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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G60310 AT3G60310 |
| fragaria_vesca | FvH4_1g07420 |
| malus_domestica | MD02G1079300.v1.1 |
| prunus_persica | Prupe.7G209900_v2.0.a1 |
| pyrus_communis | pycom02g06310 |
| rosa_chinensis | RchiOBHm_Chr2g0093321 |
| rosa_laevigata | RLG00000016390 |
| rosa_multiflora | Rmu_sc0002089.1_g000004 Rmu_sc0005227.1_g000001 Rmu_ssc0000483.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00148190 |
| rosa_rugosa | Rorug02G0034800 |
| rosa_samantha | Rh2AG080900 Rh2BG082000 Rh2CG084200 Rh2DG079900 |
| rosa_wichuraiana | Rw2G006590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 220 |
| AccBSI | CCGCTC | 1 cut(s) | 38 |
| AccI | GTMKAC | 3 cut(s) | 101, 877, 1213 |
| AccII | CGCG | 4 cut(s) | 491, 714, 2056, 2058 |
| AciI | CCGC | 5 cut(s) | 36, 92, 956, 1250, 1356 |
| AclWI | GGATC | 4 cut(s) | 605, 1866, 1931, 1991 |
| AcoI | YGGCCR | 1 cut(s) | 33 |
| AcsI | RAATTY | 3 cut(s) | 1466, 1656, 1706 |
| AcuI | CTGAAG | 2 cut(s) | 38, 384 |
| AfaI | GTAC | 6 cut(s) | 258, 819, 1375, 1684, 1883, 1924 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1286 |
| AflIII | ACRYGT | 1 cut(s) | 467 |
| AjnI | CCWGG | 3 cut(s) | 352, 1021, 1279 |
| Alw21I | GWGCWC | 1 cut(s) | 344 |
| Alw26I | GTCTC | 4 cut(s) | 532, 1320, 1333, 1373 |
| AlwI | GGATC | 4 cut(s) | 605, 1866, 1931, 1991 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1649 |
| AoxI | GGCC | 7 cut(s) | 33, 665, 831, 860, 1540, 1827, 2040 |
| ApeKI | GCWGC | 8 cut(s) | 162, 194, 357, 458, 1247, 1643, 1969, 2030 |
| ApoI | RAATTY | 3 cut(s) | 1466, 1656, 1706 |
| AseI | ATTAAT | 1 cut(s) | 1956 |
| AspLEI | GCGC | 5 cut(s) | 275, 493, 714, 1193, 2058 |
| AspS9I | GGNCC | 1 cut(s) | 959 |
| AsuC2I | CCSGG | 1 cut(s) | 552 |
| AsuHPI | GGTGA | 1 cut(s) | 1474 |
| AsuII | TTCGAA | 2 cut(s) | 75, 438 |
| AvaII | GGWCC | 1 cut(s) | 959 |
| AxyI | CCTNAGG | 1 cut(s) | 225 |
| BanI | GGYRCC | 1 cut(s) | 220 |
| BanII | GRGCYC | 1 cut(s) | 344 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 409, 441 |
| BbsI | GAAGAC | 1 cut(s) | 1458 |
| Bbv12I | GWGCWC | 1 cut(s) | 344 |
| BbvI | GCAGC | 8 cut(s) | 149, 206, 344, 470, 1234, 1655, 1956, 2017 |
| BccI | CCATC | 4 cut(s) | 503, 871, 1534, 1925 |
| BciT130I | CCWGG | 3 cut(s) | 354, 1023, 1281 |
| BciVI | GTATCC | 2 cut(s) | 841, 1033 |
| BcnI | CCSGG | 1 cut(s) | 552 |
| BcoDI | GTCTC | 4 cut(s) | 532, 1320, 1333, 1373 |
| BfaI | CTAG | 6 cut(s) | 119, 731, 762, 890, 1713, 1991 |
| BfmI | CTRYAG | 4 cut(s) | 15, 564, 1210, 1758 |
| BfuI | GTATCC | 2 cut(s) | 841, 1033 |
| BglII | AGATCT | 1 cut(s) | 1234 |
| BmcAI | AGTACT | 2 cut(s) | 819, 1883 |
| Bme1390I | CCNGG | 4 cut(s) | 354, 552, 1023, 1281 |
| Bme18I | GGWCC | 1 cut(s) | 959 |
| BmgT120I | GGNCC | 1 cut(s) | 959 |
| BmiI | GGNNCC | 3 cut(s) | 222, 960, 1291 |
| BmrFI | CCNGG | 4 cut(s) | 354, 552, 1023, 1281 |
| BmrI | ACTGGG | 1 cut(s) | 1659 |
| BmsI | GCATC | 2 cut(s) | 1145, 1531 |
| BmuI | ACTGGG | 1 cut(s) | 1659 |
| BpiI | GAAGAC | 1 cut(s) | 1458 |
| Bpu14I | TTCGAA | 2 cut(s) | 75, 438 |
| BpuMI | CCSGG | 1 cut(s) | 552 |
| BsaBI | GATNNNNATC | 3 cut(s) | 377, 1340, 1935 |
| BsaJI | CCNNGG | 4 cut(s) | 1021, 1022, 1279, 1746 |
| BsaWI | WCCGGW | 1 cut(s) | 1685 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1793, 1823 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1286 |
| Bse1I | ACTGG | 5 cut(s) | 931, 1393, 1440, 1632, 1654 |
| Bse21I | CCTNAGG | 1 cut(s) | 225 |
| Bse3DI | GCAATG | 2 cut(s) | 1242, 1979 |
| Bse8I | GATNNNNATC | 3 cut(s) | 377, 1340, 1935 |
| BseBI | CCWGG | 3 cut(s) | 354, 1023, 1281 |
| BseDI | CCNNGG | 4 cut(s) | 1021, 1022, 1279, 1746 |
| BseGI | GGATG | 2 cut(s) | 514, 1522 |
| BseJI | GATNNNNATC | 3 cut(s) | 377, 1340, 1935 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1286 |
| BseMI | GCAATG | 2 cut(s) | 1242, 1979 |
| BseMII | CTCAG | 9 cut(s) | 239, 578, 935, 979, 1167, 1344, 1368, 1374, 1859 |
| BseNI | ACTGG | 5 cut(s) | 931, 1393, 1440, 1632, 1654 |
| BseRI | GAGGAG | 2 cut(s) | 1631, 1766 |
| BseXI | GCAGC | 8 cut(s) | 149, 206, 344, 470, 1234, 1655, 1956, 2017 |
| Bsh1236I | CGCG | 4 cut(s) | 491, 714, 2056, 2058 |
| BshFI | GGCC | 7 cut(s) | 35, 667, 833, 862, 1542, 1829, 2042 |
| BshNI | GGYRCC | 1 cut(s) | 220 |
| BsiHKAI | GWGCWC | 1 cut(s) | 344 |
| BsiSI | CCGG | 2 cut(s) | 551, 1686 |
| BslFI | GGGAC | 4 cut(s) | 129, 810, 961, 1004 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1286 |
| BsmAI | GTCTC | 4 cut(s) | 532, 1320, 1333, 1373 |
| BsmFI | GGGAC | 4 cut(s) | 129, 810, 961, 1004 |
| BsnI | GGCC | 7 cut(s) | 35, 667, 833, 862, 1542, 1829, 2042 |
| Bsp119I | TTCGAA | 2 cut(s) | 75, 438 |
| Bsp1286I | GDGCHC | 1 cut(s) | 344 |
| Bsp1407I | TGTACA | 1 cut(s) | 1922 |
| BspACI | CCGC | 5 cut(s) | 36, 92, 956, 1250, 1356 |
| BspANI | GGCC | 7 cut(s) | 35, 667, 833, 862, 1542, 1829, 2042 |
| BspCNI | CTCAG | 9 cut(s) | 238, 579, 936, 978, 1166, 1343, 1369, 1373, 1860 |
| BspFNI | CGCG | 4 cut(s) | 491, 714, 2056, 2058 |
| BspLI | GGNNCC | 3 cut(s) | 222, 960, 1291 |
| BspMAI | CTGCAG | 1 cut(s) | 19 |
| BspPI | GGATC | 4 cut(s) | 605, 1866, 1931, 1991 |
| BspQI | GCTCTTC | 1 cut(s) | 1154 |
| BspT104I | TTCGAA | 2 cut(s) | 75, 438 |
| BspT107I | GGYRCC | 1 cut(s) | 220 |
| BsrBI | CCGCTC | 1 cut(s) | 38 |
| BsrDI | GCAATG | 2 cut(s) | 1242, 1979 |
| BsrGI | TGTACA | 1 cut(s) | 1922 |
| BsrI | ACTGG | 5 cut(s) | 931, 1393, 1440, 1632, 1654 |
| BssECI | CCNNGG | 4 cut(s) | 1021, 1022, 1279, 1746 |
| BssNAI | GTATAC | 1 cut(s) | 878 |
| BssT1I | CCWWGG | 1 cut(s) | 1746 |
| Bst1107I | GTATAC | 1 cut(s) | 878 |
| Bst2UI | CCWGG | 3 cut(s) | 354, 1023, 1281 |
| Bst4CI | ACNGT | 7 cut(s) | 333, 405, 1000, 1211, 1731, 1922, 1981 |
| Bst6I | CTCTTC | 3 cut(s) | 90, 1154, 1561 |
| BstAUI | TGTACA | 1 cut(s) | 1922 |
| BstBI | TTCGAA | 2 cut(s) | 75, 438 |
| BstC8I | GCNNGC | 1 cut(s) | 2044 |
| BstF5I | GGATG | 2 cut(s) | 514, 1522 |
| BstFNI | CGCG | 4 cut(s) | 491, 714, 2056, 2058 |
| BstHHI | GCGC | 5 cut(s) | 275, 493, 714, 1193, 2058 |
| BstMAI | GTCTC | 4 cut(s) | 532, 1320, 1333, 1373 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 41, 499, 830, 1902, 2039 |
| BstNI | CCWGG | 3 cut(s) | 354, 1023, 1281 |
| BstNSI | RCATGY | 1 cut(s) | 471 |
| BstSCI | CCNGG | 4 cut(s) | 352, 550, 1021, 1279 |
| BstSFI | CTRYAG | 4 cut(s) | 15, 564, 1210, 1758 |
| BstUI | CGCG | 4 cut(s) | 491, 714, 2056, 2058 |
| BstV1I | GCAGC | 8 cut(s) | 149, 206, 344, 470, 1234, 1655, 1956, 2017 |
| BstV2I | GAAGAC | 1 cut(s) | 1458 |
| BstX2I | RGATCY | 5 cut(s) | 610, 1234, 1871, 1936, 1996 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 870, 1447 |
| BstYI | RGATCY | 5 cut(s) | 610, 1234, 1871, 1936, 1996 |
| BstZ17I | GTATAC | 1 cut(s) | 878 |
| Bsu36I | CCTNAGG | 1 cut(s) | 225 |
| BsuI | GTATCC | 2 cut(s) | 841, 1033 |
| BsuRI | GGCC | 7 cut(s) | 35, 667, 833, 862, 1542, 1829, 2042 |
| BtsCI | GGATG | 2 cut(s) | 514, 1522 |
| BtsIMutI | CAGTG | 2 cut(s) | 938, 1918 |
| Cac8I | GCNNGC | 1 cut(s) | 2044 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1649 |
| CfoI | GCGC | 5 cut(s) | 275, 493, 714, 1193, 2058 |
| Cfr13I | GGNCC | 1 cut(s) | 959 |
| CseI | GACGC | 3 cut(s) | 200, 999, 1847 |
| Csp6I | GTAC | 6 cut(s) | 257, 818, 1374, 1683, 1882, 1923 |
| CviAII | CATG | 3 cut(s) | 468, 494, 898 |
| CviQI | GTAC | 6 cut(s) | 257, 818, 1374, 1683, 1882, 1923 |
| EaeI | YGGCCR | 1 cut(s) | 33 |
| Eam1104I | CTCTTC | 3 cut(s) | 90, 1154, 1561 |
| EarI | CTCTTC | 3 cut(s) | 90, 1154, 1561 |
| Ecl136II | GAGCTC | 1 cut(s) | 342 |
| Eco130I | CCWWGG | 1 cut(s) | 1746 |
| Eco147I | AGGCCT | 1 cut(s) | 667 |
| Eco24I | GRGCYC | 1 cut(s) | 344 |
| Eco32I | GATATC | 3 cut(s) | 157, 738, 2026 |
| Eco47I | GGWCC | 1 cut(s) | 959 |
| Eco53kI | GAGCTC | 1 cut(s) | 342 |
| Eco57I | CTGAAG | 2 cut(s) | 38, 384 |
| Eco81I | CCTNAGG | 1 cut(s) | 225 |
| EcoICRI | GAGCTC | 1 cut(s) | 342 |
| EcoO109I | RGGNCCY | 1 cut(s) | 959 |
| EcoRII | CCWGG | 3 cut(s) | 352, 1021, 1279 |
| EcoRV | GATATC | 3 cut(s) | 157, 738, 2026 |
| EcoT14I | CCWWGG | 1 cut(s) | 1746 |
| EcoT22I | ATGCAT | 1 cut(s) | 1898 |
| EcoT38I | GRGCYC | 1 cut(s) | 344 |
| ErhI | CCWWGG | 1 cut(s) | 1746 |
| FaeI | CATG | 3 cut(s) | 471, 497, 901 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1755, 1787 |
| FaqI | GGGAC | 4 cut(s) | 129, 810, 961, 1004 |
| FatI | CATG | 3 cut(s) | 467, 493, 897 |
| FauI | CCCGC | 1 cut(s) | 949 |
| FblI | GTMKAC | 3 cut(s) | 101, 877, 1213 |
| FokI | GGATG | 2 cut(s) | 521, 1509 |
| FriOI | GRGCYC | 1 cut(s) | 344 |
| FspBI | CTAG | 6 cut(s) | 119, 731, 762, 890, 1713, 1991 |
| GlaI | GCGC | 5 cut(s) | 274, 492, 713, 1192, 2057 |
| HaeIII | GGCC | 7 cut(s) | 35, 667, 833, 862, 1542, 1829, 2042 |
| HapII | CCGG | 2 cut(s) | 551, 1686 |
| HgaI | GACGC | 3 cut(s) | 200, 999, 1847 |
| HhaI | GCGC | 5 cut(s) | 275, 493, 714, 1193, 2058 |
| Hin1II | CATG | 3 cut(s) | 471, 497, 901 |
| Hin6I | GCGC | 5 cut(s) | 273, 491, 712, 1191, 2056 |
| HinP1I | GCGC | 5 cut(s) | 273, 491, 712, 1191, 2056 |
| HindIII | AAGCTT | 2 cut(s) | 500, 533 |
| HpaII | CCGG | 2 cut(s) | 551, 1686 |
| HphI | GGTGA | 1 cut(s) | 1474 |
| Hpy166II | GTNNAC | 5 cut(s) | 102, 190, 878, 1214, 1925 |
| Hpy8I | GTNNAC | 5 cut(s) | 102, 190, 878, 1214, 1925 |
| HpyAV | CCTTC | 3 cut(s) | 619, 1151, 1757 |
| HpyCH4III | ACNGT | 7 cut(s) | 333, 405, 1000, 1211, 1731, 1922, 1981 |
| HpyCH4V | TGCA | 7 cut(s) | 17, 839, 1136, 1643, 1896, 1972, 2046 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 41, 499, 830, 1902, 2039 |
| Hsp92II | CATG | 3 cut(s) | 471, 497, 901 |
| HspAI | GCGC | 5 cut(s) | 273, 491, 712, 1191, 2056 |
| LguI | GCTCTTC | 1 cut(s) | 1154 |
| LmnI | GCTCC | 4 cut(s) | 130, 339, 347, 688 |
| Lsp1109I | GCAGC | 8 cut(s) | 149, 206, 344, 470, 1234, 1655, 1956, 2017 |
| LweI | GCATC | 2 cut(s) | 1145, 1531 |
| MaeI | CTAG | 6 cut(s) | 119, 731, 762, 890, 1713, 1991 |
| MaeIII | GTNAC | 2 cut(s) | 1606, 1949 |
| MbiI | CCGCTC | 1 cut(s) | 38 |
| MfeI | CAATTG | 3 cut(s) | 243, 264, 292 |
| MflI | RGATCY | 5 cut(s) | 610, 1234, 1871, 1936, 1996 |
| MhlI | GDGCHC | 1 cut(s) | 344 |
| MlyI | GAGTC | 4 cut(s) | 107, 142, 1310, 1335 |
| Mph1103I | ATGCAT | 1 cut(s) | 1898 |
| MseI | TTAA | 8 cut(s) | 135, 1110, 1668, 1787, 1854, 1863, 1956, 2007 |
| MslI | CAYNNNNRTG | 1 cut(s) | 868 |
| MspI | CCGG | 2 cut(s) | 551, 1686 |
| MspR9I | CCNGG | 4 cut(s) | 354, 552, 1023, 1281 |
| MunI | CAATTG | 3 cut(s) | 243, 264, 292 |
| MvaI | CCWGG | 3 cut(s) | 354, 1023, 1281 |
| MvnI | CGCG | 4 cut(s) | 491, 714, 2056, 2058 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 41, 499, 830, 1902, 2039 |
| NciI | CCSGG | 1 cut(s) | 552 |
| NlaIII | CATG | 3 cut(s) | 471, 497, 901 |
| NlaIV | GGNNCC | 3 cut(s) | 222, 960, 1291 |
| NmuCI | GTSAC | 1 cut(s) | 1949 |
| NsiI | ATGCAT | 1 cut(s) | 1898 |
| NspI | RCATGY | 1 cut(s) | 471 |
| NspV | TTCGAA | 2 cut(s) | 75, 438 |
| PasI | CCCWGGG | 1 cut(s) | 1022 |
| PceI | AGGCCT | 1 cut(s) | 667 |
| PciI | ACATGT | 1 cut(s) | 467 |
| PciSI | GCTCTTC | 1 cut(s) | 1154 |
| PfeI | GAWTC | 9 cut(s) | 170, 236, 557, 592, 642, 948, 1270, 1508, 1689 |
| PleI | GAGTC | 4 cut(s) | 106, 142, 1309, 1334 |
| PpsI | GAGTC | 4 cut(s) | 106, 142, 1309, 1334 |
| PpuMI | RGGWCCY | 1 cut(s) | 959 |
| PscI | ACATGT | 1 cut(s) | 467 |
| PshBI | ATTAAT | 1 cut(s) | 1956 |
| Psp124BI | GAGCTC | 1 cut(s) | 344 |
| Psp5II | RGGWCCY | 1 cut(s) | 959 |
| Psp6I | CCWGG | 3 cut(s) | 352, 1021, 1279 |
| PspGI | CCWGG | 3 cut(s) | 352, 1021, 1279 |
| PspN4I | GGNNCC | 3 cut(s) | 222, 960, 1291 |
| PspPI | GGNCC | 1 cut(s) | 959 |
| PspPPI | RGGWCCY | 1 cut(s) | 959 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1617, 1649 |
| PstI | CTGCAG | 1 cut(s) | 19 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1649 |
| PsuI | RGATCY | 5 cut(s) | 610, 1234, 1871, 1936, 1996 |
| RsaI | GTAC | 6 cut(s) | 258, 819, 1375, 1684, 1883, 1924 |
| RsaNI | GTAC | 6 cut(s) | 257, 818, 1374, 1683, 1882, 1923 |
| RseI | CAYNNNNRTG | 1 cut(s) | 868 |
| SacI | GAGCTC | 1 cut(s) | 344 |
| SapI | GCTCTTC | 1 cut(s) | 1154 |
| SaqAI | TTAA | 8 cut(s) | 135, 1110, 1668, 1787, 1854, 1863, 1956, 2007 |
| Sau96I | GGNCC | 1 cut(s) | 959 |
| ScaI | AGTACT | 2 cut(s) | 819, 1883 |
| SchI | GAGTC | 4 cut(s) | 107, 142, 1310, 1335 |
| ScrFI | CCNGG | 4 cut(s) | 354, 552, 1023, 1281 |
| SduI | GDGCHC | 1 cut(s) | 344 |
| SfaNI | GCATC | 2 cut(s) | 1145, 1531 |
| SfcI | CTRYAG | 4 cut(s) | 15, 564, 1210, 1758 |
| SfuI | TTCGAA | 2 cut(s) | 75, 438 |
| SinI | GGWCC | 1 cut(s) | 959 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 868 |
| SseBI | AGGCCT | 1 cut(s) | 667 |
| SsiI | CCGC | 5 cut(s) | 36, 92, 956, 1250, 1356 |
| SspMI | CTAG | 6 cut(s) | 119, 731, 762, 890, 1713, 1991 |
| SstI | GAGCTC | 1 cut(s) | 344 |
| StuI | AGGCCT | 1 cut(s) | 667 |
| StyD4I | CCNGG | 4 cut(s) | 352, 550, 1021, 1279 |
| StyI | CCWWGG | 1 cut(s) | 1746 |
| TaaI | ACNGT | 7 cut(s) | 333, 405, 1000, 1211, 1731, 1922, 1981 |
| TaqI | TCGA | 8 cut(s) | 75, 313, 375, 438, 530, 607, 696, 1733 |
| TatI | WGTACW | 3 cut(s) | 817, 1881, 1922 |
| TauI | GCSGC | 3 cut(s) | 38, 1253, 1359 |
| TfiI | GAWTC | 9 cut(s) | 170, 236, 557, 592, 642, 948, 1270, 1508, 1689 |
| Tru1I | TTAA | 8 cut(s) | 135, 1110, 1668, 1787, 1854, 1863, 1956, 2007 |
| Tru9I | TTAA | 8 cut(s) | 135, 1110, 1668, 1787, 1854, 1863, 1956, 2007 |
| TscAI | CASTG | 2 cut(s) | 938, 1925 |
| TseFI | GTSAC | 1 cut(s) | 1949 |
| TseI | GCWGC | 8 cut(s) | 162, 194, 357, 458, 1247, 1643, 1969, 2030 |
| Tsp45I | GTSAC | 1 cut(s) | 1949 |
| TspDTI | ATGAA | 3 cut(s) | 81, 1638, 1752 |
| TspGWI | ACGGA | 2 cut(s) | 75, 1693 |
| TspRI | CASTG | 2 cut(s) | 938, 1925 |
| VpaK11BI | GGWCC | 1 cut(s) | 959 |
| VspI | ATTAAT | 1 cut(s) | 1956 |
| XapI | RAATTY | 3 cut(s) | 1466, 1656, 1706 |
| XbaI | TCTAGA | 1 cut(s) | 1712 |
| XceI | RCATGY | 1 cut(s) | 471 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1882 |
| XmiI | GTMKAC | 3 cut(s) | 101, 877, 1213 |
| XspI | CTAG | 6 cut(s) | 119, 731, 762, 890, 1713, 1991 |
| ZrmI | AGTACT | 2 cut(s) | 819, 1883 |
| Zsp2I | ATGCAT | 1 cut(s) | 1898 |