AT3G63480
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
23440887 .. 23444088
3202 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G63480.1

Sequence Viewer

Length: 1410 bp
ATGTCTAACGTAACCGTCTGTGCGCGATTCAGGCCGCGAAGCTCTAAAGAGATGCGCGATCCCAGCAGAGATGGTGTCTGTGCTCGACCCATCGACGCTGAAACCTTCGTTTTCCAAGATGACAAGGAAGATGAATTTACATTTAGCCTCGATAGAGTTTTTTATGAGGACTCTACCCAAGCTGCGGTTTATGAGTTTCTGGCTCTCCCCATCATGAGAGACGCTGTAAATGGTATAAACGGAACAATCATCACTTATGGACAGACAGGGGCTGGGAAGACTTATTCCATGGAGGGACCAGGCATCCAGGACTGTGATGAGCACAATAAAGGACTTCTTCCAAGAGTGGTCCATGGGATGTTTGAGCAAATCAGCTCTTCCAATGATATTGCAAGATACACTGTTAAATTGTCTATGGTTGAGATCTACATGGAGAAAGTCAGGGACCTGTTGGACTTATCAAAAGCAAACATACAGATCAAGGAGAACAAAACACAAGGAATACTCTTGTCAGGCGTTACAGAGGCTAGCTTCATTGTGCCTGTATCAGATTCGGTGGAGGCATTACAACATCTATGCACCGGTTTAGCTAACCGCGCAGTTGGGGAAACCCAAATGAATATGTCCAGCAGTAGAAGCCACTGCGCCTACTTGTTCACAATCCAGCAGGATTCAGTTAAAGATAAAAGGGTAAAAACAGGAAAACTGATTCTTGTCGACCTGGCTGGCTCAGAGAAAGCAGACAAAACTGGAGCAGAAGGTAGGGTTCTTGAAGAAGCGAAGACGATCAATAAATCGCTCTCAGCCTTGGGGAACGTGATAAACGCTCTCACTAGTGGGCCATCTAGCAAAGGGAATCACATACCATATCGTGACTCCAAGCTTACTCGCATCTTACAGGATGCCCTGGGTGGAAATTCTCGAATGGCGCTGCTTTGCTGTTGCTCACCAAGCACTTTAAATGCATCTGAGACGCTCTCAACTCTCAGGTTTGGCATGAGGGCAAAACACATAAAAGCATCACCACGTGCTAGTGAAGTGAAATCTGCGAAGGCACAGGAGGAACCCTCCTCGGTTACCAAAGATGAAAAATGTGGGAGGATCCTAGAAAAGATGAAAGAGAGGATGAGCAACGAAGACATCAAAATGCTAGAAGATGTGTTTATACAGGAAGGGATCATTTTCAGCCTAGATTCGATGGCTGAAGTGGAAACCGTATACGAAGATATTGTATCAAAAACTATACAATCCTTACAGCAGGCTGTTGATGAACTCCAACAGAAAGTCAAAAAGTTAGAAGCAGAAAACATAGGTATTCAGGAACAAGCATTGCGCAATCACGAACCTGGTTCGGTCGGAAAGATGTCAAGGTTCATCAGTTCTTGGTATGCATCGTTCTTTACGTCCTAA

Protein Analysis

469

Amino Acids

51.83

Weight (kDa)

5.82

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 6 - 151 2.4e-19 Microtubule binding
Kinesin PF00225 9 - 338 1e-100 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011695)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1334
AccI GTMKAC 2 cut(s) 717, 1218
AccII CGCG 4 cut(s) 25, 37, 57, 597
AciI CCGC 3 cut(s) 35, 185, 595
AclWI GGATC 4 cut(s) 53, 1096, 1109, 1184
AcsI RAATTY 2 cut(s) 134, 916
AcuI CTGAAG 1 cut(s) 1224
AcvI CACGTG 1 cut(s) 1028
AdeI CACNNNGTG 1 cut(s) 1028
AfiI CCNNNNNNNGG 1 cut(s) 184
AgeI ACCGGT 1 cut(s) 581
AgsI TTSAA 1 cut(s) 773
AhlI ACTAGT 1 cut(s) 833
AjnI CCWGG 5 cut(s) 298, 306, 720, 906, 1345
AluBI AGCT 6 cut(s) 42, 182, 375, 531, 590, 883
AluI AGCT 6 cut(s) 42, 182, 375, 531, 590, 883
Alw21I GWGCWC 2 cut(s) 85, 324
Alw26I GTCTC 2 cut(s) 213, 965
AlwI GGATC 4 cut(s) 53, 1096, 1109, 1184
AlwNI CAGNNNCTG 1 cut(s) 272
AoxI GGCC 2 cut(s) 32, 839
ApeKI GCWGC 2 cut(s) 182, 931
ApoI RAATTY 2 cut(s) 134, 916
AsiGI ACCGGT 1 cut(s) 581
AspLEI GCGC 6 cut(s) 25, 57, 599, 647, 931, 1335
AspS9I GGNCC 4 cut(s) 296, 349, 445, 839
AsuHPI GGTGA 2 cut(s) 939, 1014
AsuNHI GCTAGC 1 cut(s) 527
AvaII GGWCC 3 cut(s) 296, 349, 445
BamHI GGATCC 1 cut(s) 1101
BbrPI CACGTG 1 cut(s) 1028
BbsI GAAGAC 3 cut(s) 284, 788, 1143
Bbv12I GWGCWC 2 cut(s) 85, 324
BbvI GCAGC 2 cut(s) 169, 918
BccI CCATC 5 cut(s) 65, 98, 218, 850, 1192
BciT130I CCWGG 5 cut(s) 300, 308, 722, 908, 1347
BcoDI GTCTC 2 cut(s) 213, 965
BcuI ACTAGT 1 cut(s) 833
BfaI CTAG 7 cut(s) 528, 834, 846, 1032, 1106, 1151, 1190
BfoI RGCGCY 1 cut(s) 932
BglII AGATCT 1 cut(s) 423
BisI GCNGC 3 cut(s) 35, 183, 932
BlsI GCNGC 3 cut(s) 36, 184, 933
Bme1390I CCNGG 5 cut(s) 300, 308, 722, 908, 1347
Bme18I GGWCC 3 cut(s) 296, 349, 445
BmgT120I GGNCC 4 cut(s) 296, 349, 445, 839
BmiI GGNNCC 4 cut(s) 297, 446, 1065, 1103
BmrFI CCNGG 5 cut(s) 300, 308, 722, 908, 1347
BmsI GCATC 7 cut(s) 42, 312, 892, 900, 974, 1028, 1400
BmtI GCTAGC 1 cut(s) 531
BpiI GAAGAC 3 cut(s) 284, 788, 1143
BplI GAGNNNNNCTC 4 cut(s) 962, 994, 1052, 1084
BpmI CTGGAG 1 cut(s) 771
BsaAI YACGTR 1 cut(s) 1028
BsaJI CCNNGG 6 cut(s) 288, 352, 807, 906, 907, 1071
BsaWI WCCGGW 1 cut(s) 581
Bsc4I CCNNNNNNNGG 1 cut(s) 184
Bse118I RCCGGY 1 cut(s) 581
Bse1I ACTGG 1 cut(s) 754
Bse3DI GCAATG 1 cut(s) 1328
BseBI CCWGG 5 cut(s) 300, 308, 722, 908, 1347
BseDI CCNNGG 6 cut(s) 288, 352, 807, 906, 907, 1071
BseGI GGATG 4 cut(s) 303, 363, 907, 1131
BseLI CCNNNNNNNGG 1 cut(s) 184
BseMI GCAATG 1 cut(s) 1328
BseMII CTCAG 4 cut(s) 744, 816, 960, 1000
BseNI ACTGG 1 cut(s) 754
BseRI GAGGAG 1 cut(s) 1060
BseXI GCAGC 2 cut(s) 169, 918
BseYI CCCAGC 2 cut(s) 62, 272
Bsh1236I CGCG 4 cut(s) 25, 37, 57, 597
Bsh1285I CGRYCG 1 cut(s) 1356
BshFI GGCC 2 cut(s) 34, 841
BshTI ACCGGT 1 cut(s) 581
BsiEI CGRYCG 1 cut(s) 1356
BsiHKAI GWGCWC 2 cut(s) 85, 324
BsiSI CCGG 1 cut(s) 582
BslFI GGGAC 2 cut(s) 309, 458
BslI CCNNNNNNNGG 1 cut(s) 184
BsmAI GTCTC 2 cut(s) 213, 965
BsmBI CGTCTC 2 cut(s) 213, 965
BsmFI GGGAC 2 cut(s) 309, 458
BsnI GGCC 2 cut(s) 34, 841
Bsp1286I GDGCHC 2 cut(s) 85, 324
Bsp143I GATC 6 cut(s) 58, 423, 477, 786, 1101, 1176
Bsp19I CCATGG 2 cut(s) 288, 352
BspACI CCGC 3 cut(s) 35, 185, 595
BspANI GGCC 2 cut(s) 34, 841
BspCNI CTCAG 4 cut(s) 743, 815, 961, 999
BspFNI CGCG 4 cut(s) 25, 37, 57, 597
BspHI TCATGA 1 cut(s) 213
BspLI GGNNCC 4 cut(s) 297, 446, 1065, 1103
BspOI GCTAGC 1 cut(s) 531
BspPI GGATC 4 cut(s) 53, 1096, 1109, 1184
BspQI GCTCTTC 1 cut(s) 382
BsrDI GCAATG 1 cut(s) 1328
BsrFI RCCGGY 1 cut(s) 581
BsrI ACTGG 1 cut(s) 754
BssAI RCCGGY 1 cut(s) 581
BssECI CCNNGG 6 cut(s) 288, 352, 807, 906, 907, 1071
BssMI GATC 6 cut(s) 58, 423, 477, 786, 1101, 1176
BssNAI GTATAC 1 cut(s) 1219
BssT1I CCWWGG 3 cut(s) 288, 352, 807
Bst1107I GTATAC 1 cut(s) 1219
Bst2UI CCWGG 5 cut(s) 300, 308, 722, 908, 1347
Bst4CI ACNGT 4 cut(s) 16, 314, 403, 1216
Bst6I CTCTTC 1 cut(s) 382
BstBAI YACGTR 1 cut(s) 1028
BstC8I GCNNGC 3 cut(s) 529, 727, 1260
BstDEI CTNAG 4 cut(s) 730, 802, 969, 986
BstDSI CCRYGG 2 cut(s) 288, 352
BstEII GGTNACC 1 cut(s) 1075
BstF5I GGATG 4 cut(s) 303, 363, 907, 1131
BstFNI CGCG 4 cut(s) 25, 37, 57, 597
BstH2I RGCGCY 1 cut(s) 932
BstHHI GCGC 6 cut(s) 25, 57, 599, 647, 931, 1335
BstKTI GATC 6 cut(s) 61, 426, 480, 789, 1104, 1179
BstMAI GTCTC 2 cut(s) 213, 965
BstMBI GATC 6 cut(s) 58, 423, 477, 786, 1101, 1176
BstMCI CGRYCG 1 cut(s) 1356
BstMWI GCNNNNNNNGC 5 cut(s) 31, 63, 596, 636, 951
BstNI CCWGG 5 cut(s) 300, 308, 722, 908, 1347
BstPI GGTNACC 1 cut(s) 1075
BstSCI CCNGG 5 cut(s) 298, 306, 720, 906, 1345
BstUI CGCG 4 cut(s) 25, 37, 57, 597
BstV1I GCAGC 2 cut(s) 169, 918
BstV2I GAAGAC 3 cut(s) 284, 788, 1143
BstX2I RGATCY 2 cut(s) 423, 1101
BstYI RGATCY 2 cut(s) 423, 1101
BstZ17I GTATAC 1 cut(s) 1219
BsuRI GGCC 2 cut(s) 34, 841
BtgI CCRYGG 2 cut(s) 288, 352
BtsCI GGATG 4 cut(s) 303, 363, 907, 1131
BtsI GCAGTG 1 cut(s) 640
BtsIMutI CAGTG 2 cut(s) 399, 640
Cac8I GCNNGC 3 cut(s) 529, 727, 1260
CaiI CAGNNNCTG 1 cut(s) 272
CciI TCATGA 1 cut(s) 213
CfoI GCGC 6 cut(s) 25, 57, 599, 647, 931, 1335
Cfr10I RCCGGY 1 cut(s) 581
Cfr13I GGNCC 4 cut(s) 296, 349, 445, 839
CseI GACGC 3 cut(s) 104, 230, 982
CsiI ACCWGGT 1 cut(s) 1345
CspAI ACCGGT 1 cut(s) 581
CviAII CATG 5 cut(s) 214, 289, 353, 430, 997
DdeI CTNAG 4 cut(s) 730, 802, 969, 986
DpnI GATC 6 cut(s) 60, 425, 479, 788, 1103, 1178
DpnII GATC 6 cut(s) 58, 423, 477, 786, 1101, 1176
DraI TTTAAA 1 cut(s) 960
DraIII CACNNNGTG 1 cut(s) 1028
Eam1104I CTCTTC 1 cut(s) 382
EarI CTCTTC 1 cut(s) 382
Eco130I CCWWGG 3 cut(s) 288, 352, 807
Eco47I GGWCC 3 cut(s) 296, 349, 445
Eco57I CTGAAG 1 cut(s) 1224
Eco72I CACGTG 1 cut(s) 1028
Eco91I GGTNACC 1 cut(s) 1075
EcoO109I RGGNCCY 1 cut(s) 445
EcoO65I GGTNACC 1 cut(s) 1075
EcoRII CCWGG 5 cut(s) 298, 306, 720, 906, 1345
EcoT14I CCWWGG 3 cut(s) 288, 352, 807
EcoT22I ATGCAT 2 cut(s) 967, 1393
ErhI CCWWGG 3 cut(s) 288, 352, 807
Esp3I CGTCTC 2 cut(s) 213, 965
FaeI CATG 5 cut(s) 217, 292, 356, 433, 1000
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 2 cut(s) 309, 458
FatI CATG 5 cut(s) 213, 288, 352, 429, 996
FblI GTMKAC 2 cut(s) 717, 1218
Fnu4HI GCNGC 3 cut(s) 35, 183, 932
FokI GGATG 4 cut(s) 290, 370, 914, 1138
Fsp4HI GCNGC 3 cut(s) 35, 183, 932
FspBI CTAG 7 cut(s) 528, 834, 846, 1032, 1106, 1151, 1190
FspI TGCGCA 1 cut(s) 1334
GlaI GCGC 6 cut(s) 24, 56, 598, 646, 930, 1334
GluI GCNGC 3 cut(s) 35, 183, 932
GsaI CCCAGC 2 cut(s) 66, 276
GsuI CTGGAG 1 cut(s) 771
HaeII RGCGCY 1 cut(s) 932
HaeIII GGCC 2 cut(s) 34, 841
HapII CCGG 1 cut(s) 582
HgaI GACGC 3 cut(s) 104, 230, 982
HhaI GCGC 6 cut(s) 25, 57, 599, 647, 931, 1335
Hin1II CATG 5 cut(s) 217, 292, 356, 433, 1000
Hin6I GCGC 6 cut(s) 23, 55, 597, 645, 929, 1333
HinP1I GCGC 6 cut(s) 23, 55, 597, 645, 929, 1333
HincII GTYRAC 1 cut(s) 718
HindII GTYRAC 1 cut(s) 718
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 8 cut(s) 27, 170, 551, 671, 709, 856, 875, 1193
HpaII CCGG 1 cut(s) 582
HphI GGTGA 2 cut(s) 939, 1014
Hpy166II GTNNAC 3 cut(s) 657, 718, 1219
Hpy188I TCNGA 4 cut(s) 550, 733, 970, 1358
Hpy188III TCNNGA 6 cut(s) 214, 770, 872, 921, 1319, 1340
Hpy8I GTNNAC 3 cut(s) 657, 718, 1219
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 4 cut(s) 115, 752, 1045, 1166
HpyCH4III ACNGT 4 cut(s) 16, 314, 403, 1216
HpyCH4IV ACGT 4 cut(s) 9, 816, 1027, 1403
HpyCH4V TGCA 4 cut(s) 392, 579, 965, 1391
HpyF10VI GCNNNNNNNGC 5 cut(s) 31, 63, 596, 636, 951
HpyF3I CTNAG 4 cut(s) 730, 802, 969, 986
HpySE526I ACGT 4 cut(s) 9, 816, 1027, 1403
Hsp92II CATG 5 cut(s) 217, 292, 356, 433, 1000
HspAI GCGC 6 cut(s) 23, 55, 597, 645, 929, 1333
Kzo9I GATC 6 cut(s) 58, 423, 477, 786, 1101, 1176
LguI GCTCTTC 1 cut(s) 382
LmnI GCTCC 1 cut(s) 752
Lsp1109I GCAGC 2 cut(s) 169, 918
LweI GCATC 7 cut(s) 42, 312, 892, 900, 974, 1028, 1400
MabI ACCWGGT 1 cut(s) 1345
MaeI CTAG 7 cut(s) 528, 834, 846, 1032, 1106, 1151, 1190
MaeII ACGT 4 cut(s) 9, 816, 1027, 1403
MaeIII GTNAC 4 cut(s) 10, 517, 872, 1075
MalI GATC 6 cut(s) 60, 425, 479, 788, 1103, 1178
MboI GATC 6 cut(s) 58, 423, 477, 786, 1101, 1176
MboII GAAGA 9 cut(s) 140, 289, 329, 369, 785, 793, 1148, 1166, 1235
MflI RGATCY 2 cut(s) 423, 1101
MhlI GDGCHC 2 cut(s) 85, 324
MluCI AATT 3 cut(s) 134, 407, 916
MlyI GAGTC 2 cut(s) 164, 869
MmeI TCCRAC 3 cut(s) 432, 1300, 1336
Mph1103I ATGCAT 2 cut(s) 967, 1393
MseI TTAA 3 cut(s) 405, 678, 959
MslI CAYNNNNRTG 1 cut(s) 1145
MspI CCGG 1 cut(s) 582
MspR9I CCNGG 5 cut(s) 300, 308, 722, 908, 1347
MvaI CCWGG 5 cut(s) 300, 308, 722, 908, 1347
MvnI CGCG 4 cut(s) 25, 37, 57, 597
MwoI GCNNNNNNNGC 5 cut(s) 31, 63, 596, 636, 951
NcoI CCATGG 2 cut(s) 288, 352
NdeII GATC 6 cut(s) 58, 423, 477, 786, 1101, 1176
NheI GCTAGC 1 cut(s) 527
NlaIII CATG 5 cut(s) 217, 292, 356, 433, 1000
NlaIV GGNNCC 4 cut(s) 297, 446, 1065, 1103
NmuCI GTSAC 1 cut(s) 872
NsbI TGCGCA 1 cut(s) 1334
NsiI ATGCAT 2 cut(s) 967, 1393
PagI TCATGA 1 cut(s) 213
PasI CCCWGGG 1 cut(s) 907
PciSI GCTCTTC 1 cut(s) 382
PcsI WCGNNNNNNNCGW 1 cut(s) 1400
PfeI GAWTC 6 cut(s) 27, 551, 671, 709, 856, 1193
PfoI TCCNGGA 1 cut(s) 306
PinAI ACCGGT 1 cut(s) 581
PkrI GCNGC 3 cut(s) 36, 184, 933
PleI GAGTC 2 cut(s) 164, 869
PmaCI CACGTG 1 cut(s) 1028
PmlI CACGTG 1 cut(s) 1028
PpsI GAGTC 2 cut(s) 164, 869
Ppu21I YACGTR 1 cut(s) 1028
PpuMI RGGWCCY 1 cut(s) 445
Psp5II RGGWCCY 1 cut(s) 445
Psp6I CCWGG 5 cut(s) 298, 306, 720, 906, 1345
PspCI CACGTG 1 cut(s) 1028
PspEI GGTNACC 1 cut(s) 1075
PspFI CCCAGC 2 cut(s) 62, 272
PspGI CCWGG 5 cut(s) 298, 306, 720, 906, 1345
PspN4I GGNNCC 4 cut(s) 297, 446, 1065, 1103
PspPI GGNCC 4 cut(s) 296, 349, 445, 839
PspPPI RGGWCCY 1 cut(s) 445
PsrI GAACNNNNNNTAC 1 cut(s) 1379
PstNI CAGNNNCTG 1 cut(s) 272
PsuI RGATCY 2 cut(s) 423, 1101
RseI CAYNNNNRTG 1 cut(s) 1145
SalI GTCGAC 1 cut(s) 716
SapI GCTCTTC 1 cut(s) 382
SaqAI TTAA 3 cut(s) 405, 678, 959
SatI GCNGC 3 cut(s) 35, 183, 932
Sau3AI GATC 6 cut(s) 58, 423, 477, 786, 1101, 1176
Sau96I GGNCC 4 cut(s) 296, 349, 445, 839
SchI GAGTC 2 cut(s) 164, 869
ScrFI CCNGG 5 cut(s) 300, 308, 722, 908, 1347
SduI GDGCHC 2 cut(s) 85, 324
SexAI ACCWGGT 1 cut(s) 1345
SfaNI GCATC 7 cut(s) 42, 312, 892, 900, 974, 1028, 1400
SinI GGWCC 3 cut(s) 296, 349, 445
SmiMI CAYNNNNRTG 1 cut(s) 1145
SpeI ACTAGT 1 cut(s) 833
Sse9I AATT 3 cut(s) 134, 407, 916
SsiI CCGC 3 cut(s) 35, 185, 595
SspMI CTAG 7 cut(s) 528, 834, 846, 1032, 1106, 1151, 1190
StyD4I CCNGG 5 cut(s) 298, 306, 720, 906, 1345
StyI CCWWGG 3 cut(s) 288, 352, 807
TaaI ACNGT 4 cut(s) 16, 314, 403, 1216
TaiI ACGT 4 cut(s) 12, 819, 1030, 1406
TaqI TCGA 6 cut(s) 85, 93, 150, 717, 922, 1196
TaqII GACCGA 1 cut(s) 1342
TasI AATT 3 cut(s) 134, 407, 916
TauI GCSGC 1 cut(s) 37
TfiI GAWTC 6 cut(s) 27, 551, 671, 709, 856, 1193
Tru1I TTAA 3 cut(s) 405, 678, 959
Tru9I TTAA 3 cut(s) 405, 678, 959
TscAI CASTG 2 cut(s) 406, 647
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 2 cut(s) 182, 931
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 7 cut(s) 147, 523, 632, 1101, 1130, 1284, 1363
TspGWI ACGGA 1 cut(s) 255
TspRI CASTG 2 cut(s) 406, 647
VpaK11BI GGWCC 3 cut(s) 296, 349, 445
XapI RAATTY 2 cut(s) 134, 916
XmiI GTMKAC 2 cut(s) 717, 1218
XspI CTAG 7 cut(s) 528, 834, 846, 1032, 1106, 1151, 1190
Zsp2I ATGCAT 2 cut(s) 967, 1393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.