FvH4_1g07420

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0012985
Physical Location & Seq
Reverse (-)
3944521 .. 3947708
3188 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g07420.t1

Sequence Viewer

Length: 2079 bp
ATGACCTCAGTGCCGGAACTGACCGACCTCTTCACCCGGCTCGCCACCCACTTAAACGACACGTCGTTGCCTCATCGCACTTCCCAAGACCAACAAGCCGAATCTGCTCTGGGCCTATCAATTTCGAATCTGAACCAGTCCCTAAACCTCGGCGGCAATTCTAGGGTTAGGGTTTTGGACACGGTCCTATCTCTGATGTGCTTCAAAGCGCCCCAGGTTTTCGATTCGGTGATTGCGTATTCGGTGAAGACAATTGTCACTGTTTTGTTGTCTTCGATTCGCTGTGACGTCTTTCGGAGACCGAAAGATGAAATCTTGGTGATTGGGAGCTCCATTTCTCGCCGAGATTGCGGTGATTGGATCGAATCGTGTGGTGAGATTCTTGAGAAATTGGAGGGACATGGTAAGCTTTCGGAGTCTTTACTGTGTGCCATTGTGAGAGTTGCTAGTTCGGCATCTCTGTATCGGCAGCCGTCAATTCCCATTCGTGATGTGAAATCAGTGGATGGGAGGAATAGCTTGATTTCGAAGCTGCTATGTCATTTGCCTAGTGCAACGTTGCTTGATAACGACAAAATATCTCTCAGGTTGCTGATTTGGTATCTTGATCCACTGGTTTTGAAGCGTGATGTTTCAAACATCTTGCAAGTAGCCATGAGGAGGCCATTCCTTTGTTTGAGTAAAGAGTTTCATGAGAGTACTGAGTGGCGCTCCATTATCATATCCTTGGTACTTTCTCCCATGATGTTTGTTGAGGCCAGAGTTTTGTTGCACAGATGGTTCCTACTCACGGGTTTGGCTTCTGTGCATGAGCTTCTAATTCAATTGGTCTCAGTGACATTAGATGTGATTTTGAGACCCATGTTCTGGGACATATCAGCAGAATTGGGAGGAAAGTTACCGTTTTCCAATGCTTATTTTCCTTACAACCACCACTTGTTAAGGAACTTGGCTGGACCCCTCTCCTATGATGGTTTCCTACATCTACTGAACGAGACAAGTGAACCGGTACCTTCTGCCAAGACTCAACTTTATCCATCTATTAAGTCACCTATACTGAAGGTTTCAGCTGTCGATCACAAGTCTATCTGGTCCCTGGCTATCAACTTCCCAGATTGGTTCTACTTTGCTTCTGCATTGCTGTTCTCAGAGAAAGGTTCCCACAACAATTGTCATAAAGTATGCTTATTGGCAGCATCCAAAGTTGGGAAAACACATTATGAAGAACTGCCTTCCATTGCGGCAGCAAGGTACATCGCTTGGATTTTGAGTCCTGTTAGTAAGTCTCACCAGAATAGGCTGGCCGATTGCTTGATTAAACATTCAGAGTCCCCGGCTTTTAAACAGTCACGTGACAAAGAAACATTCTACAAGAAGAAACTCAAGAAACTCAAACTCTGTGAAGAGGATCATACTTCCACAAGAGAGTATGATGATCAAAGCATTGCAGTCTGGCTCAATGGATTCAATAAAATATGCACGGTATATTGCTGTGAAAATGTTAACAGTTATGAATCATCTGAAAGAAAACCATCCGGTGGTCTTAGTCTGCAGAAAAATGTCTTGTTCCAGAGAATCCCACTAGGTATCTTGCTTTGTTGCTCCAGTCGTCTCAGTGAAGAGGGATTAGAACTGCTGCTGAATTATGCCACCACGGGCAGAATTTTTCAGTCAAGGGAAACTAAGACTCCCGGACTGAAGCATATAAAATGGAACTCCAGAGGGAATAAGAACCCAATTTCATGGACTGATGAATGTAACGAAAAAGAGGTTGTAGCAGGTGCATTTCTTGTTTTCAGCTTCACCGATATTGTTGAAAGTATGTGTTCTTCACTATTTGAGACCCAAGAGGCTAGCATAGACTTCATTTGCCGGGTGAAAGTGCAGGTCGGCAAATACTTGATTAAATGCATTAAGAGGTTCATTCAACTCGGAGTTGATGATGATGTGGTGGTGATGGATCTCTGCAGTAGATTGGAGCAGTGGAGGCATCAAGGACGAGTAGTATTGGAGCTCCAGAAAGATGTTGATAATGTCATTCAAGTCCTAAATCAGATATTTGCCTTCTGTGTTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

693

Amino Acids

78.17

Weight (kDa)

8.33

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012985)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G60310 AT3G60310
fragaria_vesca FvH4_1g07420
malus_domestica MD02G1079300.v1.1
prunus_persica Prupe.7G209900_v2.0.a1
pyrus_communis pycom02g06310
rosa_chinensis RchiOBHm_Chr2g0093321
rosa_laevigata RLG00000016390
rosa_multiflora Rmu_sc0002089.1_g000004 Rmu_sc0005227.1_g000001 Rmu_ssc0000483.1_g000001
rosa_roxburghii Rroxscaffold_2G00148190
rosa_rugosa Rorug02G0034800
rosa_samantha Rh2AG080900 Rh2BG082000 Rh2CG084200 Rh2DG079900
rosa_wichuraiana Rw2G006590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1769
AatII GACGTC 1 cut(s) 291
Acc36I ACCTGC 2 cut(s) 1769, 1876
Acc65I GGTACC 1 cut(s) 1009
AccB1I GGYRCC 1 cut(s) 1009
AccB7I CCANNNNNTGG 2 cut(s) 867, 1538
AciI CCGC 3 cut(s) 153, 351, 1241
AclI AACGTT 1 cut(s) 557
AclWI GGATC 4 cut(s) 368, 602, 1416, 1968
AcoI YGGCCR 1 cut(s) 1302
AcsI RAATTY 1 cut(s) 1662
AcuI CTGAAG 2 cut(s) 1079, 1718
AcvI CACGTG 1 cut(s) 1352
AcyI GRCGYC 1 cut(s) 288
AfaI GTAC 4 cut(s) 700, 732, 1011, 1253
AfiI CCNNNNNNNGG 5 cut(s) 660, 790, 867, 1206, 1538
AflIII ACRYGT 1 cut(s) 60
AgeI ACCGGT 1 cut(s) 1006
AgsI TTSAA 8 cut(s) 205, 622, 636, 824, 1468, 1817, 1928, 2042
AjiI CACGTC 1 cut(s) 63
AjnI CCWGG 2 cut(s) 213, 1095
AluBI AGCT 8 cut(s) 330, 409, 519, 532, 814, 1070, 1800, 2014
AluI AGCT 8 cut(s) 330, 409, 519, 532, 814, 1070, 1800, 2014
Alw21I GWGCWC 2 cut(s) 332, 2016
Alw26I GTCTC 7 cut(s) 292, 835, 850, 989, 1290, 1616, 1835
AlwI GGATC 4 cut(s) 368, 602, 1416, 1968
AoxI GGCC 4 cut(s) 112, 662, 756, 1302
ApeKI GCWGC 5 cut(s) 469, 532, 1193, 1244, 1636
ApoI RAATTY 1 cut(s) 1662
AsiGI ACCGGT 1 cut(s) 1006
Asp718I GGTACC 1 cut(s) 1009
AspLEI GCGC 2 cut(s) 211, 711
AspS9I GGNCC 4 cut(s) 112, 184, 956, 1092
AsuC2I CCSGG 4 cut(s) 37, 1334, 1692, 1874
AsuII TTCGAA 2 cut(s) 125, 527
AsuNHI GCTAGC 1 cut(s) 1853
AvaII GGWCC 3 cut(s) 184, 956, 1092
BanI GGYRCC 1 cut(s) 1009
BanII GRGCYC 2 cut(s) 332, 2016
BarI GAAGNNNNNNTAC 2 cut(s) 1813, 1845
BbrPI CACGTG 1 cut(s) 1352
BbsI GAAGAC 2 cut(s) 254, 264
Bbv12I GWGCWC 2 cut(s) 332, 2016
BbvI GCAGC 5 cut(s) 481, 519, 1205, 1256, 1623
BccI CCATC 6 cut(s) 500, 771, 965, 1045, 1540, 1951
BceAI ACGGC 1 cut(s) 457
BciT130I CCWGG 2 cut(s) 215, 1097
BclI TGATCA 1 cut(s) 1435
BcnI CCSGG 4 cut(s) 37, 1334, 1692, 1874
BcoDI GTCTC 7 cut(s) 292, 835, 850, 989, 1290, 1616, 1835
BfaI CTAG 5 cut(s) 162, 447, 549, 1583, 1854
BfmI CTRYAG 2 cut(s) 1550, 1966
BfoI RGCGCY 2 cut(s) 212, 712
BfuAI ACCTGC 2 cut(s) 1769, 1876
BisI GCNGC 7 cut(s) 154, 470, 533, 1194, 1242, 1245, 1637
BlsI GCNGC 7 cut(s) 155, 471, 534, 1195, 1243, 1246, 1638
BmcAI AGTACT 1 cut(s) 700
Bme1390I CCNGG 6 cut(s) 37, 215, 1097, 1334, 1692, 1874
Bme18I GGWCC 3 cut(s) 184, 956, 1092
BmgBI CACGTC 1 cut(s) 63
BmgT120I GGNCC 4 cut(s) 112, 184, 956, 1092
BmiI GGNNCC 5 cut(s) 782, 958, 1011, 1094, 1159
BmrFI CCNGG 6 cut(s) 37, 215, 1097, 1334, 1692, 1874
BmsI GCATC 3 cut(s) 464, 1205, 1999
BmtI GCTAGC 1 cut(s) 1857
BoxI GACNNNNGTC 1 cut(s) 254
BpiI GAAGAC 2 cut(s) 254, 264
BplI GAGNNNNNCTC 2 cut(s) 695, 727
BpmI CTGGAG 3 cut(s) 1588, 1702, 2000
Bpu14I TTCGAA 2 cut(s) 125, 527
BpuEI CTTGAG 2 cut(s) 404, 1367
BpuMI CCSGG 4 cut(s) 37, 1334, 1692, 1874
BsaAI YACGTR 1 cut(s) 1352
BsaHI GRCGYC 1 cut(s) 288
BsaI GGTCTC 4 cut(s) 292, 835, 850, 1835
BsaJI CCNNGG 6 cut(s) 148, 213, 726, 1095, 1332, 1653
BsaWI WCCGGW 2 cut(s) 1006, 1535
BsaXI ACNNNNNCTCC 2 cut(s) 1672, 1702
Bsc4I CCNNNNNNNGG 5 cut(s) 660, 790, 867, 1206, 1538
Bse118I RCCGGY 1 cut(s) 1006
Bse1I ACTGG 3 cut(s) 136, 618, 1605
Bse3DI GCAATG 3 cut(s) 1136, 1236, 1443
BseBI CCWGG 2 cut(s) 215, 1097
BseDI CCNNGG 6 cut(s) 148, 213, 726, 1095, 1332, 1653
BseGI GGATG 3 cut(s) 511, 1196, 1532
BseLI CCNNNNNNNGG 5 cut(s) 660, 790, 867, 1206, 1538
BseMI GCAATG 3 cut(s) 1136, 1236, 1443
BseMII CTCAG 6 cut(s) 21, 598, 693, 846, 1161, 1627
BseNI ACTGG 3 cut(s) 136, 618, 1605
BseRI GAGGAG 1 cut(s) 673
BseXI GCAGC 5 cut(s) 481, 519, 1205, 1256, 1623
BsgI GTGCAG 1 cut(s) 1904
BshFI GGCC 4 cut(s) 114, 664, 758, 1304
BshNI GGYRCC 1 cut(s) 1009
BshTI ACCGGT 1 cut(s) 1006
BsiHKAI GWGCWC 2 cut(s) 332, 2016
BsiSI CCGG 7 cut(s) 14, 37, 1007, 1334, 1536, 1692, 1873
BslFI GGGAC 5 cut(s) 124, 411, 884, 1078, 1315
BslI CCNNNNNNNGG 5 cut(s) 660, 790, 867, 1206, 1538
BsmAI GTCTC 7 cut(s) 292, 835, 850, 989, 1290, 1616, 1835
BsmBI CGTCTC 1 cut(s) 1616
BsmFI GGGAC 5 cut(s) 124, 411, 884, 1078, 1315
BsnI GGCC 4 cut(s) 114, 664, 758, 1304
Bso31I GGTCTC 4 cut(s) 292, 835, 850, 1835
Bsp119I TTCGAA 2 cut(s) 125, 527
Bsp1286I GDGCHC 2 cut(s) 332, 2016
Bsp143I GATC 6 cut(s) 360, 607, 1075, 1408, 1435, 1960
BspACI CCGC 3 cut(s) 153, 351, 1241
BspANI GGCC 4 cut(s) 114, 664, 758, 1304
BspCNI CTCAG 6 cut(s) 20, 597, 694, 845, 1160, 1626
BspHI TCATGA 2 cut(s) 691, 2075
BspLI GGNNCC 5 cut(s) 782, 958, 1011, 1094, 1159
BspMAI CTGCAG 2 cut(s) 1554, 1970
BspMI ACCTGC 2 cut(s) 1769, 1876
BspOI GCTAGC 1 cut(s) 1857
BspPI GGATC 4 cut(s) 368, 602, 1416, 1968
BspT104I TTCGAA 2 cut(s) 125, 527
BspT107I GGYRCC 1 cut(s) 1009
BspTNI GGTCTC 4 cut(s) 292, 835, 850, 1835
BsrDI GCAATG 3 cut(s) 1136, 1236, 1443
BsrFI RCCGGY 1 cut(s) 1006
BsrI ACTGG 3 cut(s) 136, 618, 1605
BssAI RCCGGY 1 cut(s) 1006
BssECI CCNNGG 6 cut(s) 148, 213, 726, 1095, 1332, 1653
BssMI GATC 6 cut(s) 360, 607, 1075, 1408, 1435, 1960
BssNI GRCGYC 1 cut(s) 288
BssT1I CCWWGG 1 cut(s) 726
Bst2UI CCWGG 2 cut(s) 215, 1097
Bst4CI ACNGT 7 cut(s) 184, 262, 426, 903, 1347, 1483, 1508
Bst6I CTCTTC 3 cut(s) 35, 1398, 1614
BstACI GRCGYC 1 cut(s) 288
BstBAI YACGTR 1 cut(s) 1352
BstBI TTCGAA 2 cut(s) 125, 527
BstC8I GCNNGC 3 cut(s) 42, 1302, 1855
BstDEI CTNAG 8 cut(s) 7, 584, 702, 832, 1147, 1544, 1613, 1683
BstDSI CCRYGG 1 cut(s) 1653
BstF5I GGATG 3 cut(s) 511, 1196, 1532
BstH2I RGCGCY 2 cut(s) 212, 712
BstHHI GCGC 2 cut(s) 211, 711
BstKTI GATC 6 cut(s) 363, 610, 1078, 1411, 1438, 1963
BstMAI GTCTC 7 cut(s) 292, 835, 850, 989, 1290, 1616, 1835
BstMBI GATC 6 cut(s) 360, 607, 1075, 1408, 1435, 1960
BstMWI GCNNNNNNNGC 4 cut(s) 104, 348, 452, 1987
BstNI CCWGG 2 cut(s) 215, 1097
BstPAI GACNNNNGTC 1 cut(s) 254
BstSCI CCNGG 6 cut(s) 35, 213, 1095, 1332, 1690, 1872
BstSFI CTRYAG 2 cut(s) 1550, 1966
BstV1I GCAGC 5 cut(s) 481, 519, 1205, 1256, 1623
BstV2I GAAGAC 2 cut(s) 254, 264
BstX2I RGATCY 1 cut(s) 1960
BstXI CCANNNNNNTGG 1 cut(s) 1743
BstYI RGATCY 1 cut(s) 1960
BsuRI GGCC 4 cut(s) 114, 664, 758, 1304
BtgI CCRYGG 1 cut(s) 1653
BtgZI GCGATG 2 cut(s) 59, 1240
BtrI CACGTC 1 cut(s) 63
BtsCI GGATG 3 cut(s) 511, 1196, 1532
BtsI GCAGTG 1 cut(s) 1988
BtsIMutI CAGTG 7 cut(s) 15, 258, 507, 611, 840, 1621, 1988
BveI ACCTGC 2 cut(s) 1769, 1876
Cac8I GCNNGC 3 cut(s) 42, 1302, 1855
CciI TCATGA 2 cut(s) 691, 2075
CfoI GCGC 2 cut(s) 211, 711
Cfr10I RCCGGY 1 cut(s) 1006
Cfr13I GGNCC 4 cut(s) 112, 184, 956, 1092
Csp6I GTAC 4 cut(s) 699, 731, 1010, 1252
CspAI ACCGGT 1 cut(s) 1006
CspCI CAANNNNNGTGG 4 cut(s) 600, 635, 1151, 1186
CviAII CATG 8 cut(s) 401, 655, 692, 742, 809, 862, 1743, 2076
CviQI GTAC 4 cut(s) 699, 731, 1010, 1252
DdeI CTNAG 8 cut(s) 7, 584, 702, 832, 1147, 1544, 1613, 1683
DpnI GATC 6 cut(s) 362, 609, 1077, 1410, 1437, 1962
DpnII GATC 6 cut(s) 360, 607, 1075, 1408, 1435, 1960
DraI TTTAAA 1 cut(s) 1342
EaeI YGGCCR 1 cut(s) 1302
Eam1104I CTCTTC 3 cut(s) 35, 1398, 1614
EarI CTCTTC 3 cut(s) 35, 1398, 1614
Ecl136II GAGCTC 2 cut(s) 330, 2014
Eco130I CCWWGG 1 cut(s) 726
Eco24I GRGCYC 2 cut(s) 332, 2016
Eco31I GGTCTC 4 cut(s) 292, 835, 850, 1835
Eco47I GGWCC 3 cut(s) 184, 956, 1092
Eco53kI GAGCTC 2 cut(s) 330, 2014
Eco57I CTGAAG 2 cut(s) 1079, 1718
Eco72I CACGTG 1 cut(s) 1352
EcoICRI GAGCTC 2 cut(s) 330, 2014
EcoRII CCWGG 2 cut(s) 213, 1095
EcoT14I CCWWGG 1 cut(s) 726
EcoT22I ATGCAT 1 cut(s) 1913
EcoT38I GRGCYC 2 cut(s) 332, 2016
ErhI CCWWGG 1 cut(s) 726
Esp3I CGTCTC 1 cut(s) 1616
FaeI CATG 8 cut(s) 404, 658, 695, 745, 812, 865, 1746, 2079
FaqI GGGAC 5 cut(s) 124, 411, 884, 1078, 1315
FatI CATG 8 cut(s) 400, 654, 691, 741, 808, 861, 1742, 2075
FbaI TGATCA 1 cut(s) 1435
Fnu4HI GCNGC 7 cut(s) 154, 470, 533, 1194, 1242, 1245, 1637
FokI GGATG 3 cut(s) 518, 1183, 1519
FriOI GRGCYC 2 cut(s) 332, 2016
Fsp4HI GCNGC 7 cut(s) 154, 470, 533, 1194, 1242, 1245, 1637
FspBI CTAG 5 cut(s) 162, 447, 549, 1583, 1854
GlaI GCGC 2 cut(s) 210, 710
GluI GCNGC 7 cut(s) 154, 470, 533, 1194, 1242, 1245, 1637
GsuI CTGGAG 3 cut(s) 1588, 1702, 2000
HaeII RGCGCY 2 cut(s) 212, 712
HaeIII GGCC 4 cut(s) 114, 664, 758, 1304
HapII CCGG 7 cut(s) 14, 37, 1007, 1334, 1536, 1692, 1873
HhaI GCGC 2 cut(s) 211, 711
Hin1I GRCGYC 1 cut(s) 288
Hin1II CATG 8 cut(s) 404, 658, 695, 745, 812, 865, 1746, 2079
Hin6I GCGC 2 cut(s) 209, 709
HinP1I GCGC 2 cut(s) 209, 709
HincII GTYRAC 1 cut(s) 1504
HindII GTYRAC 1 cut(s) 1504
HindIII AAGCTT 1 cut(s) 407
HpaI GTTAAC 1 cut(s) 1504
HpaII CCGG 7 cut(s) 14, 37, 1007, 1334, 1536, 1692, 1873
Hpy166II GTNNAC 2 cut(s) 1004, 1504
Hpy188I TCNGA 9 cut(s) 132, 195, 297, 415, 1150, 1327, 1522, 1934, 2055
Hpy188III TCNNGA 9 cut(s) 383, 488, 605, 692, 1384, 1570, 1719, 2017, 2076
Hpy8I GTNNAC 2 cut(s) 1004, 1504
Hpy99I CGWCG 1 cut(s) 67
HpyAV CCTTC 4 cut(s) 1023, 1054, 1242, 2074
HpyCH4III ACNGT 7 cut(s) 184, 262, 426, 903, 1347, 1483, 1508
HpyCH4IV ACGT 4 cut(s) 62, 288, 557, 1351
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 348, 452, 1987
HpyF3I CTNAG 8 cut(s) 7, 584, 702, 832, 1147, 1544, 1613, 1683
HpySE526I ACGT 4 cut(s) 62, 288, 557, 1351
Hsp92I GRCGYC 1 cut(s) 288
Hsp92II CATG 8 cut(s) 404, 658, 695, 745, 812, 865, 1746, 2079
HspAI GCGC 2 cut(s) 209, 709
KpnI GGTACC 1 cut(s) 1013
Ksp22I TGATCA 1 cut(s) 1435
KspAI GTTAAC 1 cut(s) 1504
Kzo9I GATC 6 cut(s) 360, 607, 1075, 1408, 1435, 1960
LmnI GCTCC 7 cut(s) 327, 335, 716, 1607, 1978, 2011, 2019
Lsp1109I GCAGC 5 cut(s) 481, 519, 1205, 1256, 1623
LweI GCATC 3 cut(s) 464, 1205, 1999
MaeI CTAG 5 cut(s) 162, 447, 549, 1583, 1854
MaeII ACGT 4 cut(s) 62, 288, 557, 1351
MaeIII GTNAC 8 cut(s) 256, 284, 835, 897, 1047, 1347, 1352, 1757
MalI GATC 6 cut(s) 362, 609, 1077, 1410, 1437, 1962
MboI GATC 6 cut(s) 360, 607, 1075, 1408, 1435, 1960
MboII GAAGA 8 cut(s) 22, 259, 264, 1235, 1387, 1415, 1631, 1821
MfeI CAATTG 3 cut(s) 252, 824, 1168
MflI RGATCY 1 cut(s) 1960
MhlI GDGCHC 2 cut(s) 332, 2016
MlyI GAGTC 5 cut(s) 425, 1018, 1279, 1337, 1681
Mph1103I ATGCAT 1 cut(s) 1913
MseI TTAA 8 cut(s) 53, 941, 1044, 1317, 1341, 1503, 1905, 1914
MspA1I CMGCKG 1 cut(s) 1070
MspI CCGG 7 cut(s) 14, 37, 1007, 1334, 1536, 1692, 1873
MspR9I CCNGG 6 cut(s) 37, 215, 1097, 1334, 1692, 1874
MunI CAATTG 3 cut(s) 252, 824, 1168
MvaI CCWGG 2 cut(s) 215, 1097
MwoI GCNNNNNNNGC 4 cut(s) 104, 348, 452, 1987
NciI CCSGG 4 cut(s) 37, 1334, 1692, 1874
NdeII GATC 6 cut(s) 360, 607, 1075, 1408, 1435, 1960
NheI GCTAGC 1 cut(s) 1853
NlaIII CATG 8 cut(s) 404, 658, 695, 745, 812, 865, 1746, 2079
NlaIV GGNNCC 5 cut(s) 782, 958, 1011, 1094, 1159
NmeAIII GCCGAG 2 cut(s) 129, 368
NmuCI GTSAC 6 cut(s) 256, 284, 835, 1047, 1347, 1352
NsiI ATGCAT 1 cut(s) 1913
NspV TTCGAA 2 cut(s) 125, 527
PagI TCATGA 2 cut(s) 691, 2075
PaqCI CACCTGC 1 cut(s) 1769
PcsI WCGNNNNNNNCGW 1 cut(s) 233
PfeI GAWTC 9 cut(s) 101, 127, 224, 277, 365, 379, 1464, 1514, 1575
PflFI GACNNNGTC 1 cut(s) 182
PflMI CCANNNNNTGG 2 cut(s) 867, 1538
PfoI TCCNGGA 1 cut(s) 1690
PinAI ACCGGT 1 cut(s) 1006
PkrI GCNGC 7 cut(s) 155, 471, 534, 1195, 1243, 1246, 1638
PleI GAGTC 5 cut(s) 424, 1018, 1278, 1336, 1681
PmaCI CACGTG 1 cut(s) 1352
PmlI CACGTG 1 cut(s) 1352
PpsI GAGTC 5 cut(s) 424, 1018, 1278, 1336, 1681
Ppu21I YACGTR 1 cut(s) 1352
PshAI GACNNNNGTC 1 cut(s) 254
Psp124BI GAGCTC 2 cut(s) 332, 2016
Psp1406I AACGTT 1 cut(s) 557
Psp6I CCWGG 2 cut(s) 213, 1095
PspCI CACGTG 1 cut(s) 1352
PspGI CCWGG 2 cut(s) 213, 1095
PspN4I GGNNCC 5 cut(s) 782, 958, 1011, 1094, 1159
PspPI GGNCC 4 cut(s) 112, 184, 956, 1092
PstI CTGCAG 2 cut(s) 1554, 1970
PsuI RGATCY 1 cut(s) 1960
PsyI GACNNNGTC 1 cut(s) 182
PvuII CAGCTG 1 cut(s) 1070
RsaI GTAC 4 cut(s) 700, 732, 1011, 1253
RsaNI GTAC 4 cut(s) 699, 731, 1010, 1252
SacI GAGCTC 2 cut(s) 332, 2016
SaqAI TTAA 8 cut(s) 53, 941, 1044, 1317, 1341, 1503, 1905, 1914
SatI GCNGC 7 cut(s) 154, 470, 533, 1194, 1242, 1245, 1637
Sau3AI GATC 6 cut(s) 360, 607, 1075, 1408, 1435, 1960
Sau96I GGNCC 4 cut(s) 112, 184, 956, 1092
ScaI AGTACT 1 cut(s) 700
SchI GAGTC 5 cut(s) 425, 1018, 1279, 1337, 1681
ScrFI CCNGG 6 cut(s) 37, 215, 1097, 1334, 1692, 1874
SduI GDGCHC 2 cut(s) 332, 2016
SfaNI GCATC 3 cut(s) 464, 1205, 1999
SfcI CTRYAG 2 cut(s) 1550, 1966
SfuI TTCGAA 2 cut(s) 125, 527
SinI GGWCC 3 cut(s) 184, 956, 1092
SmlI CTYRAG 2 cut(s) 383, 1382
SmoI CTYRAG 2 cut(s) 383, 1382
SsiI CCGC 3 cut(s) 153, 351, 1241
SspMI CTAG 5 cut(s) 162, 447, 549, 1583, 1854
SstI GAGCTC 2 cut(s) 332, 2016
StyD4I CCNGG 6 cut(s) 35, 213, 1095, 1332, 1690, 1872
StyI CCWWGG 1 cut(s) 726
TaaI ACNGT 7 cut(s) 184, 262, 426, 903, 1347, 1483, 1508
TaiI ACGT 4 cut(s) 65, 291, 560, 1354
TaqI TCGA 6 cut(s) 125, 222, 275, 363, 527, 1074
TaqII GACCGA 2 cut(s) 38, 316
TatI WGTACW 1 cut(s) 698
TauI GCSGC 2 cut(s) 156, 1244
TfiI GAWTC 9 cut(s) 101, 127, 224, 277, 365, 379, 1464, 1514, 1575
Tru1I TTAA 8 cut(s) 53, 941, 1044, 1317, 1341, 1503, 1905, 1914
Tru9I TTAA 8 cut(s) 53, 941, 1044, 1317, 1341, 1503, 1905, 1914
TscAI CASTG 7 cut(s) 15, 265, 507, 618, 840, 1621, 1988
TseFI GTSAC 6 cut(s) 256, 284, 835, 1047, 1347, 1352
TseI GCWGC 5 cut(s) 469, 532, 1193, 1244, 1636
Tsp45I GTSAC 6 cut(s) 256, 284, 835, 1047, 1347, 1352
TspDTI ATGAA 9 cut(s) 324, 680, 1236, 1527, 1731, 1767, 1855, 1912, 2064
TspRI CASTG 7 cut(s) 15, 265, 507, 618, 840, 1621, 1988
Tth111I GACNNNGTC 1 cut(s) 182
Van91I CCANNNNNTGG 2 cut(s) 867, 1538
VpaK11BI GGWCC 3 cut(s) 184, 956, 1092
XapI RAATTY 1 cut(s) 1662
XspI CTAG 5 cut(s) 162, 447, 549, 1583, 1854
ZraI GACGTC 1 cut(s) 289
ZrmI AGTACT 1 cut(s) 700
Zsp2I ATGCAT 1 cut(s) 1913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.