AT3G63080

Belongs to the glutathione peroxidase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
23309737 .. 23311397
1661 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G63080.1

Sequence Viewer

Length: 522 bp
ATGGGTGCTTCATCATCATCATCTGTGTCGGAGAAATCAATCCATCAATTCACCGTCAAGGATAGCTCCGGCAAGGAGGTTGACCTAAGCGTGTATCAAGGGAAAGTGCTGCTCGTCGTCAACGTCGCTTCTAAATGCGGATTCACGGAGTCCAATTACACCCAGCTGACGGAACTTTACCGGAAATATAAAGATCAAGGTTTTGTGGTATTGGCGTTTCCTTGCAACCAGTTTCTGTCCCAAGAGCCTGGCACCAGCGAAGAGGCTCATCAATTTGCTTGTACTCGCTTTAAGGCTGAATACCCTGTTTTCCAAAAGGTGCGTGTAAATGGACAAAACGCTGCACCAGTCTACAAATTCCTCAAATCTAAGAAACCCTCTTTTCTTGGAAGTCGTATCAAATGGAACTTCACCAAGTTCTTGGTCGGCAAAGATGGTCAAGTCATTGATCGTTATGGCACAACTGTTTCACCTCTATCCATCCAGAAAGACATCGAGAAAGCCCTTGCACAAGAATTGTGA

Protein Analysis

173

Amino Acids

19.33

Weight (kDa)

9.28

Isoelectric Point (pI)

30.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Redoxin PF08534 13 - 73 1.2e-06 Redoxin
GSHPx PF00255 14 - 122 3.3e-41 Glutathione peroxidase
AhpC-TSA PF00578 14 - 77 2.6e-07 AhpC/TSA family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013809)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 251
AccI GTMKAC 1 cut(s) 351
AciI CCGC 1 cut(s) 138
AcsI RAATTY 1 cut(s) 356
AfaI GTAC 1 cut(s) 283
AfiI CCNNNNNNNGG 1 cut(s) 169
AjnI CCWGG 1 cut(s) 247
AluBI AGCT 2 cut(s) 66, 166
AluI AGCT 2 cut(s) 66, 166
AlwNI CAGNNNCTG 1 cut(s) 235
ApeKI GCWGC 2 cut(s) 109, 341
ApoI RAATTY 1 cut(s) 356
AsuHPI GGTGA 3 cut(s) 43, 403, 462
BanI GGYRCC 1 cut(s) 251
BbvI GCAGC 2 cut(s) 96, 328
BccI CCATC 3 cut(s) 51, 428, 488
BciT130I CCWGG 1 cut(s) 249
BisI GCNGC 2 cut(s) 110, 342
BlsI GCNGC 2 cut(s) 111, 343
Bme1390I CCNGG 1 cut(s) 249
BmiI GGNNCC 1 cut(s) 253
BmrFI CCNGG 1 cut(s) 249
Bpu10I CCTNAGC 1 cut(s) 86
BsaWI WCCGGW 1 cut(s) 180
Bsc4I CCNNNNNNNGG 1 cut(s) 169
Bse1I ACTGG 2 cut(s) 229, 347
BseBI CCWGG 1 cut(s) 249
BseGI GGATG 1 cut(s) 480
BseLI CCNNNNNNNGG 1 cut(s) 169
BseNI ACTGG 2 cut(s) 229, 347
BseXI GCAGC 2 cut(s) 96, 328
BseYI CCCAGC 1 cut(s) 162
BsgI GTGCAG 1 cut(s) 327
BshNI GGYRCC 1 cut(s) 251
BsiSI CCGG 2 cut(s) 69, 181
BslFI GGGAC 1 cut(s) 223
BslI CCNNNNNNNGG 1 cut(s) 169
BsmFI GGGAC 1 cut(s) 223
Bsp143I GATC 2 cut(s) 193, 448
BspACI CCGC 1 cut(s) 138
BspLI GGNNCC 1 cut(s) 253
BspT107I GGYRCC 1 cut(s) 251
BsrI ACTGG 2 cut(s) 229, 347
BssMI GATC 2 cut(s) 193, 448
Bst2UI CCWGG 1 cut(s) 249
Bst4CI ACNGT 2 cut(s) 55, 466
Bst6I CTCTTC 1 cut(s) 255
BstDEI CTNAG 2 cut(s) 86, 369
BstF5I GGATG 1 cut(s) 480
BstKTI GATC 2 cut(s) 196, 451
BstMBI GATC 2 cut(s) 193, 448
BstNI CCWGG 1 cut(s) 249
BstSCI CCNGG 1 cut(s) 247
BstV1I GCAGC 2 cut(s) 96, 328
BstXI CCANNNNNNTGG 2 cut(s) 248, 421
BtsCI GGATG 1 cut(s) 480
CaiI CAGNNNCTG 1 cut(s) 235
Csp6I GTAC 1 cut(s) 282
CviJI RGCY 6 cut(s) 66, 166, 247, 266, 296, 503
CviKI_1 RGCY 6 cut(s) 66, 166, 247, 266, 296, 503
CviQI GTAC 1 cut(s) 282
DdeI CTNAG 2 cut(s) 86, 369
DpnI GATC 2 cut(s) 195, 450
DpnII GATC 2 cut(s) 193, 448
Eam1104I CTCTTC 1 cut(s) 255
EarI CTCTTC 1 cut(s) 255
EcoRII CCWGG 1 cut(s) 247
FaiI YATR 2 cut(s) 189, 456
FaqI GGGAC 1 cut(s) 223
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 2 cut(s) 110, 342
FokI GGATG 1 cut(s) 467
Fsp4HI GCNGC 2 cut(s) 110, 342
GluI GCNGC 2 cut(s) 110, 342
GsaI CCCAGC 1 cut(s) 166
HapII CCGG 2 cut(s) 69, 181
HincII GTYRAC 2 cut(s) 82, 121
HindII GTYRAC 2 cut(s) 82, 121
HinfI GANTC 2 cut(s) 141, 149
HpaII CCGG 2 cut(s) 69, 181
HphI GGTGA 3 cut(s) 43, 403, 462
Hpy166II GTNNAC 3 cut(s) 82, 121, 352
Hpy188I TCNGA 1 cut(s) 31
Hpy188III TCNNGA 2 cut(s) 484, 496
Hpy8I GTNNAC 3 cut(s) 82, 121, 352
Hpy99I CGWCG 2 cut(s) 119, 128
HpyCH4III ACNGT 2 cut(s) 55, 466
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 3 cut(s) 225, 344, 509
HpyF3I CTNAG 2 cut(s) 86, 369
HpySE526I ACGT 1 cut(s) 123
Kzo9I GATC 2 cut(s) 193, 448
LmnI GCTCC 1 cut(s) 71
Lsp1109I GCAGC 2 cut(s) 96, 328
MaeII ACGT 1 cut(s) 123
MalI GATC 2 cut(s) 195, 450
MboI GATC 2 cut(s) 193, 448
MboII GAAGA 1 cut(s) 272
MluCI AATT 5 cut(s) 47, 154, 272, 356, 515
MlyI GAGTC 1 cut(s) 158
MmeI TCCRAC 1 cut(s) 9
MnlI CCTC 5 cut(s) 70, 256, 371, 388, 483
MseI TTAA 1 cut(s) 291
MspA1I CMGCKG 1 cut(s) 166
MspI CCGG 2 cut(s) 69, 181
MspR9I CCNGG 1 cut(s) 249
MvaI CCWGG 1 cut(s) 249
NdeII GATC 2 cut(s) 193, 448
NlaIV GGNNCC 1 cut(s) 253
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PfeI GAWTC 1 cut(s) 141
PkrI GCNGC 2 cut(s) 111, 343
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
Psp6I CCWGG 1 cut(s) 247
PspFI CCCAGC 1 cut(s) 162
PspGI CCWGG 1 cut(s) 247
PspN4I GGNNCC 1 cut(s) 253
PstNI CAGNNNCTG 1 cut(s) 235
PvuII CAGCTG 1 cut(s) 166
RsaI GTAC 1 cut(s) 283
RsaNI GTAC 1 cut(s) 282
SaqAI TTAA 1 cut(s) 291
SatI GCNGC 2 cut(s) 110, 342
Sau3AI GATC 2 cut(s) 193, 448
SchI GAGTC 1 cut(s) 158
ScrFI CCNGG 1 cut(s) 249
SetI ASST 8 cut(s) 68, 81, 87, 126, 168, 202, 321, 475
Sse9I AATT 5 cut(s) 47, 154, 272, 356, 515
SsiI CCGC 1 cut(s) 138
StyD4I CCNGG 1 cut(s) 247
TaaI ACNGT 2 cut(s) 55, 466
TaiI ACGT 1 cut(s) 126
TaqI TCGA 1 cut(s) 495
TasI AATT 5 cut(s) 47, 154, 272, 356, 515
TatI WGTACW 1 cut(s) 281
TfiI GAWTC 1 cut(s) 141
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
TseI GCWGC 2 cut(s) 109, 341
TspGWI ACGGA 2 cut(s) 161, 185
XapI RAATTY 1 cut(s) 356
XmiI GTMKAC 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.