AT3G58790

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
21742071 .. 21746324
4254 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G58790.2

Sequence Viewer

Length: 1623 bp
ATGAAGTTTTACATATCAGCGACGGGGATTAAGAAGGTTACGATATCAAATCCCGGCGTCGGAATCGGTAAAGGAAGCGGAGGATGTGCGGCTGCAGCGGCGGCGTTAGCAGCGCGGAGATTCTCTAGTCGCACGTTGTTACTGTTGCTGCTGCTGCTCGCTATCGTCCTCCCTTTTATCTTCGTCAGGTTCGCGTTTCTCGTCCTCGAATCTGCCTCCGTTTGCGATTCACCACTCGATTGCATGGGACTCAGACTTTTCCGTGGGGGCGACACATCTCTGAAAATTGGGGAAGAGTTGACACGGGCTCTAGTGGAAGAGACGACAGATCATCAGGACGTTAATGGAAGAGGAACGAAGGGATCATTGGAGTCATTCGACGACCTTGTTAAGGAGATGACGTTAAAACGCCGTGACATAAGGGCGTTTGCTTCCGTGACTAAGAAGATGCTGTTGCAGATGGAACGTAAAGTCCAATCAGCGAAACATCATGAGTTAGTGTACTGGCATTTAGCCTCTCACGGTATTCCTAAAAGCCTCCATTGCCTTTCCCTCAGATTAACTGAAGAGTACTCTGTAAATGCAATGGCTCGAATGCGTTTGCCTCCGCCTGAGTCCGTATCACGTCTGACCGACCCATCTTTTCATCATATTGTCCTCCTGACTGACAATGTCCTTGCTGCCTCTGTCGTCATATCGTCTACTGTACAAAACGCTGTGAATCCCGAGAAGTTTGTCTTTCATATTGTTACCGATAAGAAAACCTATACCCCTATGCATGCTTGGTTTGCTATCAACTCTGCTTCATCACCAGTTGTTGAAGTAAAGGGACTTCATCAGTATGATTGGCCTCAAGAAGTGAACTTCAAAGTTAGAGAGATGCTGGACATTCACCGCTTAATTTGGAGACGACATTATCAAAATTTGAAAGACTCTGATTTTAGTTTTGTTGAGGGTACTCATGAGCAGTCCTTGCAAGCTCTAAATCCTAGCTGCCTTGCCCTTTTGAACCATCTTCGCATTTACATTCCCAAGCTTTTTCCAGATCTCAACAAGATAGTGTTGTTGGATGATGATGTAGTAGTACAGAGCGATCTTTCGTCTTTATGGGAAACGGATCTCAACGGTAAAGTTGTTGGTGCTGTCGTTGATTCGTGGTGCGGAGACAACTGTTGCCCCGGAAGAAAATACAAAGACTATTTCAACTTCTCACATCCTTTGATCTCATCAAACTTAGTTCAAGAAGACTGTGCTTGGCTTTCTGGTATGAATGTCTTTGATCTCAAAGCCTGGAGACAAACCAATATTACTGAAGCTTACTCTACATGGCTAAGACTCAGTGTTAGGTCAGGACTACAATTATGGCAACCAGGGGCTTTACCACCGACATTACTTGCTTTCAAAGGACTTACACAGTCTCTTGAACCATCATGGCACGTCGCTGGACTAGGTTCTCGATCCGTAAAATCCCCTCAAGAGATTCTGAAATCTGCTTCGGTTTTACATTTCAGCGGTCCAGCAAAACCGTGGCTAGAGATCAGTAACCCTGAGGTACGATCTCTTTGGTATAGATACGTAAATTCCTCCGACATCTTCGTTAGAAAATGCAAAATCATGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

540

Amino Acids

60.62

Weight (kDa)

8.85

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 50 - 381 1.5e-68 Glycosyl transferase family 8
Glyco_transf_24 PF18404 210 - 308 2.7e-06 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 701
AccII CGCG 2 cut(s) 115, 194
AciI CCGC 9 cut(s) 78, 89, 98, 101, 115, 608, 895, 1161, 1512
AclWI GGATC 3 cut(s) 370, 1125, 1452
AcsI RAATTY 2 cut(s) 922, 1579
AcuI CTGAAG 2 cut(s) 585, 1332
AcyI GRCGYC 1 cut(s) 57
AfaI GTAC 6 cut(s) 503, 572, 708, 958, 1086, 1554
AfiI CCNNNNNNNGG 2 cut(s) 59, 391
AgsI TTSAA 8 cut(s) 821, 868, 928, 1009, 1204, 1241, 1402, 1424
AjiI CACGTC 2 cut(s) 626, 1438
AjnI CCWGG 2 cut(s) 1289, 1369
AjuI GAANNNNNNNTTGG 2 cut(s) 350, 382
AloI GAACNNNNNNTCC 2 cut(s) 456, 488
AluBI AGCT 4 cut(s) 980, 993, 1036, 1316
AluI AGCT 4 cut(s) 980, 993, 1036, 1316
Alw26I GTCTC 5 cut(s) 314, 901, 1158, 1288, 1422
AlwI GGATC 3 cut(s) 370, 1125, 1452
Ama87I CYCGRG 1 cut(s) 725
AoxI GGCC 1 cut(s) 848
ApeKI GCWGC 8 cut(s) 92, 95, 110, 148, 151, 154, 680, 993
ApoI RAATTY 2 cut(s) 922, 1579
AspLEI GCGC 1 cut(s) 115
AspS9I GGNCC 1 cut(s) 1514
AsuC2I CCSGG 2 cut(s) 54, 1179
AsuHPI GGTGA 3 cut(s) 222, 801, 884
AvaI CYCGRG 1 cut(s) 725
AvaII GGWCC 1 cut(s) 1514
AxyI CCTNAGG 1 cut(s) 1548
BanII GRGCYC 1 cut(s) 310
BarI GAAGNNNNNNTAC 2 cut(s) 816, 848
BbsI GAAGAC 1 cut(s) 1251
BbvI GCAGC 8 cut(s) 79, 107, 122, 135, 138, 141, 667, 980
BccI CCATC 4 cut(s) 454, 646, 1020, 1435
BceAI ACGGC 1 cut(s) 396
BciT130I CCWGG 2 cut(s) 1291, 1371
BcnI CCSGG 2 cut(s) 54, 1179
BcoDI GTCTC 5 cut(s) 314, 901, 1158, 1288, 1422
BfaI CTAG 5 cut(s) 126, 311, 990, 1448, 1532
BfmI CTRYAG 1 cut(s) 93
BglII AGATCT 1 cut(s) 1045
BmcAI AGTACT 1 cut(s) 572
Bme1390I CCNGG 4 cut(s) 54, 1179, 1291, 1371
Bme18I GGWCC 1 cut(s) 1514
BmeT110I CYCGRG 1 cut(s) 725
BmgBI CACGTC 2 cut(s) 626, 1438
BmgT120I GGNCC 1 cut(s) 1514
BmrFI CCNGG 4 cut(s) 54, 1179, 1291, 1371
BmsI GCATC 2 cut(s) 438, 870
BpiI GAAGAC 1 cut(s) 1251
BpmI CTGGAG 1 cut(s) 1312
BpuEI CTTGAG 2 cut(s) 837, 1458
BpuMI CCSGG 2 cut(s) 54, 1179
BsaAI YACGTR 1 cut(s) 1576
BsaHI GRCGYC 1 cut(s) 57
BsaJI CCNNGG 4 cut(s) 262, 1177, 1370, 1526
BsaXI ACNNNNNCTCC 2 cut(s) 386, 416
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 391
Bse1I ACTGG 2 cut(s) 509, 812
Bse21I CCTNAGG 1 cut(s) 1548
Bse3DI GCAATG 2 cut(s) 541, 591
BseBI CCWGG 2 cut(s) 1291, 1371
BseDI CCNNGG 4 cut(s) 262, 1177, 1370, 1526
BseGI GGATG 3 cut(s) 89, 1075, 1213
BseLI CCNNNNNNNGG 2 cut(s) 59, 391
BseMI GCAATG 2 cut(s) 541, 591
BseMII CTCAG 5 cut(s) 265, 568, 603, 1351, 1539
BseNI ACTGG 2 cut(s) 509, 812
BseXI GCAGC 8 cut(s) 79, 107, 122, 135, 138, 141, 667, 980
Bsh1236I CGCG 2 cut(s) 115, 194
BshFI GGCC 1 cut(s) 850
BsiHKCI CYCGRG 1 cut(s) 725
BsiSI CCGG 2 cut(s) 54, 1179
BslFI GGGAC 2 cut(s) 261, 843
BslI CCNNNNNNNGG 2 cut(s) 59, 391
BsmAI GTCTC 5 cut(s) 314, 901, 1158, 1288, 1422
BsmBI CGTCTC 2 cut(s) 314, 901
BsmFI GGGAC 2 cut(s) 261, 843
BsmI GAATGC 1 cut(s) 600
BsnI GGCC 1 cut(s) 850
BsoBI CYCGRG 1 cut(s) 725
Bsp1286I GDGCHC 1 cut(s) 310
Bsp1407I TGTACA 1 cut(s) 706
BspACI CCGC 9 cut(s) 78, 89, 98, 101, 115, 608, 895, 1161, 1512
BspANI GGCC 1 cut(s) 850
BspCNI CTCAG 5 cut(s) 264, 567, 604, 1350, 1540
BspFNI CGCG 2 cut(s) 115, 194
BspHI TCATGA 3 cut(s) 490, 961, 1614
BspMAI CTGCAG 1 cut(s) 97
BspPI GGATC 3 cut(s) 370, 1125, 1452
BsrDI GCAATG 2 cut(s) 541, 591
BsrGI TGTACA 1 cut(s) 706
BsrI ACTGG 2 cut(s) 509, 812
BssECI CCNNGG 4 cut(s) 262, 1177, 1370, 1526
BssNI GRCGYC 1 cut(s) 57
Bst2UI CCWGG 2 cut(s) 1291, 1371
Bst4CI ACNGT 8 cut(s) 144, 524, 706, 1127, 1172, 1250, 1416, 1527
Bst6I CTCTTC 4 cut(s) 288, 312, 343, 561
BstACI GRCGYC 1 cut(s) 57
BstAPI GCANNNNNTGC 1 cut(s) 973
BstAUI TGTACA 1 cut(s) 706
BstBAI YACGTR 1 cut(s) 1576
BstC8I GCNNGC 3 cut(s) 159, 780, 978
BstDEI CTNAG 8 cut(s) 251, 441, 554, 612, 1234, 1331, 1337, 1548
BstDSI CCRYGG 2 cut(s) 262, 1526
BstENI CCTNNNNNAGG 1 cut(s) 389
BstF5I GGATG 3 cut(s) 89, 1075, 1213
BstFNI CGCG 2 cut(s) 115, 194
BstHHI GCGC 1 cut(s) 115
BstMAI GTCTC 5 cut(s) 314, 901, 1158, 1288, 1422
BstMWI GCNNNNNNNGC 9 cut(s) 95, 98, 101, 107, 110, 154, 543, 788, 973
BstNI CCWGG 2 cut(s) 1291, 1371
BstNSI RCATGY 1 cut(s) 782
BstSCI CCNGG 4 cut(s) 52, 1177, 1289, 1369
BstSFI CTRYAG 1 cut(s) 93
BstSNI TACGTA 1 cut(s) 1576
BstUI CGCG 2 cut(s) 115, 194
BstV1I GCAGC 8 cut(s) 79, 107, 122, 135, 138, 141, 667, 980
BstV2I GAAGAC 1 cut(s) 1251
BstX2I RGATCY 2 cut(s) 1045, 1117
BstYI RGATCY 2 cut(s) 1045, 1117
Bsu36I CCTNAGG 1 cut(s) 1548
BsuRI GGCC 1 cut(s) 850
BtgI CCRYGG 2 cut(s) 262, 1526
BtrI CACGTC 2 cut(s) 626, 1438
BtsCI GGATG 3 cut(s) 89, 1075, 1213
BtsIMutI CAGTG 1 cut(s) 1345
Cac8I GCNNGC 3 cut(s) 159, 780, 978
CciI TCATGA 3 cut(s) 490, 961, 1614
CfoI GCGC 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 1514
CseI GACGC 1 cut(s) 46
Csp6I GTAC 6 cut(s) 502, 571, 707, 957, 1085, 1553
CviAII CATG 7 cut(s) 244, 491, 779, 962, 1326, 1431, 1615
CviQI GTAC 6 cut(s) 502, 571, 707, 957, 1085, 1553
DdeI CTNAG 8 cut(s) 251, 441, 554, 612, 1234, 1331, 1337, 1548
Eam1104I CTCTTC 4 cut(s) 288, 312, 343, 561
EarI CTCTTC 4 cut(s) 288, 312, 343, 561
EciI GGCGGA 1 cut(s) 597
Eco105I TACGTA 1 cut(s) 1576
Eco24I GRGCYC 1 cut(s) 310
Eco32I GATATC 1 cut(s) 45
Eco47I GGWCC 1 cut(s) 1514
Eco57I CTGAAG 2 cut(s) 585, 1332
Eco81I CCTNAGG 1 cut(s) 1548
Eco88I CYCGRG 1 cut(s) 725
EcoNI CCTNNNNNAGG 1 cut(s) 389
EcoRII CCWGG 2 cut(s) 1289, 1369
EcoRV GATATC 1 cut(s) 45
EcoT22I ATGCAT 1 cut(s) 780
EcoT38I GRGCYC 1 cut(s) 310
Esp3I CGTCTC 2 cut(s) 314, 901
FaeI CATG 7 cut(s) 247, 494, 782, 965, 1329, 1434, 1618
FalI AAGNNNNNCTT 2 cut(s) 722, 754
FaqI GGGAC 2 cut(s) 261, 843
FatI CATG 7 cut(s) 243, 490, 778, 961, 1325, 1430, 1614
FblI GTMKAC 1 cut(s) 701
FokI GGATG 3 cut(s) 96, 1082, 1200
FriOI GRGCYC 1 cut(s) 310
FspBI CTAG 5 cut(s) 126, 311, 990, 1448, 1532
GlaI GCGC 1 cut(s) 114
GsuI CTGGAG 1 cut(s) 1312
HaeIII GGCC 1 cut(s) 850
HapII CCGG 2 cut(s) 54, 1179
HgaI GACGC 1 cut(s) 46
HhaI GCGC 1 cut(s) 115
Hin1I GRCGYC 1 cut(s) 57
Hin1II CATG 7 cut(s) 247, 494, 782, 965, 1329, 1434, 1618
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HincII GTYRAC 1 cut(s) 300
HindII GTYRAC 1 cut(s) 300
HindIII AAGCTT 2 cut(s) 1034, 1314
HpaII CCGG 2 cut(s) 54, 1179
HphI GGTGA 3 cut(s) 222, 801, 884
Hpy166II GTNNAC 4 cut(s) 300, 502, 702, 862
Hpy188I TCNGA 8 cut(s) 62, 254, 282, 557, 630, 937, 1485, 1588
Hpy8I GTNNAC 4 cut(s) 300, 502, 702, 862
Hpy99I CGWCG 4 cut(s) 25, 62, 383, 1442
HpyAV CCTTC 2 cut(s) 28, 352
HpyCH4III ACNGT 8 cut(s) 144, 524, 706, 1127, 1172, 1250, 1416, 1527
HpyCH4IV ACGT 7 cut(s) 134, 339, 401, 466, 625, 1437, 1575
HpyCH4V TGCA 7 cut(s) 95, 243, 457, 584, 778, 976, 1608
HpyF10VI GCNNNNNNNGC 9 cut(s) 95, 98, 101, 107, 110, 154, 543, 788, 973
HpyF3I CTNAG 8 cut(s) 251, 441, 554, 612, 1234, 1331, 1337, 1548
HpySE526I ACGT 7 cut(s) 134, 339, 401, 466, 625, 1437, 1575
Hsp92I GRCGYC 1 cut(s) 57
Hsp92II CATG 7 cut(s) 247, 494, 782, 965, 1329, 1434, 1618
HspAI GCGC 1 cut(s) 113
Lsp1109I GCAGC 8 cut(s) 79, 107, 122, 135, 138, 141, 667, 980
LweI GCATC 2 cut(s) 438, 870
MaeI CTAG 5 cut(s) 126, 311, 990, 1448, 1532
MaeII ACGT 7 cut(s) 134, 339, 401, 466, 625, 1437, 1575
MaeIII GTNAC 6 cut(s) 37, 138, 413, 436, 748, 1541
MflI RGATCY 2 cut(s) 1045, 1117
MhlI GDGCHC 1 cut(s) 310
MluCI AATT 5 cut(s) 285, 900, 922, 1358, 1579
MlyI GAGTC 5 cut(s) 243, 380, 623, 926, 1329
MmeI TCCRAC 3 cut(s) 40, 1047, 1611
Mph1103I ATGCAT 1 cut(s) 780
MseI TTAA 6 cut(s) 30, 342, 390, 404, 560, 899
MslI CAYNNNNRTG 1 cut(s) 840
MspA1I CMGCKG 2 cut(s) 98, 1512
MspI CCGG 2 cut(s) 54, 1179
MspR9I CCNGG 4 cut(s) 54, 1179, 1291, 1371
Mva1269I GAATGC 1 cut(s) 600
MvaI CCWGG 2 cut(s) 1291, 1371
MvnI CGCG 2 cut(s) 115, 194
MwoI GCNNNNNNNGC 9 cut(s) 95, 98, 101, 107, 110, 154, 543, 788, 973
NciI CCSGG 2 cut(s) 54, 1179
NlaIII CATG 7 cut(s) 247, 494, 782, 965, 1329, 1434, 1618
NmuCI GTSAC 2 cut(s) 413, 436
NsiI ATGCAT 1 cut(s) 780
NspI RCATGY 1 cut(s) 782
PaeI GCATGC 1 cut(s) 782
PagI TCATGA 3 cut(s) 490, 961, 1614
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PctI GAATGC 1 cut(s) 600
PfeI GAWTC 7 cut(s) 63, 120, 209, 227, 721, 1151, 1480
PflFI GACNNNGTC 1 cut(s) 671
PleI GAGTC 5 cut(s) 243, 379, 622, 926, 1329
PpsI GAGTC 5 cut(s) 243, 379, 622, 926, 1329
Ppu21I YACGTR 1 cut(s) 1576
Psp6I CCWGG 2 cut(s) 1289, 1369
PspGI CCWGG 2 cut(s) 1289, 1369
PspPI GGNCC 1 cut(s) 1514
PstI CTGCAG 1 cut(s) 97
PsuI RGATCY 2 cut(s) 1045, 1117
PsyI GACNNNGTC 1 cut(s) 671
RsaI GTAC 6 cut(s) 503, 572, 708, 958, 1086, 1554
RsaNI GTAC 6 cut(s) 502, 571, 707, 957, 1085, 1553
RseI CAYNNNNRTG 1 cut(s) 840
SaqAI TTAA 6 cut(s) 30, 342, 390, 404, 560, 899
Sau96I GGNCC 1 cut(s) 1514
ScaI AGTACT 1 cut(s) 572
SchI GAGTC 5 cut(s) 243, 380, 623, 926, 1329
ScrFI CCNGG 4 cut(s) 54, 1179, 1291, 1371
SduI GDGCHC 1 cut(s) 310
SfaNI GCATC 2 cut(s) 438, 870
SfcI CTRYAG 1 cut(s) 93
SinI GGWCC 1 cut(s) 1514
SmiMI CAYNNNNRTG 1 cut(s) 840
SmlI CTYRAG 2 cut(s) 852, 1473
SmoI CTYRAG 2 cut(s) 852, 1473
SnaBI TACGTA 1 cut(s) 1576
SphI GCATGC 1 cut(s) 782
Sse9I AATT 5 cut(s) 285, 900, 922, 1358, 1579
SsiI CCGC 9 cut(s) 78, 89, 98, 101, 115, 608, 895, 1161, 1512
SspI AATATT 1 cut(s) 1306
SspMI CTAG 5 cut(s) 126, 311, 990, 1448, 1532
StyD4I CCNGG 4 cut(s) 52, 1177, 1289, 1369
TaaI ACNGT 8 cut(s) 144, 524, 706, 1127, 1172, 1250, 1416, 1527
TaiI ACGT 7 cut(s) 137, 342, 404, 469, 628, 1440, 1578
TaqI TCGA 5 cut(s) 207, 237, 378, 592, 1456
TaqII GACCGA 1 cut(s) 647
TasI AATT 5 cut(s) 285, 900, 922, 1358, 1579
TatI WGTACW 4 cut(s) 501, 570, 706, 1084
TauI GCSGC 3 cut(s) 92, 101, 104
TfiI GAWTC 7 cut(s) 63, 120, 209, 227, 721, 1151, 1480
Tru1I TTAA 6 cut(s) 30, 342, 390, 404, 560, 899
Tru9I TTAA 6 cut(s) 30, 342, 390, 404, 560, 899
TscAI CASTG 1 cut(s) 1345
TseFI GTSAC 2 cut(s) 413, 436
TseI GCWGC 8 cut(s) 92, 95, 110, 148, 151, 154, 680, 993
Tsp45I GTSAC 2 cut(s) 413, 436
TspDTI ATGAA 6 cut(s) 17, 635, 731, 795, 824, 1283
TspGWI ACGGA 6 cut(s) 208, 251, 424, 607, 1130, 1450
TspRI CASTG 1 cut(s) 1345
Tth111I GACNNNGTC 1 cut(s) 671
VpaK11BI GGWCC 1 cut(s) 1514
XagI CCTNNNNNAGG 1 cut(s) 389
XapI RAATTY 2 cut(s) 922, 1579
XceI RCATGY 1 cut(s) 782
XcmI CCANNNNNNNNNTGG 1 cut(s) 1524
XmiI GTMKAC 1 cut(s) 701
XspI CTAG 5 cut(s) 126, 311, 990, 1448, 1532
ZrmI AGTACT 1 cut(s) 572
Zsp2I ATGCAT 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.