Rroxscaffold_2G00155600

Domain with 2 conserved Trp (W) residues

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
92000438 .. 92009383
8946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00155600.1

Sequence Viewer

Length: 3531 bp
ATGGAATCACCAGTTGGAGGTGTGAGGCAAACATCTGTGATAGTTGTTACATTGGAGACCGGTGAAGTATATGTGATTGCGAGTTTGTCTTCTAGGCTTGATACTCAGGTCATATACGTTGATCCTACTACTGGAGCACTTCGCTACAATGCGAAGCCAGGATTTGATGTTTTTAAATCCGAAAAGGAAGCTCTGAATTACATTACAAATGGTTCGGAGTGGTTGTGTAGGAGCACTACCTATGCCCGTGCAATATTGGGATATGCTGCTTTGGGCGGCTTTGGTTTGCTGCTTGTGGCTACCAAGTTGACTACTACTGTTCCGAATCTGCCTGGCGGAGGGTCTGTGTATACAGTGACTGAGAGCCAATGGATCAAGATATTGCTTCAGAATCCACAGCCCCAGGGGAAAGGAGAAGTGAAGAATGTTAATGAATTGACTGACATGGACATTGATGGGAAGCATTACTTTTGTGAGGCAAGGGACATCACTCGGCCATTTCCTAGCCGTATGTGCTTGCGTGAACCTGACGATGAATTCGTTTGGAATGCTTGGTTCTCGATGCCTTTCAAAAACATTGGCCTTCCGCACCATTGTGTCACTCTTCTTCAGGGTTTTGCAGAATATCGAGGTTTTGGATCCTCAGGGAATCTGGAAGGAGTTGTTGCTCTCATAGCTCGTCGTAGCAGGCTGCATCCTGGTACTCGATACTTGGCTAGGGGATTAAATTCATGTTATAGCACAGGAAACGAAGTGGAGTGTGAGCAACTTGTATGGGTCCCTAGAAGGGTTGGCCAAACTGTTCCTTTCAACACGTATGTCTGGCGGCGGGGGACAATTCCAATCTGGTGGGGTGCAGAGTTAAAGATCACTGCTGCAGAAGCAGAAATATATGTTTCAGACCGCGATCCTTATAAAGGGAGCGCAGATTACTACCAGAGGTTGAGTAAGAGGTATGATGCACGGAATTTAGATGAAGCTGTTGGGGGGACTCAGAATAGAAAAGCATTAGTTCCAATTGTATGTATCAACTTGCTTAGAAATGGAGAAGGAAAGTCAGAATCCATTTTAGTACAGCATTTTGAGGAATCTTTAAACTACATCAGATCCACAGGAAAACTTCCTTATACGCGAATTCATTTAATAAATTATGACTGGCATGCAAGTATAAAGTTAAAAGGCGAACAGCAAACCATTGAAGGATTATGGAGACATCTAAAAGCACCCACTGTATCTATAGCCATTTCTGAAGGAGATTATCTGCCTTCACGAGACAGAATTAAGGACTGCAGAGGAGAAATTATCTACAATGATGACTTTGAAGGTGCTTTCTGCTTGAGATCCCATCAAAATGGTGTAATACGTTTCAACTGTGCTGATTCTTTGGATAGAACAAATGCTGCAAGTTATTTTGGCTCTCTCCAGGTTTTTGTGGAGCAGTGTAGGCGGCTTGGTATATCGCTTGACAGTGATTTGGCATTTGGTTATCCGTCAATGACTAATTATGCCGGATATACAGCTCCTTTGCCACCAGGCTGGGAGAAGAGGTCGGATGCAGTAACAGGGAAAACATACTACATTGATCACAATACTAGGACCACAACATGGATGCATCCATGTCCCGATAAACCTTGGAAAAGATTTGATATGTCATTTGAGGAATTCAAGAGGTCAACAATTTTATCTCCAGTATCCACGCTTGCAGATCTTTTTCTGCTCGCTGGTGATATTCATGCAACACTTTATACTGGCTCTAAAGCTATGCATAGTCAAATCCTCAGCATTTTCAATGAAGATGCTGGAAAGTTTAAACAATTTTCTGCAGCACAGAATATGAAAATAACTTTGCAGAGACGGTATAAAAATGCAGTTGTAGACAGCTCTCGTCAAAAGCAACTGGAAATGTTCCTTGGAATGAGATTATTCAAGCATCTTCCATCAGTTTTCTTTCACCCTCTAAATGTAGTCTCTCGACCATCTGGTTTTTTCCTTAAGCCAGTTGCTAACATGTTTCCAAGTTCCAATGGTGAAGCCAGTCTTCTGAGTTTCAAAAGAAAAGACCTAATCTGGGTTTGCCCACAAGCTGCAGATGTGGTTGAACTTTTTATCTATCTAGGTGAGCCTTGCCATGTATGTCAGCTTCTTCTCACAGTATCCCATGGTGTAGATGACTCGACCTATCCATCAACAGTTGATGTAAGGACGGGCCGCTGTTTAGATGGGCTAAAACTGGTCTTGGAGGGTGCTTCGATCCCTCACTGTGTAAATGGAACAAACCTCGTGATACCCATACCGGGGCCAATTAGTCAAGAGGATATGGCTATAACAGGAGCTGGTGCACGCCTTCATGCTCAAGATAAATCTACCCTTCCATTATTGTATGATTTTGAAGAATTGGAAGGAGAACTTGACTTCCTTACTCGTGTAGTTGCCCTTACATTTTATCCCGCTGTCTCTGGAAGAACCCCTATCACTCTTGGTGAGATAGAAGTCCTTGGAGTTTCTCTTCCTTGGAAGGGTATATTTAATAAAGAAGGCCTTGGTGCAAGATTTCCTGAACAGCCTAAAAACTTTCAGAATGAAACCAAACCATCTTTTTCTCGTTCAGATACCAATCCATTTTCTGGTGCTTCATCTAATGATGTGCCACCACCAGTGCAACCAAGTGTGTCCGCAGACAATTTGGTTGACCTGTTGACTGGAGAGGTCATCCTTTCAGAACAGATTGCTCAGCCAGTGATAGGAAATGCTGTGGATAAGGGAGGTGACTTGCTTGATTTTTTAGACCAAGCTGTTGTTGAATATCATGGTGCTCAAAATGATCATAAATTGTCTTCATCACACGATGGTAGATCTTCAGATAGCAGTTCCCAGCAGTACATTGATCGATTGAAATCACTTACTGGGCCACGTATGGGAAGAAAACTAGACTTCATGGAAGCTATGAAACTTGAAATTAAGCGACTCCGGCTGAATATTTCTGCTGCTGAAAGGGATAGAGCTTTATTATCAATTGGAACTGATCCTGCTACCATAAATCCTAATGTGTTACTTGATGAACGTTACATGGGAAGATTGTGCAGAGTTGCAAACTCCCTTGCTCTTCTTGGACAAGCATCCTTGGAAGACAGAATTACATCTGCTATTGGTCTTGAGACTACTGATGACAATGTGATAGATTTTTGGAATATAAGTGAAATTGGGGAGTGTTGTTACGGGGGCATGTGTGAGGTGCGTGCTGAAACTGATCCACGTACAAGTAAATCCTTTTCGGAATCATCAGGTGGAGGTTCTCCTTCAATCTTGTTATGTTCTCAATGTCAAAGGAAAGTTTGTAAAGTTTGTTGTGCTGGGAGAGGAGCCCTTCTGGTTTCAGGCTATGGCTCAAGGGAGGCCACGAATTACAATGGTGTGGTAAGGCAGGGGGATCAAGCCATGGTAGCCAGGTTGATATCTCTACAAATCGTTCAGTCGTGCTTGATGGTGTTGTTTGCAAACGATGCTGCCATGAGATTGTGCTTGATGCTTTGA

Protein Analysis

1176

Amino Acids

130.34

Weight (kDa)

6.31

Isoelectric Point (pI)

39.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Syja_N PF02383 84 - 390 1.6e-39 SacI homology domain
WW PF00397 509 - 539 7.3e-12 WW domain
SAC9_GBDL_1st PF24790 653 - 838 9.1e-99 SAC9 first GBDL domain
SAC9_C8D PF24791 1066 - 1139 8.5e-18 SAC9 C8D domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 915
AccB7I CCANNNNNTGG 2 cut(s) 1605, 2624
AccI GTMKAC 2 cut(s) 350, 1875
AccII CGCG 2 cut(s) 906, 1132
AclI AACGTT 1 cut(s) 3061
AcoI YGGCCR 2 cut(s) 494, 793
AcsI RAATTY 5 cut(s) 536, 727, 967, 1134, 1661
AcuI CTGAAG 4 cut(s) 371, 593, 1269, 2841
AfaI GTAC 4 cut(s) 703, 1074, 2879, 3256
AflII CTTAAG 1 cut(s) 1991
AflIII ACRYGT 2 cut(s) 813, 2007
AgeI ACCGGT 1 cut(s) 59
AjnI CCWGG 7 cut(s) 157, 331, 402, 697, 1422, 1531, 3443
AjuI GAANNNNNNNTTGG 3 cut(s) 29, 1893, 1925
AleI CACNNNNGTG 1 cut(s) 594
AloI GAACNNNNNNTCC 2 cut(s) 2397, 2429
Alw21I GWGCWC 4 cut(s) 139, 236, 2341, 2815
Alw26I GTCTC 7 cut(s) 50, 1204, 1266, 1846, 1972, 2458, 3149
Alw44I GTGCAC 1 cut(s) 2337
AlwNI CAGNNNCTG 2 cut(s) 359, 2333
AoxI GGCC 8 cut(s) 494, 580, 793, 2206, 2297, 2536, 2906, 3393
ApaLI GTGCAC 1 cut(s) 2337
ApeKI GCWGC 9 cut(s) 266, 289, 691, 875, 1400, 1823, 2084, 2984, 3503
ApoI RAATTY 5 cut(s) 536, 727, 967, 1134, 1661
ArsI GACNNNNNNTTYG 2 cut(s) 521, 553
AsiGI ACCGGT 1 cut(s) 59
AspLEI GCGC 1 cut(s) 926
AspS9I GGNCC 5 cut(s) 778, 1596, 2206, 2297, 2906
AsuC2I CCSGG 1 cut(s) 2295
AsuHPI GGTGA 7 cut(s) 74, 1736, 1943, 2039, 2129, 2492, 2777
AvaII GGWCC 2 cut(s) 778, 1596
AxyI CCTNAGG 1 cut(s) 643
BaeGI GKGCMC 1 cut(s) 2341
BaeI ACNNNNGTAYC 2 cut(s) 93, 126
BalI TGGCCA 1 cut(s) 795
BamHI GGATCC 1 cut(s) 638
BanII GRGCYC 1 cut(s) 3364
BarI GAAGNNNNNNTAC 2 cut(s) 2124, 2156
BauI CACGAG 3 cut(s) 1269, 2279, 2421
BbsI GAAGAC 4 cut(s) 81, 2030, 2826, 3132
Bbv12I GWGCWC 4 cut(s) 139, 236, 2341, 2815
BbvCI CCTCAGC 1 cut(s) 1778
BbvI GCAGC 9 cut(s) 253, 276, 678, 862, 1387, 1835, 2071, 2971, 3490
BccI CCATC 9 cut(s) 449, 1353, 1945, 1984, 2191, 2213, 2599, 2840, 3475
BceAI ACGGC 1 cut(s) 492
BciT130I CCWGG 7 cut(s) 159, 333, 404, 699, 1424, 1533, 3445
BciVI GTATCC 2 cut(s) 1702, 2164
BclI TGATCA 2 cut(s) 1582, 2821
BcnI CCSGG 1 cut(s) 2295
BcoDI GTCTC 7 cut(s) 50, 1204, 1266, 1846, 1972, 2458, 3149
BfaI CTAG 7 cut(s) 93, 504, 717, 783, 1593, 2114, 2927
BfmI CTRYAG 5 cut(s) 876, 1236, 1288, 1821, 2085
BfrI CTTAAG 1 cut(s) 1991
BfuI GTATCC 2 cut(s) 1702, 2164
BglII AGATCT 2 cut(s) 1705, 2852
BlpI GCTNAGC 1 cut(s) 2730
Bme1390I CCNGG 8 cut(s) 159, 333, 404, 699, 1424, 1533, 2295, 3445
Bme18I GGWCC 2 cut(s) 778, 1596
BmgT120I GGNCC 5 cut(s) 778, 1596, 2206, 2297, 2906
BmiI GGNNCC 5 cut(s) 640, 779, 780, 2298, 3361
BmrFI CCNGG 8 cut(s) 159, 333, 404, 699, 1424, 1533, 2295, 3445
BmrI ACTGGG 1 cut(s) 2913
BmuI ACTGGG 1 cut(s) 2913
BpiI GAAGAC 4 cut(s) 81, 2030, 2826, 3132
BpmI CTGGAG 4 cut(s) 153, 1406, 1671, 2721
Bpu10I CCTNAGC 1 cut(s) 1778
Bpu1102I GCTNAGC 1 cut(s) 2730
BpuEI CTTGAG 4 cut(s) 1357, 2337, 3173, 3370
BpuMI CCSGG 1 cut(s) 2295
Bsa29I ATCGAT 1 cut(s) 2887
BsaAI YACGTR 3 cut(s) 816, 2912, 3254
BsaBI GATNNNNATC 2 cut(s) 2613, 2893
BsaI GGTCTC 1 cut(s) 50
BsaWI WCCGGW 1 cut(s) 59
BsaXI ACNNNNNCTCC 6 cut(s) 209, 239, 330, 360, 1532, 1562
Bse118I RCCGGY 1 cut(s) 59
Bse21I CCTNAGG 1 cut(s) 643
Bse8I GATNNNNATC 2 cut(s) 2613, 2893
BseBI CCWGG 7 cut(s) 159, 333, 404, 699, 1424, 1533, 3445
BseCI ATCGAT 1 cut(s) 2887
BseGI GGATG 6 cut(s) 694, 1558, 1612, 1614, 2709, 3116
BseJI GATNNNNATC 2 cut(s) 2613, 2893
BseMII CTCAG 7 cut(s) 119, 351, 657, 1007, 1792, 2033, 2744
BseRI GAGGAG 2 cut(s) 1308, 3372
BseSI GKGCMC 1 cut(s) 2341
BseXI GCAGC 9 cut(s) 253, 276, 678, 862, 1387, 1835, 2071, 2971, 3490
BseYI CCCAGC 3 cut(s) 1536, 2871, 3350
BsgI GTGCAG 2 cut(s) 876, 3100
Bsh1236I CGCG 2 cut(s) 906, 1132
BshFI GGCC 8 cut(s) 496, 582, 795, 2208, 2299, 2538, 2908, 3395
BshTI ACCGGT 1 cut(s) 59
BshVI ATCGAT 1 cut(s) 2887
BsiHKAI GWGCWC 4 cut(s) 139, 236, 2341, 2815
BsiSI CCGG 4 cut(s) 60, 1509, 2294, 2968
BslFI GGGAC 5 cut(s) 497, 764, 847, 1003, 1605
BsmAI GTCTC 7 cut(s) 50, 1204, 1266, 1846, 1972, 2458, 3149
BsmBI CGTCTC 1 cut(s) 1846
BsmFI GGGAC 5 cut(s) 497, 764, 847, 1003, 1605
BsmI GAATGC 1 cut(s) 553
BsnI GGCC 8 cut(s) 496, 582, 795, 2208, 2299, 2538, 2908, 3395
Bso31I GGTCTC 1 cut(s) 50
Bsp1286I GDGCHC 5 cut(s) 139, 236, 2341, 2815, 3364
Bsp1720I GCTNAGC 1 cut(s) 2730
Bsp19I CCATGG 2 cut(s) 2158, 3435
BspANI GGCC 8 cut(s) 496, 582, 795, 2208, 2299, 2538, 2908, 3395
BspCNI CTCAG 7 cut(s) 118, 352, 656, 1006, 1791, 2034, 2743
BspDI ATCGAT 1 cut(s) 2887
BspFNI CGCG 2 cut(s) 906, 1132
BspLI GGNNCC 5 cut(s) 640, 779, 780, 2298, 3361
BspMAI CTGCAG 4 cut(s) 880, 1292, 1825, 2089
BspQI GCTCTTC 1 cut(s) 3108
BspTI CTTAAG 1 cut(s) 1991
BspTNI GGTCTC 1 cut(s) 50
BsrFI RCCGGY 1 cut(s) 59
BssAI RCCGGY 1 cut(s) 59
BssNAI GTATAC 1 cut(s) 351
BssSI CACGAG 3 cut(s) 1269, 2279, 2421
BssT1I CCWWGG 8 cut(s) 1631, 1909, 2158, 2494, 2510, 2539, 3120, 3435
Bst1107I GTATAC 1 cut(s) 351
Bst2BI CACGAG 3 cut(s) 1269, 2279, 2421
Bst2UI CCWGG 7 cut(s) 159, 333, 404, 699, 1424, 1533, 3445
Bst6I CTCTTC 4 cut(s) 609, 1538, 2511, 3108
BstAFI CTTAAG 1 cut(s) 1991
BstAPI GCANNNNNTGC 1 cut(s) 3500
BstBAI YACGTR 3 cut(s) 816, 2912, 3254
BstC8I GCNNGC 7 cut(s) 518, 689, 1161, 1701, 1719, 2341, 3237
BstDEI CTNAG 8 cut(s) 105, 360, 643, 993, 1037, 1778, 2042, 2730
BstDSI CCRYGG 2 cut(s) 2158, 3435
BstENI CCTNNNNNAGG 2 cut(s) 336, 915
BstF5I GGATG 6 cut(s) 694, 1558, 1612, 1614, 2709, 3116
BstFNI CGCG 2 cut(s) 906, 1132
BstHHI GCGC 1 cut(s) 926
BstMAI GTCTC 7 cut(s) 50, 1204, 1266, 1846, 1972, 2458, 3149
BstMWI GCNNNNNNNGC 7 cut(s) 513, 674, 881, 1444, 2968, 3440, 3500
BstNI CCWGG 7 cut(s) 159, 333, 404, 699, 1424, 1533, 3445
BstNSI RCATGY 3 cut(s) 1163, 2011, 3226
BstSCI CCNGG 8 cut(s) 157, 331, 402, 697, 1422, 1531, 2293, 3443
BstSFI CTRYAG 5 cut(s) 876, 1236, 1288, 1821, 2085
BstSLI GKGCMC 1 cut(s) 2341
BstUI CGCG 2 cut(s) 906, 1132
BstV1I GCAGC 9 cut(s) 253, 276, 678, 862, 1387, 1835, 2071, 2971, 3490
BstV2I GAAGAC 4 cut(s) 81, 2030, 2826, 3132
BstX2I RGATCY 5 cut(s) 638, 1106, 1340, 1705, 2852
BstXI CCANNNNNNTGG 3 cut(s) 849, 1352, 1536
BstYI RGATCY 5 cut(s) 638, 1106, 1340, 1705, 2852
BstZ17I GTATAC 1 cut(s) 351
Bsu15I ATCGAT 1 cut(s) 2887
Bsu36I CCTNAGG 1 cut(s) 643
BsuI GTATCC 2 cut(s) 1702, 2164
BsuRI GGCC 8 cut(s) 496, 582, 795, 2208, 2299, 2538, 2908, 3395
BsuTUI ATCGAT 1 cut(s) 2887
BtgI CCRYGG 2 cut(s) 2158, 3435
BtsCI GGATG 6 cut(s) 694, 1558, 1612, 1614, 2709, 3116
BtsI GCAGTG 2 cut(s) 870, 1445
BtsIMutI CAGTG 8 cut(s) 360, 870, 1227, 1445, 1474, 2257, 2661, 2742
Cac8I GCNNGC 7 cut(s) 518, 689, 1161, 1701, 1719, 2341, 3237
CaiI CAGNNNCTG 2 cut(s) 359, 2333
CfoI GCGC 1 cut(s) 926
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 5 cut(s) 778, 1596, 2206, 2297, 2906
ClaI ATCGAT 1 cut(s) 2887
Csp6I GTAC 4 cut(s) 702, 1073, 2878, 3255
CspAI ACCGGT 1 cut(s) 59
CviQI GTAC 4 cut(s) 702, 1073, 2878, 3255
DdeI CTNAG 8 cut(s) 105, 360, 643, 993, 1037, 1778, 2042, 2730
DraI TTTAAA 3 cut(s) 175, 1095, 1810
EaeI YGGCCR 2 cut(s) 494, 793
Eam1104I CTCTTC 4 cut(s) 609, 1538, 2511, 3108
EarI CTCTTC 4 cut(s) 609, 1538, 2511, 3108
EciI GGCGGA 1 cut(s) 351
Eco130I CCWWGG 8 cut(s) 1631, 1909, 2158, 2494, 2510, 2539, 3120, 3435
Eco147I AGGCCT 1 cut(s) 2538
Eco24I GRGCYC 1 cut(s) 3364
Eco31I GGTCTC 1 cut(s) 50
Eco32I GATATC 1 cut(s) 3453
Eco47I GGWCC 2 cut(s) 778, 1596
Eco57I CTGAAG 4 cut(s) 371, 593, 1269, 2841
Eco81I CCTNAGG 1 cut(s) 643
EcoNI CCTNNNNNAGG 2 cut(s) 336, 915
EcoO109I RGGNCCY 1 cut(s) 778
EcoRI GAATTC 3 cut(s) 536, 1134, 1661
EcoRII CCWGG 7 cut(s) 157, 331, 402, 697, 1422, 1531, 3443
EcoRV GATATC 1 cut(s) 3453
EcoT14I CCWWGG 8 cut(s) 1631, 1909, 2158, 2494, 2510, 2539, 3120, 3435
EcoT22I ATGCAT 2 cut(s) 1614, 1767
EcoT38I GRGCYC 1 cut(s) 3364
ErhI CCWWGG 8 cut(s) 1631, 1909, 2158, 2494, 2510, 2539, 3120, 3435
Esp3I CGTCTC 1 cut(s) 1846
FalI AAGNNNNNCTT 8 cut(s) 452, 484, 2022, 2054, 2391, 2423, 2523, 2555
FaqI GGGAC 5 cut(s) 497, 764, 847, 1003, 1605
FauI CCCGC 2 cut(s) 822, 2455
FbaI TGATCA 2 cut(s) 1582, 2821
FblI GTMKAC 2 cut(s) 350, 1875
FokI GGATG 6 cut(s) 681, 1565, 1599, 1621, 2696, 3103
FriOI GRGCYC 1 cut(s) 3364
FspBI CTAG 7 cut(s) 93, 504, 717, 783, 1593, 2114, 2927
GlaI GCGC 1 cut(s) 925
GsaI CCCAGC 3 cut(s) 1540, 2875, 3354
GsuI CTGGAG 4 cut(s) 153, 1406, 1671, 2721
HaeIII GGCC 8 cut(s) 496, 582, 795, 2208, 2299, 2538, 2908, 3395
HapII CCGG 4 cut(s) 60, 1509, 2294, 2968
HhaI GCGC 1 cut(s) 926
Hin6I GCGC 1 cut(s) 924
HinP1I GCGC 1 cut(s) 924
HincII GTYRAC 4 cut(s) 309, 1674, 2689, 2697
HindII GTYRAC 4 cut(s) 309, 1674, 2689, 2697
HpaII CCGG 4 cut(s) 60, 1509, 2294, 2968
HphI GGTGA 7 cut(s) 74, 1736, 1943, 2039, 2129, 2492, 2777
Hpy166II GTNNAC 8 cut(s) 309, 351, 524, 1674, 1876, 2339, 2689, 2697
Hpy8I GTNNAC 8 cut(s) 309, 351, 524, 1674, 1876, 2339, 2689, 2697
Hpy99I CGWCG 1 cut(s) 684
HpyCH4IV ACGT 6 cut(s) 117, 815, 1363, 2911, 3061, 3253
HpyF10VI GCNNNNNNNGC 7 cut(s) 513, 674, 881, 1444, 2968, 3440, 3500
HpyF3I CTNAG 8 cut(s) 105, 360, 643, 993, 1037, 1778, 2042, 2730
HpySE526I ACGT 6 cut(s) 117, 815, 1363, 2911, 3061, 3253
HspAI GCGC 1 cut(s) 924
KflI GGGWCCC 1 cut(s) 778
Ksp22I TGATCA 2 cut(s) 1582, 2821
LguI GCTCTTC 1 cut(s) 3108
LmnI GCTCC 7 cut(s) 134, 231, 921, 1435, 1525, 2330, 3359
Lsp1109I GCAGC 9 cut(s) 253, 276, 678, 862, 1387, 1835, 2071, 2971, 3490
MaeI CTAG 7 cut(s) 93, 504, 717, 783, 1593, 2114, 2927
MaeII ACGT 6 cut(s) 117, 815, 1363, 2911, 3061, 3253
MaeIII GTNAC 8 cut(s) 46, 355, 598, 1558, 2765, 3048, 3062, 3212
MfeI CAATTG 2 cut(s) 1017, 3012
MflI RGATCY 5 cut(s) 638, 1106, 1340, 1705, 2852
MhlI GDGCHC 5 cut(s) 139, 236, 2341, 2815, 3364
MlsI TGGCCA 1 cut(s) 795
MluNI TGGCCA 1 cut(s) 795
MlyI GAGTC 3 cut(s) 985, 2165, 2958
MmeI TCCRAC 1 cut(s) 1530
Mox20I TGGCCA 1 cut(s) 795
Mph1103I ATGCAT 2 cut(s) 1614, 1767
MscI TGGCCA 1 cut(s) 795
MslI CAYNNNNRTG 2 cut(s) 594, 1350
Msp20I TGGCCA 1 cut(s) 795
MspA1I CMGCKG 2 cut(s) 2211, 2450
MspCI CTTAAG 1 cut(s) 1991
MspI CCGG 4 cut(s) 60, 1509, 2294, 2968
MspR9I CCNGG 8 cut(s) 159, 333, 404, 699, 1424, 1533, 2295, 3445
MssI GTTTAAAC 1 cut(s) 1810
MunI CAATTG 2 cut(s) 1017, 3012
Mva1269I GAATGC 1 cut(s) 553
MvaI CCWGG 7 cut(s) 159, 333, 404, 699, 1424, 1533, 3445
MvnI CGCG 2 cut(s) 906, 1132
MwoI GCNNNNNNNGC 7 cut(s) 513, 674, 881, 1444, 2968, 3440, 3500
NciI CCSGG 1 cut(s) 2295
NcoI CCATGG 2 cut(s) 2158, 3435
NlaIV GGNNCC 5 cut(s) 640, 779, 780, 2298, 3361
NmeAIII GCCGAG 1 cut(s) 472
NmuCI GTSAC 3 cut(s) 355, 598, 2765
NsiI ATGCAT 2 cut(s) 1614, 1767
NspI RCATGY 3 cut(s) 1163, 2011, 3226
OliI CACNNNNGTG 1 cut(s) 594
PaeI GCATGC 1 cut(s) 1163
PasI CCCWGGG 1 cut(s) 403
PceI AGGCCT 1 cut(s) 2538
PciI ACATGT 1 cut(s) 2007
PciSI GCTCTTC 1 cut(s) 3108
PcsI WCGNNNNNNNCGW 1 cut(s) 537
PctI GAATGC 1 cut(s) 553
PfeI GAWTC 8 cut(s) 5, 325, 391, 649, 1061, 1088, 1379, 3275
PflMI CCANNNNNTGG 2 cut(s) 1605, 2624
PinAI ACCGGT 1 cut(s) 59
PleI GAGTC 3 cut(s) 985, 2165, 2958
PmeI GTTTAAAC 1 cut(s) 1810
PpsI GAGTC 3 cut(s) 985, 2165, 2958
Ppu21I YACGTR 3 cut(s) 816, 2912, 3254
PpuMI RGGWCCY 1 cut(s) 778
PscI ACATGT 1 cut(s) 2007
PsiI TTATAA 1 cut(s) 915
Psp1406I AACGTT 1 cut(s) 3061
Psp5II RGGWCCY 1 cut(s) 778
Psp6I CCWGG 7 cut(s) 157, 331, 402, 697, 1422, 1531, 3443
PspFI CCCAGC 3 cut(s) 1536, 2871, 3350
PspGI CCWGG 7 cut(s) 157, 331, 402, 697, 1422, 1531, 3443
PspN4I GGNNCC 5 cut(s) 640, 779, 780, 2298, 3361
PspPI GGNCC 5 cut(s) 778, 1596, 2206, 2297, 2906
PspPPI RGGWCCY 1 cut(s) 778
PstI CTGCAG 4 cut(s) 880, 1292, 1825, 2089
PstNI CAGNNNCTG 2 cut(s) 359, 2333
PsuI RGATCY 5 cut(s) 638, 1106, 1340, 1705, 2852
RsaI GTAC 4 cut(s) 703, 1074, 2879, 3256
RsaNI GTAC 4 cut(s) 702, 1073, 2878, 3255
RseI CAYNNNNRTG 2 cut(s) 594, 1350
SapI GCTCTTC 1 cut(s) 3108
Sau96I GGNCC 5 cut(s) 778, 1596, 2206, 2297, 2906
SchI GAGTC 3 cut(s) 985, 2165, 2958
ScrFI CCNGG 8 cut(s) 159, 333, 404, 699, 1424, 1533, 2295, 3445
SduI GDGCHC 5 cut(s) 139, 236, 2341, 2815, 3364
SfcI CTRYAG 5 cut(s) 876, 1236, 1288, 1821, 2085
SinI GGWCC 2 cut(s) 778, 1596
SmiMI CAYNNNNRTG 2 cut(s) 594, 1350
SmlI CTYRAG 5 cut(s) 1336, 1991, 2352, 3152, 3385
SmoI CTYRAG 5 cut(s) 1336, 1991, 2352, 3152, 3385
SphI GCATGC 1 cut(s) 1163
SseBI AGGCCT 1 cut(s) 2538
SspI AATATT 2 cut(s) 255, 2977
SspMI CTAG 7 cut(s) 93, 504, 717, 783, 1593, 2114, 2927
StuI AGGCCT 1 cut(s) 2538
StyD4I CCNGG 8 cut(s) 157, 331, 402, 697, 1422, 1531, 2293, 3443
StyI CCWWGG 8 cut(s) 1631, 1909, 2158, 2494, 2510, 2539, 3120, 3435
TaiI ACGT 6 cut(s) 120, 818, 1366, 2914, 3064, 3256
TaqI TCGA 7 cut(s) 560, 628, 706, 1972, 2174, 2249, 2887
TatI WGTACW 2 cut(s) 1072, 2877
TauI GCSGC 4 cut(s) 279, 829, 1450, 2211
TfiI GAWTC 8 cut(s) 5, 325, 391, 649, 1061, 1088, 1379, 3275
TscAI CASTG 8 cut(s) 360, 877, 1234, 1445, 1474, 2264, 2661, 2742
TseFI GTSAC 3 cut(s) 355, 598, 2765
TseI GCWGC 9 cut(s) 266, 289, 691, 875, 1400, 1823, 2084, 2984, 3503
Tsp45I GTSAC 3 cut(s) 355, 598, 2765
TspGWI ACGGA 2 cut(s) 979, 1479
TspRI CASTG 8 cut(s) 360, 877, 1234, 1445, 1474, 2264, 2661, 2742
Van91I CCANNNNNTGG 2 cut(s) 1605, 2624
Vha464I CTTAAG 1 cut(s) 1991
VneI GTGCAC 1 cut(s) 2337
VpaK11BI GGWCC 2 cut(s) 778, 1596
XagI CCTNNNNNAGG 2 cut(s) 336, 915
XapI RAATTY 5 cut(s) 536, 727, 967, 1134, 1661
XceI RCATGY 3 cut(s) 1163, 2011, 3226
XmiI GTMKAC 2 cut(s) 350, 1875
XspI CTAG 7 cut(s) 93, 504, 717, 783, 1593, 2114, 2927
Zsp2I ATGCAT 2 cut(s) 1614, 1767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.