Prupe.7G209900_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0012985
Physical Location & Seq
Forward (+)
19223664 .. 19226674
3011 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G209900.1

Sequence Viewer

Length: 2184 bp
ATGCTTCAATTTGGCGCGAACCCACATGACCGCCGGTTCTGGCCTCAGAGTCGGTCTCCCTCACCTCAGTTCATCATGACCACACTACCAGAAATAACCGATCTCTTCGCCAGGCTCGCTTCCCGCCTCAAATCCCTAAACGTCACGTCGTTTTCTCCTCACACTGCCAAAGAAGAACTTGACGAAGCAGCTCTGGACCTCTCTATTTCAAAGCTGAACCAATCTCTGAACCCTAACGGCAATTCTAGGGTTAGGGTTTTGGACACAGTCCTATCTCTAATGTGCTTCAAAGCTCCCCAGGTTTTCGATTCGGGCATTGAGTATTTAGTGAAGACAATTGTCACCGTTTTGTTGTCTTCCATTCGTTGCAAGGTCCTTCGATCTCCGAAAGATGAGATTTTGCTGATTGGAAGCTCGATTTCTCACCGGGATTGTGGGCATTTGATCGAAGCGGCTGCTGATATTCTTGAGAAATTGGTGGGACATGGTAAGCTTTCGGATTCTTTACTGTGTGCCATTGTAAGAGTTGTAAGTTCAGCATCATTGTACCGGCAGCTGTCAAGACCCGTTTTTGATGTAAAATCAGTGGATGTAAAAAAGACCTTGACTTCGAAGCTTCTCTGTTACTTTCCCAGAGAAAAATCCCTTGACAACAACAAAATACCATTCAGATTGCTGTTGTGGTATCTTGACCCGCTAATTTTGAAGCGCGATGTTTCAAACATTTTGCAAGAAACCATAGACAGGCCATTTCTTTGTTTGAGTAAGGAATTTCGTGAGAGTAATGATTGGCTCTCTGTTATCACATCCTTGGTACTTTCTCCCATTATGTTTGTTGAGGCCAGAGCTTTGCTGCACCGATGGTTTTTGGTCACGGGTCTGGCTTCTGTGCTTGAGCTTCTAATTCAATTGGTCGCAGTGGTATTAGATGTGGTTTCAAGACCAATGTTCTGGGACATATCACTGGAAGTGGGAGCAAAGTTGCAATTTTCTAATGCTTATTTCCCATACAACCAACGCTTGCTAAGGATCTTGACTGGACCCCTCTCCTACGAGGGTCTCCTACAATTAGTGCATGAGACAAATGAGCCAGTGCCTTGTGCCCAGAAACAACTTTGTCCAACTTTTAAGCCACCTGCAGTAAAGGTTTCAACAATCGATGACAAATCTCTCTGGTCCCTGGCCATCAACTTCCCAGACTGGTTCTACTTTGCTTCTGCATTGCTCTTCTCGGAGAAAACTTCTCATGACAGTTGTCATCCAGAATGCATATTGGGGGCATCCAAAGTCGGAAAAGCGCACCATGAAGAACTACCTTCTATTTCTGCAGCAAGGTACATTGCCTGGATTTTGAGTCCTGTTAGTAAATCTCACCAGGATTCGCTGGCTGATTGTTTGATTAAAACATCAGAGTCTTGGGCTTTTAAGCAATTTGGCTCAGGTTCCCATGAGAAAGAAACATACGGCTACAAGAAAATACTCAAGAAACAGAAATTCTGTGAAGAGGACTATAGTTCCCCAACAGAGTATGATTATCAAGCAGTTGCAGTCTGGCTCAGCAGGTTCAATACTATGTACACAAGGAATTGCAATGAAACTGTTAACAGTTCAACATCGCGTGAAACAAAACGACCCTGTGGTCATAGTCTGCAGCAAAATGTCCTGTTCCGGAGAATCCCACTAGGCATCTTGCTTGGTTGCCCTCATTATACCACTGAAGATGGATGTGAATTGCTGATGCATTATGCCACAACTAGTAGAATTTTTCAGTTGAGGGAAACTAACGCTACTGGATTGAAGCATGTAAAATGGAACTCCAAAGGGCATAGGAACTTAGTTACATGGAGTGATGAATGTAATGAAAGGGAAGCTACAGCAGGTGCCTGTCTTGTCTTCAGTTTAACTGATATTATAGAAAGTATGTCTGCTTCACTGTTCGAGACTGAAGAAGCTGGCGTAGACTTTCTCTGCCGGGTGAAAATGCGGATCAGCAAATACTTGATAAAATGCATCAAGAGGTTAATCCAACTCAAAATTGATGACAGAAATTGGGTTGTAATGGATTTCTGCCATAAATTGGAGAAGTGGAGGCATCAGGGACAAGAAGTATTAGAGCTCCACAAAGATTTAGATGATGTCATTCATGTATTGAGTCAGAGAACATGCTCTGTTTCATCAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

728

Amino Acids

82.68

Weight (kDa)

8.32

Isoelectric Point (pI)

48.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012985)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G60310 AT3G60310
fragaria_vesca FvH4_1g07420
malus_domestica MD02G1079300.v1.1
prunus_persica Prupe.7G209900_v2.0.a1
pyrus_communis pycom02g06310
rosa_chinensis RchiOBHm_Chr2g0093321
rosa_laevigata RLG00000016390
rosa_multiflora Rmu_sc0002089.1_g000004 Rmu_sc0005227.1_g000001 Rmu_ssc0000483.1_g000001
rosa_roxburghii Rroxscaffold_2G00148190
rosa_rugosa Rorug02G0034800
rosa_samantha Rh2AG080900 Rh2BG082000 Rh2CG084200 Rh2DG079900
rosa_wichuraiana Rw2G006590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1144, 1868
AasI GACNNNNNNGTC 1 cut(s) 1638
Acc36I ACCTGC 3 cut(s) 1144, 1551, 1868
AccB1I GGYRCC 1 cut(s) 1880
AccB7I CCANNNNNTGG 1 cut(s) 2077
AccI GTMKAC 1 cut(s) 1959
AccII CGCG 3 cut(s) 17, 711, 1618
AccIII TCCGGA 1 cut(s) 1668
AciI CCGC 5 cut(s) 31, 124, 452, 695, 1984
AclWI GGATC 2 cut(s) 1037, 1994
AcoI YGGCCR 1 cut(s) 1182
AcsI RAATTY 3 cut(s) 770, 1493, 1761
AcuI CTGAAG 3 cut(s) 1737, 1879, 1965
AfaI GTAC 4 cut(s) 548, 816, 1337, 1577
AfiI CCNNNNNNNGG 2 cut(s) 744, 2077
AhlI ACTAGT 1 cut(s) 1754
AjiI CACGTC 1 cut(s) 147
AjnI CCWGG 5 cut(s) 110, 297, 1179, 1343, 1374
Alw21I GWGCWC 1 cut(s) 2118
Alw26I GTCTC 4 cut(s) 60, 1064, 1073, 1934
AlwI GGATC 2 cut(s) 1037, 1994
Aor13HI TCCGGA 1 cut(s) 1668
AoxI GGCC 4 cut(s) 41, 746, 840, 1182
ApeKI GCWGC 6 cut(s) 188, 455, 553, 853, 1328, 1651
ApoI RAATTY 3 cut(s) 770, 1493, 1761
ArsI GACNNNNNNTTYG 2 cut(s) 592, 624
AspLEI GCGC 3 cut(s) 17, 711, 1300
AspS9I GGNCC 4 cut(s) 196, 373, 1040, 1176
AsuC2I CCSGG 2 cut(s) 428, 1973
AsuHPI GGTGA 5 cut(s) 54, 334, 416, 1364, 1987
AsuII TTCGAA 1 cut(s) 611
AvaII GGWCC 4 cut(s) 196, 373, 1040, 1176
BaeGI GKGCMC 1 cut(s) 1105
BalI TGGCCA 1 cut(s) 1184
BanI GGYRCC 1 cut(s) 1880
BanII GRGCYC 1 cut(s) 2118
BarI GAAGNNNNNNTAC 2 cut(s) 1912, 1944
BbsI GAAGAC 3 cut(s) 338, 348, 1885
Bbv12I GWGCWC 1 cut(s) 2118
BbvI GCAGC 6 cut(s) 200, 442, 565, 840, 1340, 1663
BccI CCATC 3 cut(s) 855, 1193, 1715
BceAI ACGGC 2 cut(s) 253, 1480
BcgI CGANNNNNNTGC 2 cut(s) 437, 471
BciT130I CCWGG 5 cut(s) 112, 299, 1181, 1345, 1376
BcnI CCSGG 2 cut(s) 428, 1973
BcoDI GTCTC 4 cut(s) 60, 1064, 1073, 1934
BcuI ACTAGT 1 cut(s) 1754
BfaI CTAG 3 cut(s) 246, 1682, 1755
BfmI CTRYAG 5 cut(s) 1137, 1326, 1510, 1649, 1872
BfuAI ACCTGC 3 cut(s) 1144, 1551, 1868
BisI GCNGC 7 cut(s) 189, 453, 456, 554, 854, 1329, 1652
BlpI GCTNAGC 1 cut(s) 1556
BlsI GCNGC 7 cut(s) 190, 454, 457, 555, 855, 1330, 1653
Bme1390I CCNGG 7 cut(s) 112, 299, 428, 1181, 1345, 1376, 1973
Bme18I GGWCC 4 cut(s) 196, 373, 1040, 1176
BmgBI CACGTC 1 cut(s) 147
BmgT120I GGNCC 4 cut(s) 196, 373, 1040, 1176
BmiI GGNNCC 4 cut(s) 1042, 1178, 1444, 1882
BmrFI CCNGG 7 cut(s) 112, 299, 428, 1181, 1345, 1376, 1973
BmsI GCATC 6 cut(s) 548, 1289, 1695, 1728, 2019, 2101
BoxI GACNNNNGTC 2 cut(s) 338, 1254
BpiI GAAGAC 3 cut(s) 338, 348, 1885
BplI GAGNNNNNCTC 2 cut(s) 40, 72
Bpu10I CCTNAGC 2 cut(s) 1025, 1438
Bpu1102I GCTNAGC 1 cut(s) 1556
Bpu14I TTCGAA 1 cut(s) 611
BpuEI CTTGAG 3 cut(s) 488, 914, 1466
BpuMI CCSGG 2 cut(s) 428, 1973
Bsa29I ATCGAT 1 cut(s) 1158
BsaI GGTCTC 2 cut(s) 60, 1064
BsaJI CCNNGG 3 cut(s) 297, 810, 1179
BsaWI WCCGGW 1 cut(s) 1668
Bsc4I CCNNNNNNNGG 2 cut(s) 744, 2077
Bse118I RCCGGY 2 cut(s) 33, 549
Bse1I ACTGG 5 cut(s) 969, 1042, 1091, 1205, 1795
Bse3DI GCAATG 3 cut(s) 1220, 1338, 1597
BseAI TCCGGA 1 cut(s) 1668
BseBI CCWGG 5 cut(s) 112, 299, 1181, 1345, 1376
BseCI ATCGAT 1 cut(s) 1158
BseDI CCNNGG 3 cut(s) 297, 810, 1179
BseGI GGATG 5 cut(s) 595, 806, 1258, 1280, 1730
BseLI CCNNNNNNNGG 2 cut(s) 744, 2077
BseMI GCAATG 3 cut(s) 1220, 1338, 1597
BseMII CTCAG 4 cut(s) 59, 80, 1452, 1570
BseNI ACTGG 5 cut(s) 969, 1042, 1091, 1205, 1795
BseRI GAGGAG 1 cut(s) 147
BseSI GKGCMC 1 cut(s) 1105
BseXI GCAGC 6 cut(s) 200, 442, 565, 840, 1340, 1663
BsgI GTGCAG 1 cut(s) 839
Bsh1236I CGCG 3 cut(s) 17, 711, 1618
BshFI GGCC 4 cut(s) 43, 748, 842, 1184
BshNI GGYRCC 1 cut(s) 1880
BshVI ATCGAT 1 cut(s) 1158
BsiHKAI GWGCWC 1 cut(s) 2118
BsiSI CCGG 5 cut(s) 34, 427, 550, 1669, 1972
BslFI GGGAC 4 cut(s) 495, 968, 1162, 2112
BslI CCNNNNNNNGG 2 cut(s) 744, 2077
BsmAI GTCTC 4 cut(s) 60, 1064, 1073, 1934
BsmFI GGGAC 4 cut(s) 495, 968, 1162, 2112
BsmI GAATGC 1 cut(s) 1271
BsnI GGCC 4 cut(s) 43, 748, 842, 1184
Bso31I GGTCTC 2 cut(s) 60, 1064
Bsp119I TTCGAA 1 cut(s) 611
Bsp1286I GDGCHC 2 cut(s) 1105, 2118
Bsp13I TCCGGA 1 cut(s) 1668
Bsp1407I TGTACA 1 cut(s) 1575
Bsp143I GATC 5 cut(s) 100, 380, 444, 1029, 1986
Bsp1720I GCTNAGC 1 cut(s) 1556
BspACI CCGC 5 cut(s) 31, 124, 452, 695, 1984
BspANI GGCC 4 cut(s) 43, 748, 842, 1184
BspCNI CTCAG 4 cut(s) 58, 79, 1451, 1569
BspDI ATCGAT 1 cut(s) 1158
BspEI TCCGGA 1 cut(s) 1668
BspFNI CGCG 3 cut(s) 17, 711, 1618
BspHI TCATGA 2 cut(s) 75, 1246
BspLI GGNNCC 4 cut(s) 1042, 1178, 1444, 1882
BspMAI CTGCAG 3 cut(s) 1141, 1330, 1653
BspMI ACCTGC 3 cut(s) 1144, 1551, 1868
BspPI GGATC 2 cut(s) 1037, 1994
BspQI GCTCTTC 1 cut(s) 1232
BspT104I TTCGAA 1 cut(s) 611
BspT107I GGYRCC 1 cut(s) 1880
BspTNI GGTCTC 2 cut(s) 60, 1064
BsrDI GCAATG 3 cut(s) 1220, 1338, 1597
BsrFI RCCGGY 2 cut(s) 33, 549
BsrGI TGTACA 1 cut(s) 1575
BsrI ACTGG 5 cut(s) 969, 1042, 1091, 1205, 1795
BssAI RCCGGY 2 cut(s) 33, 549
BssECI CCNNGG 3 cut(s) 297, 810, 1179
BssMI GATC 5 cut(s) 100, 380, 444, 1029, 1986
BssT1I CCWWGG 1 cut(s) 810
Bst2UI CCWGG 5 cut(s) 112, 299, 1181, 1345, 1376
Bst4CI ACNGT 7 cut(s) 268, 346, 510, 1253, 1600, 1607, 1935
Bst6I CTCTTC 3 cut(s) 110, 1232, 1497
BstAUI TGTACA 1 cut(s) 1575
BstBI TTCGAA 1 cut(s) 611
BstC8I GCNNGC 4 cut(s) 117, 1022, 1386, 1954
BstDEI CTNAG 6 cut(s) 45, 66, 1025, 1438, 1556, 1834
BstF5I GGATG 5 cut(s) 595, 806, 1258, 1280, 1730
BstFNI CGCG 3 cut(s) 17, 711, 1618
BstHHI GCGC 3 cut(s) 17, 711, 1300
BstKTI GATC 5 cut(s) 103, 383, 447, 1032, 1989
BstMAI GTCTC 4 cut(s) 60, 1064, 1073, 1934
BstMBI GATC 5 cut(s) 100, 380, 444, 1029, 1986
BstMWI GCNNNNNNNGC 1 cut(s) 116
BstNI CCWGG 5 cut(s) 112, 299, 1181, 1345, 1376
BstNSI RCATGY 2 cut(s) 1805, 2166
BstPAI GACNNNNGTC 2 cut(s) 338, 1254
BstSCI CCNGG 7 cut(s) 110, 297, 426, 1179, 1343, 1374, 1971
BstSFI CTRYAG 5 cut(s) 1137, 1326, 1510, 1649, 1872
BstSLI GKGCMC 1 cut(s) 1105
BstUI CGCG 3 cut(s) 17, 711, 1618
BstV1I GCAGC 6 cut(s) 200, 442, 565, 840, 1340, 1663
BstV2I GAAGAC 3 cut(s) 338, 348, 1885
BstX2I RGATCY 1 cut(s) 1029
BstXI CCANNNNNNTGG 1 cut(s) 951
BstYI RGATCY 1 cut(s) 1029
Bsu15I ATCGAT 1 cut(s) 1158
BsuRI GGCC 4 cut(s) 43, 748, 842, 1184
BsuTUI ATCGAT 1 cut(s) 1158
BtgZI GCGATG 2 cut(s) 726, 1599
BtrI CACGTC 1 cut(s) 147
BtsCI GGATG 5 cut(s) 595, 806, 1258, 1280, 1730
BtsI GCAGTG 2 cut(s) 162, 924
BtsIMutI CAGTG 7 cut(s) 162, 591, 924, 962, 1098, 1713, 1931
BveI ACCTGC 3 cut(s) 1144, 1551, 1868
Cac8I GCNNGC 4 cut(s) 117, 1022, 1386, 1954
CciI TCATGA 2 cut(s) 75, 1246
CfoI GCGC 3 cut(s) 17, 711, 1300
Cfr10I RCCGGY 2 cut(s) 33, 549
Cfr13I GGNCC 4 cut(s) 196, 373, 1040, 1176
ClaI ATCGAT 1 cut(s) 1158
Csp6I GTAC 4 cut(s) 547, 815, 1336, 1576
CviQI GTAC 4 cut(s) 547, 815, 1336, 1576
DdeI CTNAG 6 cut(s) 45, 66, 1025, 1438, 1556, 1834
DpnI GATC 5 cut(s) 102, 382, 446, 1031, 1988
DpnII GATC 5 cut(s) 100, 380, 444, 1029, 1986
DrdI GACNNNNNNGTC 1 cut(s) 1638
DseDI GACNNNNNNGTC 1 cut(s) 1638
EaeI YGGCCR 1 cut(s) 1182
Eam1104I CTCTTC 3 cut(s) 110, 1232, 1497
EarI CTCTTC 3 cut(s) 110, 1232, 1497
Ecl136II GAGCTC 1 cut(s) 2116
Eco130I CCWWGG 1 cut(s) 810
Eco24I GRGCYC 1 cut(s) 2118
Eco31I GGTCTC 2 cut(s) 60, 1064
Eco47I GGWCC 4 cut(s) 196, 373, 1040, 1176
Eco53kI GAGCTC 1 cut(s) 2116
Eco57I CTGAAG 3 cut(s) 1737, 1879, 1965
EcoICRI GAGCTC 1 cut(s) 2116
EcoO109I RGGNCCY 1 cut(s) 373
EcoRII CCWGG 5 cut(s) 110, 297, 1179, 1343, 1374
EcoT14I CCWWGG 1 cut(s) 810
EcoT22I ATGCAT 3 cut(s) 1271, 1743, 2012
EcoT38I GRGCYC 1 cut(s) 2118
ErhI CCWWGG 1 cut(s) 810
FalI AAGNNNNNCTT 2 cut(s) 162, 194
FaqI GGGAC 4 cut(s) 495, 968, 1162, 2112
FauI CCCGC 2 cut(s) 131, 702
FblI GTMKAC 1 cut(s) 1959
Fnu4HI GCNGC 7 cut(s) 189, 453, 456, 554, 854, 1329, 1652
FokI GGATG 5 cut(s) 602, 793, 1245, 1267, 1737
FriOI GRGCYC 1 cut(s) 2118
Fsp4HI GCNGC 7 cut(s) 189, 453, 456, 554, 854, 1329, 1652
FspBI CTAG 3 cut(s) 246, 1682, 1755
GlaI GCGC 3 cut(s) 16, 710, 1299
GluI GCNGC 7 cut(s) 189, 453, 456, 554, 854, 1329, 1652
HaeIII GGCC 4 cut(s) 43, 748, 842, 1184
HapII CCGG 5 cut(s) 34, 427, 550, 1669, 1972
HhaI GCGC 3 cut(s) 17, 711, 1300
Hin6I GCGC 3 cut(s) 15, 709, 1298
HinP1I GCGC 3 cut(s) 15, 709, 1298
HincII GTYRAC 1 cut(s) 1603
HindII GTYRAC 1 cut(s) 1603
HindIII AAGCTT 2 cut(s) 491, 614
HinfI GANTC 8 cut(s) 49, 308, 500, 1354, 1379, 1412, 1674, 2152
HpaI GTTAAC 1 cut(s) 1603
HpaII CCGG 5 cut(s) 34, 427, 550, 1669, 1972
HphI GGTGA 5 cut(s) 54, 334, 416, 1364, 1987
Hpy166II GTNNAC 3 cut(s) 1578, 1603, 1960
Hpy188I TCNGA 9 cut(s) 48, 228, 387, 499, 671, 1234, 1292, 1411, 2157
Hpy8I GTNNAC 3 cut(s) 1578, 1603, 1960
Hpy99I CGWCG 1 cut(s) 151
HpyAV CCTTC 2 cut(s) 386, 1326
HpyCH4III ACNGT 7 cut(s) 268, 346, 510, 1253, 1600, 1607, 1935
HpyCH4IV ACGT 2 cut(s) 141, 146
HpyF10VI GCNNNNNNNGC 1 cut(s) 116
HpyF3I CTNAG 6 cut(s) 45, 66, 1025, 1438, 1556, 1834
HpySE526I ACGT 2 cut(s) 141, 146
HspAI GCGC 3 cut(s) 15, 709, 1298
Kpn2I TCCGGA 1 cut(s) 1668
KspAI GTTAAC 1 cut(s) 1603
Kzo9I GATC 5 cut(s) 100, 380, 444, 1029, 1986
LguI GCTCTTC 1 cut(s) 1232
LmnI GCTCC 3 cut(s) 298, 974, 2121
Lsp1109I GCAGC 6 cut(s) 200, 442, 565, 840, 1340, 1663
LweI GCATC 6 cut(s) 548, 1289, 1695, 1728, 2019, 2101
MaeI CTAG 3 cut(s) 246, 1682, 1755
MaeII ACGT 2 cut(s) 141, 146
MaeIII GTNAC 5 cut(s) 142, 340, 623, 871, 1837
MalI GATC 5 cut(s) 102, 382, 446, 1031, 1988
MboI GATC 5 cut(s) 100, 380, 444, 1029, 1986
MfeI CAATTG 2 cut(s) 336, 908
MflI RGATCY 1 cut(s) 1029
MhlI GDGCHC 2 cut(s) 1105, 2118
MlsI TGGCCA 1 cut(s) 1184
MluNI TGGCCA 1 cut(s) 1184
MlyI GAGTC 4 cut(s) 58, 1363, 1421, 2161
MmeI TCCRAC 3 cut(s) 1145, 1270, 2050
Mox20I TGGCCA 1 cut(s) 1184
Mph1103I ATGCAT 3 cut(s) 1271, 1743, 2012
MroI TCCGGA 1 cut(s) 1668
MscI TGGCCA 1 cut(s) 1184
MseI TTAA 6 cut(s) 1128, 1401, 1425, 1602, 1901, 2021
MslI CAYNNNNRTG 1 cut(s) 2179
Msp20I TGGCCA 1 cut(s) 1184
MspA1I CMGCKG 1 cut(s) 556
MspI CCGG 5 cut(s) 34, 427, 550, 1669, 1972
MspR9I CCNGG 7 cut(s) 112, 299, 428, 1181, 1345, 1376, 1973
MunI CAATTG 2 cut(s) 336, 908
Mva1269I GAATGC 1 cut(s) 1271
MvaI CCWGG 5 cut(s) 112, 299, 1181, 1345, 1376
MvnI CGCG 3 cut(s) 17, 711, 1618
MwoI GCNNNNNNNGC 1 cut(s) 116
NciI CCSGG 2 cut(s) 428, 1973
NdeII GATC 5 cut(s) 100, 380, 444, 1029, 1986
NlaIV GGNNCC 4 cut(s) 1042, 1178, 1444, 1882
NmuCI GTSAC 3 cut(s) 142, 340, 871
NsiI ATGCAT 3 cut(s) 1271, 1743, 2012
NspI RCATGY 2 cut(s) 1805, 2166
NspV TTCGAA 1 cut(s) 611
PagI TCATGA 2 cut(s) 75, 1246
PaqCI CACCTGC 2 cut(s) 1144, 1868
PciSI GCTCTTC 1 cut(s) 1232
PctI GAATGC 1 cut(s) 1271
PfeI GAWTC 4 cut(s) 308, 500, 1379, 1674
PflFI GACNNNGTC 1 cut(s) 266
PflMI CCANNNNNTGG 1 cut(s) 2077
PkrI GCNGC 7 cut(s) 190, 454, 457, 555, 855, 1330, 1653
PleI GAGTC 4 cut(s) 57, 1362, 1420, 2160
PpsI GAGTC 4 cut(s) 57, 1362, 1420, 2160
PpuMI RGGWCCY 1 cut(s) 373
PshAI GACNNNNGTC 2 cut(s) 338, 1254
Psp124BI GAGCTC 1 cut(s) 2118
Psp5II RGGWCCY 1 cut(s) 373
Psp6I CCWGG 5 cut(s) 110, 297, 1179, 1343, 1374
PspGI CCWGG 5 cut(s) 110, 297, 1179, 1343, 1374
PspN4I GGNNCC 4 cut(s) 1042, 1178, 1444, 1882
PspPI GGNCC 4 cut(s) 196, 373, 1040, 1176
PspPPI RGGWCCY 1 cut(s) 373
PstI CTGCAG 3 cut(s) 1141, 1330, 1653
PsuI RGATCY 1 cut(s) 1029
PsyI GACNNNGTC 1 cut(s) 266
PvuII CAGCTG 1 cut(s) 556
RsaI GTAC 4 cut(s) 548, 816, 1337, 1577
RsaNI GTAC 4 cut(s) 547, 815, 1336, 1576
RseI CAYNNNNRTG 1 cut(s) 2179
SacI GAGCTC 1 cut(s) 2118
SapI GCTCTTC 1 cut(s) 1232
SaqAI TTAA 6 cut(s) 1128, 1401, 1425, 1602, 1901, 2021
SatI GCNGC 7 cut(s) 189, 453, 456, 554, 854, 1329, 1652
Sau3AI GATC 5 cut(s) 100, 380, 444, 1029, 1986
Sau96I GGNCC 4 cut(s) 196, 373, 1040, 1176
SchI GAGTC 4 cut(s) 58, 1363, 1421, 2161
ScrFI CCNGG 7 cut(s) 112, 299, 428, 1181, 1345, 1376, 1973
SduI GDGCHC 2 cut(s) 1105, 2118
SfaNI GCATC 6 cut(s) 548, 1289, 1695, 1728, 2019, 2101
SfcI CTRYAG 5 cut(s) 1137, 1326, 1510, 1649, 1872
SfuI TTCGAA 1 cut(s) 611
SinI GGWCC 4 cut(s) 196, 373, 1040, 1176
SmiMI CAYNNNNRTG 1 cut(s) 2179
SmlI CTYRAG 3 cut(s) 467, 893, 1481
SmoI CTYRAG 3 cut(s) 467, 893, 1481
SpeI ACTAGT 1 cut(s) 1754
SsiI CCGC 5 cut(s) 31, 124, 452, 695, 1984
SspMI CTAG 3 cut(s) 246, 1682, 1755
SstI GAGCTC 1 cut(s) 2118
StyD4I CCNGG 7 cut(s) 110, 297, 426, 1179, 1343, 1374, 1971
StyI CCWWGG 1 cut(s) 810
TaaI ACNGT 7 cut(s) 268, 346, 510, 1253, 1600, 1607, 1935
TaiI ACGT 2 cut(s) 144, 149
TaqI TCGA 7 cut(s) 306, 379, 416, 447, 611, 1158, 1938
TaqII GACCGA 1 cut(s) 42
TatI WGTACW 1 cut(s) 1575
TauI GCSGC 1 cut(s) 455
TfiI GAWTC 4 cut(s) 308, 500, 1379, 1674
Tru1I TTAA 6 cut(s) 1128, 1401, 1425, 1602, 1901, 2021
Tru9I TTAA 6 cut(s) 1128, 1401, 1425, 1602, 1901, 2021
TscAI CASTG 7 cut(s) 169, 591, 924, 969, 1098, 1720, 1938
TseFI GTSAC 3 cut(s) 142, 340, 871
TseI GCWGC 6 cut(s) 188, 455, 553, 853, 1328, 1651
Tsp45I GTSAC 3 cut(s) 142, 340, 871
TspDTI ATGAA 7 cut(s) 61, 1320, 1608, 1866, 1875, 2132, 2163
TspRI CASTG 7 cut(s) 169, 591, 924, 969, 1098, 1720, 1938
Tth111I GACNNNGTC 1 cut(s) 266
Van91I CCANNNNNTGG 1 cut(s) 2077
VpaK11BI GGWCC 4 cut(s) 196, 373, 1040, 1176
XapI RAATTY 3 cut(s) 770, 1493, 1761
XceI RCATGY 2 cut(s) 1805, 2166
XmiI GTMKAC 1 cut(s) 1959
XspI CTAG 3 cut(s) 246, 1682, 1755
Zsp2I ATGCAT 3 cut(s) 1271, 1743, 2012
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.