCAGGTCTCTGATATCAAGAATTCCAGTGAGAGTCCAGGCCTTAGAAGGAGCCGGTCATTATCATCAGCAGCTTTCCTTGTAAGTGAGCCGGTGCAAGCAGAATTTTCTTCTTTGAGATATCAGAGTAGATCTCCTTGTAGTAGTACAAGTAGTATTCCTCATCGACAATGTGGCCAATCATCTTGTTGTCGGACTTTTACCCCTGAGAGGCATCAGGCTAAAGAGTTAGAAGTTCCAGCTGTTCAAAATACACACGGATTAGAACGACCTGGTTCTGCTGGTTCTCCTAGAATACAGCATGGTTCGTCAGGGAGCTCTTCTACTTGCTCTAGTAATGTCTCATCCAAAGTTTTGGACCGCTATATAGACGGAGAGCAGGAGGAAAGGGGCAGACAAGAGAACAATTCTTCCCATAGAAACTTCAATGGGATTGGAAACGGTGGTGGATGGCGCCCTCCGCGAGTTCAGATTACAGCCCCCAGTTCACCCAGGGCTCATTCATTTAGAGAGGCCAAAAGTTCTCGTTATCGTCTATCATCCAAAGATTGGGTCGAAAATGGATTTGGGCATGAATCTCCCAGGAGACTTGCAAAGAATGTTGTGGAGAGGCTCTCACAGTCTCATGTCATGCAGCCATCACATGCAAAGGAATTTGACCATGACATCCCACTCACCATTGAGGATATATATGGTAGACCGGACCTGGTAAGCCAGAAAACTTACCCTTTGGACGAACCTTATGACACAATTAGTAAATATCATGGGGATGATTACTCGAGCTTGCAGAAACAGTTCTATGGAGAGAAGTGTAATGGTTTAAACTCTGATGAGACTGGAGAGGACCTGGATGTGGAATTACAAAGAAGACTGGAGGAAGCTGAGGAGAAGGTCATGCTTCTGTCTGAAGAACTTGAGCAGGAAAGCTTTCTTAGAGATAGTGGGTACAATGTGCCATCACTGATTCAGACAATTAGAAACCTAACAGAGCAGAGAATCAGCTTTGCACTTGAGGTTTCAAACCTCCTTCAATTACGAATTGCTGAGAGGGCCTCTGCCAAGAAAGAATTGAGACTGGCAAACGCAGAACTTGAGTCTCGAACCAGAAGACTAGAGAAGGAGAAGAATGAGTTACAGTCAGCATTGGAGACAGAACTAGATCGAAGGTCAACTGACTGGTCATTCAAGCTGGACAAATATCAGTCGGAAGAGCAGAGGCTTCGTGAACGAGTTAGAGAGCTTGCAGAGCAAAATGTCTCACTTCAGAGAGAAGTTTCTTCTTTTAATGTGAGGGAAACTGAGAGTAGAAGCTTCATAACAAATGCAGAGCAACAGCTTAAGGGGCTCACTACTAGGATGGAGGAAATGAGAGAGGAGAATCAAGGCCTACAAGAAAATCTCTCGGAATTGCAAGAGAAGTACAGAGCATCAGAGGAAGATCGTGTTTGTCTCCGTAAGAATTTTGAAGAGAGGAATAAGGAGTGCAAGGATTTGCATAAATCCATTACAAGATTATTAAGAACCTGCAGAGAACAAGAGAAGACAATTGATGGGTTGCGTGAAGGTTTTAGTGAGGAGTTCGGGAAAAATCAATCATCGGAGAGGTTTGATAAGCATGTTTCGAAATTGCAGATGGAGCAAATGAGGTTGACAGGAGTAGAACTGGGTTTAAGGAGAGAGTTGGACTCTCAAAGGCTTGAAGTTGATTCTCTTAGGCATGAGAATATACACTTGTTAGACCGTTTGAGGGGCAATGGGAAAGACAGTGGTGCTTTAACTTTCAAGCTAGATAAGGAGATGTGGGCGCGGGTCGGCTGCTTGCAAAATCAAGGGCTATCACTCCTAAATGAGAGCTCCCAGTTGTGTTCAGATTTTCTGGAATTTGTCAAAAGAAAAGCAGGCCATCTCCAAGAAGCTAAGCAGGGTTTGGATGCACAATTTTTTGTTGAATCTGAAATGAAAGTGCAGGGGTTAAAGCGTGGAACTGAAAGCTTAACCAGAAGTTTGCAGACAATGTCTGCTTTGTTCCATGAAAAGTCCAGTCTGGCCGCATCAAAATATCAATCTAAGTGCATGGATGCTGACGAATCAGGACATTCAAATGATCAAATCCCAGAGGACGATATGAGATATAAGCTTCAATCAGAAACTATACTTACAAGTTTACTAAGAGAGAAGATACATTCTAAAGAGCTGGAAGTTGAGCAGTTGCAAGCTGAACTAGCTGCAGCTGTAAGAGGAAATGACATCCTTAGATGTGAAGTTCAAAATGCAATGGACAACCTTTCCTGTCTCACCCACAAGTTGAAAGACGTTGAACTACTGATGCTCAAGAAGGATGATAACATAAACAAGCTTCAAAGTGACCTCCAAGAATCTACAAAGGAATTAACAGTTACACGAGGGATACTGCCTAAAATTTCAGAAGAGAGAGATATGATGTGGGAGGAGGTGAAAAAGTACAATGAGAAGAATATGCTGTTGAACTCGGAGGTTAATCTGTTGAAGAAGAAGATAGAGACCCTTGATGAGGAAGTACTCTTCAAAGAAGGCCAGATTACAATCCTGAAAGATACATTAGGGAACAAACCGTTTGATCTTCTAGCGAGTCCTGATAATACACGAGAATTTCTGGTTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

938

Amino Acids

107.52

Weight (kDa)

6.01

Isoelectric Point (pI)

60.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7653 PF24670 615 - 738 7.9e-55 Domain of unknown function (DUF7653)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 169, 1706
AccB1I GGYRCC 1 cut(s) 627
AccB7I CCANNNNNTGG 1 cut(s) 723
AccI GTMKAC 2 cut(s) 81, 871
AccII CGCG 2 cut(s) 637, 1981
AciI CCGC 4 cut(s) 535, 635, 1981, 2223
AcoI YGGCCR 2 cut(s) 349, 2220
AcsI RAATTY 7 cut(s) 196, 278, 827, 1633, 2054, 2592, 2801
AcuI CTGAAG 2 cut(s) 1101, 1421
AcyI GRCGYC 1 cut(s) 628
AfaI GTAC 5 cut(s) 322, 1121, 1595, 2636, 2712
AfiI CCNNNNNNNGG 5 cut(s) 384, 723, 1027, 1921, 2704
AflII CTTAAG 1 cut(s) 1511
AjnI CCWGG 6 cut(s) 211, 445, 665, 755, 879, 1020
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
AloI GAACNNNNNNTCC 2 cut(s) 569, 601
Alw21I GWGCWC 2 cut(s) 494, 2030
Ama87I CYCGRG 1 cut(s) 952
AoxI GGCC 8 cut(s) 214, 349, 687, 1224, 1558, 2074, 2220, 2725
ApeKI GCWGC 5 cut(s) 245, 808, 1989, 2399, 2402
ApoI RAATTY 7 cut(s) 196, 278, 827, 1633, 2054, 2592, 2801
ArsI GACNNNNNNTTYG 2 cut(s) 711, 743
Asp700I GAANNNNTTC 3 cut(s) 11, 968, 1101
AspLEI GCGC 2 cut(s) 630, 1981
AspS9I GGNCC 4 cut(s) 532, 877, 1018, 1224
AsuHPI GGTGA 5 cut(s) 131, 654, 841, 2461, 2638
AsuII TTCGAA 1 cut(s) 1796
AvaI CYCGRG 1 cut(s) 952
AvaII GGWCC 3 cut(s) 532, 877, 1018
BalI TGGCCA 1 cut(s) 351
BanI GGYRCC 1 cut(s) 627
BanII GRGCYC 4 cut(s) 494, 673, 1521, 2030
BauI CACGAG 2 cut(s) 2574, 2796
BbsI GAAGAC 3 cut(s) 1048, 1288, 1721
Bbv12I GWGCWC 2 cut(s) 494, 2030
BbvCI CCTCAGC 1 cut(s) 1056
BbvI GCAGC 5 cut(s) 257, 820, 1976, 2386, 2414
BccI CCATC 9 cut(s) 70, 103, 618, 820, 1138, 1525, 1718, 1801, 2085
BcgI CGANNNNNNTGC 2 cut(s) 1376, 1410
BciT130I CCWGG 6 cut(s) 213, 447, 667, 757, 881, 1022
BciVI GTATCC 1 cut(s) 2574
BclI TGATCA 1 cut(s) 2278
BfaI CTAG 9 cut(s) 36, 465, 507, 1286, 1331, 1527, 1961, 2396, 2777
BfmI CTRYAG 2 cut(s) 1699, 2400
BfoI RGCGCY 1 cut(s) 631
BfrI CTTAAG 1 cut(s) 1511
BfuAI ACCTGC 2 cut(s) 169, 1706
BfuI GTATCC 1 cut(s) 2574
BglII AGATCT 2 cut(s) 23, 305
BisI GCNGC 6 cut(s) 246, 809, 1990, 2223, 2400, 2403
BlpI GCTNAGC 1 cut(s) 2091
BlsI GCNGC 6 cut(s) 247, 810, 1991, 2224, 2401, 2404
BmcAI AGTACT 1 cut(s) 2712
Bme1390I CCNGG 6 cut(s) 213, 447, 667, 757, 881, 1022
Bme18I GGWCC 3 cut(s) 532, 877, 1018
BmeT110I CYCGRG 1 cut(s) 952
BmgT120I GGNCC 4 cut(s) 532, 877, 1018, 1224
BmiI GGNNCC 2 cut(s) 227, 629
BmrFI CCNGG 6 cut(s) 213, 447, 667, 757, 881, 1022
BmrI ACTGGG 4 cut(s) 94, 651, 1847, 2026
BmsI GCATC 6 cut(s) 397, 1610, 2095, 2234, 2242, 2490
BmuI ACTGGG 4 cut(s) 94, 651, 1847, 2026
BpiI GAAGAC 3 cut(s) 1048, 1288, 1721
BplI GAGNNNNNCTC 8 cut(s) 292, 324, 773, 805, 1211, 1243, 1844, 1876
BpmI CTGGAG 2 cut(s) 1032, 1067
Bpu10I CCTNAGC 1 cut(s) 1056
Bpu1102I GCTNAGC 1 cut(s) 2091
Bpu14I TTCGAA 1 cut(s) 1796
BpuEI CTTGAG 4 cut(s) 1109, 1205, 1286, 2489
BsaBI GATNNNNATC 1 cut(s) 2735
BsaHI GRCGYC 1 cut(s) 628
BsaI GGTCTC 2 cut(s) 187, 2687
BsaJI CCNNGG 3 cut(s) 665, 666, 755
BsaWI WCCGGW 1 cut(s) 874
Bsc4I CCNNNNNNNGG 5 cut(s) 384, 723, 1027, 1921, 2704
Bse118I RCCGGY 2 cut(s) 228, 265
Bse3DI GCAATG 4 cut(s) 46, 123, 1933, 2454
Bse8I GATNNNNATC 1 cut(s) 2735
BseBI CCWGG 6 cut(s) 213, 447, 667, 757, 881, 1022
BseDI CCNNGG 3 cut(s) 665, 666, 755
BseJI GATNNNNATC 1 cut(s) 2735
BseLI CCNNNNNNNGG 5 cut(s) 384, 723, 1027, 1921, 2704
BseMI GCAATG 4 cut(s) 46, 123, 1933, 2454
BseMII CTCAG 4 cut(s) 372, 1047, 1209, 1464
BseRI GAGGAG 4 cut(s) 1073, 1562, 1763, 2636
BseXI GCAGC 5 cut(s) 257, 820, 1976, 2386, 2414
BsgI GTGCAG 1 cut(s) 2159
Bsh1236I CGCG 2 cut(s) 637, 1981
BshFI GGCC 8 cut(s) 216, 351, 689, 1226, 1560, 2076, 2222, 2727
BshNI GGYRCC 1 cut(s) 627
BsiHKAI GWGCWC 2 cut(s) 494, 2030
BsiHKCI CYCGRG 1 cut(s) 952
BsiSI CCGG 3 cut(s) 229, 266, 875
BslI CCNNNNNNNGG 5 cut(s) 384, 723, 1027, 1921, 2704
BsnI GGCC 8 cut(s) 216, 351, 689, 1226, 1560, 2076, 2222, 2727
Bso31I GGTCTC 2 cut(s) 187, 2687
BsoBI CYCGRG 1 cut(s) 952
Bsp119I TTCGAA 1 cut(s) 1796
Bsp1286I GDGCHC 4 cut(s) 494, 673, 1521, 2030
Bsp143I GATC 6 cut(s) 23, 305, 1333, 1612, 2278, 2770
Bsp1720I GCTNAGC 1 cut(s) 2091
BspACI CCGC 4 cut(s) 535, 635, 1981, 2223
BspANI GGCC 8 cut(s) 216, 351, 689, 1226, 1560, 2076, 2222, 2727
BspCNI CTCAG 4 cut(s) 373, 1048, 1210, 1465
BspFNI CGCG 2 cut(s) 637, 1981
BspLI GGNNCC 2 cut(s) 227, 629
BspMAI CTGCAG 2 cut(s) 1703, 2404
BspMI ACCTGC 2 cut(s) 169, 1706
BspQI GCTCTTC 3 cut(s) 17, 499, 1377
BspT104I TTCGAA 1 cut(s) 1796
BspT107I GGYRCC 1 cut(s) 627
BspTI CTTAAG 1 cut(s) 1511
BspTNI GGTCTC 2 cut(s) 187, 2687
BsrDI GCAATG 4 cut(s) 46, 123, 1933, 2454
BsrFI RCCGGY 2 cut(s) 228, 265
BssAI RCCGGY 2 cut(s) 228, 265
BssECI CCNNGG 3 cut(s) 665, 666, 755
BssMI GATC 6 cut(s) 23, 305, 1333, 1612, 2278, 2770
BssNAI GTATAC 1 cut(s) 82
BssNI GRCGYC 1 cut(s) 628
BssSI CACGAG 2 cut(s) 2574, 2796
Bst1107I GTATAC 1 cut(s) 82
Bst2BI CACGAG 2 cut(s) 2574, 2796
Bst2UI CCWGG 6 cut(s) 213, 447, 667, 757, 881, 1022
Bst4CI ACNGT 8 cut(s) 617, 795, 969, 1311, 1916, 1940, 2569, 2766
Bst6I CTCTTC 6 cut(s) 17, 499, 1377, 1635, 2595, 2720
BstACI GRCGYC 1 cut(s) 628
BstAFI CTTAAG 1 cut(s) 1511
BstBI TTCGAA 1 cut(s) 1796
BstC8I GCNNGC 6 cut(s) 273, 959, 1416, 1994, 2074, 2388
BstENI CCTNNNNNAGG 1 cut(s) 2702
BstFNI CGCG 2 cut(s) 637, 1981
BstH2I RGCGCY 1 cut(s) 631
BstHHI GCGC 2 cut(s) 630, 1981
BstKTI GATC 6 cut(s) 26, 308, 1336, 1615, 2281, 2773
BstMBI GATC 6 cut(s) 23, 305, 1333, 1612, 2278, 2770
BstMWI GCNNNNNNNGC 6 cut(s) 634, 1223, 1420, 1516, 1810, 2396
BstNI CCWGG 6 cut(s) 213, 447, 667, 757, 881, 1022
BstNSI RCATGY 2 cut(s) 821, 1793
BstSCI CCNGG 6 cut(s) 211, 445, 665, 755, 879, 1020
BstSFI CTRYAG 2 cut(s) 1699, 2400
BstUI CGCG 2 cut(s) 637, 1981
BstV1I GCAGC 5 cut(s) 257, 820, 1976, 2386, 2414
BstV2I GAAGAC 3 cut(s) 1048, 1288, 1721
BstX2I RGATCY 2 cut(s) 23, 305
BstXI CCANNNNNNTGG 1 cut(s) 529
BstYI RGATCY 2 cut(s) 23, 305
BstZ17I GTATAC 1 cut(s) 82
BsuI GTATCC 1 cut(s) 2574
BsuRI GGCC 8 cut(s) 216, 351, 689, 1226, 1560, 2076, 2222, 2727
BtsIMutI CAGTG 3 cut(s) 208, 1133, 1945
BveI ACCTGC 2 cut(s) 169, 1706
Cac8I GCNNGC 6 cut(s) 273, 959, 1416, 1994, 2074, 2388
CfoI GCGC 2 cut(s) 630, 1981
Cfr10I RCCGGY 2 cut(s) 228, 265
Cfr13I GGNCC 4 cut(s) 532, 877, 1018, 1224
CsiI ACCWGGT 2 cut(s) 445, 879
Csp6I GTAC 5 cut(s) 321, 1120, 1594, 2635, 2711
CviQI GTAC 5 cut(s) 321, 1120, 1594, 2635, 2711
DinI GGCGCC 1 cut(s) 629
DpnI GATC 6 cut(s) 25, 307, 1335, 1614, 2280, 2772
DpnII GATC 6 cut(s) 23, 305, 1333, 1612, 2278, 2770
DraI TTTAAA 1 cut(s) 996
EaeI YGGCCR 2 cut(s) 349, 2220
Eam1104I CTCTTC 6 cut(s) 17, 499, 1377, 1635, 2595, 2720
EarI CTCTTC 6 cut(s) 17, 499, 1377, 1635, 2595, 2720
Ecl136II GAGCTC 2 cut(s) 492, 2028
Eco147I AGGCCT 2 cut(s) 216, 1560
Eco24I GRGCYC 4 cut(s) 494, 673, 1521, 2030
Eco31I GGTCTC 2 cut(s) 187, 2687
Eco32I GATATC 2 cut(s) 190, 296
Eco47I GGWCC 3 cut(s) 532, 877, 1018
Eco53kI GAGCTC 2 cut(s) 492, 2028
Eco57I CTGAAG 2 cut(s) 1101, 1421
Eco88I CYCGRG 1 cut(s) 952
EcoICRI GAGCTC 2 cut(s) 492, 2028
EcoNI CCTNNNNNAGG 1 cut(s) 2702
EcoO109I RGGNCCY 2 cut(s) 1018, 1224
EcoRI GAATTC 1 cut(s) 196
EcoRII CCWGG 6 cut(s) 211, 445, 665, 755, 879, 1020
EcoRV GATATC 2 cut(s) 190, 296
EcoT38I GRGCYC 4 cut(s) 494, 673, 1521, 2030
EgeI GGCGCC 1 cut(s) 629
EheI GGCGCC 1 cut(s) 629
FalI AAGNNNNNCTT 2 cut(s) 28, 31
FauI CCCGC 1 cut(s) 1974
FbaI TGATCA 1 cut(s) 2278
FblI GTMKAC 2 cut(s) 81, 871
Fnu4HI GCNGC 6 cut(s) 246, 809, 1990, 2223, 2400, 2403
FriOI GRGCYC 4 cut(s) 494, 673, 1521, 2030
Fsp4HI GCNGC 6 cut(s) 246, 809, 1990, 2223, 2400, 2403
FspBI CTAG 9 cut(s) 36, 465, 507, 1286, 1331, 1527, 1961, 2396, 2777
GlaI GCGC 2 cut(s) 629, 1980
GluI GCNGC 6 cut(s) 246, 809, 1990, 2223, 2400, 2403
GsuI CTGGAG 2 cut(s) 1032, 1067
HaeII RGCGCY 1 cut(s) 631
HaeIII GGCC 8 cut(s) 216, 351, 689, 1226, 1560, 2076, 2222, 2727
HapII CCGG 3 cut(s) 229, 266, 875
HhaI GCGC 2 cut(s) 630, 1981
Hin1I GRCGYC 1 cut(s) 628
Hin6I GCGC 2 cut(s) 628, 1979
HinP1I GCGC 2 cut(s) 628, 1979
HincII GTYRAC 2 cut(s) 1344, 1824
HindII GTYRAC 2 cut(s) 1344, 1824
HindIII AAGCTT 5 cut(s) 1099, 1483, 2164, 2309, 2528
HpaII CCGG 3 cut(s) 229, 266, 875
HphI GGTGA 5 cut(s) 131, 654, 841, 2461, 2638
Hpy166II GTNNAC 7 cut(s) 82, 662, 872, 1344, 1400, 1824, 2339
Hpy8I GTNNAC 7 cut(s) 82, 662, 872, 1344, 1400, 1824, 2339
HpyAV CCTTC 8 cut(s) 216, 1057, 1211, 1285, 1332, 1730, 2503, 2717
HpyCH4III ACNGT 8 cut(s) 617, 795, 969, 1311, 1916, 1940, 2569, 2766
HpyCH4IV ACGT 1 cut(s) 2487
HpyF10VI GCNNNNNNNGC 6 cut(s) 634, 1223, 1420, 1516, 1810, 2396
HpySE526I ACGT 1 cut(s) 2487
Hsp92I GRCGYC 1 cut(s) 628
HspAI GCGC 2 cut(s) 628, 1979
KasI GGCGCC 1 cut(s) 627
Ksp22I TGATCA 1 cut(s) 2278
Kzo9I GATC 6 cut(s) 23, 305, 1333, 1612, 2278, 2770
LguI GCTCTTC 3 cut(s) 17, 499, 1377
LmnI GCTCC 4 cut(s) 225, 489, 1810, 2033
Lsp1109I GCAGC 5 cut(s) 257, 820, 1976, 2386, 2414
LweI GCATC 6 cut(s) 397, 1610, 2095, 2234, 2242, 2490
MabI ACCWGGT 2 cut(s) 445, 879
MaeI CTAG 9 cut(s) 36, 465, 507, 1286, 1331, 1527, 1961, 2396, 2777
MaeII ACGT 1 cut(s) 2487
MaeIII GTNAC 4 cut(s) 119, 1305, 2537, 2569
MalI GATC 6 cut(s) 25, 307, 1335, 1614, 2280, 2772
MboI GATC 6 cut(s) 23, 305, 1333, 1612, 2278, 2770
MfeI CAATTG 1 cut(s) 1719
MflI RGATCY 2 cut(s) 23, 305
MhlI GDGCHC 4 cut(s) 494, 673, 1521, 2030
MlsI TGGCCA 1 cut(s) 351
MluNI TGGCCA 1 cut(s) 351
Mly113I GGCGCC 1 cut(s) 628
MlyI GAGTC 4 cut(s) 217, 1277, 1853, 2791
MmeI TCCRAC 3 cut(s) 347, 1359, 1836
Mox20I TGGCCA 1 cut(s) 351
MroXI GAANNNNTTC 3 cut(s) 11, 968, 1101
MscI TGGCCA 1 cut(s) 351
MslI CAYNNNNRTG 2 cut(s) 942, 2274
Msp20I TGGCCA 1 cut(s) 351
MspA1I CMGCKG 2 cut(s) 416, 2405
MspCI CTTAAG 1 cut(s) 1511
MspI CCGG 3 cut(s) 229, 266, 875
MspR9I CCNGG 6 cut(s) 213, 447, 667, 757, 881, 1022
MssI GTTTAAAC 1 cut(s) 996
MunI CAATTG 1 cut(s) 1719
MvaI CCWGG 6 cut(s) 213, 447, 667, 757, 881, 1022
MvnI CGCG 2 cut(s) 637, 1981
MwoI GCNNNNNNNGC 6 cut(s) 634, 1223, 1420, 1516, 1810, 2396
NarI GGCGCC 1 cut(s) 628
NdeII GATC 6 cut(s) 23, 305, 1333, 1612, 2278, 2770
NlaIV GGNNCC 2 cut(s) 227, 629
NmuCI GTSAC 2 cut(s) 119, 2537
NspI RCATGY 2 cut(s) 821, 1793
NspV TTCGAA 1 cut(s) 1796
PaeR7I CTCGAG 1 cut(s) 952
PasI CCCWGGG 1 cut(s) 666
PceI AGGCCT 2 cut(s) 216, 1560
PciSI GCTCTTC 3 cut(s) 17, 499, 1377
PdmI GAANNNNTTC 3 cut(s) 11, 968, 1101
PfeI GAWTC 9 cut(s) 156, 749, 1138, 1170, 1552, 1880, 2123, 2261, 2549
PflFI GACNNNGTC 1 cut(s) 2188
PflMI CCANNNNNTGG 1 cut(s) 723
PkrI GCNGC 6 cut(s) 247, 810, 1991, 2224, 2401, 2404
PleI GAGTC 4 cut(s) 216, 1276, 1853, 2790
PluTI GGCGCC 1 cut(s) 631
PmeI GTTTAAAC 1 cut(s) 996
PpsI GAGTC 4 cut(s) 216, 1276, 1853, 2790
PpuMI RGGWCCY 1 cut(s) 1018
Psp124BI GAGCTC 2 cut(s) 494, 2030
Psp5II RGGWCCY 1 cut(s) 1018
Psp6I CCWGG 6 cut(s) 211, 445, 665, 755, 879, 1020
PspGI CCWGG 6 cut(s) 211, 445, 665, 755, 879, 1020
PspN4I GGNNCC 2 cut(s) 227, 629
PspPI GGNCC 4 cut(s) 532, 877, 1018, 1224
PspPPI RGGWCCY 1 cut(s) 1018
PspXI VCTCGAGB 1 cut(s) 952
PstI CTGCAG 2 cut(s) 1703, 2404
PsuI RGATCY 2 cut(s) 23, 305
PsyI GACNNNGTC 1 cut(s) 2188
PvuII CAGCTG 2 cut(s) 416, 2405
RsaI GTAC 5 cut(s) 322, 1121, 1595, 2636, 2712
RsaNI GTAC 5 cut(s) 321, 1120, 1594, 2635, 2711
RseI CAYNNNNRTG 2 cut(s) 942, 2274
SacI GAGCTC 2 cut(s) 494, 2030
SapI GCTCTTC 3 cut(s) 17, 499, 1377
SatI GCNGC 6 cut(s) 246, 809, 1990, 2223, 2400, 2403
Sau3AI GATC 6 cut(s) 23, 305, 1333, 1612, 2278, 2770
Sau96I GGNCC 4 cut(s) 532, 877, 1018, 1224
ScaI AGTACT 1 cut(s) 2712
SchI GAGTC 4 cut(s) 217, 1277, 1853, 2791
ScrFI CCNGG 6 cut(s) 213, 447, 667, 757, 881, 1022
SduI GDGCHC 4 cut(s) 494, 673, 1521, 2030
SexAI ACCWGGT 2 cut(s) 445, 879
SfaNI GCATC 6 cut(s) 397, 1610, 2095, 2234, 2242, 2490
SfcI CTRYAG 2 cut(s) 1699, 2400
SfoI GGCGCC 1 cut(s) 629
Sfr274I CTCGAG 1 cut(s) 952
SfuI TTCGAA 1 cut(s) 1796
SinI GGWCC 3 cut(s) 532, 877, 1018
SlaI CTCGAG 1 cut(s) 952
SmiMI CAYNNNNRTG 2 cut(s) 942, 2274
SmlI CTYRAG 6 cut(s) 952, 1088, 1184, 1265, 1511, 2504
SmoI CTYRAG 6 cut(s) 952, 1088, 1184, 1265, 1511, 2504
SseBI AGGCCT 2 cut(s) 216, 1560
SsiI CCGC 4 cut(s) 535, 635, 1981, 2223
SspDI GGCGCC 1 cut(s) 627
SspMI CTAG 9 cut(s) 36, 465, 507, 1286, 1331, 1527, 1961, 2396, 2777
SstI GAGCTC 2 cut(s) 494, 2030
StuI AGGCCT 2 cut(s) 216, 1560
StyD4I CCNGG 6 cut(s) 211, 445, 665, 755, 879, 1020
TaaI ACNGT 8 cut(s) 617, 795, 969, 1311, 1916, 1940, 2569, 2766
TaiI ACGT 1 cut(s) 2490
TaqI TCGA 8 cut(s) 172, 340, 729, 953, 1273, 1336, 1796, 2812
TatI WGTACW 4 cut(s) 320, 1593, 2634, 2710
TauI GCSGC 1 cut(s) 2225
TfiI GAWTC 9 cut(s) 156, 749, 1138, 1170, 1552, 1880, 2123, 2261, 2549
TscAI CASTG 3 cut(s) 208, 1140, 1945
TseFI GTSAC 2 cut(s) 119, 2537
TseI GCWGC 5 cut(s) 245, 808, 1989, 2399, 2402
Tsp45I GTSAC 2 cut(s) 119, 2537
TspDTI ATGAA 6 cut(s) 17, 666, 762, 1477, 2147, 2220
TspGWI ACGGA 3 cut(s) 447, 561, 1616
TspRI CASTG 3 cut(s) 208, 1140, 1945
Tth111I GACNNNGTC 1 cut(s) 2188
Van91I CCANNNNNTGG 1 cut(s) 723
Vha464I CTTAAG 1 cut(s) 1511
VpaK11BI GGWCC 3 cut(s) 532, 877, 1018
XagI CCTNNNNNAGG 1 cut(s) 2702
XapI RAATTY 7 cut(s) 196, 278, 827, 1633, 2054, 2592, 2801
XceI RCATGY 2 cut(s) 821, 1793
XhoI CTCGAG 1 cut(s) 952
XmiI GTMKAC 2 cut(s) 81, 871
XmnI GAANNNNTTC 3 cut(s) 11, 968, 1101
XspI CTAG 9 cut(s) 36, 465, 507, 1286, 1331, 1527, 1961, 2396, 2777
ZrmI AGTACT 1 cut(s) 2712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.