Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0008066

Physical Location & Seq

Genomic Coordinates Reverse (-)

282412 .. 292210

Gene Structure 9799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g00530.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4914 bp

ATGGAATCACCTGTTGGAGGTTTGAGGCAAACATCTGTGATAGTTGTTACATTGGAGACTGGTGAAGTGTATGTGATTGCGAGTCTGTCGTCTAGGCTTGACACTCAGGTTATATATGTTGATCCCACAACTGGAGCTCTTCGCTACAATGAGAAGCCAGGATTCGATGTTTTTAAATCCGAAAAGGAGGCTCTGAATTACATTACAAACGGCTCCGAGTGGCTGTGTAGGAGCACGACCTATGCACGTGCGATCTTGGGGTATGCTGCATTGGGCAGCTTTGGTTTGCTTCTTGTGGCTACCAAGTTGACTGCTACTGTTCCGAATCTGCCTGGTGGAGGGACTGTGTATACTGTGACCGAGAGCCAATGGATCAAGATTTTGCTTCAGAATCCGCAACCGCAGGGGAAAGGGGAAGTAAAGAATGTTAATGAATTGACTGATATGGACATTGATGGGAAGCATTACTTTTGTGAGGCAAGGGACATCACTAGGCCATTTCCCAGCCGAATGTGCTTGCGTGAACCTGATGATGAATTCGTTTGGAATGCTTGGTTCTCGATGCCTTTTAAAAACATTGGGCTCCCACACCACTGTGTCACTCTGCTTCAGGGTTTTGCAGAATATCGAAATTTTGGATCCTCAGGGAATCTGGAAGGAGTTGTTGCTCTCATAGCTCGTCGTAGCAGGCTGCATCCTGGTACTCGGTACTTGGCTAGGGGATTAAATTCATGTTCTAGCACAGGTAACGAGGTGGAGTGCGAGCAACTTGTATGGGTCCCTAAAAGGGCTGGCCAAACTGTTCCTTTCAACACGTATGTTTGGCGGCGGGGTACAATTCCAATCTGGTGGGGTGCAGAGTTAAAGATCACTGCTGCTGAAGCAGAAATATATGTTTCAGACCGCGATCCTTATAAAGGGAGCGCAGATTACTACCAGAGGTTGACTAAGAGGTATGATGCACGGAATTTAGATGTAGCTGTTGGGGGGACTCAGAATAGAAAAGCACTAGTTCCAATTGTATGTATCAACTTGCTTAGGAATGGAGAAGGAAAGTCGGAATCCATTTTAGTACAGCATTTTGAGGAATCTTTAAACTACATCAGATCAACAGGAAAACTTCCTTATACTCGAATTCATCTAGTTAATTATGACTGGCATGCAAGTACAAAGTTAAAAGGCGAACAGCAAACTATTGAAGGATTATGGAAACATCTAAAAGCACCCACTGTATCTATAGGCATTTCTGAAGGAGATTATTTGCCTTCACGAGACAGAATTAAGGAATGCAGAGGAGAAATTATCTACAATGATGACTTTGAGGGAGCTTTCTGCTTAAGATCCCATCAAAATGGTGTAATACGTTTCAACTGCGCTGATTCTTTGGATAGAACAAATGCTGCAAGTTATTTTGGCTCTCTCCAGGTTTTTGTGGAGCAATGTAGGAGGCTAGGTATATCACTTGACAGTGATTTGGCATTTGGTTATCAATCAATGACTAATTATGCCGGATATACAGCTCCTTTGCCACCAGGCTGGGAGAAGAGGTCGGATGCAGTAACAGGGAAAACATACTACATTGATCACAATACGAGGACCACGACATGGATGCATCCATGTCCTGATAAACCTTGGAAGAGATTTGATATGTCATTTGAGGAATTCAAGAGATCAACAATTTTATCTCCAGTATCCCAGCTTGCAGATCTTTTTCTTCTCGCTGGTGATATTCATGCAACACTTTATACTGGTTCCAAAGCTATGCATAGCCAAATCCTCAGCATTTTCAATGAAGATGCTGGAAAGTTTAAACAATTTTCTGCAGCACAGAATATGAAAATAACTTTACAGAGGCGATACAAAAATGCAGTTGTAGACAGCTCTCGTCAAAAGCAACTGGAAATGTTCCTTGGAATGAGATTATTCAAGCATCTTCCATCAGTTTCTTTTCACCCTCTAAATGTAGTCTCTCGACCATCGGGTTTCTTTCTTAAACCAGTTGCTAACATGTTTCCAAGTTCCAGTGGTGAAGCCAGTCTTCTGAGTTTCAGAAGAAAAGACCTAATCTGGGTTTGCCCACAAGCTGCAGATGTGGTTGAACTTTTTATCTATCTAGGTGAGCCTTGCCATGTATGTCAGCTTCTTCTCACAGTATCTCATGGTGCAGATGACTCGACCTATCCATCAACAGTTGATGTAAGGACAGGACGCTGTTTAGACGGGCTAAAACTGGTCTTGGAGGGTGCTTCCATACCTCACTGTGTAAATGGAACAAACCTCATGATACCCATACCTGGGCCTATTAGTCCAGAGGATATGGCTGTAACAGGAGCTGGTTCACGCCTCCATGCTGAAGATATATCTACCCTTCCATTATTGTATGATTTTGAAGAATTGGAAGGAGAACTTGACTTCCTTACTCGTGTAGTTGCCCTTACATTTTATCCTGCTGCCTCGGGAAGAACCCCTATCACTCTTGGTGAGATAGAAGTCCTTGGAGTTTCTCTTCCTTGGAAGGGTGCATTTAATAAAGAAGGCCCTGGTGCAAGACTACCTGAACAGGCTAAAATCTTCCAGAATGAAACCAACTCATCTCTTTCTCGTTCAAATACCAATCCATTTTATGGTGCTTCATCTAAGATTGTGCCACCACCAGTGCAACCAAGTGCATCCGCAAACAATTTGGTTGACCTGTTGACTGGTGAGATCATTTCAGAACACTTTGCTCAGCCAGTGATAGGAAATGCTGTAGACAAGCAAGGTGACTTGCTTGATTTTTTAGACCAAGCTGTTGTTGAATATCATGGTGCTCAAAATGATCTTAAATTGTCTTCATCACACGATGGTAGATCTTCAGATAGCAGTTCCCAGCAGTACATTGATCGATTGAAATCACTTACTGGGCCACGTATGGAAAGAAAACTAGACTTCATGGAAGCGATGAAACTTGAAATTGAGCGGCTCCAGCTGAATATTTCTGCGGCTGAAAGGGATAGAGCTTTATTATCAATAGGAACTGATCCTGCTACTATAAATCCTAACGTGTTACTCGATGAACGTTACATGGGAAGATTGTGCAGAGTTGCGAACTCCCTTGCACATCTTGGACAAGCGTCCTTGGAAGACAGAATTACATCTGCTATTGGTCTTGAGACTACTGATGACAATGTTATAGATTTTTGGAATATAAGTAGAATTGGTGAGTGTTGTTACGGTGGCACGTGTGAGGTGCGTGCTGAAACTGATCCGCATACAAGTAAATCCTTTTCGGGATCATCAGGTGGAGGGTCTCCTTCGATCTTGTTATGTTCTCAATGTCAAAGGAAAGTTTGTAAAGTTTGTTGTGCTGGGAGAGGAGCCCTTCTGGTTTCAGGCTATGGCTCAAGGGACGCCACAAATTATAATGGTGTGGTAAGGCAGGGGGGATCAAGCCATGGTAGCCAGGTTGATATCACTACTAATCGTTCAGTAGTGCTTGATGGTGTTGTTTGCAAGCGATGCTGCAATGAGATTGTGCTTGATGCTTTGATATTGGACTACGTTAGGGTTTTGGTAAGCATGAGGAGAAGTTCCCGTGCAGATGCTGCTGCACATGAAGCCTTGAACCAGGTGACTGGATTTTCCTTAAACGATGGTCTTTCTGAGAGTAATCAGTCTTCTGAAAAGAGATCCATTAAATCTCTGCGACAAGTACTTGATGGAGAGGAATCCCTGGCTGAGTTTCCCTTCGCCAGCTTCTTAAACTCGGTTGAAACGGCTACTGATTCAGCACCACTCTTATCATTACTTGCTCCTCTTGATTGTGGATCACGGCATTCTTACTGGAAAGCTCCTCCTAGTACAACCTCTGTTGAATTTATTATTGTTCTTGGTACCCTTTCTGATGTCAGTGGGGTCTCTTTGCTTATTAGTCCATGTGGTTACTCTGAGGCTGAAGCTCCCACGGTGCAAATCTGGGCCAGCAATAAAATACACAAGGAAGAAAGGTCATGCATGGGAAAATGGGATGTGCAGTCCATGATCACGTCTTCCTCAGAATATTTCGGACCAGAAAAATTGGTTAGAGAAGATCAATTGCCTAGGCATGTAAAGTTTGCATTTAAGAATCCAGTTCGATGTCACATCATTTGGATAACCTTACGTCTTCAGCGACCTGGTTCCAGTTCTCTAAATTTTGAGAACTTGAATCTGTTGTCTCTTGATGAAAATCCATTTGCAGAAGTAACTCGACGTGCCTCTTTTGGAGGAGCAGTTGAAAGAGAGCCCTGTCTTCATGCAAAAAGGATACTGGTAGTAGGAAGCCCAGTGAAAAAAGATCTAGCACGCACATCTTCACAAGGCTCTGATCAGATGAATATGAAAAGCTGGCTGGAGAGAGATCCACAATTAAATAGATTTAGGGTTCCAATTGAGGCTGAGAGGTTGTTAGATAATGATATAGTCTTGGAACAGTTCCTATCTCCTGCTTCACCTTTGCTTGCTGGGTTTCGTCTTGATGCTTTTGGTGCAATAAAACCTTTGGTTACCCATTCGCCCTCTTCAAATTCACACATATGGGATGTGTCAGCCACACTTTTAGACGAGAGGCACATCTCTCCTGCTGTGCTTTATATACAAGTATCTATTTTCCAGGAACCCCACAACATGGTGACCGTCGCAGAATATAGGTTGCCAGAGGCTAAGCCTGGGACTGCTATGTACTTTGATTTCCCTAGAAAAATACAGACGCGCAGAATTACATTTAAACTTCTTGGAGATGTTACAGCATTTACTGACGACCCAACAGAACAGGATGATCCAGGTTCCAGAGGTCTACAAGTAGCAGCCGGATTGTCATTAGCCAATAGAATTAAGTTGTATTACTATGATGATCCATACGAACTTGGAAAATGGGCAAGCCTTTCAGCAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0031348 GO:0033612 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Syja_N WW

Protein Analysis

1638

Amino Acids

181.28

Weight (kDa)

6.13

Isoelectric Point (pI)

43.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syja_N	PF02383	84 - 391	1.7e-41	SacI homology domain
WW	PF00397	509 - 539	1.1e-11	WW domain
SAC9_GBDL_1st	PF24790	653 - 838	3.2e-97	SAC9 first GBDL domain
SAC9_C8D	PF24791	1065 - 1175	1.3e-20	SAC9 C8D domain
SAC9_GBDL_2nd	PF24789	1235 - 1434	2.7e-99	SAC9 second GBDL domain
SAC9_C	PF24765	1462 - 1637	1.6e-90	SAC9 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59770 AT3G59770 AT3G59770 AT3G59770
fragaria_vesca	FvH4_1g00530 FvH4_1g00530
malus_domestica	MD02G1004400.v1.1 MD15G1148100.v1.1
prunus_persica	Prupe.7G266700_v2.0.a1 Prupe.7G266700_v2.0.a1 Prupe.7G266700_v2.0.a1 Prupe.7G266700_v2.0.a1
pyrus_communis	pycom02g00290 pycom15g13240
rosa_chinensis	RchiOBHm_Chr2g0085161
rosa_laevigata	RLG00000015661
rosa_multiflora	Rmu_sc0008647.1_g000009
rosa_roxburghii	Rroxscaffold_2G00155600
rosa_rugosa	Rorug01G0458000
rosa_samantha	Rh2AG006300 Rh2BG007100 Rh2CG007900 Rh2DG008100
rosa_wichuraiana	Rw2G000600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	915, 3402
Acc65I	GGTACC	1 cut(s)	3872
AccB1I	GGYRCC	1 cut(s)	3872
AccB7I	CCANNNNNTGG	3 cut(s)	1605, 2624, 4645
AccBSI	CCGCTC	1 cut(s)	2959
AccI	GTMKAC	4 cut(s)	350, 1875, 2751, 4813
AccII	CGCG	2 cut(s)	906, 4729
AciI	CCGC	9 cut(s)	395, 401, 826, 829, 904, 2673, 2959, 2981, 3248
AclI	AACGTT	1 cut(s)	3058
AcoI	YGGCCR	1 cut(s)	793
AcsI	RAATTY	9 cut(s)	536, 631, 727, 967, 1134, 1661, 3854, 4171, 4543
AcuI	CTGAAG	8 cut(s)	371, 593, 900, 1269, 2373, 2838, 3954, 4130
AcvI	CACGTG	2 cut(s)	248, 3222
AcyI	GRCGYC	1 cut(s)	3390
AflII	CTTAAG	1 cut(s)	1336
AflIII	ACRYGT	4 cut(s)	813, 2007, 3042, 3221
AhlI	ACTAGT	1 cut(s)	1009
AjiI	CACGTC	2 cut(s)	4026, 4232
AjuI	GAANNNNNNNTTGG	3 cut(s)	29, 1893, 1925
AleI	CACNNNNGTG	1 cut(s)	594
AloI	GAACNNNNNNTCC	2 cut(s)	2397, 2429
Alw21I	GWGCWC	3 cut(s)	139, 236, 2812
Alw26I	GTCTC	7 cut(s)	50, 1266, 1972, 3146, 3294, 3901, 4200
AlwNI	CAGNNNCTG	2 cut(s)	2333, 3584
Ama87I	CYCGRG	1 cut(s)	2455
AoxI	GGCC	6 cut(s)	494, 793, 2297, 2536, 2903, 3957
ApoI	RAATTY	9 cut(s)	536, 631, 727, 967, 1134, 1661, 3854, 4171, 4543
Asp718I	GGTACC	1 cut(s)	3872
AspA2I	CCTAGG	1 cut(s)	4079
AspLEI	GCGC	3 cut(s)	926, 1376, 4731
AspS9I	GGNCC	7 cut(s)	778, 1596, 2297, 2537, 2903, 3957, 4046
AvaI	CYCGRG	1 cut(s)	2455
AvaII	GGWCC	3 cut(s)	778, 1596, 4046
AvrII	CCTAGG	1 cut(s)	4079
AxyI	CCTNAGG	1 cut(s)	643
BalI	TGGCCA	1 cut(s)	795
BamHI	GGATCC	1 cut(s)	638
BanI	GGYRCC	1 cut(s)	3872
BanII	GRGCYC	4 cut(s)	139, 585, 3361, 4266
BarI	GAAGNNNNNNTAC	4 cut(s)	2124, 2156, 3640, 3672
BauI	CACGAG	2 cut(s)	1269, 2421
BbrPI	CACGTG	2 cut(s)	248, 3222
BbsI	GAAGAC	7 cut(s)	2030, 2823, 3129, 3648, 4020, 4136, 4262
Bbv12I	GWGCWC	3 cut(s)	139, 236, 2812
BbvCI	CCTCAGC	1 cut(s)	1778
BccI	CCATC	9 cut(s)	449, 1353, 1945, 1984, 2191, 2837, 3473, 3626, 3692
BceAI	ACGGC	3 cut(s)	226, 3771, 3827
BcgI	CGANNNNNNTGC	4 cut(s)	1591, 1625, 2154, 2188
BciVI	GTATCC	2 cut(s)	1702, 4278
BclI	TGATCA	3 cut(s)	1582, 4020, 4345
BcoDI	GTCTC	7 cut(s)	50, 1266, 1972, 3146, 3294, 3901, 4200
BcuI	ACTAGT	1 cut(s)	1009
BfmI	CTRYAG	4 cut(s)	1236, 1821, 2085, 2748
BfrI	CTTAAG	1 cut(s)	1336
BfuI	GTATCC	2 cut(s)	1702, 4278
BglII	AGATCT	3 cut(s)	1705, 2849, 4315
BlnI	CCTAGG	1 cut(s)	4079
BlpI	GCTNAGC	2 cut(s)	2727, 4680
BmcAI	AGTACT	1 cut(s)	3693
Bme18I	GGWCC	3 cut(s)	778, 1596, 4046
BmeT110I	CYCGRG	1 cut(s)	2455
BmgBI	CACGTC	2 cut(s)	4026, 4232
BmgT120I	GGNCC	7 cut(s)	778, 1596, 2297, 2537, 2903, 3957, 4046
BmrI	ACTGGG	2 cut(s)	2910, 4298
BmuI	ACTGGG	2 cut(s)	2910, 4298
BoxI	GACNNNNGTC	1 cut(s)	3112
BpiI	GAAGAC	7 cut(s)	2030, 2823, 3129, 3648, 4020, 4136, 4262
BpmI	CTGGAG	5 cut(s)	153, 1406, 1671, 2948, 4391
Bpu10I	CCTNAGC	2 cut(s)	1037, 1778
Bpu1102I	GCTNAGC	2 cut(s)	2727, 4680
BpuEI	CTTGAG	2 cut(s)	3170, 3367
Bsa29I	ATCGAT	1 cut(s)	2884
BsaAI	YACGTR	4 cut(s)	248, 816, 2909, 3222
BsaBI	GATNNNNATC	2 cut(s)	2890, 4206
BsaHI	GRCGYC	1 cut(s)	3390
BsaI	GGTCTC	2 cut(s)	3294, 3901
BsaXI	ACNNNNNCTCC	8 cut(s)	330, 360, 1438, 1468, 1532, 1562, 4236, 4266
Bse21I	CCTNAGG	1 cut(s)	643
Bse3DI	GCAATG	2 cut(s)	1445, 3511
Bse8I	GATNNNNATC	2 cut(s)	2890, 4206
BseCI	ATCGAT	1 cut(s)	2884
BseGI	GGATG	8 cut(s)	694, 1558, 1612, 1614, 2669, 4012, 4564, 4798
BseJI	GATNNNNATC	2 cut(s)	2890, 4206
BseMI	GCAATG	2 cut(s)	1445, 3511
BseRI	GAGGAG	6 cut(s)	1308, 3369, 3577, 3783, 3822, 4260
BseYI	CCCAGC	6 cut(s)	503, 1536, 1695, 2868, 3347, 4481
BsgI	GTGCAG	6 cut(s)	876, 2184, 3097, 3573, 3597, 4031
Bsh1236I	CGCG	2 cut(s)	906, 4729
BshFI	GGCC	6 cut(s)	496, 795, 2299, 2538, 2905, 3959
BshNI	GGYRCC	1 cut(s)	3872
BshVI	ATCGAT	1 cut(s)	2884
BsiHKAI	GWGCWC	3 cut(s)	139, 236, 2812
BsiHKCI	CYCGRG	1 cut(s)	2455
BsiSI	CCGG	2 cut(s)	1509, 4827
BslFI	GGGAC	6 cut(s)	355, 497, 764, 1003, 3401, 4702
BsmAI	GTCTC	7 cut(s)	50, 1266, 1972, 3146, 3294, 3901, 4200
BsmFI	GGGAC	6 cut(s)	355, 497, 764, 1003, 3401, 4702
BsmI	GAATGC	3 cut(s)	553, 1292, 3814
BsnI	GGCC	6 cut(s)	496, 795, 2299, 2538, 2905, 3959
Bso31I	GGTCTC	2 cut(s)	3294, 3901
BsoBI	CYCGRG	1 cut(s)	2455
Bsp1286I	GDGCHC	6 cut(s)	139, 236, 585, 2812, 3361, 4266
Bsp1720I	GCTNAGC	2 cut(s)	2727, 4680
Bsp19I	CCATGG	1 cut(s)	3433
BspACI	CCGC	9 cut(s)	395, 401, 826, 829, 904, 2673, 2959, 2981, 3248
BspANI	GGCC	6 cut(s)	496, 795, 2299, 2538, 2905, 3959
BspDI	ATCGAT	1 cut(s)	2884
BspFNI	CGCG	2 cut(s)	906, 4729
BspHI	TCATGA	1 cut(s)	2280
BspMAI	CTGCAG	2 cut(s)	1825, 2089
BspQI	GCTCTTC	1 cut(s)	144
BspT107I	GGYRCC	1 cut(s)	3872
BspTI	CTTAAG	1 cut(s)	1336
BspTNI	GGTCTC	2 cut(s)	3294, 3901
BsrBI	CCGCTC	1 cut(s)	2959
BsrDI	GCAATG	2 cut(s)	1445, 3511
BssNAI	GTATAC	1 cut(s)	351
BssNI	GRCGYC	1 cut(s)	3390
BssSI	CACGAG	2 cut(s)	1269, 2421
BssT1I	CCWWGG	7 cut(s)	1631, 1909, 2494, 2510, 3117, 3433, 4079
Bst1107I	GTATAC	1 cut(s)	351
Bst2BI	CACGAG	2 cut(s)	1269, 2421
Bst6I	CTCTTC	5 cut(s)	144, 1538, 1631, 2511, 4543
BstACI	GRCGYC	1 cut(s)	3390
BstAFI	CTTAAG	1 cut(s)	1336
BstAPI	GCANNNNNTGC	2 cut(s)	3498, 3584
BstBAI	YACGTR	4 cut(s)	248, 816, 2909, 3222
BstDSI	CCRYGG	2 cut(s)	3433, 3942
BstEII	GGTNACC	2 cut(s)	4522, 4648
BstENI	CCTNNNNNAGG	3 cut(s)	15, 336, 915
BstF5I	GGATG	8 cut(s)	694, 1558, 1612, 1614, 2669, 4012, 4564, 4798
BstFNI	CGCG	2 cut(s)	906, 4729
BstHHI	GCGC	3 cut(s)	926, 1376, 4731
BstMAI	GTCTC	7 cut(s)	50, 1266, 1972, 3146, 3294, 3901, 4200
BstMWI	GCNNNNNNNGC	9 cut(s)	513, 674, 881, 2965, 3438, 3498, 3584, 3596, 4505
BstNSI	RCATGY	3 cut(s)	1163, 2011, 4088
BstPAI	GACNNNNGTC	1 cut(s)	3112
BstPI	GGTNACC	2 cut(s)	4522, 4648
BstSFI	CTRYAG	4 cut(s)	1236, 1821, 2085, 2748
BstUI	CGCG	2 cut(s)	906, 4729
BstV2I	GAAGAC	7 cut(s)	2030, 2823, 3129, 3648, 4020, 4136, 4262
BstX2I	RGATCY	7 cut(s)	638, 1340, 1705, 2849, 3668, 4315, 4378
BstXI	CCANNNNNNTGG	4 cut(s)	849, 1352, 1536, 3614
BstYI	RGATCY	7 cut(s)	638, 1340, 1705, 2849, 3668, 4315, 4378
BstZ17I	GTATAC	1 cut(s)	351
Bsu15I	ATCGAT	1 cut(s)	2884
Bsu36I	CCTNAGG	1 cut(s)	643
BsuI	GTATCC	2 cut(s)	1702, 4278
BsuRI	GGCC	6 cut(s)	496, 795, 2299, 2538, 2905, 3959
BsuTUI	ATCGAT	1 cut(s)	2884
BtgI	CCRYGG	2 cut(s)	3433, 3942
BtgZI	GCGATG	2 cut(s)	2954, 3511
BtrI	CACGTC	2 cut(s)	4026, 4232
BtsCI	GGATG	8 cut(s)	694, 1558, 1612, 1614, 2669, 4012, 4564, 4798
BtsI	GCAGTG	1 cut(s)	870
CaiI	CAGNNNCTG	2 cut(s)	2333, 3584
CciI	TCATGA	1 cut(s)	2280
CfoI	GCGC	3 cut(s)	926, 1376, 4731
Cfr13I	GGNCC	7 cut(s)	778, 1596, 2297, 2537, 2903, 3957, 4046
ClaI	ATCGAT	1 cut(s)	2884
CseI	GACGC	4 cut(s)	2217, 3102, 3398, 4735
CsiI	ACCWGGT	2 cut(s)	3606, 4153
DraI	TTTAAA	5 cut(s)	175, 571, 1095, 1810, 4744
EaeI	YGGCCR	1 cut(s)	793
Eam1104I	CTCTTC	5 cut(s)	144, 1538, 1631, 2511, 4543
EarI	CTCTTC	5 cut(s)	144, 1538, 1631, 2511, 4543
Ecl136II	GAGCTC	1 cut(s)	137
Eco130I	CCWWGG	7 cut(s)	1631, 1909, 2494, 2510, 3117, 3433, 4079
Eco24I	GRGCYC	4 cut(s)	139, 585, 3361, 4266
Eco31I	GGTCTC	2 cut(s)	3294, 3901
Eco32I	GATATC	1 cut(s)	3451
Eco47I	GGWCC	3 cut(s)	778, 1596, 4046
Eco53kI	GAGCTC	1 cut(s)	137
Eco57I	CTGAAG	8 cut(s)	371, 593, 900, 1269, 2373, 2838, 3954, 4130
Eco72I	CACGTG	2 cut(s)	248, 3222
Eco81I	CCTNAGG	1 cut(s)	643
Eco88I	CYCGRG	1 cut(s)	2455
Eco91I	GGTNACC	2 cut(s)	4522, 4648
EcoICRI	GAGCTC	1 cut(s)	137
EcoNI	CCTNNNNNAGG	3 cut(s)	15, 336, 915
EcoO109I	RGGNCCY	2 cut(s)	778, 2537
EcoO65I	GGTNACC	2 cut(s)	4522, 4648
EcoRI	GAATTC	3 cut(s)	536, 1134, 1661
EcoRV	GATATC	1 cut(s)	3451
EcoT14I	CCWWGG	7 cut(s)	1631, 1909, 2494, 2510, 3117, 3433, 4079
EcoT22I	ATGCAT	3 cut(s)	1614, 1767, 3995
EcoT38I	GRGCYC	4 cut(s)	139, 585, 3361, 4266
ErhI	CCWWGG	7 cut(s)	1631, 1909, 2494, 2510, 3117, 3433, 4079
FalI	AAGNNNNNCTT	6 cut(s)	452, 484, 2022, 2054, 2391, 2423
FaqI	GGGAC	6 cut(s)	355, 497, 764, 1003, 3401, 4702
FauI	CCCGC	1 cut(s)	822
FauNDI	CATATG	1 cut(s)	4553
FbaI	TGATCA	3 cut(s)	1582, 4020, 4345
FblI	GTMKAC	4 cut(s)	350, 1875, 2751, 4813
FokI	GGATG	8 cut(s)	681, 1565, 1599, 1621, 2656, 4019, 4571, 4805
FriOI	GRGCYC	4 cut(s)	139, 585, 3361, 4266
GlaI	GCGC	3 cut(s)	925, 1375, 4730
GsaI	CCCAGC	6 cut(s)	507, 1540, 1699, 2872, 3351, 4485
GsuI	CTGGAG	5 cut(s)	153, 1406, 1671, 2948, 4391
HaeIII	GGCC	6 cut(s)	496, 795, 2299, 2538, 2905, 3959
HapII	CCGG	2 cut(s)	1509, 4827
HgaI	GACGC	4 cut(s)	2217, 3102, 3398, 4735
HhaI	GCGC	3 cut(s)	926, 1376, 4731
Hin1I	GRCGYC	1 cut(s)	3390
Hin6I	GCGC	3 cut(s)	924, 1374, 4729
HinP1I	GCGC	3 cut(s)	924, 1374, 4729
HincII	GTYRAC	4 cut(s)	309, 945, 2689, 2697
HindII	GTYRAC	4 cut(s)	309, 945, 2689, 2697
HpaII	CCGG	2 cut(s)	1509, 4827
Hpy99I	CGWCG	3 cut(s)	684, 4233, 4658
HpyF10VI	GCNNNNNNNGC	9 cut(s)	513, 674, 881, 2965, 3438, 3498, 3584, 3596, 4505
Hsp92I	GRCGYC	1 cut(s)	3390
HspAI	GCGC	3 cut(s)	924, 1374, 4729
KflI	GGGWCCC	1 cut(s)	778
KpnI	GGTACC	1 cut(s)	3876
Ksp22I	TGATCA	3 cut(s)	1582, 4020, 4345
LguI	GCTCTTC	1 cut(s)	144
MabI	ACCWGGT	2 cut(s)	3606, 4153
MbiI	CCGCTC	1 cut(s)	2959
MfeI	CAATTG	3 cut(s)	1017, 4073, 4407
MflI	RGATCY	7 cut(s)	638, 1340, 1705, 2849, 3668, 4315, 4378
MhlI	GDGCHC	6 cut(s)	139, 236, 585, 2812, 3361, 4266
MlsI	TGGCCA	1 cut(s)	795
MluNI	TGGCCA	1 cut(s)	795
MlyI	GAGTC	3 cut(s)	91, 985, 2165
MmeI	TCCRAC	2 cut(s)	1038, 1530
Mox20I	TGGCCA	1 cut(s)	795
Mph1103I	ATGCAT	3 cut(s)	1614, 1767, 3995
MscI	TGGCCA	1 cut(s)	795
MslI	CAYNNNNRTG	3 cut(s)	594, 1350, 4552
Msp20I	TGGCCA	1 cut(s)	795
MspA1I	CMGCKG	1 cut(s)	2968
MspCI	CTTAAG	1 cut(s)	1336
MspI	CCGG	2 cut(s)	1509, 4827
MssI	GTTTAAAC	1 cut(s)	1810
MunI	CAATTG	3 cut(s)	1017, 4073, 4407
Mva1269I	GAATGC	3 cut(s)	553, 1292, 3814
MvnI	CGCG	2 cut(s)	906, 4729
MwoI	GCNNNNNNNGC	9 cut(s)	513, 674, 881, 2965, 3438, 3498, 3584, 3596, 4505
NcoI	CCATGG	1 cut(s)	3433
NdeI	CATATG	1 cut(s)	4553
NmuCI	GTSAC	6 cut(s)	355, 598, 2762, 3610, 4118, 4648
NsiI	ATGCAT	3 cut(s)	1614, 1767, 3995
NspI	RCATGY	3 cut(s)	1163, 2011, 4088
OliI	CACNNNNGTG	1 cut(s)	594
PaeI	GCATGC	1 cut(s)	1163
PagI	TCATGA	1 cut(s)	2280
PciI	ACATGT	1 cut(s)	2007
PciSI	GCTCTTC	1 cut(s)	144
PcsI	WCGNNNNNNNCGW	3 cut(s)	1598, 3048, 4147
PctI	GAATGC	3 cut(s)	553, 1292, 3814
PflMI	CCANNNNNTGG	3 cut(s)	1605, 2624, 4645
PfoI	TCCNGGA	1 cut(s)	4629
PleI	GAGTC	3 cut(s)	90, 985, 2165
PmaCI	CACGTG	2 cut(s)	248, 3222
PmeI	GTTTAAAC	1 cut(s)	1810
PmlI	CACGTG	2 cut(s)	248, 3222
PpsI	GAGTC	3 cut(s)	90, 985, 2165
Ppu21I	YACGTR	4 cut(s)	248, 816, 2909, 3222
PpuMI	RGGWCCY	1 cut(s)	778
PscI	ACATGT	1 cut(s)	2007
PshAI	GACNNNNGTC	1 cut(s)	3112
PsiI	TTATAA	2 cut(s)	915, 3402
Psp124BI	GAGCTC	1 cut(s)	139
Psp1406I	AACGTT	1 cut(s)	3058
Psp5II	RGGWCCY	1 cut(s)	778
PspCI	CACGTG	2 cut(s)	248, 3222
PspEI	GGTNACC	2 cut(s)	4522, 4648
PspFI	CCCAGC	6 cut(s)	503, 1536, 1695, 2868, 3347, 4481
PspPI	GGNCC	7 cut(s)	778, 1596, 2297, 2537, 2903, 3957, 4046
PspPPI	RGGWCCY	1 cut(s)	778
PstI	CTGCAG	2 cut(s)	1825, 2089
PstNI	CAGNNNCTG	2 cut(s)	2333, 3584
PsuI	RGATCY	7 cut(s)	638, 1340, 1705, 2849, 3668, 4315, 4378
PvuII	CAGCTG	1 cut(s)	2968
RseI	CAYNNNNRTG	3 cut(s)	594, 1350, 4552
SacI	GAGCTC	1 cut(s)	139
SapI	GCTCTTC	1 cut(s)	144
Sau96I	GGNCC	7 cut(s)	778, 1596, 2297, 2537, 2903, 3957, 4046
ScaI	AGTACT	1 cut(s)	3693
SchI	GAGTC	3 cut(s)	91, 985, 2165
SduI	GDGCHC	6 cut(s)	139, 236, 585, 2812, 3361, 4266
SexAI	ACCWGGT	2 cut(s)	3606, 4153
SfcI	CTRYAG	4 cut(s)	1236, 1821, 2085, 2748
SinI	GGWCC	3 cut(s)	778, 1596, 4046
SmiMI	CAYNNNNRTG	3 cut(s)	594, 1350, 4552
SmlI	CTYRAG	3 cut(s)	1336, 3149, 3382
SmoI	CTYRAG	3 cut(s)	1336, 3149, 3382
SpeI	ACTAGT	1 cut(s)	1009
SphI	GCATGC	1 cut(s)	1163
SsiI	CCGC	9 cut(s)	395, 401, 826, 829, 904, 2673, 2959, 2981, 3248
SspI	AATATT	2 cut(s)	2974, 4040
SstI	GAGCTC	1 cut(s)	139
StyI	CCWWGG	7 cut(s)	1631, 1909, 2494, 2510, 3117, 3433, 4079
TaqII	GACCGA	1 cut(s)	374
TatI	WGTACW	6 cut(s)	1072, 1166, 2874, 3691, 3839, 4698
TauI	GCSGC	3 cut(s)	829, 2962, 2984
TseFI	GTSAC	6 cut(s)	355, 598, 2762, 3610, 4118, 4648
Tsp45I	GTSAC	6 cut(s)	355, 598, 2762, 3610, 4118, 4648
TspGWI	ACGGA	1 cut(s)	979
Van91I	CCANNNNNTGG	3 cut(s)	1605, 2624, 4645
Vha464I	CTTAAG	1 cut(s)	1336
VpaK11BI	GGWCC	3 cut(s)	778, 1596, 4046
XagI	CCTNNNNNAGG	3 cut(s)	15, 336, 915
XapI	RAATTY	9 cut(s)	536, 631, 727, 967, 1134, 1661, 3854, 4171, 4543
XceI	RCATGY	3 cut(s)	1163, 2011, 4088
XmaJI	CCTAGG	1 cut(s)	4079
XmiI	GTMKAC	4 cut(s)	350, 1875, 2751, 4813
ZrmI	AGTACT	1 cut(s)	3693
Zsp2I	ATGCAT	3 cut(s)	1614, 1767, 3995

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.