AT3G55630

Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
20636607 .. 20639492
2886 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G55630.6

Sequence Viewer

Length: 1413 bp
ATGGCAACTGAAGACGATGGTGAATTGTCAGCTCGTTACCAGAACACGTTGGATGCATTGTCGTCTTTGATCACAAAACGTGGCCGTTTAGCTAGTAACAACCAATCTCACCGATTCCGTTTGCTCTTTCATTATCTCAAGGTTCTTGAGCTTGAAGATGCAGTTTCACAAATGAAAATCATTCATGTGGCCGGAACTAAAGGAAAGGGATCAACATGTACATTTGCGGAGTCTATTCTTCGTTGTTACGGTCTTCGAACTGGTCTCTTCACATCTCCTCACTTAATCGATGTCCGAGAGAGATTCCGTCTTAACGGCATTGAGATAAGCCAGGAGAAATTTGTGAACTACTTTTGGTGTTGCTTTCATAAGCTCAAGGAGAAAACCAGCAATGAGGTTGATGTTGTTATACTAGAAGTTGGCTTAGGTGGGAGATTCGATGCGACTAATGTGATTCAGAAACCTGTCGTCTGTGGTATTTCTTCTCTAGGGTATGACCATATGGAGATTCTTGGATACACACTTGCTGAAATTGCTGCAGAGAAAGCCGGTATCTTCAAGAGTGGAGTTCCTGCTTTTACAGTGGCTCAACCTGATGAAGCAATGCGTGTACTCAATGAAAAAGCTTCAAAATTGGAGGTGAATCTTCAGGTGGTGGAACCGTTGGACTCAAGCCAGAGACTCGGGCTTCAAGGCGAACATCAATATCTAAACGCTGGTCTTGCTGTTGCGTTGTGCTCTACATTTCTTAAAGAGATTGGTATTGAGGACAAGAATGGTTTGGATCAGACAAACGGTTTACCCGAAAAATTCATCTCTGGATTGTCAAATGCTTATTTGATGGGACGAGCTATGATAGTGCCTGATTCAGAACTCCCTGAAGAGATTGTGTATTACCTTGATGGAGCTCATAGTCCTGAAAGCATGGAAGCTTGCGCTATATGGTTTTCAAAACAGATCAAACAAAACCAAGAAAGAAACCAGAAAAGATCAGAGCAGATACTCTTGTTCAATTGTATGTCTGTTCGTGACCCGAGTTTGCTTCTTCCGCGATTAAGGAGTAAATGCATTGATCAAGGAGTTGATTTCAAGAGAGCCGTTTTTGTGCCAAACGTATCAGTGTACAACCAAGTGGGATCTTCGACAAACGTTGGCACACGTGTCGAGTCGATGTCGTGGCAGTTCGGTCTTCAGAGGATTTGGGAGAGTTTAGCTCGAGGTGAAGCAAAATCTAATTCAAAAAGTGATTCTAAAGGCAAAGAAGAAGAGAAGAGTTTCGTTTTCTCGTCACTTCCTGTGGCTGTTGACTGGCTCCGGGACAATGCTCGCCAAAGTAAACAAGTTCGTTTTCAGGTGTTGGTAACTGGTTCATTACATTTGGTGGGTGATCTCTTGAGATTTATCAAGAAATGA

Protein Analysis

470

Amino Acids

52.6

Weight (kDa)

7.57

Isoelectric Point (pI)

41.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1051
AciI CCGC 2 cut(s) 227, 1049
AclI AACGTT 1 cut(s) 1149
AclWI GGATC 3 cut(s) 217, 792, 1144
AcoI YGGCCR 2 cut(s) 82, 189
AcsI RAATTY 2 cut(s) 338, 809
AcuI CTGAAG 4 cut(s) 30, 632, 900, 1175
AcvI CACGTG 1 cut(s) 1160
AfaI GTAC 3 cut(s) 220, 612, 1124
AflIII ACRYGT 4 cut(s) 45, 215, 1157, 1159
AgsI TTSAA 8 cut(s) 155, 559, 630, 692, 951, 1012, 1090, 1239
AjnI CCWGG 1 cut(s) 330
AluBI AGCT 9 cut(s) 32, 92, 151, 373, 626, 851, 908, 932, 1214
AluI AGCT 9 cut(s) 32, 92, 151, 373, 626, 851, 908, 932, 1214
Alw21I GWGCWC 2 cut(s) 740, 910
Alw26I GTCTC 2 cut(s) 269, 673
AlwI GGATC 3 cut(s) 217, 792, 1144
Ama87I CYCGRG 3 cut(s) 683, 1033, 1215
AoxI GGCC 2 cut(s) 82, 189
ApeKI GCWGC 1 cut(s) 536
ApoI RAATTY 2 cut(s) 338, 809
Asp700I GAANNNNTTC 1 cut(s) 1274
AspLEI GCGC 1 cut(s) 938
AsuC2I CCSGG 1 cut(s) 1316
AsuHPI GGTGA 5 cut(s) 32, 101, 652, 1232, 1397
AsuII TTCGAA 1 cut(s) 256
AvaI CYCGRG 3 cut(s) 683, 1033, 1215
BaeI ACNNNNGTAYC 2 cut(s) 992, 1025
BanII GRGCYC 1 cut(s) 910
BbrPI CACGTG 1 cut(s) 1160
BbsI GAAGAC 3 cut(s) 18, 245, 1181
Bbv12I GWGCWC 2 cut(s) 740, 910
BbvI GCAGC 1 cut(s) 523
BccI CCATC 3 cut(s) 11, 835, 896
BceAI ACGGC 3 cut(s) 69, 331, 1082
BcgI CGANNNNNNTGC 2 cut(s) 1144, 1178
BciT130I CCWGG 1 cut(s) 332
BciVI GTATCC 1 cut(s) 509
BclI TGATCA 2 cut(s) 69, 1072
BcnI CCSGG 1 cut(s) 1316
BcoDI GTCTC 2 cut(s) 269, 673
BfaI CTAG 3 cut(s) 93, 413, 488
BfmI CTRYAG 1 cut(s) 537
BfuI GTATCC 1 cut(s) 509
BisI GCNGC 1 cut(s) 537
BlsI GCNGC 1 cut(s) 538
Bme1390I CCNGG 2 cut(s) 332, 1316
BmeT110I CYCGRG 3 cut(s) 683, 1033, 1215
BmiI GGNNCC 2 cut(s) 660, 1313
BmrFI CCNGG 2 cut(s) 332, 1316
BmsI GCATC 3 cut(s) 43, 148, 430
BpiI GAAGAC 3 cut(s) 18, 245, 1181
BplI GAGNNNNNCTC 2 cut(s) 1198, 1230
Bpu10I CCTNAGC 1 cut(s) 424
Bpu14I TTCGAA 1 cut(s) 256
BpuEI CTTGAG 4 cut(s) 122, 167, 359, 655
BpuMI CCSGG 1 cut(s) 1316
Bsa29I ATCGAT 1 cut(s) 288
BsaAI YACGTR 1 cut(s) 1160
BsaI GGTCTC 1 cut(s) 269
Bse118I RCCGGY 1 cut(s) 548
Bse1I ACTGG 3 cut(s) 265, 1313, 1369
Bse3DI GCAATG 2 cut(s) 397, 609
BseBI CCWGG 1 cut(s) 332
BseCI ATCGAT 1 cut(s) 288
BseGI GGATG 1 cut(s) 58
BseMI GCAATG 2 cut(s) 397, 609
BseNI ACTGG 3 cut(s) 265, 1313, 1369
BseRI GAGGAG 1 cut(s) 267
BseXI GCAGC 1 cut(s) 523
Bsh1236I CGCG 1 cut(s) 1051
BshFI GGCC 2 cut(s) 84, 191
BshVI ATCGAT 1 cut(s) 288
BsiHKAI GWGCWC 2 cut(s) 740, 910
BsiHKCI CYCGRG 3 cut(s) 683, 1033, 1215
BsiSI CCGG 3 cut(s) 192, 549, 1315
BslFI GGGAC 2 cut(s) 858, 1331
BsmAI GTCTC 2 cut(s) 269, 673
BsmFI GGGAC 2 cut(s) 858, 1331
BsnI GGCC 2 cut(s) 84, 191
Bso31I GGTCTC 1 cut(s) 269
BsoBI CYCGRG 3 cut(s) 683, 1033, 1215
Bsp119I TTCGAA 1 cut(s) 256
Bsp1286I GDGCHC 2 cut(s) 740, 910
Bsp1407I TGTACA 2 cut(s) 218, 1122
Bsp143I GATC 8 cut(s) 69, 209, 784, 957, 989, 1072, 1136, 1387
BspACI CCGC 2 cut(s) 227, 1049
BspANI GGCC 2 cut(s) 84, 191
BspDI ATCGAT 1 cut(s) 288
BspFNI CGCG 1 cut(s) 1051
BspLI GGNNCC 2 cut(s) 660, 1313
BspMAI CTGCAG 1 cut(s) 541
BspPI GGATC 3 cut(s) 217, 792, 1144
BspT104I TTCGAA 1 cut(s) 256
BspTNI GGTCTC 1 cut(s) 269
BsrDI GCAATG 2 cut(s) 397, 609
BsrFI RCCGGY 1 cut(s) 548
BsrGI TGTACA 2 cut(s) 218, 1122
BsrI ACTGG 3 cut(s) 265, 1313, 1369
BssAI RCCGGY 1 cut(s) 548
BssMI GATC 8 cut(s) 69, 209, 784, 957, 989, 1072, 1136, 1387
Bst2UI CCWGG 1 cut(s) 332
Bst4CI ACNGT 4 cut(s) 251, 583, 663, 797
Bst6I CTCTTC 4 cut(s) 272, 876, 1260, 1265
BstAUI TGTACA 2 cut(s) 218, 1122
BstBAI YACGTR 1 cut(s) 1160
BstBI TTCGAA 1 cut(s) 256
BstC8I GCNNGC 2 cut(s) 934, 1327
BstDEI CTNAG 1 cut(s) 424
BstF5I GGATG 1 cut(s) 58
BstFNI CGCG 1 cut(s) 1051
BstHHI GCGC 1 cut(s) 938
BstKTI GATC 8 cut(s) 72, 212, 787, 960, 992, 1075, 1139, 1390
BstMAI GTCTC 2 cut(s) 269, 673
BstMBI GATC 8 cut(s) 69, 209, 784, 957, 989, 1072, 1136, 1387
BstMWI GCNNNNNNNGC 4 cut(s) 533, 545, 722, 1048
BstNI CCWGG 1 cut(s) 332
BstNSI RCATGY 1 cut(s) 219
BstSCI CCNGG 2 cut(s) 330, 1314
BstSFI CTRYAG 1 cut(s) 537
BstUI CGCG 1 cut(s) 1051
BstV1I GCAGC 1 cut(s) 523
BstV2I GAAGAC 3 cut(s) 18, 245, 1181
BstX2I RGATCY 1 cut(s) 1136
BstYI RGATCY 1 cut(s) 1136
Bsu15I ATCGAT 1 cut(s) 288
BsuI GTATCC 1 cut(s) 509
BsuRI GGCC 2 cut(s) 84, 191
BsuTUI ATCGAT 1 cut(s) 288
BtsCI GGATG 1 cut(s) 58
BtsIMutI CAGTG 2 cut(s) 588, 1125
Cac8I GCNNGC 2 cut(s) 934, 1327
CfoI GCGC 1 cut(s) 938
Cfr10I RCCGGY 1 cut(s) 548
ClaI ATCGAT 1 cut(s) 288
Csp6I GTAC 3 cut(s) 219, 611, 1123
CviAII CATG 3 cut(s) 185, 216, 925
CviQI GTAC 3 cut(s) 219, 611, 1123
DdeI CTNAG 1 cut(s) 424
DpnI GATC 8 cut(s) 71, 211, 786, 959, 991, 1074, 1138, 1389
DpnII GATC 8 cut(s) 69, 209, 784, 957, 989, 1072, 1136, 1387
EaeI YGGCCR 2 cut(s) 82, 189
Eam1104I CTCTTC 4 cut(s) 272, 876, 1260, 1265
EarI CTCTTC 4 cut(s) 272, 876, 1260, 1265
Ecl136II GAGCTC 1 cut(s) 908
Eco24I GRGCYC 1 cut(s) 910
Eco31I GGTCTC 1 cut(s) 269
Eco53kI GAGCTC 1 cut(s) 908
Eco57I CTGAAG 4 cut(s) 30, 632, 900, 1175
Eco72I CACGTG 1 cut(s) 1160
Eco88I CYCGRG 3 cut(s) 683, 1033, 1215
EcoICRI GAGCTC 1 cut(s) 908
EcoRII CCWGG 1 cut(s) 330
EcoT22I ATGCAT 2 cut(s) 58, 1070
EcoT38I GRGCYC 1 cut(s) 910
FaeI CATG 3 cut(s) 188, 219, 928
FaqI GGGAC 2 cut(s) 858, 1331
FatI CATG 3 cut(s) 184, 215, 924
FauNDI CATATG 1 cut(s) 501
FbaI TGATCA 2 cut(s) 69, 1072
Fnu4HI GCNGC 1 cut(s) 537
FokI GGATG 1 cut(s) 65
FriOI GRGCYC 1 cut(s) 910
Fsp4HI GCNGC 1 cut(s) 537
FspBI CTAG 3 cut(s) 93, 413, 488
GlaI GCGC 1 cut(s) 937
GluI GCNGC 1 cut(s) 537
HaeIII GGCC 2 cut(s) 84, 191
HapII CCGG 3 cut(s) 192, 549, 1315
HhaI GCGC 1 cut(s) 938
Hin1II CATG 3 cut(s) 188, 219, 928
Hin6I GCGC 1 cut(s) 936
HinP1I GCGC 1 cut(s) 936
HincII GTYRAC 1 cut(s) 1306
HindII GTYRAC 1 cut(s) 1306
HindIII AAGCTT 2 cut(s) 624, 930
HpaII CCGG 3 cut(s) 192, 549, 1315
HphI GGTGA 5 cut(s) 32, 101, 652, 1232, 1397
Hpy166II GTNNAC 6 cut(s) 346, 611, 800, 1123, 1306, 1337
Hpy188I TCNGA 6 cut(s) 296, 459, 789, 871, 994, 1194
Hpy188III TCNNGA 8 cut(s) 146, 559, 819, 917, 1028, 1090, 1393, 1405
Hpy8I GTNNAC 6 cut(s) 346, 611, 800, 1123, 1306, 1337
HpyCH4III ACNGT 4 cut(s) 251, 583, 663, 797
HpyCH4IV ACGT 5 cut(s) 47, 79, 1113, 1149, 1159
HpyCH4V TGCA 4 cut(s) 56, 161, 539, 1068
HpyF10VI GCNNNNNNNGC 4 cut(s) 533, 545, 722, 1048
HpyF3I CTNAG 1 cut(s) 424
HpySE526I ACGT 5 cut(s) 47, 79, 1113, 1149, 1159
Hsp92II CATG 3 cut(s) 188, 219, 928
HspAI GCGC 1 cut(s) 936
Ksp22I TGATCA 2 cut(s) 69, 1072
Kzo9I GATC 8 cut(s) 69, 209, 784, 957, 989, 1072, 1136, 1387
LmnI GCTCC 2 cut(s) 905, 1317
Lsp1109I GCAGC 1 cut(s) 523
LweI GCATC 3 cut(s) 43, 148, 430
MaeI CTAG 3 cut(s) 93, 413, 488
MaeII ACGT 5 cut(s) 47, 79, 1113, 1149, 1159
MaeIII GTNAC 6 cut(s) 35, 95, 245, 1028, 1287, 1360
MalI GATC 8 cut(s) 71, 211, 786, 959, 991, 1074, 1138, 1389
MboI GATC 8 cut(s) 69, 209, 784, 957, 989, 1072, 1136, 1387
MfeI CAATTG 1 cut(s) 1012
MflI RGATCY 1 cut(s) 1136
MhlI GDGCHC 2 cut(s) 740, 910
MluCI AATT 7 cut(s) 23, 338, 531, 632, 809, 1012, 1234
MlyI GAGTC 4 cut(s) 239, 662, 675, 1175
MmeI TCCRAC 2 cut(s) 30, 645
MnlI CCTC 6 cut(s) 288, 388, 631, 760, 1188, 1211
Mph1103I ATGCAT 2 cut(s) 58, 1070
MroXI GAANNNNTTC 1 cut(s) 1274
MseI TTAA 4 cut(s) 284, 312, 750, 1055
MslI CAYNNNNRTG 1 cut(s) 185
MspI CCGG 3 cut(s) 192, 549, 1315
MspR9I CCNGG 2 cut(s) 332, 1316
MunI CAATTG 1 cut(s) 1012
MvaI CCWGG 1 cut(s) 332
MvnI CGCG 1 cut(s) 1051
MwoI GCNNNNNNNGC 4 cut(s) 533, 545, 722, 1048
NciI CCSGG 1 cut(s) 1316
NdeI CATATG 1 cut(s) 501
NdeII GATC 8 cut(s) 69, 209, 784, 957, 989, 1072, 1136, 1387
NlaIII CATG 3 cut(s) 188, 219, 928
NlaIV GGNNCC 2 cut(s) 660, 1313
NmuCI GTSAC 2 cut(s) 1028, 1287
NsiI ATGCAT 2 cut(s) 58, 1070
NspI RCATGY 1 cut(s) 219
NspV TTCGAA 1 cut(s) 256
PaeR7I CTCGAG 1 cut(s) 1215
PciI ACATGT 1 cut(s) 215
PcsI WCGNNNNNNNCGW 1 cut(s) 801
PdmI GAANNNNTTC 1 cut(s) 1274
PfeI GAWTC 8 cut(s) 114, 303, 435, 454, 508, 643, 866, 1247
PfoI TCCNGGA 1 cut(s) 1314
PkrI GCNGC 1 cut(s) 538
PleI GAGTC 4 cut(s) 238, 662, 675, 1174
PmaCI CACGTG 1 cut(s) 1160
PmlI CACGTG 1 cut(s) 1160
PpsI GAGTC 4 cut(s) 238, 662, 675, 1174
Ppu21I YACGTR 1 cut(s) 1160
PscI ACATGT 1 cut(s) 215
Psp124BI GAGCTC 1 cut(s) 910
Psp1406I AACGTT 1 cut(s) 1149
Psp6I CCWGG 1 cut(s) 330
PspCI CACGTG 1 cut(s) 1160
PspGI CCWGG 1 cut(s) 330
PspN4I GGNNCC 2 cut(s) 660, 1313
PspXI VCTCGAGB 1 cut(s) 1215
PstI CTGCAG 1 cut(s) 541
PsuI RGATCY 1 cut(s) 1136
RsaI GTAC 3 cut(s) 220, 612, 1124
RsaNI GTAC 3 cut(s) 219, 611, 1123
RseI CAYNNNNRTG 1 cut(s) 185
SacI GAGCTC 1 cut(s) 910
SaqAI TTAA 4 cut(s) 284, 312, 750, 1055
SatI GCNGC 1 cut(s) 537
Sau3AI GATC 8 cut(s) 69, 209, 784, 957, 989, 1072, 1136, 1387
SchI GAGTC 4 cut(s) 239, 662, 675, 1175
ScrFI CCNGG 2 cut(s) 332, 1316
SduI GDGCHC 2 cut(s) 740, 910
SfaNI GCATC 3 cut(s) 43, 148, 430
SfcI CTRYAG 1 cut(s) 537
Sfr274I CTCGAG 1 cut(s) 1215
SfuI TTCGAA 1 cut(s) 256
SlaI CTCGAG 1 cut(s) 1215
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 6 cut(s) 137, 146, 374, 670, 1215, 1393
SmoI CTYRAG 6 cut(s) 137, 146, 374, 670, 1215, 1393
Sse9I AATT 7 cut(s) 23, 338, 531, 632, 809, 1012, 1234
SsiI CCGC 2 cut(s) 227, 1049
SspMI CTAG 3 cut(s) 93, 413, 488
SstI GAGCTC 1 cut(s) 910
StyD4I CCNGG 2 cut(s) 330, 1314
TaaI ACNGT 4 cut(s) 251, 583, 663, 797
TaiI ACGT 5 cut(s) 50, 82, 1116, 1152, 1162
TaqI TCGA 7 cut(s) 256, 288, 438, 1142, 1164, 1169, 1216
TaqII GACCGA 1 cut(s) 1175
TasI AATT 7 cut(s) 23, 338, 531, 632, 809, 1012, 1234
TatI WGTACW 3 cut(s) 218, 610, 1122
TfiI GAWTC 8 cut(s) 114, 303, 435, 454, 508, 643, 866, 1247
Tru1I TTAA 4 cut(s) 284, 312, 750, 1055
Tru9I TTAA 4 cut(s) 284, 312, 750, 1055
TscAI CASTG 2 cut(s) 588, 1125
TseFI GTSAC 2 cut(s) 1028, 1287
TseI GCWGC 1 cut(s) 536
Tsp45I GTSAC 2 cut(s) 1028, 1287
TspDTI ATGAA 8 cut(s) 119, 173, 188, 356, 612, 633, 802, 1359
TspGWI ACGGA 2 cut(s) 107, 296
TspRI CASTG 2 cut(s) 588, 1125
XapI RAATTY 2 cut(s) 338, 809
XceI RCATGY 1 cut(s) 219
XhoI CTCGAG 1 cut(s) 1215
XmnI GAANNNNTTC 1 cut(s) 1274
XspI CTAG 3 cut(s) 93, 413, 488
Zsp2I ATGCAT 2 cut(s) 58, 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.