Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008066

Physical Location & Seq

Genomic Coordinates Reverse (-)

22078972 .. 22086236

Gene Structure 7265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G59770.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4893 bp

ATGGATCTGCATCCACCAGGTGGTTCAAAAAAGACATCTGTAGTTGTTGTCACCTTAGACACTGGTGAAGTCTATGTCATTGCAAGTTTGTTATCTAAGGCTGATACTCAAGTTATCTATATCGATCCTACGACTGGTATCCTGCGGTACAATGGGAAGCCTGGCCTTGATAATTTTAAGTCAGAGCGTGAAGCCTTAGATTATATTACGAATGGATCAAGAGGAGGTGTTAGAAGCTCTGTTTATGCCAGGGCAATACTCGGTTATGCTGTCTTGGGGAGCTTTGGGATGCTTTTAGTTGCGACCAGGCTAAATCCAAGTATTCCAGATTTGCCTGGTGGTGGATGTGTATATACAGTGGCTGAGAGTCAATGGGTCAAAATACCACTCTACAATCCACAGCCTCAAGGGAAAGGTGAAACCAAGAATATTCAGGAGTTGACTGAGCTTGACATCGACGGGAAGCACTATTTCTGTGATACTAGAGACATCACTCGGCCCTTCCCAAGCCGTATGCCACTTCAAAGCCCTGATGATGAATTTGTTTGGAATAGATGGTTGTCCGTGCCTTTTAAGAATATTGGGCTACCTGAACACTGTGTCATTCTTCTGCAGGGGTTTGCAGAATATCGACCTTTTGGGAGCTCAGGCCAGCTAGAAGGGATTGTTGCTCTAATGGCCCGTCGTAGCAGACTGCATCCAGGGACTCGTTACCTAGCTAGGGGCATTAATTCATGTTCTGGCACAGGTAACGAAGTTGAGTGTGAGCAGCTTGTATGGATACCTAAAAGAAATGGTCAAAGCATTGCTTTCAACTCGTACATTTGGCGACGTGGCACCATACCAATATGGTGGGGTGCAGAATTAAAGATGACTGCGGCAGAAGCAGAAATTTATGTGGCAGATAGGGATCCTTATAAAGGCAGTACAGAGTATTACCAAAGGTTAAGCAAGCGATATGATACTAGGAATCTAGATGCACCTGTTGGAGAAAACCAGAAGAAAAAGGCTTTTGTTCCTATTGTGTGCGTTAATTTACTAAGAAGTGGAGAAGGGAAATCAGAATGTATCTTAGTACAACATTTTGAAGAATCGATGAACTTTATCAAATCCAGTGGAAAGCTTCCTTATACTCGTGTTCACCTGATAAATTATGATTGGCATGCCAGCGTGAAACTAAAAGGGGAACAGCAAACTATTGAAGGATTGTGGATGTATCTAAAATCTCCCACTATGGCAATAGGAATTTCTGAAGGTGACTATTTGCCTTCACGTCAAAGACTGAAAGATTGCAGAGGTGAGGTAATCTGTATTGATGACATTGAAGGTGCCTTCTGTTTGAGATCACATCAAAATGGGGTGATACGTTTTAACTGCGCTGATTCCTTGGATCGAACAAATGCGGCTAGTTTCTTTGGTGGTCTTCAAGTGTTTGTAGAGCAATGTAGAAGGCTGGGAATATCACTTGATACTGATCTTGGATATGGTCATAATTCTGTTAATAATCAGGGGGGATATAACGCTCCCCTTCCACCGGGATGGGAAAAAAGAGCTGATGCCGTAACTGGAAAATCATATTATATAGATCACAATACAAAGACAACAACATGGAGTCATCCATGTCCTGATAAACCATGGAAGAGACTTGACATGAGGTTTGAGGAATTTAAGAGATCAACTATCTTATCTCCTGTGTCAGAACTTGCCGATCTTTTTCTGCAACAAGGTGATATCCATGCAACCCTCTATACTGGCTCGAAAGCTATGCACAGCCAAATTCTCAACATCTTCAGTGAAGAATCAGGAGCATTTAAACAGTTTTCTGCAGCACAGAAAAACATGAAGATTACACTACAGAGAAGATATAAAAATGCTATGGTTGATAGTTCACGGCAAAAACAGCTCGAGATGTTTCTGGGAATGAGGCTTTTCAAGCATCTTCCATCAATTCCTGTCCAGCCTTTACATGTACTTTCTCGACCATCTGGTTTCTTTCTGAAACCTGTACCTAACATGTCCGAAAGTTCCAATGATGGGTCCAGTCTGCTGAGTATCAAGAGGAAGGACATAACTTGGCTATGTCCACAAGCTGCAGATATTGTTGAATTATTTATCTATCTCAGTGAGCCTTGCCATGTATGTCAACTTCTACTGACCATATCACACGGTGCGGATGATTTGACATGTCCATCCACTGTGGACGTGAGAACTGGACGCCACATAGAGGACCTTAAATTAGTTGTTGAGGGTGCTTCAATACCACGCTGTGCAAATGGTACAAATCTTCTGGTACCCTTACCAGGGCCAATTAGTTCTGAGGATATGGCTGTTACTGGAGCTGGTGCACGTCTTCATGAAAAAGATACGTCAAGTCTTTCACTGCTATATGATTTTGAAGAACTAGAAGGACAGTTGGATTTCTTAACCCGTGTAGTTGCTGTTACATTTTATCCAGCTGGTGCTGTTAGAATTCCTATGACTCTTGGTCAGATAGAAGTCCTTGGAATTTCTCTTCCATGGAAAGGAATGTTTACTTGTGAACGTACTGGAGGAAGATTAGCTGAACTTGCAAGGAAACCAGATGAAGATGGAAGTCCTTTTTCATCTTGTTCTGACTTGAATCCGTTTGCTGCAACAACATCTTTACAGGCTGAAACTGTTTCCACACCAGTACAACAGAAGGATCCCTTTCCCAGTAATCTGCTTGACCTTTTGACAGGAGAGGACTCTTCTTCTGACCCCTTCCCACAACCAGTGGTGGAATGTATTGCAAGTGGAGGCAATGACATGCTTGATTTCTTAGACGAAGCAGTTGTTGAATATCGCGGCTCTGACACTGTTCCTGACGGGTCTGTCCCACAAAATAAAAGGCCCAAGGACAGTGGTGCTCATCTGTACTTAAATTGCCTAAAGTCCCTTGCGGGTCCAAACATGGCAAAGAAGCTTGAGTTTGTAGAAGCTATGAAGCTTGAAATTGAACGTCTACGTCTCAATATTTCTGCAGCAGAAAGAGATAGGGCACTGTTATCGATTGGAATTGATCCAGCTACCATTAATCCAAACTCTTCATACGACGAGTTATATATTGGAAGATTATGCAAAATAGCAAATGCACTTGCAGTTATGGGCCAGGCTTCTCTTGAAGATAAAATTATAGCTTCTATTGGTCTAGAGAAGCTGGAAAATAATGTGATAGATTTCTGGAACATAACCAGAATTGGTGAGGGTTGTGATGGCGGAATGTGTCAAGTCCGAGCCGAGGTCAATAAAAGTCCAGTTGGATCTTCTACCAAGAGTTCAAGAGGAGAGTCGGGCTCAGTGTTCTTGTGCTTCCAATGTATGAAAAAAGCTTGCAAGTTTTGTTGTGCTGGAAAAGGAGCTCTTCTGCTTTCAAAATCCTACTCCAGGGACACTGCGAATGGAGGTGGAAGTCTTGCAGATGTCTCTGCTACTTCGATAGGTTCAGATCATTACATTTGTAAAAAATGCTGCAGCTCGATAGTGCTTGAAGCCCTGATTGTAGATTATGTAAGGGTCATGGTCAGCTTGCGAAGAAGTGGCCGTGTTGATAATGCTGGTCGGGAAGCTTTGAATGAGGTATTTGGATCTAACATTACAAATCACCTTGCTGTTAGAGGTCAACCTTCTCCTAATCGAGAAGACTTCAATTTCCTTCGTCAAATTTTGGGTAAAGAGGAGTCGCTTTCTGAGTTCCCATTTGCAAGCTTCTTACATAAGGTCGAAACTGCGACTGATTCAGCACCATTTTTCTCATTGCTCACCCCTCTGAATCTTGCTTCAAGTAATGCCTACTGGAAAGCTCCTCCGTCTGCAGACTCTGTTGAAGCCGCCATTGTTCTCAACACCCTTTCAGATGTCAGCAGTGTGATTCTACTCGTTAGTCCATGTGGTTACTCTGATGCTGATGCTCCTACCGTCCAAATTTGGGCGAGCAGCGACATAAACAAGGAAGCACGGACTTTGATGGGAAAGTGGGATGTACAGTCCTTTATTAGATCTTCGCCTGAGCTTTCTGGTTCAGAAAAGTCTGGTAGAGCACCTAGGCATATAAAATTTGCTTTCAAGAATCCTGTCCGTTGCCGCATTATATGGATAACACTGCGTCTTCCTAGGCTTGGATCTAGTAGCTCAGTTAGTTTGGACAAAAACATCAATCTCTTATCTTTGGATGAGAACCCATTTGCTCCAATTCCTCGACGTGCCTCTTTTGGAGCAACCATTGAGAATGATCCATGTATTCATGCAAAACACATCTTGGTCACTGGAAACACCGTGAGGGATAAAACGCTACAAAGTGTTGAGAGCATGAGCGTAAGAAACTGGCTGGACAGAGCCCCACGTTTGAATAGATTCCTGATACCATTAGAGACTGAGAGACCAATGGAGAATGATCTAGTCTTGGAACTTTATCTGCAACCTGCTTCACCTTTAGCTGCTGGATTCCGTTTAGATGCTTTTAGTGCGATAAAGCCTCGTGTAACCCACTCGCCTTCTTCAGATGTAGTTGACATTTGGGACCCGACGAGTGTCATAATGGAAGATAGACACGTCTCTCCGGCCATCTTGTATATACAAGTATCTGTTCTACAGGAGCAATACAAAATGGTGACAATCGCGGAATACAGATTGCCTGAGGCGAGAGATGGAACAAAGTTGTATTTTGACTTCCCTAAACAGATACAAGCACAGAGAGTATCGTTTAAACTGCTAGGAGATGTAGCAGCTTTTACAGATGAGCCCGCAGAGGCTGTTGATTTGAGCAGCCGGGCTTCTCCTTTTGCTGCAGGACTGTCTTTAGCAAACAGGATCAAGCTATATTACTATGCGGATCCTTACGAAGTAGGCAAATGGACTAGCCTTTCAAGTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0031348 GO:0033612 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Syja_N WW

Protein Analysis

1630

Amino Acids

180.06

Weight (kDa)

6.33

Isoelectric Point (pI)

45.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syja_N	PF02383	2 - 167	6.3e-25	SacI homology domain
WW	PF00397	285 - 315	3.9e-11	WW domain
SAC9_GBDL_1st	PF24790	430 - 615	9.7e-95	SAC9 first GBDL domain
SAC9_C8D	PF24791	846 - 946	2.5e-61	SAC9 C8D domain
SAC9_GBDL_2nd	PF24789	1007 - 1205	5.7e-90	SAC9 second GBDL domain
SAC9_C	PF24765	1229 - 1405	1.4e-82	SAC9 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59770 AT3G59770 AT3G59770 AT3G59770
fragaria_vesca	FvH4_1g00530 FvH4_1g00530
malus_domestica	MD02G1004400.v1.1 MD15G1148100.v1.1
prunus_persica	Prupe.7G266700_v2.0.a1 Prupe.7G266700_v2.0.a1 Prupe.7G266700_v2.0.a1 Prupe.7G266700_v2.0.a1
pyrus_communis	pycom02g00290 pycom15g13240
rosa_chinensis	RchiOBHm_Chr2g0085161
rosa_laevigata	RLG00000015661
rosa_multiflora	Rmu_sc0008647.1_g000009
rosa_roxburghii	Rroxscaffold_2G00155600
rosa_rugosa	Rorug01G0458000
rosa_samantha	Rh2AG006300 Rh2BG007100 Rh2CG007900 Rh2DG008100
rosa_wichuraiana	Rw2G000600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	918
AasI	GACNNNNNNGTC	1 cut(s)	2852
Acc36I	ACCTGC	1 cut(s)	4447
Acc65I	GGTACC	1 cut(s)	2290
AccB1I	GGYRCC	3 cut(s)	836, 1328, 2290
AccB7I	CCANNNNNTGG	1 cut(s)	20
AccI	GTMKAC	1 cut(s)	2983
AccII	CGCG	2 cut(s)	2826, 4637
AcoI	YGGCCR	2 cut(s)	3559, 4578
AcuI	CTGAAG	3 cut(s)	1272, 1774, 4500
AcyI	GRCGYC	1 cut(s)	2215
AdeI	CACNNNGTG	3 cut(s)	20, 2168, 2267
AflIII	ACRYGT	4 cut(s)	1966, 2013, 2183, 4567
AhdI	GACNNNNNGTC	1 cut(s)	2484
AjiI	CACGTC	6 cut(s)	833, 1274, 2203, 2348, 4220, 4570
AjnI	CCWGG	9 cut(s)	16, 160, 248, 305, 334, 700, 2299, 3129, 3404
Alw21I	GWGCWC	5 cut(s)	647, 2347, 2890, 3382, 4060
Alw26I	GTCTC	7 cut(s)	480, 1636, 2993, 3448, 4382, 4390, 4576
Alw44I	GTGCAC	1 cut(s)	2343
AlwNI	CAGNNNCTG	3 cut(s)	362, 3839, 4769
Ama87I	CYCGRG	1 cut(s)	1904
AoxI	GGCC	9 cut(s)	163, 497, 649, 678, 2303, 2870, 3127, 3559, 4578
ApaLI	GTGCAC	1 cut(s)	2343
ArsI	GACNNNNNNTTYG	2 cut(s)	1640, 1672
AseI	ATTAAT	2 cut(s)	729, 3054
Asp700I	GAANNNNTTC	1 cut(s)	4370
Asp718I	GGTACC	1 cut(s)	2290
AspA2I	CCTAGG	2 cut(s)	4061, 4130
AspLEI	GCGC	1 cut(s)	1379
AspS9I	GGNCC	9 cut(s)	498, 679, 2037, 2227, 2303, 2871, 2924, 3127, 4537
AsuC2I	CCSGG	2 cut(s)	1536, 4787
AvaI	CYCGRG	1 cut(s)	1904
AvaII	GGWCC	4 cut(s)	2037, 2227, 2924, 4537
AvrII	CCTAGG	2 cut(s)	4061, 4130
AxyI	CCTNAGG	1 cut(s)	4653
BaeGI	GKGCMC	2 cut(s)	2347, 3022
BaeI	ACNNNNGTAYC	2 cut(s)	96, 129
BamHI	GGATCC	3 cut(s)	910, 2683, 4849
BanI	GGYRCC	3 cut(s)	836, 1328, 2290
BanII	GRGCYC	5 cut(s)	647, 3317, 3382, 4357, 4761
BarI	GAAGNNNNNNTAC	4 cut(s)	2130, 2162, 4670, 4702
BauI	CACGAG	2 cut(s)	1134, 4494
BbsI	GAAGAC	4 cut(s)	1415, 2342, 3666, 4118
Bbv12I	GWGCWC	5 cut(s)	647, 2347, 2890, 3382, 4060
BceAI	ACGGC	4 cut(s)	495, 1544, 1907, 3546
BcgI	CGANNNNNNTGC	4 cut(s)	1747, 1781, 3009, 3043
BciT130I	CCWGG	9 cut(s)	18, 162, 250, 307, 336, 702, 2301, 3131, 3406
BciVI	GTATCC	2 cut(s)	149, 774
BcnI	CCSGG	2 cut(s)	1536, 4787
BcoDI	GTCTC	7 cut(s)	480, 1636, 2993, 3448, 4382, 4390, 4576
BfuAI	ACCTGC	1 cut(s)	4447
BfuI	GTATCC	2 cut(s)	149, 774
BglII	AGATCT	1 cut(s)	4016
BlnI	CCTAGG	2 cut(s)	4061, 4130
Bme18I	GGWCC	4 cut(s)	2037, 2227, 2924, 4537
BmeRI	GACNNNNNGTC	1 cut(s)	2484
BmeT110I	CYCGRG	1 cut(s)	1904
BmgBI	CACGTC	6 cut(s)	833, 1274, 2203, 2348, 4220, 4570
BmgT120I	GGNCC	9 cut(s)	498, 679, 2037, 2227, 2303, 2871, 2924, 3127, 4537
BmrI	ACTGGG	1 cut(s)	2688
BmsI	GCATC	9 cut(s)	19, 279, 706, 967, 1546, 1945, 3910, 3916, 4462
BmuI	ACTGGG	1 cut(s)	2688
BoxI	GACNNNNGTC	1 cut(s)	4547
BpiI	GAAGAC	4 cut(s)	1415, 2342, 3666, 4118
BplI	GAGNNNNNCTC	2 cut(s)	3299, 3331
BpmI	CTGGAG	3 cut(s)	2355, 2568, 3388
Bpu10I	CCTNAGC	2 cut(s)	646, 4026
BpuEI	CTTGAG	3 cut(s)	93, 390, 2966
BpuMI	CCSGG	2 cut(s)	1536, 4787
Bsa29I	ATCGAT	3 cut(s)	123, 1094, 3029
BsaBI	GATNNNNATC	3 cut(s)	9, 909, 1473
BsaHI	GRCGYC	1 cut(s)	2215
BsaI	GGTCTC	1 cut(s)	4390
Bse21I	CCTNAGG	1 cut(s)	4653
Bse3DI	GCAATG	5 cut(s)	78, 804, 1448, 2788, 3773
Bse8I	GATNNNNATC	3 cut(s)	9, 909, 1473
BseBI	CCWGG	9 cut(s)	18, 162, 250, 307, 336, 702, 2301, 3131, 3406
BseCI	ATCGAT	3 cut(s)	123, 1094, 3029
BseJI	GATNNNNATC	3 cut(s)	9, 909, 1473
BseMI	GCAATG	5 cut(s)	78, 804, 1448, 2788, 3773
BseRI	GAGGAG	4 cut(s)	237, 3318, 3710, 3813
BseSI	GKGCMC	2 cut(s)	2347, 3022
BseYI	CCCAGC	1 cut(s)	1453
BsgI	GTGCAG	1 cut(s)	879
Bsh1236I	CGCG	2 cut(s)	2826, 4637
BshFI	GGCC	9 cut(s)	165, 499, 651, 680, 2305, 2872, 3129, 3561, 4580
BshNI	GGYRCC	3 cut(s)	836, 1328, 2290
BshVI	ATCGAT	3 cut(s)	123, 1094, 3029
BsiHKAI	GWGCWC	5 cut(s)	647, 2347, 2890, 3382, 4060
BsiHKCI	CYCGRG	1 cut(s)	1904
BsiSI	CCGG	3 cut(s)	1535, 4577, 4786
BslFI	GGGAC	5 cut(s)	718, 2840, 2899, 3422, 4550
BsmAI	GTCTC	7 cut(s)	480, 1636, 2993, 3448, 4382, 4390, 4576
BsmBI	CGTCTC	2 cut(s)	2993, 4576
BsmFI	GGGAC	5 cut(s)	718, 2840, 2899, 3422, 4550
BsnI	GGCC	9 cut(s)	165, 499, 651, 680, 2305, 2872, 3129, 3561, 4580
Bso31I	GGTCTC	1 cut(s)	4390
BsoBI	CYCGRG	1 cut(s)	1904
Bsp1286I	GDGCHC	9 cut(s)	647, 2347, 2890, 3022, 3317, 3382, 4060, 4357, 4761
Bsp1407I	TGTACA	1 cut(s)	4000
Bsp19I	CCATGG	2 cut(s)	1634, 2516
BspANI	GGCC	9 cut(s)	165, 499, 651, 680, 2305, 2872, 3129, 3561, 4580
BspDI	ATCGAT	3 cut(s)	123, 1094, 3029
BspFNI	CGCG	2 cut(s)	2826, 4637
BspHI	TCATGA	1 cut(s)	2353
BspMAI	CTGCAG	7 cut(s)	615, 1828, 2095, 3004, 3494, 3835, 4807
BspMI	ACCTGC	1 cut(s)	4447
BspQI	GCTCTTC	1 cut(s)	3387
BspT107I	GGYRCC	3 cut(s)	836, 1328, 2290
BspTNI	GGTCTC	1 cut(s)	4390
BsrDI	GCAATG	5 cut(s)	78, 804, 1448, 2788, 3773
BsrGI	TGTACA	1 cut(s)	4000
BssNI	GRCGYC	1 cut(s)	2215
BssSI	CACGAG	2 cut(s)	1134, 4494
BssT1I	CCWWGG	7 cut(s)	1386, 1634, 2500, 2516, 2874, 4061, 4130
Bst2BI	CACGAG	2 cut(s)	1134, 4494
Bst2UI	CCWGG	9 cut(s)	18, 162, 250, 307, 336, 702, 2301, 3131, 3406
Bst6I	CTCTTC	5 cut(s)	1634, 2517, 2734, 3070, 3387
BstACI	GRCGYC	1 cut(s)	2215
BstAUI	TGTACA	1 cut(s)	4000
BstC8I	GCNNGC	9 cut(s)	653, 953, 1164, 1168, 3352, 3548, 3724, 3952, 4761
BstDSI	CCRYGG	2 cut(s)	1634, 2516
BstENI	CCTNNNNNAGG	2 cut(s)	918, 3403
BstFNI	CGCG	2 cut(s)	2826, 4637
BstHHI	GCGC	1 cut(s)	1379
BstMAI	GTCTC	7 cut(s)	480, 1636, 2993, 3448, 4382, 4390, 4576
BstMWI	GCNNNNNNNGC	6 cut(s)	677, 884, 1900, 1933, 2567, 4481
BstNI	CCWGG	9 cut(s)	18, 162, 250, 307, 336, 702, 2301, 3131, 3406
BstNSI	RCATGY	5 cut(s)	1166, 1970, 2017, 2187, 2791
BstPAI	GACNNNNGTC	1 cut(s)	4547
BstSLI	GKGCMC	2 cut(s)	2347, 3022
BstUI	CGCG	2 cut(s)	2826, 4637
BstV2I	GAAGAC	4 cut(s)	1415, 2342, 3666, 4118
BstX2I	RGATCY	8 cut(s)	4, 910, 2683, 3281, 3605, 4016, 4139, 4849
BstXI	CCANNNNNNTGG	2 cut(s)	852, 1539
BstYI	RGATCY	8 cut(s)	4, 910, 2683, 3281, 3605, 4016, 4139, 4849
Bsu15I	ATCGAT	3 cut(s)	123, 1094, 3029
Bsu36I	CCTNAGG	1 cut(s)	4653
BsuI	GTATCC	2 cut(s)	149, 774
BsuRI	GGCC	9 cut(s)	165, 499, 651, 680, 2305, 2872, 3129, 3561, 4580
BsuTUI	ATCGAT	3 cut(s)	123, 1094, 3029
BtgI	CCRYGG	2 cut(s)	1634, 2516
BtrI	CACGTC	6 cut(s)	833, 1274, 2203, 2348, 4220, 4570
BtsI	GCAGTG	4 cut(s)	2378, 3411, 3889, 4118
BveI	ACCTGC	1 cut(s)	4447
Cac8I	GCNNGC	9 cut(s)	653, 953, 1164, 1168, 3352, 3548, 3724, 3952, 4761
CaiI	CAGNNNCTG	3 cut(s)	362, 3839, 4769
CciI	TCATGA	1 cut(s)	2353
CfoI	GCGC	1 cut(s)	1379
Cfr13I	GGNCC	9 cut(s)	498, 679, 2037, 2227, 2303, 2871, 2924, 3127, 4537
ClaI	ATCGAT	3 cut(s)	123, 1094, 3029
CseI	GACGC	2 cut(s)	2223, 4112
CsiI	ACCWGGT	1 cut(s)	16
CspCI	CAANNNNNGTGG	4 cut(s)	1096, 1131, 2863, 2898
DraI	TTTAAA	2 cut(s)	1813, 4723
DraIII	CACNNNGTG	3 cut(s)	20, 2168, 2267
DrdI	GACNNNNNNGTC	1 cut(s)	2852
DriI	GACNNNNNGTC	1 cut(s)	2484
DseDI	GACNNNNNNGTC	1 cut(s)	2852
EaeI	YGGCCR	2 cut(s)	3559, 4578
Eam1104I	CTCTTC	5 cut(s)	1634, 2517, 2734, 3070, 3387
Eam1105I	GACNNNNNGTC	1 cut(s)	2484
EarI	CTCTTC	5 cut(s)	1634, 2517, 2734, 3070, 3387
EciI	GGCGGA	1 cut(s)	3252
Ecl136II	GAGCTC	2 cut(s)	645, 3380
Eco130I	CCWWGG	7 cut(s)	1386, 1634, 2500, 2516, 2874, 4061, 4130
Eco24I	GRGCYC	5 cut(s)	647, 3317, 3382, 4357, 4761
Eco31I	GGTCTC	1 cut(s)	4390
Eco32I	GATATC	1 cut(s)	1732
Eco47I	GGWCC	4 cut(s)	2037, 2227, 2924, 4537
Eco53kI	GAGCTC	2 cut(s)	645, 3380
Eco57I	CTGAAG	3 cut(s)	1272, 1774, 4500
Eco81I	CCTNAGG	1 cut(s)	4653
Eco88I	CYCGRG	1 cut(s)	1904
EcoICRI	GAGCTC	2 cut(s)	645, 3380
EcoNI	CCTNNNNNAGG	2 cut(s)	918, 3403
EcoO109I	RGGNCCY	2 cut(s)	2227, 4537
EcoRI	GAATTC	1 cut(s)	2469
EcoRII	CCWGG	9 cut(s)	16, 160, 248, 305, 334, 700, 2299, 3129, 3404
EcoRV	GATATC	1 cut(s)	1732
EcoT14I	CCWWGG	7 cut(s)	1386, 1634, 2500, 2516, 2874, 4061, 4130
EcoT38I	GRGCYC	5 cut(s)	647, 3317, 3382, 4357, 4761
ErhI	CCWWGG	7 cut(s)	1386, 1634, 2500, 2516, 2874, 4061, 4130
Esp3I	CGTCTC	2 cut(s)	2993, 4576
FalI	AAGNNNNNCTT	6 cut(s)	793, 825, 2672, 2704, 3366, 3398
FaqI	GGGAC	5 cut(s)	718, 2840, 2899, 3422, 4550
FauI	CCCGC	2 cut(s)	2914, 4768
FblI	GTMKAC	1 cut(s)	2983
FriOI	GRGCYC	5 cut(s)	647, 3317, 3382, 4357, 4761
GlaI	GCGC	1 cut(s)	1378
GsaI	CCCAGC	1 cut(s)	1457
GsuI	CTGGAG	3 cut(s)	2355, 2568, 3388
HaeIII	GGCC	9 cut(s)	165, 499, 651, 680, 2305, 2872, 3129, 3561, 4580
HapII	CCGG	3 cut(s)	1535, 4577, 4786
HgaI	GACGC	2 cut(s)	2223, 4112
HhaI	GCGC	1 cut(s)	1379
Hin1I	GRCGYC	1 cut(s)	2215
Hin6I	GCGC	1 cut(s)	1377
HinP1I	GCGC	1 cut(s)	1377
HincII	GTYRAC	4 cut(s)	441, 2144, 3641, 4528
HindII	GTYRAC	4 cut(s)	441, 2144, 3641, 4528
HindIII	AAGCTT	6 cut(s)	1121, 2942, 2966, 3348, 3585, 3724
HpaII	CCGG	3 cut(s)	1535, 4577, 4786
Hpy99I	CGWCG	6 cut(s)	461, 687, 834, 3077, 4221, 4546
HpyF10VI	GCNNNNNNNGC	6 cut(s)	677, 884, 1900, 1933, 2567, 4481
Hsp92I	GRCGYC	1 cut(s)	2215
HspAI	GCGC	1 cut(s)	1377
KflI	GGGWCCC	1 cut(s)	4537
KpnI	GGTACC	1 cut(s)	2294
LguI	GCTCTTC	1 cut(s)	3387
LweI	GCATC	9 cut(s)	19, 279, 706, 967, 1546, 1945, 3910, 3916, 4462
MabI	ACCWGGT	1 cut(s)	16
MflI	RGATCY	8 cut(s)	4, 910, 2683, 3281, 3605, 4016, 4139, 4849
MhlI	GDGCHC	9 cut(s)	647, 2347, 2890, 3022, 3317, 3382, 4060, 4357, 4761
MlyI	GAGTC	8 cut(s)	376, 700, 1621, 2473, 2720, 3317, 3707, 3830
MmeI	TCCRAC	3 cut(s)	967, 2394, 3259
MroXI	GAANNNNTTC	1 cut(s)	4370
MslI	CAYNNNNRTG	2 cut(s)	1353, 1537
MspA1I	CMGCKG	1 cut(s)	2456
MspI	CCGG	3 cut(s)	1535, 4577, 4786
MssI	GTTTAAAC	1 cut(s)	4723
MvaI	CCWGG	9 cut(s)	18, 162, 250, 307, 336, 702, 2301, 3131, 3406
MvnI	CGCG	2 cut(s)	2826, 4637
MwoI	GCNNNNNNNGC	6 cut(s)	677, 884, 1900, 1933, 2567, 4481
NciI	CCSGG	2 cut(s)	1536, 4787
NcoI	CCATGG	2 cut(s)	1634, 2516
NmeAIII	GCCGAG	2 cut(s)	475, 3283
NmuCI	GTSAC	4 cut(s)	49, 1256, 4279, 4627
NspI	RCATGY	5 cut(s)	1166, 1970, 2017, 2187, 2791
PaeI	GCATGC	1 cut(s)	1166
PaeR7I	CTCGAG	1 cut(s)	1904
PagI	TCATGA	1 cut(s)	2353
PciI	ACATGT	3 cut(s)	1966, 2013, 2183
PciSI	GCTCTTC	1 cut(s)	3387
PdmI	GAANNNNTTC	1 cut(s)	4370
PflMI	CCANNNNNTGG	1 cut(s)	20
PleI	GAGTC	8 cut(s)	375, 700, 1620, 2473, 2720, 3316, 3706, 3830
PmeI	GTTTAAAC	1 cut(s)	4723
PpsI	GAGTC	8 cut(s)	375, 700, 1620, 2473, 2720, 3316, 3706, 3830
PpuMI	RGGWCCY	2 cut(s)	2227, 4537
PscI	ACATGT	3 cut(s)	1966, 2013, 2183
PshAI	GACNNNNGTC	1 cut(s)	4547
PshBI	ATTAAT	2 cut(s)	729, 3054
PsiI	TTATAA	1 cut(s)	918
Psp124BI	GAGCTC	2 cut(s)	647, 3382
Psp5II	RGGWCCY	2 cut(s)	2227, 4537
Psp6I	CCWGG	9 cut(s)	16, 160, 248, 305, 334, 700, 2299, 3129, 3404
PspFI	CCCAGC	1 cut(s)	1453
PspGI	CCWGG	9 cut(s)	16, 160, 248, 305, 334, 700, 2299, 3129, 3404
PspPI	GGNCC	9 cut(s)	498, 679, 2037, 2227, 2303, 2871, 2924, 3127, 4537
PspPPI	RGGWCCY	2 cut(s)	2227, 4537
PstI	CTGCAG	7 cut(s)	615, 1828, 2095, 3004, 3494, 3835, 4807
PstNI	CAGNNNCTG	3 cut(s)	362, 3839, 4769
PsuI	RGATCY	8 cut(s)	4, 910, 2683, 3281, 3605, 4016, 4139, 4849
PvuII	CAGCTG	1 cut(s)	2456
RseI	CAYNNNNRTG	2 cut(s)	1353, 1537
SacI	GAGCTC	2 cut(s)	647, 3382
SapI	GCTCTTC	1 cut(s)	3387
Sau96I	GGNCC	9 cut(s)	498, 679, 2037, 2227, 2303, 2871, 2924, 3127, 4537
SchI	GAGTC	8 cut(s)	376, 700, 1621, 2473, 2720, 3317, 3707, 3830
SduI	GDGCHC	9 cut(s)	647, 2347, 2890, 3022, 3317, 3382, 4060, 4357, 4761
SexAI	ACCWGGT	1 cut(s)	16
SfaNI	GCATC	9 cut(s)	19, 279, 706, 967, 1546, 1945, 3910, 3916, 4462
Sfr274I	CTCGAG	1 cut(s)	1904
SinI	GGWCC	4 cut(s)	2037, 2227, 2924, 4537
SlaI	CTCGAG	1 cut(s)	1904
SmiMI	CAYNNNNRTG	2 cut(s)	1353, 1537
SmlI	CTYRAG	4 cut(s)	108, 405, 1904, 2945
SmoI	CTYRAG	4 cut(s)	108, 405, 1904, 2945
SphI	GCATGC	1 cut(s)	1166
SspI	AATATT	3 cut(s)	430, 580, 2995
SstI	GAGCTC	2 cut(s)	647, 3382
StyI	CCWWGG	7 cut(s)	1386, 1634, 2500, 2516, 2874, 4061, 4130
TatI	WGTACW	6 cut(s)	926, 1075, 1969, 2671, 2895, 4000
TauI	GCSGC	5 cut(s)	881, 1406, 2829, 3851, 4104
TseFI	GTSAC	4 cut(s)	49, 1256, 4279, 4627
Tsp45I	GTSAC	4 cut(s)	49, 1256, 4279, 4627
TspGWI	ACGGA	6 cut(s)	553, 2613, 3816, 3991, 4085, 4454
Van91I	CCANNNNNTGG	1 cut(s)	20
VneI	GTGCAC	1 cut(s)	2343
VpaK11BI	GGWCC	4 cut(s)	2037, 2227, 2924, 4537
VspI	ATTAAT	2 cut(s)	729, 3054
XagI	CCTNNNNNAGG	2 cut(s)	918, 3403
XbaI	TCTAGA	2 cut(s)	973, 3169
XceI	RCATGY	5 cut(s)	1166, 1970, 2017, 2187, 2791
XhoI	CTCGAG	1 cut(s)	1904
XmaJI	CCTAGG	2 cut(s)	4061, 4130
XmiI	GTMKAC	1 cut(s)	2983
XmnI	GAANNNNTTC	1 cut(s)	4370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.