MD02G1079300.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0012985
Physical Location & Seq
Reverse (-)
6239041 .. 6249901
10861 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1079300.v1.1.491

Sequence Viewer

Length: 2037 bp
ATGACCTCCTTACCGGAAATAACCGATCTCTTCGCCAGGCTCGCCATCCACCTGAAAATCCCAAACGACACGTCGTTTCCTCCTCGCACTTCCAAAGAAGACCTAGACGACGCAGCTCTGGATCTCTCGATTTCCGAGCTGAACCAATCTCTGAACCCCAACGGCGATTCTAGGGTTAGGGTTTTGGACACGGTCCTATCTCTGATGTGCTTCAAAGCTCCCCAGGTTTTCGATTCGGAGATTGAGTATTTAGTGAATACAATTGCTGCGGTGTTGTTGTCTTCCGTTCGTTGCAAGGTTTTTCGGTATCCGAAAGGCGAGATTTTGCTGATTGGGAGCTCGATTTCTCAGCGGGATTGCGGGCATTTGATCGAAGCTTGTGCTGATGTTCTTGAGAAATTGGAGGGACATGGTAAGCTTTCGGATTCGATACTATGTGCCATTGTAAGAGTTGCAAGTTCTGCTTCTTTCTACCGGCACCAGTTAATGCCCGTTCTTGGCGTAAAATCAGTGGATGCGAAAAATACCATGATCTCAAAGCTGCTCTGTCATTTGCCCAGAGAAAAATTCCTTGAGAACAACAAAATTCCATTAAGGCTGCTACTGTGGTATCTTGACCCTTTAATTTTGAAGCGCGATATTTCAAACATTTTGCAAGAAACCATGGAAAGGCCATTCCTTTGTTTGAGTAGGAAATTTCATGAAAGTAATGATTGGCGCTCCATTATCACATTGTTGGTACTTTCTCCCTTTATGTTCGTTGAGGCAAGAGCTTTGTTGCACCGGTGGTTTCTGGTGACGGGTCTAGCTTCTGTGCTTGAGCTTCTAATTCAATTGGTTTCAACCACATTAGATGTGGTTTCAAGACCAATGTTCTGGGGCATATCAGCTGAAGTGGGAGCAAAGTTGCCATTTTTGAATGCTTATTTTCCGTACAATCAACCATTGTTAAGGACCTTGGTTGGACCCCTCTCCTACGATGGTCTCCTACAATTAGTGCACAACACAAAGGACTCGGTCCCTTTTGCCCAGAAACAACTTTATCCGACTTTTAAGCCACCCACAGTGAAGGTTGCAACAATTGATCATAAATCTATCTGGTCTCTGGCCATCAACTTCCCAGATTGGTTCTACCTTGCTTCTGCATTGCTCTTCTCAGAGAAAAGTACTCACGACAGTTGCCATCCAGAATGCATGTTGGCAGCATCCAAAGTTGGAAAAACACACGAGGAGCTTCCTTATGTTGCTGCAGCACGGTACATTGCCTGGATTTTGAGTCCTCTTGGTAAATCTCACCATGCCTCGCTGACTGATTGTTTAATTAAAGCATCAGAGTCTTTGGCTTTAAAGCAATTTGGCTCTGGTTCACATGACAAGGAAATACATGGCTACAAGAAGAAACTCAAGAAACCGAAATTGTGTGAAGAGGAATCTGCTTCCATTGCAGTCTGGCTCAATGGATTCAGTAATATATACACAAGGTATTGCAATGAAACAAGTGAAACAAAACCATCTTGTGGTCTTAATCTGCAGAAAAATGTCTTGTTTCGGAGAATCCCACTAGGCATCTTGCTCAGCTGTCCCCATCGTATCAATGAAGATGAATGTGAATTGCTGCTGCATTATGCCGCAACTGGTAGAATTTTTCAGTTAAGGGAAACTAAGACTACTGGATTGAAGCATGTAAAATGGAGCTCCAAATGGCATACGAACTCAACTGCATGGGGTGATGAATGTAATGAAAAGGAGGCTTCAGCAGGTGCCTGTCTAGTATTCAGTTTAACTGATATCATTGAAAGTATGTCTGCTTCACTGTTTGAGACCGAAGACGCTGGTGCAGACTATATCTGCCGGGTGAAAATGCAGGTCAGCAAATACTTGATAAAATGCATCAAGAGGCTAATCCAACTCAAAATTGACAATGGAAACTGGGAGGTAATGGATCTCCGCCGTAGATTGGAGAACTGGAGGCATCAGGGACAAGAAGTACCAGAACTCAACAAAGACTTAGACGATGTCATTCCTTTCTTGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

679

Amino Acids

76.67

Weight (kDa)

7.79

Isoelectric Point (pI)

46.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012985)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G60310 AT3G60310
fragaria_vesca FvH4_1g07420
malus_domestica MD02G1079300.v1.1
prunus_persica Prupe.7G209900_v2.0.a1
pyrus_communis pycom02g06310
rosa_chinensis RchiOBHm_Chr2g0093321
rosa_laevigata RLG00000016390
rosa_multiflora Rmu_sc0002089.1_g000004 Rmu_sc0005227.1_g000001 Rmu_ssc0000483.1_g000001
rosa_roxburghii Rroxscaffold_2G00148190
rosa_rugosa Rorug02G0034800
rosa_samantha Rh2AG080900 Rh2BG082000 Rh2CG084200 Rh2DG079900
rosa_wichuraiana Rw2G006590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1748
Acc36I ACCTGC 2 cut(s) 1748, 1855
AccB1I GGYRCC 2 cut(s) 477, 1760
AccB7I CCANNNNNTGG 1 cut(s) 1517
AccII CGCG 1 cut(s) 636
AciI CCGC 5 cut(s) 269, 352, 360, 1629, 1948
AclWI GGATC 2 cut(s) 129, 1950
AcoI YGGCCR 1 cut(s) 1107
AcsI RAATTY 4 cut(s) 566, 585, 695, 1641
AcuI CTGAAG 2 cut(s) 912, 1737
AfaI GTAC 5 cut(s) 741, 935, 1168, 1259, 1989
AfiI CCNNNNNNNGG 4 cut(s) 497, 669, 1517, 1957
AflIII ACRYGT 1 cut(s) 69
AgeI ACCGGT 1 cut(s) 783
AgsI TTSAA 9 cut(s) 214, 631, 645, 833, 843, 864, 919, 1678, 1796
AjiI CACGTC 1 cut(s) 72
AjnI CCWGG 3 cut(s) 35, 222, 1265
Alw21I GWGCWC 3 cut(s) 341, 1002, 1697
Alw26I GTCTC 3 cut(s) 989, 1107, 1814
Alw44I GTGCAC 1 cut(s) 998
AlwI GGATC 2 cut(s) 129, 1950
AoxI GGCC 2 cut(s) 671, 1107
ApaLI GTGCAC 1 cut(s) 998
ApeKI GCWGC 9 cut(s) 113, 266, 541, 598, 1202, 1247, 1250, 1615, 1618
ApoI RAATTY 4 cut(s) 566, 585, 695, 1641
ArsI GACNNNNNNTTYG 2 cut(s) 56, 88
AsiGI ACCGGT 1 cut(s) 783
AspLEI GCGC 2 cut(s) 636, 720
AspS9I GGNCC 4 cut(s) 193, 954, 965, 1018
AsuC2I CCSGG 1 cut(s) 1853
AsuHPI GGTGA 4 cut(s) 808, 1286, 1739, 1867
AvaII GGWCC 4 cut(s) 193, 954, 965, 1018
BaeGI GKGCMC 1 cut(s) 1002
BaeI ACNNNNGTAYC 2 cut(s) 593, 626
BalI TGGCCA 1 cut(s) 1109
BanI GGYRCC 2 cut(s) 477, 1760
BanII GRGCYC 2 cut(s) 341, 1697
BarI GAAGNNNNNNTAC 2 cut(s) 1792, 1824
BauI CACGAG 1 cut(s) 1226
BbsI GAAGAC 3 cut(s) 105, 273, 1833
Bbv12I GWGCWC 3 cut(s) 341, 1002, 1697
BbvI GCAGC 9 cut(s) 125, 253, 528, 585, 1214, 1234, 1262, 1602, 1605
BccI CCATC 6 cut(s) 53, 974, 1118, 1191, 1519, 1593
BceAI ACGGC 2 cut(s) 178, 1935
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BciT130I CCWGG 3 cut(s) 37, 224, 1267
BciVI GTATCC 1 cut(s) 318
BclI TGATCA 1 cut(s) 1084
BcnI CCSGG 1 cut(s) 1853
BcoDI GTCTC 3 cut(s) 989, 1107, 1814
BfaI CTAG 5 cut(s) 104, 171, 806, 1562, 1769
BfmI CTRYAG 2 cut(s) 1248, 1529
BfoI RGCGCY 1 cut(s) 721
BfuAI ACCTGC 2 cut(s) 1748, 1855
BfuI GTATCC 1 cut(s) 318
BlpI GCTNAGC 1 cut(s) 1574
BmcAI AGTACT 1 cut(s) 1168
Bme1390I CCNGG 4 cut(s) 37, 224, 1267, 1853
Bme18I GGWCC 4 cut(s) 193, 954, 965, 1018
BmgBI CACGTC 1 cut(s) 72
BmgT120I GGNCC 4 cut(s) 193, 954, 965, 1018
BmiI GGNNCC 4 cut(s) 479, 967, 1020, 1762
BmrFI CCNGG 4 cut(s) 37, 224, 1267, 1853
BmrI ACTGGG 1 cut(s) 1939
BmsI GCATC 6 cut(s) 505, 1214, 1337, 1575, 1899, 1981
BmuI ACTGGG 1 cut(s) 1939
BpiI GAAGAC 3 cut(s) 105, 273, 1833
BpmI CTGGAG 1 cut(s) 1987
Bpu1102I GCTNAGC 1 cut(s) 1574
BpuEI CTTGAG 4 cut(s) 413, 593, 839, 1388
BpuMI CCSGG 1 cut(s) 1853
BsaI GGTCTC 3 cut(s) 989, 1107, 1814
BsaJI CCNNGG 3 cut(s) 222, 663, 957
BsaWI WCCGGW 2 cut(s) 13, 783
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 4 cut(s) 497, 669, 1517, 1957
Bse118I RCCGGY 2 cut(s) 474, 783
Bse1I ACTGG 5 cut(s) 481, 1639, 1675, 1934, 1970
Bse3DI GCAATG 4 cut(s) 1145, 1260, 1440, 1495
BseBI CCWGG 3 cut(s) 37, 224, 1267
BseDI CCNNGG 3 cut(s) 222, 663, 957
BseGI GGATG 4 cut(s) 45, 520, 1183, 1205
BseLI CCNNNNNNNGG 4 cut(s) 497, 669, 1517, 1957
BseMI GCAATG 4 cut(s) 1145, 1260, 1440, 1495
BseMII CTCAG 3 cut(s) 362, 1170, 1588
BseNI ACTGG 5 cut(s) 481, 1639, 1675, 1934, 1970
BseRI GAGGAG 2 cut(s) 72, 1244
BseSI GKGCMC 1 cut(s) 1002
BseXI GCAGC 9 cut(s) 125, 253, 528, 585, 1214, 1234, 1262, 1602, 1605
BsgI GTGCAG 1 cut(s) 1857
Bsh1236I CGCG 1 cut(s) 636
BshFI GGCC 2 cut(s) 673, 1109
BshNI GGYRCC 2 cut(s) 477, 1760
BshTI ACCGGT 1 cut(s) 783
BsiHKAI GWGCWC 3 cut(s) 341, 1002, 1697
BsiSI CCGG 4 cut(s) 14, 475, 784, 1852
BslFI GGGAC 4 cut(s) 420, 1004, 1566, 1992
BslI CCNNNNNNNGG 4 cut(s) 497, 669, 1517, 1957
BsmAI GTCTC 3 cut(s) 989, 1107, 1814
BsmFI GGGAC 4 cut(s) 420, 1004, 1566, 1992
BsmI GAATGC 2 cut(s) 925, 1196
BsnI GGCC 2 cut(s) 673, 1109
Bso31I GGTCTC 3 cut(s) 989, 1107, 1814
Bsp1286I GDGCHC 3 cut(s) 341, 1002, 1697
Bsp143I GATC 6 cut(s) 25, 121, 369, 531, 1084, 1942
Bsp1720I GCTNAGC 1 cut(s) 1574
Bsp19I CCATGG 1 cut(s) 663
BspACI CCGC 5 cut(s) 269, 352, 360, 1629, 1948
BspANI GGCC 2 cut(s) 673, 1109
BspCNI CTCAG 3 cut(s) 361, 1169, 1587
BspFNI CGCG 1 cut(s) 636
BspHI TCATGA 1 cut(s) 700
BspLI GGNNCC 4 cut(s) 479, 967, 1020, 1762
BspMAI CTGCAG 2 cut(s) 1252, 1533
BspMI ACCTGC 2 cut(s) 1748, 1855
BspPI GGATC 2 cut(s) 129, 1950
BspQI GCTCTTC 1 cut(s) 1157
BspT107I GGYRCC 2 cut(s) 477, 1760
BspTNI GGTCTC 3 cut(s) 989, 1107, 1814
BsrDI GCAATG 4 cut(s) 1145, 1260, 1440, 1495
BsrFI RCCGGY 2 cut(s) 474, 783
BsrI ACTGG 5 cut(s) 481, 1639, 1675, 1934, 1970
BssAI RCCGGY 2 cut(s) 474, 783
BssECI CCNNGG 3 cut(s) 222, 663, 957
BssMI GATC 6 cut(s) 25, 121, 369, 531, 1084, 1942
BssSI CACGAG 1 cut(s) 1226
BssT1I CCWWGG 2 cut(s) 663, 957
Bst2BI CACGAG 1 cut(s) 1226
Bst2UI CCWGG 3 cut(s) 37, 224, 1267
Bst4CI ACNGT 6 cut(s) 193, 606, 1066, 1178, 1257, 1815
Bst6I CTCTTC 3 cut(s) 35, 1157, 1419
BstAPI GCANNNNNTGC 1 cut(s) 461
BstC8I GCNNGC 2 cut(s) 42, 362
BstDEI CTNAG 5 cut(s) 348, 1156, 1574, 1662, 2008
BstDSI CCRYGG 1 cut(s) 663
BstF5I GGATG 4 cut(s) 45, 520, 1183, 1205
BstFNI CGCG 1 cut(s) 636
BstH2I RGCGCY 1 cut(s) 721
BstHHI GCGC 2 cut(s) 636, 720
BstKTI GATC 6 cut(s) 28, 124, 372, 534, 1087, 1945
BstMAI GTCTC 3 cut(s) 989, 1107, 1814
BstMBI GATC 6 cut(s) 25, 121, 369, 531, 1084, 1942
BstMWI GCNNNNNNNGC 3 cut(s) 41, 461, 1442
BstNI CCWGG 3 cut(s) 37, 224, 1267
BstNSI RCATGY 2 cut(s) 1198, 1685
BstSCI CCNGG 4 cut(s) 35, 222, 1265, 1851
BstSFI CTRYAG 2 cut(s) 1248, 1529
BstSLI GKGCMC 1 cut(s) 1002
BstUI CGCG 1 cut(s) 636
BstV1I GCAGC 9 cut(s) 125, 253, 528, 585, 1214, 1234, 1262, 1602, 1605
BstV2I GAAGAC 3 cut(s) 105, 273, 1833
BstX2I RGATCY 2 cut(s) 121, 1942
BstXI CCANNNNNNTGG 1 cut(s) 876
BstYI RGATCY 2 cut(s) 121, 1942
BsuI GTATCC 1 cut(s) 318
BsuRI GGCC 2 cut(s) 673, 1109
BtgI CCRYGG 1 cut(s) 663
BtrI CACGTC 1 cut(s) 72
BtsCI GGATG 4 cut(s) 45, 520, 1183, 1205
BtsIMutI CAGTG 3 cut(s) 516, 1071, 1811
BveI ACCTGC 2 cut(s) 1748, 1855
Cac8I GCNNGC 2 cut(s) 42, 362
CciI TCATGA 1 cut(s) 700
CfoI GCGC 2 cut(s) 636, 720
Cfr10I RCCGGY 2 cut(s) 474, 783
Cfr13I GGNCC 4 cut(s) 193, 954, 965, 1018
CseI GACGC 2 cut(s) 119, 1838
Csp6I GTAC 5 cut(s) 740, 934, 1167, 1258, 1988
CspAI ACCGGT 1 cut(s) 783
CviQI GTAC 5 cut(s) 740, 934, 1167, 1258, 1988
DdeI CTNAG 5 cut(s) 348, 1156, 1574, 1662, 2008
DpnI GATC 6 cut(s) 27, 123, 371, 533, 1086, 1944
DpnII GATC 6 cut(s) 25, 121, 369, 531, 1084, 1942
DraI TTTAAA 1 cut(s) 1347
EaeI YGGCCR 1 cut(s) 1107
Eam1104I CTCTTC 3 cut(s) 35, 1157, 1419
EarI CTCTTC 3 cut(s) 35, 1157, 1419
EciI GGCGGA 1 cut(s) 1937
Ecl136II GAGCTC 2 cut(s) 339, 1695
Eco130I CCWWGG 2 cut(s) 663, 957
Eco24I GRGCYC 2 cut(s) 341, 1697
Eco31I GGTCTC 3 cut(s) 989, 1107, 1814
Eco32I GATATC 1 cut(s) 1789
Eco47I GGWCC 4 cut(s) 193, 954, 965, 1018
Eco53kI GAGCTC 2 cut(s) 339, 1695
Eco57I CTGAAG 2 cut(s) 912, 1737
EcoICRI GAGCTC 2 cut(s) 339, 1695
EcoO109I RGGNCCY 1 cut(s) 954
EcoRII CCWGG 3 cut(s) 35, 222, 1265
EcoRV GATATC 1 cut(s) 1789
EcoT14I CCWWGG 2 cut(s) 663, 957
EcoT22I ATGCAT 2 cut(s) 1196, 1892
EcoT38I GRGCYC 2 cut(s) 341, 1697
ErhI CCWWGG 2 cut(s) 663, 957
FalI AAGNNNNNCTT 2 cut(s) 448, 480
FaqI GGGAC 4 cut(s) 420, 1004, 1566, 1992
FauI CCCGC 2 cut(s) 345, 353
FbaI TGATCA 1 cut(s) 1084
FokI GGATG 4 cut(s) 32, 527, 1170, 1192
FriOI GRGCYC 2 cut(s) 341, 1697
FspBI CTAG 5 cut(s) 104, 171, 806, 1562, 1769
GlaI GCGC 2 cut(s) 635, 719
GsuI CTGGAG 1 cut(s) 1987
HaeII RGCGCY 1 cut(s) 721
HaeIII GGCC 2 cut(s) 673, 1109
HapII CCGG 4 cut(s) 14, 475, 784, 1852
HgaI GACGC 2 cut(s) 119, 1838
HhaI GCGC 2 cut(s) 636, 720
Hin6I GCGC 2 cut(s) 634, 718
HinP1I GCGC 2 cut(s) 634, 718
HindIII AAGCTT 2 cut(s) 375, 416
HinfI GANTC 9 cut(s) 167, 233, 425, 1013, 1276, 1334, 1430, 1461, 1554
HpaII CCGG 4 cut(s) 14, 475, 784, 1852
HphI GGTGA 4 cut(s) 808, 1286, 1739, 1867
Hpy166II GTNNAC 2 cut(s) 1000, 1367
Hpy8I GTNNAC 2 cut(s) 1000, 1367
Hpy99I CGWCG 2 cut(s) 76, 113
HpyAV CCTTC 1 cut(s) 1063
HpyCH4III ACNGT 6 cut(s) 193, 606, 1066, 1178, 1257, 1815
HpyCH4IV ACGT 1 cut(s) 71
HpyF10VI GCNNNNNNNGC 3 cut(s) 41, 461, 1442
HpyF3I CTNAG 5 cut(s) 348, 1156, 1574, 1662, 2008
HpySE526I ACGT 1 cut(s) 71
HspAI GCGC 2 cut(s) 634, 718
Ksp22I TGATCA 1 cut(s) 1084
Kzo9I GATC 6 cut(s) 25, 121, 369, 531, 1084, 1942
LguI GCTCTTC 1 cut(s) 1157
LmnI GCTCC 7 cut(s) 223, 336, 725, 899, 1231, 1692, 1700
Lsp1109I GCAGC 9 cut(s) 125, 253, 528, 585, 1214, 1234, 1262, 1602, 1605
LweI GCATC 6 cut(s) 505, 1214, 1337, 1575, 1899, 1981
MaeI CTAG 5 cut(s) 104, 171, 806, 1562, 1769
MaeII ACGT 1 cut(s) 71
MaeIII GTNAC 1 cut(s) 796
MalI GATC 6 cut(s) 27, 123, 371, 533, 1086, 1944
MboI GATC 6 cut(s) 25, 121, 369, 531, 1084, 1942
MboII GAAGA 8 cut(s) 22, 110, 273, 1144, 1408, 1436, 1610, 1838
MfeI CAATTG 3 cut(s) 261, 833, 1080
MflI RGATCY 2 cut(s) 121, 1942
MhlI GDGCHC 3 cut(s) 341, 1002, 1697
MlsI TGGCCA 1 cut(s) 1109
MluNI TGGCCA 1 cut(s) 1109
MlyI GAGTC 3 cut(s) 1007, 1285, 1343
MmeI TCCRAC 4 cut(s) 943, 1070, 1195, 1930
Mox20I TGGCCA 1 cut(s) 1109
Mph1103I ATGCAT 2 cut(s) 1196, 1892
MscI TGGCCA 1 cut(s) 1109
Msp20I TGGCCA 1 cut(s) 1109
MspA1I CMGCKG 3 cut(s) 352, 890, 1578
MspI CCGG 4 cut(s) 14, 475, 784, 1852
MspR9I CCNGG 4 cut(s) 37, 224, 1267, 1853
MunI CAATTG 3 cut(s) 261, 833, 1080
Mva1269I GAATGC 2 cut(s) 925, 1196
MvaI CCWGG 3 cut(s) 37, 224, 1267
MvnI CGCG 1 cut(s) 636
MwoI GCNNNNNNNGC 3 cut(s) 41, 461, 1442
NciI CCSGG 1 cut(s) 1853
NcoI CCATGG 1 cut(s) 663
NdeII GATC 6 cut(s) 25, 121, 369, 531, 1084, 1942
NlaIV GGNNCC 4 cut(s) 479, 967, 1020, 1762
NmuCI GTSAC 1 cut(s) 796
NsiI ATGCAT 2 cut(s) 1196, 1892
NspI RCATGY 2 cut(s) 1198, 1685
PacI TTAATTAA 1 cut(s) 1323
PagI TCATGA 1 cut(s) 700
PaqCI CACCTGC 1 cut(s) 1748
PciSI GCTCTTC 1 cut(s) 1157
PctI GAATGC 2 cut(s) 925, 1196
PfeI GAWTC 6 cut(s) 167, 233, 425, 1430, 1461, 1554
PflFI GACNNNGTC 3 cut(s) 191, 1016, 2015
PflMI CCANNNNNTGG 1 cut(s) 1517
PinAI ACCGGT 1 cut(s) 783
PleI GAGTC 3 cut(s) 1007, 1284, 1342
PpsI GAGTC 3 cut(s) 1007, 1284, 1342
PpuMI RGGWCCY 1 cut(s) 954
Psp124BI GAGCTC 2 cut(s) 341, 1697
Psp5II RGGWCCY 1 cut(s) 954
Psp6I CCWGG 3 cut(s) 35, 222, 1265
PspGI CCWGG 3 cut(s) 35, 222, 1265
PspN4I GGNNCC 4 cut(s) 479, 967, 1020, 1762
PspPI GGNCC 4 cut(s) 193, 954, 965, 1018
PspPPI RGGWCCY 1 cut(s) 954
PstI CTGCAG 2 cut(s) 1252, 1533
PsuI RGATCY 2 cut(s) 121, 1942
PsyI GACNNNGTC 3 cut(s) 191, 1016, 2015
PvuII CAGCTG 2 cut(s) 890, 1578
RsaI GTAC 5 cut(s) 741, 935, 1168, 1259, 1989
RsaNI GTAC 5 cut(s) 740, 934, 1167, 1258, 1988
SacI GAGCTC 2 cut(s) 341, 1697
SapI GCTCTTC 1 cut(s) 1157
Sau3AI GATC 6 cut(s) 25, 121, 369, 531, 1084, 1942
Sau96I GGNCC 4 cut(s) 193, 954, 965, 1018
ScaI AGTACT 1 cut(s) 1168
SchI GAGTC 3 cut(s) 1007, 1285, 1343
ScrFI CCNGG 4 cut(s) 37, 224, 1267, 1853
SduI GDGCHC 3 cut(s) 341, 1002, 1697
SfaNI GCATC 6 cut(s) 505, 1214, 1337, 1575, 1899, 1981
SfcI CTRYAG 2 cut(s) 1248, 1529
SgrAI CRCCGGYG 1 cut(s) 783
SinI GGWCC 4 cut(s) 193, 954, 965, 1018
SmlI CTYRAG 4 cut(s) 392, 572, 818, 1403
SmoI CTYRAG 4 cut(s) 392, 572, 818, 1403
SsiI CCGC 5 cut(s) 269, 352, 360, 1629, 1948
SspMI CTAG 5 cut(s) 104, 171, 806, 1562, 1769
SstI GAGCTC 2 cut(s) 341, 1697
StyD4I CCNGG 4 cut(s) 35, 222, 1265, 1851
StyI CCWWGG 2 cut(s) 663, 957
TaaI ACNGT 6 cut(s) 193, 606, 1066, 1178, 1257, 1815
TaiI ACGT 1 cut(s) 74
TaqI TCGA 5 cut(s) 128, 231, 341, 372, 428
TaqII GACCGA 2 cut(s) 1006, 1838
TatI WGTACW 1 cut(s) 1166
TauI GCSGC 1 cut(s) 1631
TfiI GAWTC 6 cut(s) 167, 233, 425, 1430, 1461, 1554
TscAI CASTG 3 cut(s) 516, 1071, 1818
TseFI GTSAC 1 cut(s) 796
TseI GCWGC 9 cut(s) 113, 266, 541, 598, 1202, 1247, 1250, 1615, 1618
Tsp45I GTSAC 1 cut(s) 796
TspDTI ATGAA 7 cut(s) 689, 717, 1506, 1611, 1617, 1746, 1755
TspGWI ACGGA 2 cut(s) 274, 921
TspRI CASTG 3 cut(s) 516, 1071, 1818
Tth111I GACNNNGTC 3 cut(s) 191, 1016, 2015
Van91I CCANNNNNTGG 1 cut(s) 1517
VneI GTGCAC 1 cut(s) 998
VpaK11BI GGWCC 4 cut(s) 193, 954, 965, 1018
XapI RAATTY 4 cut(s) 566, 585, 695, 1641
XceI RCATGY 2 cut(s) 1198, 1685
XcmI CCANNNNNNNNNTGG 1 cut(s) 853
XspI CTAG 5 cut(s) 104, 171, 806, 1562, 1769
ZrmI AGTACT 1 cut(s) 1168
Zsp2I ATGCAT 2 cut(s) 1196, 1892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.