Rroxscaffold_2G00148190

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0012985
Physical Location & Seq
Forward (+)
85846826 .. 85849505
2680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00148190.1

Sequence Viewer

Length: 1995 bp
ATGACCACCGTGCCGGAATTGACCGATCTCTTCGCCCGGCTCGCTTCCCACTTAAACGACACGTCGTTGCCTCATCGCACTACCCAGGAAGAACAAGACGAAGCTGCTCTGGACCTATCCATTTCCAATCTGAACCAATCCCTAAACCTCAGCGACCATTCTAGGGTTAGGGTTTTGGACGCCGTCCTATCTCTGATGTGCTTCAAAGCACCCCAGGTTTATGATTCGGTGATTGAGTATTCGGTGAAGACAATTGTCACTGTTTTGTTGTCGTCGATTCGTTGCGACGTCTTTCGGTCTCCGAAAGATGAAGTCTTGATGATCGGGAGCTCTATTTCTCACCGAGATTGCGCTAATTTGATCGAGTCGTGTGCTGAGATTCTTGGCAAATTGGAGGGACATGTTAAGCTTTCGGAGTCTTTACTGTGCGCCATTGTAAGAGTTGTGAGTTCGGCATCTCTGTACCGGCAGCTGTCAACGCCCATTCGTGATGTGAAATCAGTGGATGCGAGGAATAGCTTGATTTCAAAGCTGCTATGTCATTTGCCTACAGCAACCTTGCTTGATAACAACAAAATATCTCTCAGATTGCTGGTCTGGTATCTTGATCCACTAGTTTTGAAGCGCGATGTTTCAAACATCTTGCAAGAAGCCATGAGGAGGCCATTCCTTTGTTTGAGTAAGGAGTTTCATGAGAGTACTGAGGGTTTAGCTTCTGTGCTTGAGCTTCTAATTCAATTGGTCTCAGTGACATTAGATGTGGTTTTGAGACCCATGTTCTGGGACATATCAGCAGAATTGGGAGGAAGGTTACCATTTTCTAATGCTTATTTTCCTTACAACCACCAGTTGTTAAGGAACTTGGCTGGACCCCTCTCTTATGATGATTTCCTACAATTAGTGCGCCAGACAAGTGAACCAGTACCTTCTTCCAAAACTCAACTTTATCCATCTATTAAGTCACCTATACTGAAGGTTGCGACAGTCGATCACAAATCTGTCTGGTCTCTGGCCATCAACTTCCCAGATTGGTTCTACTTCGCTTCTGCATTGCTCTTCTCGGGGAAAGGTTCCCTCGACATTTGTCATAAACTATGCTTATTGGCAGCATCCAAAGTTGGGAAAACACATTATGAAGAACTACCTTCTATTGCTGCAGCAAGGTACATTGCCTGGATTTTGAGTCCTGTTAGTAAATCTCACCAGGATAGGCTGGCTGATTGTTTGATTAAACATTCAGAGTCCCCGGCTTTTAAGCAGTCACATGACAAAGAAACATTCTACAAGAAGAAACTCAAGAAACTCAAACTCTGTGAAGAGGACCATACTTCCACAAGAGAGTATGATGATCAAAGCATTGCAGTCTGGCTCAATGGATTCAACAATATATGCACAATGTACTGTAGTGAAACTGTTAACAATTGTACATCATCTGAAACAAAACCATCCGGTGGTCTTAGTCTGCAGAAAAATGTCTTGTTCCGGAGAATCCCACTAGGTATCTTGCTTTGTTACCCCAGTCATCTCAATGAAGATGGATTAGAACTGCTGCTGCATTATGCCACCACGGGTAGAATTTTTCAGTCAAGGGAAACTAAGATTCCCGGATTGAAGCATGTAAAATGGAACTCCAGAGGGAATAAGAACCCAATTACATGGAGTGATGAATGTAATGAAAAAGAGGTTGTAGCAGGAGCCTTTCTTGTCTTCAGCTTAACCGATATTGTTGAAAGCATGTGTTCTTCACTGTTTGAGACTGAAGAGGCTAGCAGAGACTTTATTTGCTGGGTGAAAATGCAGGTCGGCAAATACTTGATAAAATGCATCAAGAGGTTCATTCAACTCAAAGTTGATGATGAAGATGTGGTGGTGATGGATCTCTGCCATAGATTGGAGCAGTGGAGCCATCAAGGACGGGTAGTATTAGAGCTCCAGAATGATCTTGATAATGTCATTCAAGTCATTAATCAGAGATTTGCTTTTTGTGTTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

664

Amino Acids

75.08

Weight (kDa)

6.48

Isoelectric Point (pI)

47.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012985)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G60310 AT3G60310
fragaria_vesca FvH4_1g07420
malus_domestica MD02G1079300.v1.1
prunus_persica Prupe.7G209900_v2.0.a1
pyrus_communis pycom02g06310
rosa_chinensis RchiOBHm_Chr2g0093321
rosa_laevigata RLG00000016390
rosa_multiflora Rmu_sc0002089.1_g000004 Rmu_sc0005227.1_g000001 Rmu_ssc0000483.1_g000001
rosa_roxburghii Rroxscaffold_2G00148190
rosa_rugosa Rorug02G0034800
rosa_samantha Rh2AG080900 Rh2BG082000 Rh2CG084200 Rh2DG079900
rosa_wichuraiana Rw2G006590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 291
Acc36I ACCTGC 1 cut(s) 1789
AccB7I CCANNNNNTGG 3 cut(s) 780, 1451, 1891
AccII CGCG 1 cut(s) 627
AccIII TCCGGA 1 cut(s) 1482
AclWI GGATC 2 cut(s) 602, 1884
AcoI YGGCCR 1 cut(s) 1011
AcsI RAATTY 1 cut(s) 1575
AcuI CTGAAG 3 cut(s) 992, 1693, 1779
AcyI GRCGYC 2 cut(s) 180, 288
AfaI GTAC 6 cut(s) 464, 700, 924, 1166, 1400, 1426
AfiI CCNNNNNNNGG 6 cut(s) 163, 660, 780, 1119, 1451, 1891
AflIII ACRYGT 2 cut(s) 60, 400
AhlI ACTAGT 1 cut(s) 613
AjiI CACGTC 1 cut(s) 63
AjnI CCWGG 4 cut(s) 84, 213, 1172, 1203
Alw21I GWGCWC 2 cut(s) 332, 1932
Alw26I GTCTC 6 cut(s) 303, 748, 763, 1011, 1748, 1767
AlwI GGATC 2 cut(s) 602, 1884
Ama87I CYCGRG 1 cut(s) 1060
Aor13HI TCCGGA 1 cut(s) 1482
AoxI GGCC 2 cut(s) 662, 1011
ApeKI GCWGC 8 cut(s) 104, 469, 532, 1106, 1154, 1157, 1549, 1552
ApoI RAATTY 1 cut(s) 1575
AseI ATTAAT 1 cut(s) 1965
AspLEI GCGC 4 cut(s) 353, 431, 627, 906
AspS9I GGNCC 3 cut(s) 112, 869, 1321
AsuC2I CCSGG 3 cut(s) 37, 1247, 1605
AsuHPI GGTGA 7 cut(s) 241, 256, 332, 954, 1193, 1801, 1882
AsuNHI GCTAGC 1 cut(s) 1766
AvaI CYCGRG 1 cut(s) 1060
AvaII GGWCC 3 cut(s) 112, 869, 1321
BalI TGGCCA 1 cut(s) 1013
BanII GRGCYC 2 cut(s) 332, 1932
BbsI GAAGAC 2 cut(s) 254, 1699
Bbv12I GWGCWC 2 cut(s) 332, 1932
BbvCI CCTCAGC 1 cut(s) 149
BbvI GCAGC 8 cut(s) 91, 481, 519, 1118, 1141, 1169, 1536, 1539
BccI CCATC 6 cut(s) 958, 1022, 1453, 1529, 1867, 1914
BceAI ACGGC 1 cut(s) 167
BcgI CGANNNNNNTGC 2 cut(s) 353, 387
BciT130I CCWGG 4 cut(s) 86, 215, 1174, 1205
BclI TGATCA 1 cut(s) 1348
BcnI CCSGG 3 cut(s) 37, 1247, 1605
BcoDI GTCTC 6 cut(s) 303, 748, 763, 1011, 1748, 1767
BcuI ACTAGT 1 cut(s) 613
BfaI CTAG 4 cut(s) 162, 614, 1496, 1767
BfmI CTRYAG 4 cut(s) 549, 1155, 1402, 1463
BfuAI ACCTGC 1 cut(s) 1789
BisI GCNGC 8 cut(s) 105, 470, 533, 1107, 1155, 1158, 1550, 1553
BlsI GCNGC 8 cut(s) 106, 471, 534, 1108, 1156, 1159, 1551, 1554
BmcAI AGTACT 1 cut(s) 700
Bme1390I CCNGG 7 cut(s) 37, 86, 215, 1174, 1205, 1247, 1605
Bme18I GGWCC 3 cut(s) 112, 869, 1321
BmeT110I CYCGRG 1 cut(s) 1060
BmgBI CACGTC 1 cut(s) 63
BmgT120I GGNCC 3 cut(s) 112, 869, 1321
BmiI GGNNCC 4 cut(s) 871, 1072, 1696, 1904
BmrFI CCNGG 7 cut(s) 37, 86, 215, 1174, 1205, 1247, 1605
BmrI ACTGGG 1 cut(s) 1512
BmsI GCATC 4 cut(s) 464, 496, 1118, 1833
BmtI GCTAGC 1 cut(s) 1770
BmuI ACTGGG 1 cut(s) 1512
BoxI GACNNNNGTC 2 cut(s) 254, 1083
BpiI GAAGAC 2 cut(s) 254, 1699
BpmI CTGGAG 2 cut(s) 1615, 1916
Bpu10I CCTNAGC 1 cut(s) 149
BpuEI CTTGAG 2 cut(s) 743, 1280
BpuMI CCSGG 3 cut(s) 37, 1247, 1605
BsaHI GRCGYC 2 cut(s) 180, 288
BsaI GGTCTC 4 cut(s) 303, 748, 763, 1011
BsaJI CCNNGG 4 cut(s) 84, 213, 1245, 1566
BsaWI WCCGGW 2 cut(s) 1448, 1482
Bsc4I CCNNNNNNNGG 6 cut(s) 163, 660, 780, 1119, 1451, 1891
Bse118I RCCGGY 1 cut(s) 465
Bse1I ACTGG 3 cut(s) 847, 920, 1518
Bse3DI GCAATG 3 cut(s) 1049, 1167, 1356
BseAI TCCGGA 1 cut(s) 1482
BseBI CCWGG 4 cut(s) 86, 215, 1174, 1205
BseDI CCNNGG 4 cut(s) 84, 213, 1245, 1566
BseGI GGATG 3 cut(s) 511, 1109, 1445
BseLI CCNNNNNNNGG 6 cut(s) 163, 660, 780, 1119, 1451, 1891
BseMI GCAATG 3 cut(s) 1049, 1167, 1356
BseMII CTCAG 5 cut(s) 163, 366, 598, 693, 759
BseNI ACTGG 3 cut(s) 847, 920, 1518
BseRI GAGGAG 1 cut(s) 673
BseXI GCAGC 8 cut(s) 91, 481, 519, 1118, 1141, 1169, 1536, 1539
BseYI CCCAGC 1 cut(s) 1785
Bsh1236I CGCG 1 cut(s) 627
BshFI GGCC 2 cut(s) 664, 1013
BsiHKAI GWGCWC 2 cut(s) 332, 1932
BsiHKCI CYCGRG 1 cut(s) 1060
BsiSI CCGG 7 cut(s) 14, 37, 466, 1247, 1449, 1483, 1605
BslFI GGGAC 3 cut(s) 411, 797, 1228
BslI CCNNNNNNNGG 6 cut(s) 163, 660, 780, 1119, 1451, 1891
BsmAI GTCTC 6 cut(s) 303, 748, 763, 1011, 1748, 1767
BsmFI GGGAC 3 cut(s) 411, 797, 1228
BsnI GGCC 2 cut(s) 664, 1013
Bso31I GGTCTC 4 cut(s) 303, 748, 763, 1011
BsoBI CYCGRG 1 cut(s) 1060
Bsp1286I GDGCHC 2 cut(s) 332, 1932
Bsp13I TCCGGA 1 cut(s) 1482
Bsp1407I TGTACA 1 cut(s) 1424
Bsp143I GATC 8 cut(s) 25, 321, 360, 607, 988, 1348, 1876, 1939
BspANI GGCC 2 cut(s) 664, 1013
BspCNI CTCAG 5 cut(s) 162, 367, 597, 694, 758
BspEI TCCGGA 1 cut(s) 1482
BspFNI CGCG 1 cut(s) 627
BspHI TCATGA 2 cut(s) 691, 1991
BspLI GGNNCC 4 cut(s) 871, 1072, 1696, 1904
BspMAI CTGCAG 2 cut(s) 1159, 1467
BspMI ACCTGC 1 cut(s) 1789
BspOI GCTAGC 1 cut(s) 1770
BspPI GGATC 2 cut(s) 602, 1884
BspQI GCTCTTC 1 cut(s) 1061
BspTNI GGTCTC 4 cut(s) 303, 748, 763, 1011
BsrDI GCAATG 3 cut(s) 1049, 1167, 1356
BsrFI RCCGGY 1 cut(s) 465
BsrGI TGTACA 1 cut(s) 1424
BsrI ACTGG 3 cut(s) 847, 920, 1518
BssAI RCCGGY 1 cut(s) 465
BssECI CCNNGG 4 cut(s) 84, 213, 1245, 1566
BssMI GATC 8 cut(s) 25, 321, 360, 607, 988, 1348, 1876, 1939
BssNI GRCGYC 2 cut(s) 180, 288
Bst2UI CCWGG 4 cut(s) 86, 215, 1174, 1205
Bst4CI ACNGT 7 cut(s) 10, 262, 426, 985, 1403, 1414, 1749
Bst6I CTCTTC 4 cut(s) 35, 1061, 1311, 1755
BstACI GRCGYC 2 cut(s) 180, 288
BstAUI TGTACA 1 cut(s) 1424
BstC8I GCNNGC 3 cut(s) 42, 1215, 1768
BstDEI CTNAG 7 cut(s) 149, 375, 584, 702, 745, 1457, 1596
BstDSI CCRYGG 1 cut(s) 1566
BstEII GGTNACC 1 cut(s) 810
BstF5I GGATG 3 cut(s) 511, 1109, 1445
BstFNI CGCG 1 cut(s) 627
BstHHI GCGC 4 cut(s) 353, 431, 627, 906
BstKTI GATC 8 cut(s) 28, 324, 363, 610, 991, 1351, 1879, 1942
BstMAI GTCTC 6 cut(s) 303, 748, 763, 1011, 1748, 1767
BstMBI GATC 8 cut(s) 25, 321, 360, 607, 988, 1348, 1876, 1939
BstMWI GCNNNNNNNGC 2 cut(s) 41, 478
BstNI CCWGG 4 cut(s) 86, 215, 1174, 1205
BstNSI RCATGY 3 cut(s) 404, 1619, 1738
BstPAI GACNNNNGTC 2 cut(s) 254, 1083
BstPI GGTNACC 1 cut(s) 810
BstSCI CCNGG 7 cut(s) 35, 84, 213, 1172, 1203, 1245, 1603
BstSFI CTRYAG 4 cut(s) 549, 1155, 1402, 1463
BstUI CGCG 1 cut(s) 627
BstV1I GCAGC 8 cut(s) 91, 481, 519, 1118, 1141, 1169, 1536, 1539
BstV2I GAAGAC 2 cut(s) 254, 1699
BstX2I RGATCY 1 cut(s) 1876
BstXI CCANNNNNNTGG 1 cut(s) 1656
BstYI RGATCY 1 cut(s) 1876
BsuRI GGCC 2 cut(s) 664, 1013
BtgI CCRYGG 1 cut(s) 1566
BtgZI GCGATG 2 cut(s) 59, 642
BtrI CACGTC 1 cut(s) 63
BtsCI GGATG 3 cut(s) 511, 1109, 1445
BtsI GCAGTG 1 cut(s) 1904
BtsIMutI CAGTG 5 cut(s) 258, 507, 753, 1745, 1904
BveI ACCTGC 1 cut(s) 1789
Cac8I GCNNGC 3 cut(s) 42, 1215, 1768
CciI TCATGA 2 cut(s) 691, 1991
CfoI GCGC 4 cut(s) 353, 431, 627, 906
Cfr10I RCCGGY 1 cut(s) 465
Cfr13I GGNCC 3 cut(s) 112, 869, 1321
CseI GACGC 1 cut(s) 188
Csp6I GTAC 6 cut(s) 463, 699, 923, 1165, 1399, 1425
CspCI CAANNNNNGTGG 2 cut(s) 600, 635
CviAII CATG 9 cut(s) 401, 655, 692, 775, 1265, 1616, 1656, 1735, 1992
CviQI GTAC 6 cut(s) 463, 699, 923, 1165, 1399, 1425
DdeI CTNAG 7 cut(s) 149, 375, 584, 702, 745, 1457, 1596
DpnI GATC 8 cut(s) 27, 323, 362, 609, 990, 1350, 1878, 1941
DpnII GATC 8 cut(s) 25, 321, 360, 607, 988, 1348, 1876, 1939
EaeI YGGCCR 1 cut(s) 1011
Eam1104I CTCTTC 4 cut(s) 35, 1061, 1311, 1755
EarI CTCTTC 4 cut(s) 35, 1061, 1311, 1755
Ecl136II GAGCTC 2 cut(s) 330, 1930
Eco24I GRGCYC 2 cut(s) 332, 1932
Eco31I GGTCTC 4 cut(s) 303, 748, 763, 1011
Eco47I GGWCC 3 cut(s) 112, 869, 1321
Eco53kI GAGCTC 2 cut(s) 330, 1930
Eco57I CTGAAG 3 cut(s) 992, 1693, 1779
Eco88I CYCGRG 1 cut(s) 1060
Eco91I GGTNACC 1 cut(s) 810
EcoICRI GAGCTC 2 cut(s) 330, 1930
EcoO65I GGTNACC 1 cut(s) 810
EcoRII CCWGG 4 cut(s) 84, 213, 1172, 1203
EcoT22I ATGCAT 1 cut(s) 1826
EcoT38I GRGCYC 2 cut(s) 332, 1932
FaeI CATG 9 cut(s) 404, 658, 695, 778, 1268, 1619, 1659, 1738, 1995
FaqI GGGAC 3 cut(s) 411, 797, 1228
FatI CATG 9 cut(s) 400, 654, 691, 774, 1264, 1615, 1655, 1734, 1991
FbaI TGATCA 1 cut(s) 1348
Fnu4HI GCNGC 8 cut(s) 105, 470, 533, 1107, 1155, 1158, 1550, 1553
FokI GGATG 3 cut(s) 518, 1096, 1432
FriOI GRGCYC 2 cut(s) 332, 1932
Fsp4HI GCNGC 8 cut(s) 105, 470, 533, 1107, 1155, 1158, 1550, 1553
FspBI CTAG 4 cut(s) 162, 614, 1496, 1767
GlaI GCGC 4 cut(s) 352, 430, 626, 905
GluI GCNGC 8 cut(s) 105, 470, 533, 1107, 1155, 1158, 1550, 1553
GsaI CCCAGC 1 cut(s) 1789
GsuI CTGGAG 2 cut(s) 1615, 1916
HaeIII GGCC 2 cut(s) 664, 1013
HapII CCGG 7 cut(s) 14, 37, 466, 1247, 1449, 1483, 1605
HgaI GACGC 1 cut(s) 188
HhaI GCGC 4 cut(s) 353, 431, 627, 906
Hin1I GRCGYC 2 cut(s) 180, 288
Hin1II CATG 9 cut(s) 404, 658, 695, 778, 1268, 1619, 1659, 1738, 1995
Hin6I GCGC 4 cut(s) 351, 429, 625, 904
HinP1I GCGC 4 cut(s) 351, 429, 625, 904
HincII GTYRAC 2 cut(s) 477, 1417
HindII GTYRAC 2 cut(s) 477, 1417
HindIII AAGCTT 1 cut(s) 407
HpaI GTTAAC 1 cut(s) 1417
HpaII CCGG 7 cut(s) 14, 37, 466, 1247, 1449, 1483, 1605
HphI GGTGA 7 cut(s) 241, 256, 332, 954, 1193, 1801, 1882
Hpy166II GTNNAC 3 cut(s) 477, 917, 1417
Hpy188I TCNGA 8 cut(s) 132, 195, 303, 415, 587, 1240, 1435, 1971
Hpy8I GTNNAC 3 cut(s) 477, 917, 1417
Hpy99I CGWCG 3 cut(s) 67, 277, 290
HpyAV CCTTC 4 cut(s) 801, 936, 967, 1155
HpyCH4III ACNGT 7 cut(s) 10, 262, 426, 985, 1403, 1414, 1749
HpyCH4IV ACGT 2 cut(s) 62, 288
HpyCH4V TGCA 9 cut(s) 646, 1049, 1157, 1361, 1392, 1465, 1555, 1798, 1824
HpyF10VI GCNNNNNNNGC 2 cut(s) 41, 478
HpyF3I CTNAG 7 cut(s) 149, 375, 584, 702, 745, 1457, 1596
HpySE526I ACGT 2 cut(s) 62, 288
Hsp92I GRCGYC 2 cut(s) 180, 288
Hsp92II CATG 9 cut(s) 404, 658, 695, 778, 1268, 1619, 1659, 1738, 1995
HspAI GCGC 4 cut(s) 351, 429, 625, 904
Kpn2I TCCGGA 1 cut(s) 1482
Ksp22I TGATCA 1 cut(s) 1348
KspAI GTTAAC 1 cut(s) 1417
Kzo9I GATC 8 cut(s) 25, 321, 360, 607, 988, 1348, 1876, 1939
LguI GCTCTTC 1 cut(s) 1061
LmnI GCTCC 5 cut(s) 327, 1694, 1894, 1902, 1935
Lsp1109I GCAGC 8 cut(s) 91, 481, 519, 1118, 1141, 1169, 1536, 1539
LweI GCATC 4 cut(s) 464, 496, 1118, 1833
MaeI CTAG 4 cut(s) 162, 614, 1496, 1767
MaeII ACGT 2 cut(s) 62, 288
MaeIII GTNAC 6 cut(s) 256, 748, 810, 960, 1260, 1511
MalI GATC 8 cut(s) 27, 323, 362, 609, 990, 1350, 1878, 1941
MboI GATC 8 cut(s) 25, 321, 360, 607, 988, 1348, 1876, 1939
MfeI CAATTG 3 cut(s) 252, 737, 1420
MflI RGATCY 1 cut(s) 1876
MhlI GDGCHC 2 cut(s) 332, 1932
MlsI TGGCCA 1 cut(s) 1013
MluNI TGGCCA 1 cut(s) 1013
MlyI GAGTC 4 cut(s) 374, 425, 1192, 1250
Mox20I TGGCCA 1 cut(s) 1013
Mph1103I ATGCAT 1 cut(s) 1826
MroI TCCGGA 1 cut(s) 1482
MscI TGGCCA 1 cut(s) 1013
MseI TTAA 9 cut(s) 53, 405, 854, 957, 1230, 1254, 1416, 1715, 1965
MslI CAYNNNNRTG 1 cut(s) 1527
Msp20I TGGCCA 1 cut(s) 1013
MspA1I CMGCKG 1 cut(s) 472
MspI CCGG 7 cut(s) 14, 37, 466, 1247, 1449, 1483, 1605
MspR9I CCNGG 7 cut(s) 37, 86, 215, 1174, 1205, 1247, 1605
MunI CAATTG 3 cut(s) 252, 737, 1420
MvaI CCWGG 4 cut(s) 86, 215, 1174, 1205
MvnI CGCG 1 cut(s) 627
MwoI GCNNNNNNNGC 2 cut(s) 41, 478
NciI CCSGG 3 cut(s) 37, 1247, 1605
NdeII GATC 8 cut(s) 25, 321, 360, 607, 988, 1348, 1876, 1939
NheI GCTAGC 1 cut(s) 1766
NlaIII CATG 9 cut(s) 404, 658, 695, 778, 1268, 1619, 1659, 1738, 1995
NlaIV GGNNCC 4 cut(s) 871, 1072, 1696, 1904
NmuCI GTSAC 4 cut(s) 256, 748, 960, 1260
NsiI ATGCAT 1 cut(s) 1826
NspI RCATGY 3 cut(s) 404, 1619, 1738
PagI TCATGA 2 cut(s) 691, 1991
PciI ACATGT 1 cut(s) 400
PciSI GCTCTTC 1 cut(s) 1061
PfeI GAWTC 6 cut(s) 224, 277, 379, 1377, 1488, 1600
PflFI GACNNNGTC 1 cut(s) 182
PflMI CCANNNNNTGG 3 cut(s) 780, 1451, 1891
PfoI TCCNGGA 1 cut(s) 1603
PkrI GCNGC 8 cut(s) 106, 471, 534, 1108, 1156, 1159, 1551, 1554
PleI GAGTC 4 cut(s) 373, 424, 1191, 1249
PpsI GAGTC 4 cut(s) 373, 424, 1191, 1249
PscI ACATGT 1 cut(s) 400
PshAI GACNNNNGTC 2 cut(s) 254, 1083
PshBI ATTAAT 1 cut(s) 1965
Psp124BI GAGCTC 2 cut(s) 332, 1932
Psp6I CCWGG 4 cut(s) 84, 213, 1172, 1203
PspEI GGTNACC 1 cut(s) 810
PspFI CCCAGC 1 cut(s) 1785
PspGI CCWGG 4 cut(s) 84, 213, 1172, 1203
PspN4I GGNNCC 4 cut(s) 871, 1072, 1696, 1904
PspPI GGNCC 3 cut(s) 112, 869, 1321
PstI CTGCAG 2 cut(s) 1159, 1467
PsuI RGATCY 1 cut(s) 1876
PsyI GACNNNGTC 1 cut(s) 182
PvuII CAGCTG 1 cut(s) 472
RsaI GTAC 6 cut(s) 464, 700, 924, 1166, 1400, 1426
RsaNI GTAC 6 cut(s) 463, 699, 923, 1165, 1399, 1425
RseI CAYNNNNRTG 1 cut(s) 1527
SacI GAGCTC 2 cut(s) 332, 1932
SapI GCTCTTC 1 cut(s) 1061
SaqAI TTAA 9 cut(s) 53, 405, 854, 957, 1230, 1254, 1416, 1715, 1965
SatI GCNGC 8 cut(s) 105, 470, 533, 1107, 1155, 1158, 1550, 1553
Sau3AI GATC 8 cut(s) 25, 321, 360, 607, 988, 1348, 1876, 1939
Sau96I GGNCC 3 cut(s) 112, 869, 1321
ScaI AGTACT 1 cut(s) 700
SchI GAGTC 4 cut(s) 374, 425, 1192, 1250
ScrFI CCNGG 7 cut(s) 37, 86, 215, 1174, 1205, 1247, 1605
SduI GDGCHC 2 cut(s) 332, 1932
SfaNI GCATC 4 cut(s) 464, 496, 1118, 1833
SfcI CTRYAG 4 cut(s) 549, 1155, 1402, 1463
SinI GGWCC 3 cut(s) 112, 869, 1321
SmiMI CAYNNNNRTG 1 cut(s) 1527
SmlI CTYRAG 2 cut(s) 722, 1295
SmoI CTYRAG 2 cut(s) 722, 1295
SpeI ACTAGT 1 cut(s) 613
SspMI CTAG 4 cut(s) 162, 614, 1496, 1767
SstI GAGCTC 2 cut(s) 332, 1932
StyD4I CCNGG 7 cut(s) 35, 84, 213, 1172, 1203, 1245, 1603
TaaI ACNGT 7 cut(s) 10, 262, 426, 985, 1403, 1414, 1749
TaiI ACGT 2 cut(s) 65, 291
TaqI TCGA 4 cut(s) 275, 363, 987, 1077
TaqII GACCGA 2 cut(s) 38, 285
TatI WGTACW 3 cut(s) 698, 1398, 1424
TfiI GAWTC 6 cut(s) 224, 277, 379, 1377, 1488, 1600
Tru1I TTAA 9 cut(s) 53, 405, 854, 957, 1230, 1254, 1416, 1715, 1965
Tru9I TTAA 9 cut(s) 53, 405, 854, 957, 1230, 1254, 1416, 1715, 1965
TscAI CASTG 5 cut(s) 265, 507, 753, 1752, 1904
TseFI GTSAC 4 cut(s) 256, 748, 960, 1260
TseI GCWGC 8 cut(s) 104, 469, 532, 1106, 1154, 1157, 1549, 1552
Tsp45I GTSAC 4 cut(s) 256, 748, 960, 1260
TspDTI ATGAA 9 cut(s) 324, 680, 1149, 1545, 1680, 1689, 1825, 1872, 1980
TspRI CASTG 5 cut(s) 265, 507, 753, 1752, 1904
Tth111I GACNNNGTC 1 cut(s) 182
Van91I CCANNNNNTGG 3 cut(s) 780, 1451, 1891
VpaK11BI GGWCC 3 cut(s) 112, 869, 1321
VspI ATTAAT 1 cut(s) 1965
XapI RAATTY 1 cut(s) 1575
XceI RCATGY 3 cut(s) 404, 1619, 1738
XspI CTAG 4 cut(s) 162, 614, 1496, 1767
ZraI GACGTC 1 cut(s) 289
ZrmI AGTACT 1 cut(s) 700
Zsp2I ATGCAT 1 cut(s) 1826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.