FvH4_7g23490

Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
18302289 .. 18307888
5600 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g23490.t3

Sequence Viewer

Length: 1608 bp
ATGGTTCAAGACGGCGACGGCTCTTCGGCTCCGTCGCAGACTCCATACGAGGCGGCATTGGAGGCGCTCTCGTCGCTGATCACGAAACGCAGCCGCGCCGATACGAGCAACAAAGGCGGCGGCTTCGATGTGCTCTTCGACTATCTCAGAATTCTGGAATTGGAGGAGCCGATTGCGCAGATGAAGATCATTCATGTGGCTGGCACCAAAGGAAAGGGATCCACATGCACCTTCTCTGAGTCAATACTACGGCATTGTGGCTTCCGCACTGGACTTTTCACATCTCCTCATCTGATTGATGTGCGAGAAAGATTTCGTTTGGATGGAGTGGACATCAGCGAAGAGAAATTCTTGGAGTATTTCTGGTGGTCTTTTAATAGACTAAAGGAAAAAGCTACTGATGATATACCAATGCCTACCTACTTTCGCTTCCTTGCCTTACTTGCTTTCAAGATATTTGCAGGGGAGAAGGTAGATGTTGCTATTTTGGAAGTCGGTTTAGGTGGAAAGTTTGACGCAACAAATGTGGTTCAGGCACCTGTTGTTTGTGGTATAGCATCCCTTGGATATGATCATATGGAGATTCTTGGATATACCCTGGGAGCAATTGCTGGGGAGAAGGCTGGAATCTTCAAGCAAGGAGTTCCTGCTTTCACTGTGCCTCAACCTGATGAAGCAATGCGGGTTCTTGAAGAGAAAGCTTCTCTGTTGAATGTACCTCTTCAAACAGTGCAACCAGTGAATGCTAATTTGCTGAATGGCTTAAAACTTGGGCTTGAAGGTGAGCACCAATATGTTAATGCTGGCCTTGCTGTTGCACTATGCTCTACATGGCTTCAAAGGACTGGTCATCTTGGTATTACTCACCAGGGAAACACAACCTCTCTGCCGGAGCAGTTTATAAAAGGACTAACGGCTACTGTCAGTTTACAAGGCCGAGCTCAAATTGTTCCAGATGACTATACGAACAATGACAGCCCAGGAGATCTGACATTCTATTTAGATGGTGCCCATAGCCCCGAAAGCATGGAGATATGTGCAAGATGGTTTTCTCTTTCAACTAAAGAGAATTCTCAGGAAAAGGTTCCGGATTCATCTAGGTCACATGATTTTGTACAAAGCCATGCTGATGTTAAAGCCAAGAAGAACTCACAGATACTGCTGTTTAATTGTATGTCAGTGAGGGATCCTCAATTGCTTCTTCCGAACCTGATGAAAACATGTGCTAGTCATGGTGTCTACTTCAAGAAGGCGCTATTTGTACCAAACACATCAGTGTATCACAAGGTTGGTTCACATTCCTTACCTCCCACTGATCCTCAAGTTGATTTGTCGTGGCAATTCTCTCTTCAGAGAGTATGGGAAAATCTAATGGGAAATAAAGGAGTTGATGATAAGATCCCAGATACTCTTTCTGAAGAATTAAGAGATGATATGGAAATGCCTGTCAAAAATTGTGAAAATAGTGCTGTTTTTTCCTCACTCCCATCAGCTATAAAGTGGCTCAGGGACAGTGTCCGGCATAATCAATCTACTCGATTTCAGGTCCTTGTAACTGGTTCGCTCCATCTTGTTGGCGATGTATTGAGATTAGTCAAGAAGGCATAG

Protein Analysis

536

Amino Acids

59.09

Weight (kDa)

5.95

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 902
Acc16I TGCGCA 1 cut(s) 177
AccB1I GGYRCC 3 cut(s) 203, 535, 1007
AccI GTMKAC 1 cut(s) 1239
AccII CGCG 1 cut(s) 96
AccIII TCCGGA 1 cut(s) 1087
AciI CCGC 6 cut(s) 53, 94, 117, 120, 265, 682
AclWI GGATC 6 cut(s) 213, 226, 1181, 1194, 1310, 1393
AcsI RAATTY 3 cut(s) 150, 347, 1069
AcuI CTGAAG 2 cut(s) 1334, 1437
AfaI GTAC 3 cut(s) 717, 1116, 1263
AflIII ACRYGT 1 cut(s) 1220
AjnI CCWGG 3 cut(s) 597, 867, 979
AleI CACNNNNGTG 1 cut(s) 1274
AluBI AGCT 4 cut(s) 395, 701, 941, 1493
AluI AGCT 4 cut(s) 395, 701, 941, 1493
Alw21I GWGCWC 3 cut(s) 135, 789, 943
AlwI GGATC 6 cut(s) 213, 226, 1181, 1194, 1310, 1393
AlwNI CAGNNNCTG 1 cut(s) 1159
Aor13HI TCCGGA 1 cut(s) 1087
AoxI GGCC 2 cut(s) 805, 934
ApeKI GCWGC 1 cut(s) 90
ApoI RAATTY 3 cut(s) 150, 347, 1069
ArsI GACNNNNNNTTYG 2 cut(s) 832, 864
Asp700I GAANNNNTTC 2 cut(s) 312, 1083
AspLEI GCGC 4 cut(s) 67, 98, 178, 1255
AspS9I GGNCC 1 cut(s) 1546
AsuHPI GGTGA 2 cut(s) 794, 857
AvaII GGWCC 1 cut(s) 1546
BaeGI GKGCMC 1 cut(s) 1012
BaeI ACNNNNGTAYC 2 cut(s) 1148, 1181
BamHI GGATCC 2 cut(s) 218, 1186
BanI GGYRCC 3 cut(s) 203, 535, 1007
BanII GRGCYC 1 cut(s) 943
Bbv12I GWGCWC 3 cut(s) 135, 789, 943
BbvI GCAGC 1 cut(s) 102
BccI CCATC 5 cut(s) 317, 998, 1038, 1495, 1575
BceAI ACGGC 4 cut(s) 28, 34, 266, 930
BciT130I CCWGG 3 cut(s) 599, 869, 981
BclI TGATCA 2 cut(s) 78, 571
BfaI CTAG 2 cut(s) 1098, 1227
BfoI RGCGCY 2 cut(s) 68, 1256
BglII AGATCT 1 cut(s) 985
BisI GCNGC 5 cut(s) 54, 91, 94, 118, 121
BlsI GCNGC 5 cut(s) 55, 92, 95, 119, 122
Bme1390I CCNGG 3 cut(s) 599, 869, 981
Bme18I GGWCC 1 cut(s) 1546
BmgT120I GGNCC 1 cut(s) 1546
BmiI GGNNCC 8 cut(s) 30, 168, 205, 220, 537, 1009, 1086, 1188
BmrFI CCNGG 3 cut(s) 599, 869, 981
BmsI GCATC 1 cut(s) 566
BplI GAGNNNNNCTC 4 cut(s) 53, 85, 1174, 1206
Bpu10I CCTNAGC 1 cut(s) 1505
BpuEI CTTGAG 1 cut(s) 1305
BsaBI GATNNNNATC 1 cut(s) 185
BsaJI CCNNGG 5 cut(s) 562, 597, 598, 868, 979
BsaWI WCCGGW 1 cut(s) 1087
Bse1I ACTGG 4 cut(s) 274, 737, 850, 1561
Bse3DI GCAATG 1 cut(s) 684
Bse8I GATNNNNATC 1 cut(s) 185
BseAI TCCGGA 1 cut(s) 1087
BseBI CCWGG 3 cut(s) 599, 869, 981
BseDI CCNNGG 5 cut(s) 562, 597, 598, 868, 979
BseGI GGATG 2 cut(s) 328, 557
BseJI GATNNNNATC 1 cut(s) 185
BseMI GCAATG 1 cut(s) 684
BseMII CTCAG 4 cut(s) 160, 228, 1088, 1519
BseNI ACTGG 4 cut(s) 274, 737, 850, 1561
BseRI GAGGAG 2 cut(s) 179, 276
BseSI GKGCMC 1 cut(s) 1012
BseXI GCAGC 1 cut(s) 102
BseYI CCCAGC 1 cut(s) 611
Bsh1236I CGCG 1 cut(s) 96
BshFI GGCC 2 cut(s) 807, 936
BshNI GGYRCC 3 cut(s) 203, 535, 1007
BsiHKAI GWGCWC 3 cut(s) 135, 789, 943
BsiSI CCGG 3 cut(s) 890, 1088, 1519
BslFI GGGAC 1 cut(s) 1523
BsmFI GGGAC 1 cut(s) 1523
BsmI GAATGC 1 cut(s) 748
BsnI GGCC 2 cut(s) 807, 936
Bsp1286I GDGCHC 4 cut(s) 135, 789, 943, 1012
Bsp13I TCCGGA 1 cut(s) 1087
Bsp1407I TGTACA 1 cut(s) 1114
Bsp143I GATC 8 cut(s) 78, 186, 218, 571, 985, 1186, 1315, 1398
BspACI CCGC 6 cut(s) 53, 94, 117, 120, 265, 682
BspANI GGCC 2 cut(s) 807, 936
BspCNI CTCAG 4 cut(s) 159, 229, 1087, 1518
BspEI TCCGGA 1 cut(s) 1087
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 8 cut(s) 30, 168, 205, 220, 537, 1009, 1086, 1188
BspPI GGATC 6 cut(s) 213, 226, 1181, 1194, 1310, 1393
BspQI GCTCTTC 2 cut(s) 28, 140
BspT107I GGYRCC 3 cut(s) 203, 535, 1007
BsrDI GCAATG 1 cut(s) 684
BsrGI TGTACA 1 cut(s) 1114
BsrI ACTGG 4 cut(s) 274, 737, 850, 1561
BssECI CCNNGG 5 cut(s) 562, 597, 598, 868, 979
BssMI GATC 8 cut(s) 78, 186, 218, 571, 985, 1186, 1315, 1398
BssT1I CCWWGG 1 cut(s) 562
Bst2UI CCWGG 3 cut(s) 599, 869, 981
Bst4CI ACNGT 4 cut(s) 658, 730, 922, 1514
Bst6I CTCTTC 6 cut(s) 28, 140, 336, 687, 726, 1353
BstAUI TGTACA 1 cut(s) 1114
BstC8I GCNNGC 2 cut(s) 202, 805
BstDEI CTNAG 4 cut(s) 146, 237, 1074, 1505
BstF5I GGATG 2 cut(s) 328, 557
BstFNI CGCG 1 cut(s) 96
BstH2I RGCGCY 2 cut(s) 68, 1256
BstHHI GCGC 4 cut(s) 67, 98, 178, 1255
BstKTI GATC 8 cut(s) 81, 189, 221, 574, 988, 1189, 1318, 1401
BstMBI GATC 8 cut(s) 78, 186, 218, 571, 985, 1186, 1315, 1398
BstMWI GCNNNNNNNGC 7 cut(s) 62, 73, 114, 175, 443, 809, 1023
BstNI CCWGG 3 cut(s) 599, 869, 981
BstNSI RCATGY 2 cut(s) 228, 1224
BstSCI CCNGG 3 cut(s) 597, 867, 979
BstSLI GKGCMC 1 cut(s) 1012
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 1 cut(s) 102
BstX2I RGATCY 4 cut(s) 218, 985, 1186, 1398
BstXI CCANNNNNNTGG 1 cut(s) 1574
BstYI RGATCY 4 cut(s) 218, 985, 1186, 1398
BsuRI GGCC 2 cut(s) 807, 936
BtgZI GCGATG 1 cut(s) 1593
BtsCI GGATG 2 cut(s) 328, 557
BtsIMutI CAGTG 8 cut(s) 267, 654, 735, 744, 1185, 1281, 1311, 1519
Cac8I GCNNGC 2 cut(s) 202, 805
CaiI CAGNNNCTG 1 cut(s) 1159
CfoI GCGC 4 cut(s) 67, 98, 178, 1255
Cfr13I GGNCC 1 cut(s) 1546
CseI GACGC 1 cut(s) 524
Csp6I GTAC 3 cut(s) 716, 1115, 1262
CspCI CAANNNNNGTGG 2 cut(s) 507, 542
CviAII CATG 8 cut(s) 194, 225, 831, 1027, 1106, 1124, 1221, 1232
CviQI GTAC 3 cut(s) 716, 1115, 1262
DdeI CTNAG 4 cut(s) 146, 237, 1074, 1505
DpnI GATC 8 cut(s) 80, 188, 220, 573, 987, 1188, 1317, 1400
DpnII GATC 8 cut(s) 78, 186, 218, 571, 985, 1186, 1315, 1398
Eam1104I CTCTTC 6 cut(s) 28, 140, 336, 687, 726, 1353
EarI CTCTTC 6 cut(s) 28, 140, 336, 687, 726, 1353
Ecl136II GAGCTC 1 cut(s) 941
Eco130I CCWWGG 1 cut(s) 562
Eco24I GRGCYC 1 cut(s) 943
Eco47I GGWCC 1 cut(s) 1546
Eco53kI GAGCTC 1 cut(s) 941
Eco57I CTGAAG 2 cut(s) 1334, 1437
EcoICRI GAGCTC 1 cut(s) 941
EcoO109I RGGNCCY 1 cut(s) 1546
EcoRI GAATTC 2 cut(s) 150, 1069
EcoRII CCWGG 3 cut(s) 597, 867, 979
EcoT14I CCWWGG 1 cut(s) 562
EcoT38I GRGCYC 1 cut(s) 943
ErhI CCWWGG 1 cut(s) 562
FaeI CATG 8 cut(s) 197, 228, 834, 1030, 1109, 1127, 1224, 1235
FaqI GGGAC 1 cut(s) 1523
FatI CATG 8 cut(s) 193, 224, 830, 1026, 1105, 1123, 1220, 1231
FauI CCCGC 1 cut(s) 675
FauNDI CATATG 1 cut(s) 576
FbaI TGATCA 2 cut(s) 78, 571
FblI GTMKAC 1 cut(s) 1239
Fnu4HI GCNGC 5 cut(s) 54, 91, 94, 118, 121
FokI GGATG 2 cut(s) 335, 544
FriOI GRGCYC 1 cut(s) 943
Fsp4HI GCNGC 5 cut(s) 54, 91, 94, 118, 121
FspBI CTAG 2 cut(s) 1098, 1227
FspI TGCGCA 1 cut(s) 177
GlaI GCGC 4 cut(s) 66, 97, 177, 1254
GluI GCNGC 5 cut(s) 54, 91, 94, 118, 121
GsaI CCCAGC 1 cut(s) 615
HaeII RGCGCY 2 cut(s) 68, 1256
HaeIII GGCC 2 cut(s) 807, 936
HapII CCGG 3 cut(s) 890, 1088, 1519
HgaI GACGC 1 cut(s) 524
HhaI GCGC 4 cut(s) 67, 98, 178, 1255
Hin1II CATG 8 cut(s) 197, 228, 834, 1030, 1109, 1127, 1224, 1235
Hin6I GCGC 4 cut(s) 65, 96, 176, 1253
HinP1I GCGC 4 cut(s) 65, 96, 176, 1253
HindIII AAGCTT 1 cut(s) 699
HinfI GANTC 5 cut(s) 40, 239, 583, 627, 1091
HpaII CCGG 3 cut(s) 890, 1088, 1519
HphI GGTGA 2 cut(s) 794, 857
Hpy166II GTNNAC 4 cut(s) 331, 929, 1240, 1295
Hpy188I TCNGA 7 cut(s) 149, 238, 294, 990, 1206, 1353, 1417
Hpy8I GTNNAC 4 cut(s) 331, 929, 1240, 1295
Hpy99I CGWCG 3 cut(s) 20, 37, 76
HpyAV CCTTC 6 cut(s) 241, 463, 613, 773, 1243, 1594
HpyCH4III ACNGT 4 cut(s) 658, 730, 922, 1514
HpyCH4V TGCA 5 cut(s) 228, 461, 733, 818, 1040
HpyF10VI GCNNNNNNNGC 7 cut(s) 62, 73, 114, 175, 443, 809, 1023
HpyF3I CTNAG 4 cut(s) 146, 237, 1074, 1505
Hsp92II CATG 8 cut(s) 197, 228, 834, 1030, 1109, 1127, 1224, 1235
HspAI GCGC 4 cut(s) 65, 96, 176, 1253
Kpn2I TCCGGA 1 cut(s) 1087
Ksp22I TGATCA 2 cut(s) 78, 571
Kzo9I GATC 8 cut(s) 78, 186, 218, 571, 985, 1186, 1315, 1398
LguI GCTCTTC 2 cut(s) 28, 140
LmnI GCTCC 5 cut(s) 34, 166, 602, 892, 1569
Lsp1109I GCAGC 1 cut(s) 102
LweI GCATC 1 cut(s) 566
MaeI CTAG 2 cut(s) 1098, 1227
MaeIII GTNAC 2 cut(s) 1101, 1552
MalI GATC 8 cut(s) 80, 188, 220, 573, 987, 1188, 1317, 1400
MboI GATC 8 cut(s) 78, 186, 218, 571, 985, 1186, 1315, 1398
MfeI CAATTG 2 cut(s) 606, 1193
MflI RGATCY 4 cut(s) 218, 985, 1186, 1398
MhlI GDGCHC 4 cut(s) 135, 789, 943, 1012
MlyI GAGTC 2 cut(s) 34, 248
MroI TCCGGA 1 cut(s) 1087
MroXI GAANNNNTTC 2 cut(s) 312, 1083
MseI TTAA 6 cut(s) 375, 764, 798, 1134, 1167, 1424
MslI CAYNNNNRTG 4 cut(s) 194, 792, 1128, 1274
MspI CCGG 3 cut(s) 890, 1088, 1519
MspR9I CCNGG 3 cut(s) 599, 869, 981
MunI CAATTG 2 cut(s) 606, 1193
Mva1269I GAATGC 1 cut(s) 748
MvaI CCWGG 3 cut(s) 599, 869, 981
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 7 cut(s) 62, 73, 114, 175, 443, 809, 1023
NdeI CATATG 1 cut(s) 576
NdeII GATC 8 cut(s) 78, 186, 218, 571, 985, 1186, 1315, 1398
NlaIII CATG 8 cut(s) 197, 228, 834, 1030, 1109, 1127, 1224, 1235
NlaIV GGNNCC 8 cut(s) 30, 168, 205, 220, 537, 1009, 1086, 1188
NmeAIII GCCGAG 1 cut(s) 962
NmuCI GTSAC 1 cut(s) 1101
NsbI TGCGCA 1 cut(s) 177
NspI RCATGY 2 cut(s) 228, 1224
OliI CACNNNNGTG 1 cut(s) 1274
PasI CCCWGGG 1 cut(s) 598
PciI ACATGT 1 cut(s) 1220
PciSI GCTCTTC 2 cut(s) 28, 140
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PctI GAATGC 1 cut(s) 748
PdmI GAANNNNTTC 2 cut(s) 312, 1083
PfeI GAWTC 3 cut(s) 583, 627, 1091
PflFI GACNNNGTC 1 cut(s) 1514
PkrI GCNGC 5 cut(s) 55, 92, 95, 119, 122
PleI GAGTC 2 cut(s) 34, 247
PpsI GAGTC 2 cut(s) 34, 247
PpuMI RGGWCCY 1 cut(s) 1546
PscI ACATGT 1 cut(s) 1220
PsiI TTATAA 1 cut(s) 902
Psp124BI GAGCTC 1 cut(s) 943
Psp5II RGGWCCY 1 cut(s) 1546
Psp6I CCWGG 3 cut(s) 597, 867, 979
PspFI CCCAGC 1 cut(s) 611
PspGI CCWGG 3 cut(s) 597, 867, 979
PspN4I GGNNCC 8 cut(s) 30, 168, 205, 220, 537, 1009, 1086, 1188
PspPI GGNCC 1 cut(s) 1546
PspPPI RGGWCCY 1 cut(s) 1546
PstNI CAGNNNCTG 1 cut(s) 1159
PsuI RGATCY 4 cut(s) 218, 985, 1186, 1398
PsyI GACNNNGTC 1 cut(s) 1514
RsaI GTAC 3 cut(s) 717, 1116, 1263
RsaNI GTAC 3 cut(s) 716, 1115, 1262
RseI CAYNNNNRTG 4 cut(s) 194, 792, 1128, 1274
SacI GAGCTC 1 cut(s) 943
SapI GCTCTTC 2 cut(s) 28, 140
SaqAI TTAA 6 cut(s) 375, 764, 798, 1134, 1167, 1424
SatI GCNGC 5 cut(s) 54, 91, 94, 118, 121
Sau3AI GATC 8 cut(s) 78, 186, 218, 571, 985, 1186, 1315, 1398
Sau96I GGNCC 1 cut(s) 1546
SchI GAGTC 2 cut(s) 34, 248
ScrFI CCNGG 3 cut(s) 599, 869, 981
SduI GDGCHC 4 cut(s) 135, 789, 943, 1012
SfaNI GCATC 1 cut(s) 566
SinI GGWCC 1 cut(s) 1546
SmiMI CAYNNNNRTG 4 cut(s) 194, 792, 1128, 1274
SmlI CTYRAG 1 cut(s) 1320
SmoI CTYRAG 1 cut(s) 1320
SsiI CCGC 6 cut(s) 53, 94, 117, 120, 265, 682
SspMI CTAG 2 cut(s) 1098, 1227
SstI GAGCTC 1 cut(s) 943
StyD4I CCNGG 3 cut(s) 597, 867, 979
StyI CCWWGG 1 cut(s) 562
TaaI ACNGT 4 cut(s) 658, 730, 922, 1514
TaqI TCGA 3 cut(s) 126, 138, 1537
TatI WGTACW 1 cut(s) 1114
TauI GCSGC 4 cut(s) 56, 96, 120, 123
TfiI GAWTC 3 cut(s) 583, 627, 1091
Tru1I TTAA 6 cut(s) 375, 764, 798, 1134, 1167, 1424
Tru9I TTAA 6 cut(s) 375, 764, 798, 1134, 1167, 1424
TscAI CASTG 8 cut(s) 274, 661, 735, 744, 1185, 1281, 1318, 1519
TseFI GTSAC 1 cut(s) 1101
TseI GCWGC 1 cut(s) 90
Tsp45I GTSAC 1 cut(s) 1101
TspDTI ATGAA 5 cut(s) 182, 197, 687, 1083, 1229
TspGWI ACGGA 1 cut(s) 21
TspRI CASTG 8 cut(s) 274, 661, 735, 744, 1185, 1281, 1318, 1519
Tth111I GACNNNGTC 1 cut(s) 1514
VpaK11BI GGWCC 1 cut(s) 1546
XapI RAATTY 3 cut(s) 150, 347, 1069
XceI RCATGY 2 cut(s) 228, 1224
XmiI GTMKAC 1 cut(s) 1239
XmnI GAANNNNTTC 2 cut(s) 312, 1083
XspI CTAG 2 cut(s) 1098, 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.