Rroxscaffold_4G00291730

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0003790
Physical Location & Seq
Forward (+)
12120177 .. 12126753
6577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00291730.1

Sequence Viewer

Length: 3024 bp
ATGTTTCACGAGGGATCTAGAGGCGGGATTGATGAGCTATGGTACCAAATCTGGGCGGGTATGGCTGTGTTAGGCGGGGCGTGGCTGTGCAGAGGGATGGGCGTTGGGTTAGGCAGGGTGTGGCTGTGCAGGTGGTTTTTGGGAGGTGGTTCGATGGTGGAGGGTTGGGTGGTTGCAGCTATATTGCTTCTCGGTTGTATTACAGAGTCCATTGATACCGGCGCCAATCCAGCAGTGGGTGTTCTTGGTAGTTTGGCGGCGGTTCATCTCGGCAGTCAAAGTAATGGGGAGAAGCTCCTGCACATGGTCTGGTGGTTTTGGGTCATGGTGTTGAAGGGAGTATCGATCTTTCCTATTGAGGTTGGCTGTGAGGATGTACTTTGTCTCCTAAGTTCTGAGAGATCCCATCTGCAATGGAAACAACAAATCCCTCCATCAACTGATAAGCAAGTATACTGGGAAAACCCATCAGAAAATGGAAGTCAAGTTGGTGACATTGCTGATAATAGTTTTCAAAGCCCTAAAGGATTCTTTTCTAAATCTCGAAAGCAGGTCTCTGATAACAAGAATTCCAGTGAGAGTCCAGGCCTTAGAAGGAGCCGGTCATTATCATCAGCAGCCTTCCTTGTAAGTGAGCCGGTGCAAGCAGAATTTTCTTCTTCAAGATATCAGATTGTCGGACTTTTTACCCCTGAGAGGCATCAGGCTAAAGAGTTAGAAGTTCCAGCTGTTCAAAACACACACGGATTAGAACGACCTGGTTCTGCTGGTTCTCCTAGAATACAGCATGGTTCGTCAGGGAGCTCTTCTACTTGCTCTAGTAATGTCTCATCCAAAGTTTTGGACCGCTATATAGACGGAGAGCAGGAGGAAAGGGGCAGACAAGAGAACAATTCTTCCCATAGAAACTTCAATGGGATTGGAAACGGTGGTGGATGGCGCCCTCCGCGAGTTCAGATTACAGCCCCCAGTTCACCCAGGGCTCATTCATTTAGAGAGGCCAAAAGTTCTCGTTATCGTCTATCATCCAAAGATTGGGTCGAAAATGGATTTGGGCATGAATCTCCCAGGAGACTTGCAAAGAATGTTGTGGAGAGGCTCTCACAGTCTCATGTCACGCAGCCATCACATGCAAAGGAATTTGACCATGACATCCCACTCACCATTGAGGATATATATGGTAGACCGGACCTGGTAAGCCAGAAAACCTATCCTTTGGATGAACCTTATGACACAATTAGTAAATATCATGGGGATGATTACTCGAGCTTGCAGAAACAGTTCTATGGAGAGAAGTGTAATGGTTTAAACTCTGATGAGACTGGAGAGGACCTGGATGTGGTATTACAAAGAAGACTGGAGGAAGCTGAGGAGAAGGTCATGCTTCTGTCTGAAGAACTGGAGCAGGAAAGCTTTCTTAGAGATAGTGGGTACAATGTGCCATCACTGATTCAGACAATTAGAAACCTAACAGAGCAGAGAATCAGCTTTGCACTTGAGGTTTCAAACCTCCTTCAATTACGAATTGCTGAGAGGGCCTCTGCCAAGAAAGAATTGAGACTGGCAAACGCAGAACTTGAGTCTCGAACCAGAAGACTAGAGAAGGAGAAGAATGAGTTACAGTCAGCATTGGAGACAGAACTAGATCGAAGGTCAACTGACTGGTCACTCAAGCTGGACAAATATCAGTCGGAAGAGCAGAGGCTTCAGCAACAGCTTAAGGGGCTCACTACTAGGATGGAGGAAATGAGAGAGGAGAATCAAGGCCTACAAGAAAATCTCTCGGAATTGCAAGAGAAGTACAGAGCATCAGAGGAAGATCGTGTTTGTCTCCGTAAGAATTTTGAAGAGAGGGATAAGGAGTGCAAGGATTTGCATAAATCCATTACAAGATTATTAAGAACCTGCAGAGAACAAGAGAAGACAATTGATGGGTTGCGTGAAGGTTTTAGTGAGGAGTTCGGGAAAAATCAATCATTGGAGAGGTTTGATAAGCATGTTTCAAAATTGCAGATGGAGCAAATGAGGTTGACAGGAGTAGAACTGGGTTTAAGGAGAGAGTTGGACTCTCAAAGGCTTGAAGTTGATTCTCTTAGGCATGAGAATATACACTTGTTAGACCGTTTGAGGGGCAATGGGAAAGACAGTGGTGCGTTAACTTTCAAGCTAGATAAGGAGATGTGGGCGCGGGTCGGCTGCTTGCAAAATCAAGGGCTATCACTCCTAAATGAGAGCTCCCAGTTGTGTTCAGATTTTCTGGAATTTGTCAAAAGAAAAGCAGGCCATCTCCAAGAAGCTAAGCAGGGTTTGGATGCACAATTTTTTGTTGAATCTGAAATGAAAGTGCAGGGGTTAAAGCGTGGAACTGAAAGCTTAACCAGAAGTTTGCAGACAATGTCTGCTTTGTTCCATGAAAAGTCCAGTCTGGCCGCATCAAAATATCAATCTAAGTGCATGGATGCTGACGAATCAGGACATTCAAATGATCAAATCCCAGAGGACGATATGAGATATAAGCTTCAATCAGAAACTATACTTACAAGTTTACTAAGAGAGAAGATACATTCTAAAGAGCTGGAAGTTGAGCAGTTGCAAGCTGAACTAGCTGCAGCTGTAAGAGGAAATGACATCCTTAGATGTGAAGTTCAAAATGCAATGGACGACCTTTCCTGTCTCACCCACAAGTTGAAAGACGTTGAACTACTGATGCTCAAGAAGGATGATAACATAAACAAGCTTCAAAGTGACCTCCAAGAATCTACAAAGGAATTAACAGTTACACGAGGGATACTGCCTAAAATTTCAGAAGAGAGAGATATGATGTGGGAGGAGGTGAAAAAGTACAATGAGAAGAATATGCTGTTGAACTCGGAGGTTAATCTGTTGAAGAAGAAGATAGAGACCCTTGATGAGGAAGTACTCTTCAAAGAAGGCCAGATTACAATCCTGAAAGATACATTAGGGAACAAACCGTTTGATCTTCTAGCGAGTCCTGATAATACACGAGAATTTCTGGTTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1007

Amino Acids

114.53

Weight (kDa)

5.62

Isoelectric Point (pI)

55.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7653 PF24670 684 - 807 8.8e-55 Domain of unknown function (DUF7653)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 120
Acc36I ACCTGC 3 cut(s) 120, 541, 1913
Acc65I GGTACC 1 cut(s) 42
AccB1I GGYRCC 3 cut(s) 42, 221, 939
AccB7I CCANNNNNTGG 1 cut(s) 1035
AccI GTMKAC 2 cut(s) 453, 1183
AccII CGCG 2 cut(s) 949, 2188
AciI CCGC 9 cut(s) 24, 56, 75, 257, 260, 847, 947, 2188, 2430
AclWI GGATC 2 cut(s) 22, 396
AcoI YGGCCR 1 cut(s) 2427
AcsI RAATTY 7 cut(s) 568, 650, 1139, 1840, 2261, 2799, 3008
AcuI CTGAAG 2 cut(s) 1413, 1691
AcyI GRCGYC 2 cut(s) 222, 940
AfaI GTAC 6 cut(s) 44, 378, 1433, 1802, 2843, 2919
AfiI CCNNNNNNNGG 8 cut(s) 52, 236, 304, 696, 1035, 1339, 2128, 2911
AflII CTTAAG 1 cut(s) 1718
AjnI CCWGG 6 cut(s) 583, 757, 977, 1067, 1191, 1332
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
AloI GAACNNNNNNTCC 2 cut(s) 881, 913
Alw21I GWGCWC 2 cut(s) 806, 2237
AlwI GGATC 2 cut(s) 22, 396
Ama87I CYCGRG 1 cut(s) 1264
AoxI GGCC 7 cut(s) 586, 999, 1536, 1765, 2281, 2427, 2932
ApeKI GCWGC 6 cut(s) 176, 617, 1120, 2196, 2606, 2609
ApoI RAATTY 7 cut(s) 568, 650, 1139, 1840, 2261, 2799, 3008
ArsI GACNNNNNNTTYG 2 cut(s) 1023, 1055
Asp700I GAANNNNTTC 2 cut(s) 1280, 1413
Asp718I GGTACC 1 cut(s) 42
AspLEI GCGC 3 cut(s) 224, 942, 2188
AspS9I GGNCC 4 cut(s) 844, 1189, 1330, 1536
AsuHPI GGTGA 5 cut(s) 503, 966, 1153, 2668, 2845
AvaI CYCGRG 1 cut(s) 1264
AvaII GGWCC 3 cut(s) 844, 1189, 1330
BanI GGYRCC 3 cut(s) 42, 221, 939
BanII GRGCYC 4 cut(s) 806, 985, 1728, 2237
BauI CACGAG 3 cut(s) 8, 2781, 3003
BbsI GAAGAC 3 cut(s) 1360, 1600, 1928
Bbv12I GWGCWC 2 cut(s) 806, 2237
BbvCI CCTCAGC 1 cut(s) 1368
BbvI GCAGC 6 cut(s) 188, 629, 1132, 2183, 2593, 2621
BciT130I CCWGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
BciVI GTATCC 1 cut(s) 2781
BclI TGATCA 1 cut(s) 2485
BfaI CTAG 9 cut(s) 18, 777, 819, 1598, 1643, 1734, 2168, 2603, 2984
BfmI CTRYAG 2 cut(s) 1906, 2607
BfoI RGCGCY 2 cut(s) 225, 943
BfrI CTTAAG 1 cut(s) 1718
BfuAI ACCTGC 3 cut(s) 120, 541, 1913
BfuI GTATCC 1 cut(s) 2781
BisI GCNGC 8 cut(s) 177, 258, 618, 1121, 2197, 2430, 2607, 2610
BlpI GCTNAGC 1 cut(s) 2298
BlsI GCNGC 8 cut(s) 178, 259, 619, 1122, 2198, 2431, 2608, 2611
BmcAI AGTACT 1 cut(s) 2919
Bme1390I CCNGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
Bme18I GGWCC 3 cut(s) 844, 1189, 1330
BmeT110I CYCGRG 1 cut(s) 1264
BmgT120I GGNCC 4 cut(s) 844, 1189, 1330, 1536
BmiI GGNNCC 4 cut(s) 44, 223, 599, 941
BmrFI CCNGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
BmrI ACTGGG 4 cut(s) 466, 963, 2054, 2233
BmsI GCATC 6 cut(s) 709, 1817, 2302, 2441, 2449, 2697
BmuI ACTGGG 4 cut(s) 466, 963, 2054, 2233
BpiI GAAGAC 3 cut(s) 1360, 1600, 1928
BplI GAGNNNNNCTC 6 cut(s) 1085, 1117, 1523, 1555, 2051, 2083
BpmI CTGGAG 3 cut(s) 1344, 1379, 1421
Bpu10I CCTNAGC 1 cut(s) 1368
Bpu1102I GCTNAGC 1 cut(s) 2298
BpuEI CTTGAG 4 cut(s) 1517, 1598, 1655, 2696
Bsa29I ATCGAT 1 cut(s) 344
BsaBI GATNNNNATC 1 cut(s) 2942
BsaHI GRCGYC 2 cut(s) 222, 940
BsaI GGTCTC 2 cut(s) 559, 2894
BsaJI CCNNGG 3 cut(s) 977, 978, 1067
BsaWI WCCGGW 1 cut(s) 1186
BsaXI ACNNNNNCTCC 2 cut(s) 369, 399
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 236, 304, 696, 1035, 1339, 2128, 2911
Bse118I RCCGGY 3 cut(s) 218, 600, 637
Bse3DI GCAATG 4 cut(s) 419, 495, 2140, 2661
Bse8I GATNNNNATC 1 cut(s) 2942
BseBI CCWGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
BseCI ATCGAT 1 cut(s) 344
BseDI CCNNGG 3 cut(s) 977, 978, 1067
BseJI GATNNNNATC 1 cut(s) 2942
BseLI CCNNNNNNNGG 8 cut(s) 52, 236, 304, 696, 1035, 1339, 2128, 2911
BseMI GCAATG 4 cut(s) 419, 495, 2140, 2661
BseMII CTCAG 4 cut(s) 387, 684, 1359, 1521
BseRI GAGGAG 4 cut(s) 1385, 1769, 1970, 2843
BseXI GCAGC 6 cut(s) 188, 629, 1132, 2183, 2593, 2621
BsgI GTGCAG 4 cut(s) 109, 148, 284, 2366
Bsh1236I CGCG 2 cut(s) 949, 2188
BshFI GGCC 7 cut(s) 588, 1001, 1538, 1767, 2283, 2429, 2934
BshNI GGYRCC 3 cut(s) 42, 221, 939
BshVI ATCGAT 1 cut(s) 344
BsiHKAI GWGCWC 2 cut(s) 806, 2237
BsiHKCI CYCGRG 1 cut(s) 1264
BsiSI CCGG 4 cut(s) 219, 601, 638, 1187
BslI CCNNNNNNNGG 8 cut(s) 52, 236, 304, 696, 1035, 1339, 2128, 2911
BsnI GGCC 7 cut(s) 588, 1001, 1538, 1767, 2283, 2429, 2934
Bso31I GGTCTC 2 cut(s) 559, 2894
BsoBI CYCGRG 1 cut(s) 1264
Bsp1286I GDGCHC 4 cut(s) 806, 985, 1728, 2237
Bsp143I GATC 7 cut(s) 14, 345, 401, 1645, 1819, 2485, 2977
Bsp1720I GCTNAGC 1 cut(s) 2298
BspACI CCGC 9 cut(s) 24, 56, 75, 257, 260, 847, 947, 2188, 2430
BspANI GGCC 7 cut(s) 588, 1001, 1538, 1767, 2283, 2429, 2934
BspCNI CTCAG 4 cut(s) 388, 685, 1360, 1522
BspDI ATCGAT 1 cut(s) 344
BspFNI CGCG 2 cut(s) 949, 2188
BspLI GGNNCC 4 cut(s) 44, 223, 599, 941
BspMAI CTGCAG 2 cut(s) 1910, 2611
BspMI ACCTGC 3 cut(s) 120, 541, 1913
BspPI GGATC 2 cut(s) 22, 396
BspQI GCTCTTC 2 cut(s) 811, 1689
BspT107I GGYRCC 3 cut(s) 42, 221, 939
BspTI CTTAAG 1 cut(s) 1718
BspTNI GGTCTC 2 cut(s) 559, 2894
BsrDI GCAATG 4 cut(s) 419, 495, 2140, 2661
BsrFI RCCGGY 3 cut(s) 218, 600, 637
BssAI RCCGGY 3 cut(s) 218, 600, 637
BssECI CCNNGG 3 cut(s) 977, 978, 1067
BssMI GATC 7 cut(s) 14, 345, 401, 1645, 1819, 2485, 2977
BssNAI GTATAC 1 cut(s) 454
BssNI GRCGYC 2 cut(s) 222, 940
BssSI CACGAG 3 cut(s) 8, 2781, 3003
Bst1107I GTATAC 1 cut(s) 454
Bst2BI CACGAG 3 cut(s) 8, 2781, 3003
Bst2UI CCWGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
Bst4CI ACNGT 8 cut(s) 929, 1107, 1281, 1623, 2123, 2147, 2776, 2973
Bst6I CTCTTC 5 cut(s) 811, 1689, 1842, 2802, 2927
BstACI GRCGYC 2 cut(s) 222, 940
BstAFI CTTAAG 1 cut(s) 1718
BstC8I GCNNGC 5 cut(s) 645, 1271, 2201, 2281, 2595
BstENI CCTNNNNNAGG 1 cut(s) 2909
BstFNI CGCG 2 cut(s) 949, 2188
BstH2I RGCGCY 2 cut(s) 225, 943
BstHHI GCGC 3 cut(s) 224, 942, 2188
BstKTI GATC 7 cut(s) 17, 348, 404, 1648, 1822, 2488, 2980
BstMBI GATC 7 cut(s) 14, 345, 401, 1645, 1819, 2485, 2977
BstMWI GCNNNNNNNGC 7 cut(s) 62, 230, 946, 1535, 1723, 2017, 2603
BstNI CCWGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
BstNSI RCATGY 2 cut(s) 1133, 2000
BstSCI CCNGG 6 cut(s) 583, 757, 977, 1067, 1191, 1332
BstSFI CTRYAG 2 cut(s) 1906, 2607
BstUI CGCG 2 cut(s) 949, 2188
BstV1I GCAGC 6 cut(s) 188, 629, 1132, 2183, 2593, 2621
BstV2I GAAGAC 3 cut(s) 1360, 1600, 1928
BstX2I RGATCY 2 cut(s) 14, 401
BstXI CCANNNNNNTGG 1 cut(s) 841
BstYI RGATCY 2 cut(s) 14, 401
BstZ17I GTATAC 1 cut(s) 454
Bsu15I ATCGAT 1 cut(s) 344
BsuI GTATCC 1 cut(s) 2781
BsuRI GGCC 7 cut(s) 588, 1001, 1538, 1767, 2283, 2429, 2934
BsuTUI ATCGAT 1 cut(s) 344
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 4 cut(s) 240, 580, 1445, 2152
BveI ACCTGC 3 cut(s) 120, 541, 1913
Cac8I GCNNGC 5 cut(s) 645, 1271, 2201, 2281, 2595
CfoI GCGC 3 cut(s) 224, 942, 2188
Cfr10I RCCGGY 3 cut(s) 218, 600, 637
Cfr13I GGNCC 4 cut(s) 844, 1189, 1330, 1536
ClaI ATCGAT 1 cut(s) 344
CsiI ACCWGGT 2 cut(s) 757, 1191
Csp6I GTAC 6 cut(s) 43, 377, 1432, 1801, 2842, 2918
CviQI GTAC 6 cut(s) 43, 377, 1432, 1801, 2842, 2918
DinI GGCGCC 2 cut(s) 223, 941
DpnI GATC 7 cut(s) 16, 347, 403, 1647, 1821, 2487, 2979
DpnII GATC 7 cut(s) 14, 345, 401, 1645, 1819, 2485, 2977
DraI TTTAAA 1 cut(s) 1308
EaeI YGGCCR 1 cut(s) 2427
Eam1104I CTCTTC 5 cut(s) 811, 1689, 1842, 2802, 2927
EarI CTCTTC 5 cut(s) 811, 1689, 1842, 2802, 2927
Ecl136II GAGCTC 2 cut(s) 804, 2235
Eco147I AGGCCT 2 cut(s) 588, 1767
Eco24I GRGCYC 4 cut(s) 806, 985, 1728, 2237
Eco31I GGTCTC 2 cut(s) 559, 2894
Eco32I GATATC 1 cut(s) 668
Eco47I GGWCC 3 cut(s) 844, 1189, 1330
Eco53kI GAGCTC 2 cut(s) 804, 2235
Eco57I CTGAAG 2 cut(s) 1413, 1691
Eco88I CYCGRG 1 cut(s) 1264
EcoICRI GAGCTC 2 cut(s) 804, 2235
EcoNI CCTNNNNNAGG 1 cut(s) 2909
EcoO109I RGGNCCY 2 cut(s) 1330, 1536
EcoRI GAATTC 1 cut(s) 568
EcoRII CCWGG 6 cut(s) 583, 757, 977, 1067, 1191, 1332
EcoRV GATATC 1 cut(s) 668
EcoT38I GRGCYC 4 cut(s) 806, 985, 1728, 2237
EgeI GGCGCC 2 cut(s) 223, 941
EheI GGCGCC 2 cut(s) 223, 941
FauI CCCGC 4 cut(s) 17, 49, 68, 2181
FbaI TGATCA 1 cut(s) 2485
FblI GTMKAC 2 cut(s) 453, 1183
Fnu4HI GCNGC 8 cut(s) 177, 258, 618, 1121, 2197, 2430, 2607, 2610
FriOI GRGCYC 4 cut(s) 806, 985, 1728, 2237
Fsp4HI GCNGC 8 cut(s) 177, 258, 618, 1121, 2197, 2430, 2607, 2610
FspBI CTAG 9 cut(s) 18, 777, 819, 1598, 1643, 1734, 2168, 2603, 2984
GlaI GCGC 3 cut(s) 223, 941, 2187
GluI GCNGC 8 cut(s) 177, 258, 618, 1121, 2197, 2430, 2607, 2610
GsuI CTGGAG 3 cut(s) 1344, 1379, 1421
HaeII RGCGCY 2 cut(s) 225, 943
HaeIII GGCC 7 cut(s) 588, 1001, 1538, 1767, 2283, 2429, 2934
HapII CCGG 4 cut(s) 219, 601, 638, 1187
HhaI GCGC 3 cut(s) 224, 942, 2188
Hin1I GRCGYC 2 cut(s) 222, 940
Hin6I GCGC 3 cut(s) 222, 940, 2186
HinP1I GCGC 3 cut(s) 222, 940, 2186
HincII GTYRAC 3 cut(s) 1656, 2031, 2157
HindII GTYRAC 3 cut(s) 1656, 2031, 2157
HindIII AAGCTT 4 cut(s) 1411, 2371, 2516, 2735
HpaI GTTAAC 1 cut(s) 2157
HpaII CCGG 4 cut(s) 219, 601, 638, 1187
HphI GGTGA 5 cut(s) 503, 966, 1153, 2668, 2845
Hpy166II GTNNAC 7 cut(s) 454, 974, 1184, 1656, 2031, 2157, 2546
Hpy8I GTNNAC 7 cut(s) 454, 974, 1184, 1656, 2031, 2157, 2546
HpyCH4III ACNGT 8 cut(s) 929, 1107, 1281, 1623, 2123, 2147, 2776, 2973
HpyCH4IV ACGT 1 cut(s) 2694
HpyF10VI GCNNNNNNNGC 7 cut(s) 62, 230, 946, 1535, 1723, 2017, 2603
HpySE526I ACGT 1 cut(s) 2694
Hsp92I GRCGYC 2 cut(s) 222, 940
HspAI GCGC 3 cut(s) 222, 940, 2186
KasI GGCGCC 2 cut(s) 221, 939
KpnI GGTACC 1 cut(s) 46
Ksp22I TGATCA 1 cut(s) 2485
KspAI GTTAAC 1 cut(s) 2157
Kzo9I GATC 7 cut(s) 14, 345, 401, 1645, 1819, 2485, 2977
LguI GCTCTTC 2 cut(s) 811, 1689
LmnI GCTCC 6 cut(s) 300, 597, 801, 1402, 2017, 2240
Lsp1109I GCAGC 6 cut(s) 188, 629, 1132, 2183, 2593, 2621
LweI GCATC 6 cut(s) 709, 1817, 2302, 2441, 2449, 2697
MabI ACCWGGT 2 cut(s) 757, 1191
MaeI CTAG 9 cut(s) 18, 777, 819, 1598, 1643, 1734, 2168, 2603, 2984
MaeII ACGT 1 cut(s) 2694
MaeIII GTNAC 6 cut(s) 491, 1114, 1617, 1665, 2744, 2776
MalI GATC 7 cut(s) 16, 347, 403, 1647, 1821, 2487, 2979
MboI GATC 7 cut(s) 14, 345, 401, 1645, 1819, 2485, 2977
MfeI CAATTG 1 cut(s) 1926
MflI RGATCY 2 cut(s) 14, 401
MhlI GDGCHC 4 cut(s) 806, 985, 1728, 2237
Mly113I GGCGCC 2 cut(s) 222, 940
MlyI GAGTC 5 cut(s) 215, 589, 1589, 2060, 2998
MmeI TCCRAC 3 cut(s) 658, 1671, 2043
MroXI GAANNNNTTC 2 cut(s) 1280, 1413
MseI TTAA 9 cut(s) 1307, 1719, 1898, 2051, 2156, 2354, 2375, 2771, 2877
MslI CAYNNNNRTG 2 cut(s) 1254, 2481
MspA1I CMGCKG 2 cut(s) 728, 2612
MspCI CTTAAG 1 cut(s) 1718
MspI CCGG 4 cut(s) 219, 601, 638, 1187
MspR9I CCNGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
MssI GTTTAAAC 1 cut(s) 1308
MunI CAATTG 1 cut(s) 1926
MvaI CCWGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
MvnI CGCG 2 cut(s) 949, 2188
MwoI GCNNNNNNNGC 7 cut(s) 62, 230, 946, 1535, 1723, 2017, 2603
NarI GGCGCC 2 cut(s) 222, 940
NdeII GATC 7 cut(s) 14, 345, 401, 1645, 1819, 2485, 2977
NlaIV GGNNCC 4 cut(s) 44, 223, 599, 941
NmeAIII GCCGAG 1 cut(s) 249
NmuCI GTSAC 4 cut(s) 491, 1114, 1665, 2744
NspI RCATGY 2 cut(s) 1133, 2000
PaeR7I CTCGAG 1 cut(s) 1264
PaqCI CACCTGC 1 cut(s) 120
PasI CCCWGGG 1 cut(s) 978
PceI AGGCCT 2 cut(s) 588, 1767
PciSI GCTCTTC 2 cut(s) 811, 1689
PdmI GAANNNNTTC 2 cut(s) 1280, 1413
PfeI GAWTC 9 cut(s) 528, 1061, 1450, 1482, 1759, 2087, 2330, 2468, 2756
PflFI GACNNNGTC 1 cut(s) 2395
PflMI CCANNNNNTGG 1 cut(s) 1035
PkrI GCNGC 8 cut(s) 178, 259, 619, 1122, 2198, 2431, 2608, 2611
PleI GAGTC 5 cut(s) 214, 588, 1588, 2060, 2997
PluTI GGCGCC 2 cut(s) 225, 943
PmeI GTTTAAAC 1 cut(s) 1308
PpsI GAGTC 5 cut(s) 214, 588, 1588, 2060, 2997
PpuMI RGGWCCY 1 cut(s) 1330
Psp124BI GAGCTC 2 cut(s) 806, 2237
Psp5II RGGWCCY 1 cut(s) 1330
Psp6I CCWGG 6 cut(s) 583, 757, 977, 1067, 1191, 1332
PspGI CCWGG 6 cut(s) 583, 757, 977, 1067, 1191, 1332
PspN4I GGNNCC 4 cut(s) 44, 223, 599, 941
PspPI GGNCC 4 cut(s) 844, 1189, 1330, 1536
PspPPI RGGWCCY 1 cut(s) 1330
PspXI VCTCGAGB 1 cut(s) 1264
PstI CTGCAG 2 cut(s) 1910, 2611
PsuI RGATCY 2 cut(s) 14, 401
PsyI GACNNNGTC 1 cut(s) 2395
PvuII CAGCTG 2 cut(s) 728, 2612
RsaI GTAC 6 cut(s) 44, 378, 1433, 1802, 2843, 2919
RsaNI GTAC 6 cut(s) 43, 377, 1432, 1801, 2842, 2918
RseI CAYNNNNRTG 2 cut(s) 1254, 2481
SacI GAGCTC 2 cut(s) 806, 2237
SapI GCTCTTC 2 cut(s) 811, 1689
SaqAI TTAA 9 cut(s) 1307, 1719, 1898, 2051, 2156, 2354, 2375, 2771, 2877
SatI GCNGC 8 cut(s) 177, 258, 618, 1121, 2197, 2430, 2607, 2610
Sau3AI GATC 7 cut(s) 14, 345, 401, 1645, 1819, 2485, 2977
Sau96I GGNCC 4 cut(s) 844, 1189, 1330, 1536
ScaI AGTACT 1 cut(s) 2919
SchI GAGTC 5 cut(s) 215, 589, 1589, 2060, 2998
ScrFI CCNGG 6 cut(s) 585, 759, 979, 1069, 1193, 1334
SduI GDGCHC 4 cut(s) 806, 985, 1728, 2237
SexAI ACCWGGT 2 cut(s) 757, 1191
SfaNI GCATC 6 cut(s) 709, 1817, 2302, 2441, 2449, 2697
SfcI CTRYAG 2 cut(s) 1906, 2607
SfoI GGCGCC 2 cut(s) 223, 941
Sfr274I CTCGAG 1 cut(s) 1264
SinI GGWCC 3 cut(s) 844, 1189, 1330
SlaI CTCGAG 1 cut(s) 1264
SmiMI CAYNNNNRTG 2 cut(s) 1254, 2481
SmlI CTYRAG 6 cut(s) 1264, 1496, 1577, 1670, 1718, 2711
SmoI CTYRAG 6 cut(s) 1264, 1496, 1577, 1670, 1718, 2711
SseBI AGGCCT 2 cut(s) 588, 1767
SsiI CCGC 9 cut(s) 24, 56, 75, 257, 260, 847, 947, 2188, 2430
SspDI GGCGCC 2 cut(s) 221, 939
SspMI CTAG 9 cut(s) 18, 777, 819, 1598, 1643, 1734, 2168, 2603, 2984
SstI GAGCTC 2 cut(s) 806, 2237
StuI AGGCCT 2 cut(s) 588, 1767
StyD4I CCNGG 6 cut(s) 583, 757, 977, 1067, 1191, 1332
TaaI ACNGT 8 cut(s) 929, 1107, 1281, 1623, 2123, 2147, 2776, 2973
TaiI ACGT 1 cut(s) 2697
TaqI TCGA 8 cut(s) 152, 344, 544, 1041, 1265, 1585, 1648, 3019
TatI WGTACW 4 cut(s) 376, 1800, 2841, 2917
TauI GCSGC 2 cut(s) 260, 2432
TfiI GAWTC 9 cut(s) 528, 1061, 1450, 1482, 1759, 2087, 2330, 2468, 2756
Tru1I TTAA 9 cut(s) 1307, 1719, 1898, 2051, 2156, 2354, 2375, 2771, 2877
Tru9I TTAA 9 cut(s) 1307, 1719, 1898, 2051, 2156, 2354, 2375, 2771, 2877
TscAI CASTG 4 cut(s) 240, 580, 1452, 2152
TseFI GTSAC 4 cut(s) 491, 1114, 1665, 2744
TseI GCWGC 6 cut(s) 176, 617, 1120, 2196, 2606, 2609
Tsp45I GTSAC 4 cut(s) 491, 1114, 1665, 2744
TspDTI ATGAA 6 cut(s) 254, 978, 1074, 1236, 2354, 2427
TspGWI ACGGA 3 cut(s) 759, 873, 1823
TspRI CASTG 4 cut(s) 240, 580, 1452, 2152
Tth111I GACNNNGTC 1 cut(s) 2395
Van91I CCANNNNNTGG 1 cut(s) 1035
Vha464I CTTAAG 1 cut(s) 1718
VpaK11BI GGWCC 3 cut(s) 844, 1189, 1330
XagI CCTNNNNNAGG 1 cut(s) 2909
XapI RAATTY 7 cut(s) 568, 650, 1139, 1840, 2261, 2799, 3008
XbaI TCTAGA 1 cut(s) 17
XceI RCATGY 2 cut(s) 1133, 2000
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XhoI CTCGAG 1 cut(s) 1264
XmiI GTMKAC 2 cut(s) 453, 1183
XmnI GAANNNNTTC 2 cut(s) 1280, 1413
XspI CTAG 9 cut(s) 18, 777, 819, 1598, 1643, 1734, 2168, 2603, 2984
ZrmI AGTACT 1 cut(s) 2919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.