FvH4_7g20660

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0003790
Physical Location & Seq
Reverse (-)
16738549 .. 16745069
6521 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g20660.t3

Sequence Viewer

Length: 2781 bp
ATGAAGAAGCTCTTCTTTTTCAGATCTTCTGCTTCTAGCAATGGAAAGGACAAATCCCCTCCGTCAACTGATAAGCAAGTATACTGGGAAAACATGTCAGAAAAGGGAAGTCAAGTTGGTGACAAGGCTGACAATAGTTTTCAAAGTCCTAAAGGATTATTTTCTAAATCTCGAAAGCAGGTCTCTGATATCCAGAATTCCAGTGAGAGTCCAGGACTTAGAAGGAGCCGCTCATTATCATCAGCAGCCTTTCTTGTAAGTGAGCCGGTGCAAGCAGAATTTTCTTCTTCGAGATTTCAGAGTAGATCTCCTTGTAGTAGTACAAGTAGTATTCCTCATCGACAATGTGCCCAATCATCTTGTTGTCGGACTTTTACCCCTGAGAGGCATCAGGTTAAACAGTTTGAAGTTCCAGCTGTTCAAAACACACATGGACTAGAACGACCTGGCTCTGCTGGTTCTCCTAGAATTCAGCATGGTTCGTCAGGTAGCTCTTCTACTTGCTCTAGTAATGTCTCATCCAAAGTTCTGGACCGCTACATAGATGGAGAGCAGGAGGAAAGCGGCAGACAAGAGAACAGTTCTTCCCATAGAAATGGGAATGGAAATGGTGGTGGATGGCGCCCTCCACGAGTTCAGATCACAGCCCCCAGTTCACCCAGGGCTCATTCATTTAGAGAGGCCAAAAGTTCTCGTTATCATCCATCATCCAAAGATTGGGCCGAAAACGGATTTGGGCATGAATCTCCCAGGAGACTTGCAAAGAATGTTGTGGAGAGACTCTCACAGTTTCATGTCATGCAGCCGTCACACGCAAAGGAGTTTGACCATGACATCCCACTCACCATTGAGGATATCTATGGAAGACCAGACCTGGTAAGCCAGAAAACTTATCCTTTGGATGAACCTTATGATCACTCGAGCTTGCAGAAACAGTTCTATGGAGAGAAGTGTAATGGTCTAAACTCTGATGAGATTGGAGAGGACCTAGATGTGGAATTACAAAGGAGACTGGAGGAAGCTGAGGAGAAAGTCATGATTCTCTCTGAAGAACTTGAGCAGGAAAGCTTTCTTAGAGACACTGGGTACAATGTGCCATCACTGATTCAGACAATTCGAAACCTAACAGAGCAGAGAGTCAGCTTTGCACTTGAGGTTTCAAACCTCCTTCAGTTACGAATTGCTGAGAGGGCCTCTGCCAAGAAAGAATTGAGACTGGCAAAGGCAGAACTTGAGTCACGAACCAGAAGACTAGAGAAGGAGAAGAATGAGTTACAGTCAGCACTGGAGACAGAACTAGACCGAAGGTCGACTGACTGGTCACTTAAGCTTGACAAATATCAGTCTGAAGAGCAGAGGCTTCGTGAACGAGTTAGAGAGCTTGCAGAGCAAAATGTCTCACTTCAAAGAGAAGTCTCTTCGTTTCATGTGAGGGAAACTGAGAGTAGAAGTTTCATGACAAATGCTGAGCAACAGGTTAAGGGACTCACTACTAGGATGGAGGAAATGAGAGAGGAAAATCAAGGTCTACAAGAAAATCTCTCGGAATTACAAGAGAAGTACAGAGCATCTGAGGAAGATCGTGTTTGCCTCCGTAAGAATTTTGAAGACAGGGATACGGAGTGCAAGGATTTGCATAAATCCATTACAAGATTATTAAGAACCTGCCGTGAACAAGAGAAGACTATCGATGGGTTGCGTGAAGGTTTTAGTGAGGAGTTCAGGAAAAACCAATCATCGGAGAGGTTTGATAAGCATGTTTCAAAATTGCAGATGGAGCAAATGAGGTTGACAGGAGTAGAACTTGCCTTAAGGAAAGAGTTGGAATCACAAAGGCTTGAAGTTGATTCTCTTAGGCATGAGAATATACACTTGTTAGACCGTTTGAGAGGCAGTGGGAAAGACAGTGGTGCTTTAACTTTCAAGCTAGATAAGGAGATGTGGGCGCGGGTCGGCTGCTTGCAAAATCAAGGGCTATCACTCCTTAATGAGAGCTCCCAGTTGTGTTCTGATTTTCTGGAATTTTTCAAAGGAAAGGCAGGCCAACTTCAAGAAGCTAAGCAGGGTTTGGATGCACAATTTTTTGTTGAATATGAAATGAAAGTACAGGGATTAAAGCGTGGAACTGAAAACTTAACCAGAAGTTTGCAGAAAATGTCTGATTTGTTCCATGAAAAATCCAGTCTGGCCACTTCAAATTATCAATCTAAGTGCATGGATGCTGAAGAAGGACACCCTAATGATCAAACCCCAGAGGAGGACACGAAATATAAGCTTCAATCTGAAACTCTACTCACAAGTTTACTGAGAGAGAAGATACATTCTAAAGAGCTAGAAGTGGAGCAGTTGCAAGCTGAACTTGCTGCAGCTGTAAGAGGAAATGACATCCTCAGATGTGAAGTTCAGAATGCAATGGACAACCTTTCCTGTCTCACCCACAAATTGAAAGATGTTGAATTACTGATGCTCAAGAAGGATGATAACATCAACAAGCTTCAAAGTGACCTCCAAGAATCTACAAAGGAGTTAACAGTTACGCGAGGGATACTGCCTAAAATTTCAGAAGAGAGAGATATGATGTGGGAGGAAGTGAAAAAGTACAATGAGAAGAATATGCTATTGAACTCAGAGGTTAACTTGTTGAAGAAGAAGATAGAGACACTTGATGAGGAAGTACTCTTCAAAGAAGGCCAGATCACAATCCTGAAAGATACCTTAGGGAACAAATCATTTGATCTTCTAGCGAGTCCTGATAATACACGAGAGTTTCTGCTTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

927

Amino Acids

106.19

Weight (kDa)

5.93

Isoelectric Point (pI)

60.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7653 PF24670 603 - 727 1.1e-55 Domain of unknown function (DUF7653)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1318
Acc36I ACCTGC 2 cut(s) 169, 1673
AccB1I GGYRCC 1 cut(s) 621
AccB7I CCANNNNNTGG 1 cut(s) 717
AccBSI CCGCTC 1 cut(s) 231
AccI GTMKAC 3 cut(s) 81, 1310, 1528
AccII CGCG 2 cut(s) 1948, 2539
AciI CCGC 4 cut(s) 229, 535, 564, 1948
AcoI YGGCCR 1 cut(s) 2187
AcsI RAATTY 6 cut(s) 196, 278, 468, 1600, 2021, 2556
AcuI CTGAAG 4 cut(s) 1068, 1154, 1368, 2244
AcyI GRCGYC 1 cut(s) 622
AfaI GTAC 6 cut(s) 322, 1088, 1562, 2106, 2600, 2676
AfiI CCNNNNNNNGG 5 cut(s) 384, 717, 994, 1738, 2257
AflII CTTAAG 2 cut(s) 1325, 1810
AflIII ACRYGT 1 cut(s) 93
AhdI GACNNNNNGTC 1 cut(s) 1306
AjnI CCWGG 5 cut(s) 211, 445, 659, 749, 873
AjuI GAANNNNNNNTTGG 2 cut(s) 717, 749
AloI GAACNNNNNNTCC 2 cut(s) 569, 601
Alw21I GWGCWC 1 cut(s) 1997
Ama87I CYCGRG 1 cut(s) 919
AoxI GGCC 6 cut(s) 681, 720, 1191, 2041, 2187, 2689
ApeKI GCWGC 5 cut(s) 245, 802, 1956, 2363, 2366
ApoI RAATTY 6 cut(s) 196, 278, 468, 1600, 2021, 2556
Asp700I GAANNNNTTC 3 cut(s) 11, 935, 1068
AspLEI GCGC 2 cut(s) 624, 1948
AspS9I GGNCC 4 cut(s) 532, 720, 985, 1191
AsuHPI GGTGA 4 cut(s) 131, 648, 835, 2425
AsuII TTCGAA 1 cut(s) 1117
AvaI CYCGRG 1 cut(s) 919
AvaII GGWCC 2 cut(s) 532, 985
AxyI CCTNAGG 1 cut(s) 2716
BaeGI GKGCMC 1 cut(s) 352
BalI TGGCCA 1 cut(s) 2189
BanI GGYRCC 1 cut(s) 621
BanII GRGCYC 2 cut(s) 667, 1997
BauI CACGAG 2 cut(s) 630, 2760
BbsI GAAGAC 4 cut(s) 871, 1255, 1614, 1688
Bbv12I GWGCWC 1 cut(s) 1997
BbvCI CCTCAGC 1 cut(s) 1023
BbvI GCAGC 5 cut(s) 257, 814, 1943, 2350, 2378
BccI CCATC 7 cut(s) 539, 612, 712, 1105, 1492, 1685, 1768
BceAI ACGGC 2 cut(s) 790, 1653
BcgI CGANNNNNNTGC 2 cut(s) 1343, 1377
BciT130I CCWGG 5 cut(s) 213, 447, 661, 751, 875
BciVI GTATCC 2 cut(s) 1609, 2538
BclI TGATCA 2 cut(s) 913, 2242
BfmI CTRYAG 1 cut(s) 2364
BfoI RGCGCY 1 cut(s) 625
BfrI CTTAAG 2 cut(s) 1325, 1810
BfuAI ACCTGC 2 cut(s) 169, 1673
BfuI GTATCC 2 cut(s) 1609, 2538
BglII AGATCT 2 cut(s) 23, 305
BisI GCNGC 7 cut(s) 229, 246, 565, 803, 1957, 2364, 2367
BlpI GCTNAGC 2 cut(s) 1467, 2058
BlsI GCNGC 7 cut(s) 230, 247, 566, 804, 1958, 2365, 2368
BmcAI AGTACT 1 cut(s) 2676
Bme1390I CCNGG 5 cut(s) 213, 447, 661, 751, 875
Bme18I GGWCC 2 cut(s) 532, 985
BmeRI GACNNNNNGTC 1 cut(s) 1306
BmeT110I CYCGRG 1 cut(s) 919
BmgT120I GGNCC 4 cut(s) 532, 720, 985, 1191
BmiI GGNNCC 2 cut(s) 227, 623
BmrFI CCNGG 5 cut(s) 213, 447, 661, 751, 875
BmrI ACTGGG 4 cut(s) 94, 645, 1092, 1993
BmsI GCATC 5 cut(s) 397, 1577, 2062, 2209, 2454
BmuI ACTGGG 4 cut(s) 94, 645, 1092, 1993
BpiI GAAGAC 4 cut(s) 871, 1255, 1614, 1688
BplI GAGNNNNNCTC 6 cut(s) 292, 324, 767, 799, 1178, 1210
BpmI CTGGAG 2 cut(s) 1034, 1307
Bpu10I CCTNAGC 1 cut(s) 1023
Bpu1102I GCTNAGC 2 cut(s) 1467, 2058
Bpu14I TTCGAA 1 cut(s) 1117
BpuEI CTTGAG 4 cut(s) 1076, 1172, 1253, 2453
Bsa29I ATCGAT 1 cut(s) 1689
BsaBI GATNNNNATC 1 cut(s) 2699
BsaHI GRCGYC 1 cut(s) 622
BsaI GGTCTC 1 cut(s) 187
BsaJI CCNNGG 3 cut(s) 659, 660, 749
Bsc4I CCNNNNNNNGG 5 cut(s) 384, 717, 994, 1738, 2257
Bse118I RCCGGY 1 cut(s) 265
Bse21I CCTNAGG 1 cut(s) 2716
Bse3DI GCAATG 2 cut(s) 46, 2418
Bse8I GATNNNNATC 1 cut(s) 2699
BseBI CCWGG 5 cut(s) 213, 447, 661, 751, 875
BseCI ATCGAT 1 cut(s) 1689
BseDI CCNNGG 3 cut(s) 659, 660, 749
BseJI GATNNNNATC 1 cut(s) 2699
BseLI CCNNNNNNNGG 5 cut(s) 384, 717, 994, 1738, 2257
BseMI GCAATG 2 cut(s) 46, 2418
BseMII CTCAG 9 cut(s) 372, 1014, 1176, 1431, 1458, 1563, 2297, 2404, 2640
BseRI GAGGAG 3 cut(s) 1040, 1730, 2270
BseSI GKGCMC 1 cut(s) 352
BseXI GCAGC 5 cut(s) 257, 814, 1943, 2350, 2378
Bsh1236I CGCG 2 cut(s) 1948, 2539
BshFI GGCC 6 cut(s) 683, 722, 1193, 2043, 2189, 2691
BshNI GGYRCC 1 cut(s) 621
BshVI ATCGAT 1 cut(s) 1689
BsiHKAI GWGCWC 1 cut(s) 1997
BsiHKCI CYCGRG 1 cut(s) 919
BsiSI CCGG 1 cut(s) 266
BslFI GGGAC 1 cut(s) 1497
BslI CCNNNNNNNGG 5 cut(s) 384, 717, 994, 1738, 2257
BsmFI GGGAC 1 cut(s) 1497
BsmI GAATGC 1 cut(s) 2413
BsnI GGCC 6 cut(s) 683, 722, 1193, 2043, 2189, 2691
Bso31I GGTCTC 1 cut(s) 187
BsoBI CYCGRG 1 cut(s) 919
Bsp119I TTCGAA 1 cut(s) 1117
Bsp1286I GDGCHC 3 cut(s) 352, 667, 1997
Bsp143I GATC 8 cut(s) 23, 305, 639, 913, 1579, 2242, 2694, 2734
Bsp1720I GCTNAGC 2 cut(s) 1467, 2058
BspACI CCGC 4 cut(s) 229, 535, 564, 1948
BspANI GGCC 6 cut(s) 683, 722, 1193, 2043, 2189, 2691
BspCNI CTCAG 9 cut(s) 373, 1015, 1177, 1432, 1459, 1564, 2298, 2403, 2639
BspDI ATCGAT 1 cut(s) 1689
BspFNI CGCG 2 cut(s) 1948, 2539
BspHI TCATGA 2 cut(s) 1035, 1455
BspLI GGNNCC 2 cut(s) 227, 623
BspMAI CTGCAG 1 cut(s) 2368
BspMI ACCTGC 2 cut(s) 169, 1673
BspQI GCTCTTC 3 cut(s) 17, 499, 1344
BspT104I TTCGAA 1 cut(s) 1117
BspT107I GGYRCC 1 cut(s) 621
BspTI CTTAAG 2 cut(s) 1325, 1810
BspTNI GGTCTC 1 cut(s) 187
BsrBI CCGCTC 1 cut(s) 231
BsrDI GCAATG 2 cut(s) 46, 2418
BsrFI RCCGGY 1 cut(s) 265
BssAI RCCGGY 1 cut(s) 265
BssECI CCNNGG 3 cut(s) 659, 660, 749
BssMI GATC 8 cut(s) 23, 305, 639, 913, 1579, 2242, 2694, 2734
BssNAI GTATAC 1 cut(s) 82
BssNI GRCGYC 1 cut(s) 622
BssSI CACGAG 2 cut(s) 630, 2760
Bst1107I GTATAC 1 cut(s) 82
Bst2BI CACGAG 2 cut(s) 630, 2760
Bst2UI CCWGG 5 cut(s) 213, 447, 661, 751, 875
Bst4CI ACNGT 8 cut(s) 402, 581, 789, 936, 1278, 1883, 1907, 2533
Bst6I CTCTTC 6 cut(s) 17, 499, 1344, 1423, 2559, 2684
BstACI GRCGYC 1 cut(s) 622
BstAFI CTTAAG 2 cut(s) 1325, 1810
BstBI TTCGAA 1 cut(s) 1117
BstC8I GCNNGC 6 cut(s) 273, 926, 1383, 1961, 2041, 2352
BstFNI CGCG 2 cut(s) 1948, 2539
BstH2I RGCGCY 1 cut(s) 625
BstHHI GCGC 2 cut(s) 624, 1948
BstKTI GATC 8 cut(s) 26, 308, 642, 916, 1582, 2245, 2697, 2737
BstMBI GATC 8 cut(s) 23, 305, 639, 913, 1579, 2242, 2694, 2734
BstMWI GCNNNNNNNGC 4 cut(s) 1190, 1387, 1777, 2360
BstNI CCWGG 5 cut(s) 213, 447, 661, 751, 875
BstNSI RCATGY 2 cut(s) 97, 1760
BstSCI CCNGG 5 cut(s) 211, 445, 659, 749, 873
BstSFI CTRYAG 1 cut(s) 2364
BstSLI GKGCMC 1 cut(s) 352
BstUI CGCG 2 cut(s) 1948, 2539
BstV1I GCAGC 5 cut(s) 257, 814, 1943, 2350, 2378
BstV2I GAAGAC 4 cut(s) 871, 1255, 1614, 1688
BstX2I RGATCY 2 cut(s) 23, 305
BstXI CCANNNNNNTGG 2 cut(s) 529, 596
BstYI RGATCY 2 cut(s) 23, 305
BstZ17I GTATAC 1 cut(s) 82
Bsu15I ATCGAT 1 cut(s) 1689
Bsu36I CCTNAGG 1 cut(s) 2716
BsuI GTATCC 2 cut(s) 1609, 2538
BsuRI GGCC 6 cut(s) 683, 722, 1193, 2043, 2189, 2691
BsuTUI ATCGAT 1 cut(s) 1689
BtsI GCAGTG 1 cut(s) 1900
BtsIMutI CAGTG 6 cut(s) 208, 1080, 1100, 1283, 1900, 1912
BveI ACCTGC 2 cut(s) 169, 1673
Cac8I GCNNGC 6 cut(s) 273, 926, 1383, 1961, 2041, 2352
CciI TCATGA 2 cut(s) 1035, 1455
CfoI GCGC 2 cut(s) 624, 1948
Cfr10I RCCGGY 1 cut(s) 265
Cfr13I GGNCC 4 cut(s) 532, 720, 985, 1191
ClaI ATCGAT 1 cut(s) 1689
CsiI ACCWGGT 1 cut(s) 873
Csp6I GTAC 6 cut(s) 321, 1087, 1561, 2105, 2599, 2675
CviQI GTAC 6 cut(s) 321, 1087, 1561, 2105, 2599, 2675
DinI GGCGCC 1 cut(s) 623
DpnI GATC 8 cut(s) 25, 307, 641, 915, 1581, 2244, 2696, 2736
DpnII GATC 8 cut(s) 23, 305, 639, 913, 1579, 2242, 2694, 2734
DrdI GACNNNNNNGTC 1 cut(s) 1318
DriI GACNNNNNGTC 1 cut(s) 1306
DseDI GACNNNNNNGTC 1 cut(s) 1318
EaeI YGGCCR 1 cut(s) 2187
Eam1104I CTCTTC 6 cut(s) 17, 499, 1344, 1423, 2559, 2684
Eam1105I GACNNNNNGTC 1 cut(s) 1306
EarI CTCTTC 6 cut(s) 17, 499, 1344, 1423, 2559, 2684
Ecl136II GAGCTC 1 cut(s) 1995
Eco24I GRGCYC 2 cut(s) 667, 1997
Eco31I GGTCTC 1 cut(s) 187
Eco32I GATATC 2 cut(s) 190, 856
Eco47I GGWCC 2 cut(s) 532, 985
Eco53kI GAGCTC 1 cut(s) 1995
Eco57I CTGAAG 4 cut(s) 1068, 1154, 1368, 2244
Eco81I CCTNAGG 1 cut(s) 2716
Eco88I CYCGRG 1 cut(s) 919
EcoICRI GAGCTC 1 cut(s) 1995
EcoO109I RGGNCCY 2 cut(s) 985, 1191
EcoRI GAATTC 2 cut(s) 196, 468
EcoRII CCWGG 5 cut(s) 211, 445, 659, 749, 873
EcoRV GATATC 2 cut(s) 190, 856
EcoT38I GRGCYC 2 cut(s) 667, 1997
EgeI GGCGCC 1 cut(s) 623
EheI GGCGCC 1 cut(s) 623
FalI AAGNNNNNCTT 4 cut(s) 28, 31, 2343, 2375
FaqI GGGAC 1 cut(s) 1497
FauI CCCGC 1 cut(s) 1941
FbaI TGATCA 2 cut(s) 913, 2242
FblI GTMKAC 3 cut(s) 81, 1310, 1528
Fnu4HI GCNGC 7 cut(s) 229, 246, 565, 803, 1957, 2364, 2367
FriOI GRGCYC 2 cut(s) 667, 1997
Fsp4HI GCNGC 7 cut(s) 229, 246, 565, 803, 1957, 2364, 2367
GlaI GCGC 2 cut(s) 623, 1947
GluI GCNGC 7 cut(s) 229, 246, 565, 803, 1957, 2364, 2367
GsuI CTGGAG 2 cut(s) 1034, 1307
HaeII RGCGCY 1 cut(s) 625
HaeIII GGCC 6 cut(s) 683, 722, 1193, 2043, 2189, 2691
HapII CCGG 1 cut(s) 266
HhaI GCGC 2 cut(s) 624, 1948
Hin1I GRCGYC 1 cut(s) 622
Hin6I GCGC 2 cut(s) 622, 1946
HinP1I GCGC 2 cut(s) 622, 1946
HincII GTYRAC 5 cut(s) 66, 1311, 1791, 2529, 2635
HindII GTYRAC 5 cut(s) 66, 1311, 1791, 2529, 2635
HindIII AAGCTT 4 cut(s) 1066, 1328, 2273, 2492
HpaI GTTAAC 2 cut(s) 2529, 2635
HpaII CCGG 1 cut(s) 266
HphI GGTGA 4 cut(s) 131, 648, 835, 2425
HpyAV CCTTC 8 cut(s) 216, 1178, 1252, 1299, 1697, 2222, 2467, 2681
HpyCH4III ACNGT 8 cut(s) 402, 581, 789, 936, 1278, 1883, 1907, 2533
HpyF10VI GCNNNNNNNGC 4 cut(s) 1190, 1387, 1777, 2360
Hsp92I GRCGYC 1 cut(s) 622
HspAI GCGC 2 cut(s) 622, 1946
KasI GGCGCC 1 cut(s) 621
Ksp22I TGATCA 2 cut(s) 913, 2242
KspAI GTTAAC 2 cut(s) 2529, 2635
Kzo9I GATC 8 cut(s) 23, 305, 639, 913, 1579, 2242, 2694, 2734
LguI GCTCTTC 3 cut(s) 17, 499, 1344
LmnI GCTCC 4 cut(s) 225, 1777, 2000, 2341
Lsp1109I GCAGC 5 cut(s) 257, 814, 1943, 2350, 2378
LweI GCATC 5 cut(s) 397, 1577, 2062, 2209, 2454
MabI ACCWGGT 1 cut(s) 873
MaeIII GTNAC 8 cut(s) 119, 807, 1173, 1236, 1272, 1320, 2501, 2533
MalI GATC 8 cut(s) 25, 307, 641, 915, 1581, 2244, 2696, 2736
MbiI CCGCTC 1 cut(s) 231
MboI GATC 8 cut(s) 23, 305, 639, 913, 1579, 2242, 2694, 2734
MflI RGATCY 2 cut(s) 23, 305
MhlI GDGCHC 3 cut(s) 352, 667, 1997
MlsI TGGCCA 1 cut(s) 2189
MluNI TGGCCA 1 cut(s) 2189
Mly113I GGCGCC 1 cut(s) 622
MlyI GAGTC 6 cut(s) 217, 774, 1146, 1244, 1479, 2755
MmeI TCCRAC 2 cut(s) 347, 1803
Mox20I TGGCCA 1 cut(s) 2189
MroXI GAANNNNTTC 3 cut(s) 11, 935, 1068
MscI TGGCCA 1 cut(s) 2189
MslI CAYNNNNRTG 2 cut(s) 594, 2238
Msp20I TGGCCA 1 cut(s) 2189
MspA1I CMGCKG 2 cut(s) 416, 2369
MspCI CTTAAG 2 cut(s) 1325, 1810
MspI CCGG 1 cut(s) 266
MspR9I CCNGG 5 cut(s) 213, 447, 661, 751, 875
Mva1269I GAATGC 1 cut(s) 2413
MvaI CCWGG 5 cut(s) 213, 447, 661, 751, 875
MvnI CGCG 2 cut(s) 1948, 2539
MwoI GCNNNNNNNGC 4 cut(s) 1190, 1387, 1777, 2360
NarI GGCGCC 1 cut(s) 622
NdeII GATC 8 cut(s) 23, 305, 639, 913, 1579, 2242, 2694, 2734
NlaIV GGNNCC 2 cut(s) 227, 623
NmuCI GTSAC 5 cut(s) 119, 807, 1236, 1320, 2501
NspI RCATGY 2 cut(s) 97, 1760
NspV TTCGAA 1 cut(s) 1117
PaeR7I CTCGAG 1 cut(s) 919
PagI TCATGA 2 cut(s) 1035, 1455
PasI CCCWGGG 1 cut(s) 660
PciI ACATGT 1 cut(s) 93
PciSI GCTCTTC 3 cut(s) 17, 499, 1344
PctI GAATGC 1 cut(s) 2413
PdmI GAANNNNTTC 3 cut(s) 11, 935, 1068
PfeI GAWTC 6 cut(s) 743, 1039, 1105, 1826, 1847, 2513
PflMI CCANNNNNTGG 1 cut(s) 717
PfoI TCCNGGA 1 cut(s) 211
PkrI GCNGC 7 cut(s) 230, 247, 566, 804, 1958, 2365, 2368
PleI GAGTC 6 cut(s) 216, 774, 1145, 1243, 1479, 2754
PluTI GGCGCC 1 cut(s) 625
PpsI GAGTC 6 cut(s) 216, 774, 1145, 1243, 1479, 2754
PpuMI RGGWCCY 1 cut(s) 985
PscI ACATGT 1 cut(s) 93
Psp124BI GAGCTC 1 cut(s) 1997
Psp5II RGGWCCY 1 cut(s) 985
Psp6I CCWGG 5 cut(s) 211, 445, 659, 749, 873
PspGI CCWGG 5 cut(s) 211, 445, 659, 749, 873
PspN4I GGNNCC 2 cut(s) 227, 623
PspPI GGNCC 4 cut(s) 532, 720, 985, 1191
PspPPI RGGWCCY 1 cut(s) 985
PspXI VCTCGAGB 1 cut(s) 919
PstI CTGCAG 1 cut(s) 2368
PsuI RGATCY 2 cut(s) 23, 305
PvuII CAGCTG 2 cut(s) 416, 2369
RsaI GTAC 6 cut(s) 322, 1088, 1562, 2106, 2600, 2676
RsaNI GTAC 6 cut(s) 321, 1087, 1561, 2105, 2599, 2675
RseI CAYNNNNRTG 2 cut(s) 594, 2238
SacI GAGCTC 1 cut(s) 1997
SalI GTCGAC 1 cut(s) 1309
SapI GCTCTTC 3 cut(s) 17, 499, 1344
SatI GCNGC 7 cut(s) 229, 246, 565, 803, 1957, 2364, 2367
Sau3AI GATC 8 cut(s) 23, 305, 639, 913, 1579, 2242, 2694, 2734
Sau96I GGNCC 4 cut(s) 532, 720, 985, 1191
ScaI AGTACT 1 cut(s) 2676
SchI GAGTC 6 cut(s) 217, 774, 1146, 1244, 1479, 2755
ScrFI CCNGG 5 cut(s) 213, 447, 661, 751, 875
SduI GDGCHC 3 cut(s) 352, 667, 1997
SexAI ACCWGGT 1 cut(s) 873
SfaNI GCATC 5 cut(s) 397, 1577, 2062, 2209, 2454
SfcI CTRYAG 1 cut(s) 2364
SfoI GGCGCC 1 cut(s) 623
Sfr274I CTCGAG 1 cut(s) 919
SfuI TTCGAA 1 cut(s) 1117
SinI GGWCC 2 cut(s) 532, 985
SlaI CTCGAG 1 cut(s) 919
SmiMI CAYNNNNRTG 2 cut(s) 594, 2238
SmlI CTYRAG 7 cut(s) 919, 1055, 1151, 1232, 1325, 1810, 2468
SmoI CTYRAG 7 cut(s) 919, 1055, 1151, 1232, 1325, 1810, 2468
SsiI CCGC 4 cut(s) 229, 535, 564, 1948
SspDI GGCGCC 1 cut(s) 621
SstI GAGCTC 1 cut(s) 1997
StyD4I CCNGG 5 cut(s) 211, 445, 659, 749, 873
TaaI ACNGT 8 cut(s) 402, 581, 789, 936, 1278, 1883, 1907, 2533
TaqI TCGA 8 cut(s) 172, 290, 340, 920, 1117, 1310, 1689, 2776
TaqII GACCGA 1 cut(s) 1317
TatI WGTACW 5 cut(s) 320, 1560, 2104, 2598, 2674
TauI GCSGC 2 cut(s) 231, 567
TfiI GAWTC 6 cut(s) 743, 1039, 1105, 1826, 1847, 2513
TscAI CASTG 6 cut(s) 208, 1087, 1107, 1290, 1900, 1912
TseFI GTSAC 5 cut(s) 119, 807, 1236, 1320, 2501
TseI GCWGC 5 cut(s) 245, 802, 1956, 2363, 2366
Tsp45I GTSAC 5 cut(s) 119, 807, 1236, 1320, 2501
TspGWI ACGGA 4 cut(s) 51, 744, 1583, 1634
TspRI CASTG 6 cut(s) 208, 1087, 1107, 1290, 1900, 1912
Van91I CCANNNNNTGG 1 cut(s) 717
Vha464I CTTAAG 2 cut(s) 1325, 1810
VpaK11BI GGWCC 2 cut(s) 532, 985
XapI RAATTY 6 cut(s) 196, 278, 468, 1600, 2021, 2556
XceI RCATGY 2 cut(s) 97, 1760
XhoI CTCGAG 1 cut(s) 919
XmiI GTMKAC 3 cut(s) 81, 1310, 1528
XmnI GAANNNNTTC 3 cut(s) 11, 935, 1068
ZrmI AGTACT 1 cut(s) 2676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.