FvH4_6g05340
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
3001849 .. 3005942
4094 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g05340.t1

Sequence Viewer

Length: 1425 bp
ATGGCGAGCATAACGGCATGCGTTCGGTTCAGGCCTTTGAGCTCCAGAGAGAGAAGAGATCACGGCGACTCAGTCTGCGTTCACTGTGTAGATTCGCAGAGCTTCGTCTTCAAGGATGAGAAGGAAGAAGAATTTACTTTTGGATTTGATAAGGTGTTTTACGAAAACTCGGAGCAAGCTCAGGTCTATGAATTTCTAGCTCTGCCGATTGTGAAAGATGCTGTTGATGGTATCAACGGCACGATCATCACTTATGGACAGACTGGAGCTGGGAAGACATATAGTATGGAGGGGCCTAGCATAATGGTAATCAATGAGCAGGAGAGAGGTTTAGTTCCAAGAGTAGTTGATGGACTGTTTGATTGCATTAAGTCTTCTGATGGAATAGTGAAGTACTCGATCAAATTGTCAATGGTGGAGATCTACATGGAAAAAGTAAGGGACCTCTTTGATTTGTCAAAAGACAACATACAGATCAAGGAGAGTAAAGCGCAGGGCATGGTGCTAAATGGAGTGACAGAGATCTCAGTTTCGGATCCTGCAGAAGCATTACAGACCCTATCTAGTGGGATAGCTAACAGAACTGTTGGAGAGACCCAGATGAACATGTCCAGCAGCAGAAGTCATTGTGTTTACTTATTCACAGTTCAGCAAGAACTAAAGAAAGATAACAGGTTGAGAACTGGCAAATTGATTCTTGTTGACTTGGCTGGTTCTGAGAAAGCAGAGAAAACTGGAGCAGAAGGAAAAGTTCTTGAAGAAGCCAAGACCATCAACAAATCCCTCTCAGCCCTTGGAAATGTTATAAATGCTCTCACATGTGGTTTACCAGGCAAAGCAAACCACATACCATATCGTGATTCTAAACTCACTCGGCTTTTACAAGATGCACTGGGAGGGAATTCCCGTACTGCGTTGTTGTGCTGTTGCTCACCAAGCCCTTCAAATGCATCAGAGAGTCTGTCCACTCTTCGCTTTGGAATGAGGGCAAAGCATATAAAGATGTCACCATGTGCGAAGTCGAGTGAAGATAAATCCGCTAAAAAGGATGGATCTCCCTCTTCAAGTAAAAATCAGGCATGTGAGAGAATTTTGGAACAGTTGAGGGACAGATTTGGTGTTGAAGATGTGATGTTACTGGAGGAGTTGTTCAGATTGAGTGGAATTCTCCATGAGCCTGGTTCTGCTGAAGATTTGGATTCCGCATTTGAGGATGTCACTTCACAGACCATTATACAATTGCAGCACATGGTGGAAGAGCTTGTATCCACCGTAGAAGAGCTCAAGAACGAGAATATGACTCTGAAGTACAGACTGGCAGCTAGTGAAAGGAACGATACACAATGTAAAGAAGCTGGAGGTCATACTGCAAGCATTCTGCATAGAGTTTCAGGCACTCTCGGTTCCTTTCTGCCTTGGTTCTGA

Protein Analysis

475

Amino Acids

52.17

Weight (kDa)

5.57

Isoelectric Point (pI)

43.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 9 - 333 2.6e-107 Kinesin motor domain
Microtub_bd PF16796 24 - 149 4.3e-20 Microtubule binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011695)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 806
AciI CCGC 2 cut(s) 1038, 1203
AclWI GGATC 3 cut(s) 530, 543, 1060
AcsI RAATTY 5 cut(s) 131, 191, 901, 1089, 1164
AcuI CTGAAG 2 cut(s) 1209, 1325
AdeI CACNNNGTG 2 cut(s) 1013, 1252
AfaI GTAC 3 cut(s) 395, 910, 1310
AflIII ACRYGT 2 cut(s) 606, 818
AgsI TTSAA 5 cut(s) 112, 758, 945, 1065, 1124
AjnI CCWGG 2 cut(s) 829, 1177
AjuI GAANNNNNNNTTGG 2 cut(s) 123, 155
AloI GAACNNNNNNTCC 2 cut(s) 1133, 1165
Alw21I GWGCWC 2 cut(s) 44, 1284
Alw26I GTCTC 1 cut(s) 587
AlwI GGATC 3 cut(s) 530, 543, 1060
AoxI GGCC 2 cut(s) 32, 293
ApeKI GCWGC 3 cut(s) 615, 1243, 1319
ApoI RAATTY 5 cut(s) 131, 191, 901, 1089, 1164
AspLEI GCGC 1 cut(s) 493
AspS9I GGNCC 2 cut(s) 293, 442
AsuHPI GGTGA 2 cut(s) 924, 999
AvaII GGWCC 1 cut(s) 442
BamHI GGATCC 1 cut(s) 535
BanII GRGCYC 2 cut(s) 44, 1284
BbsI GAAGAC 3 cut(s) 100, 281, 366
Bbv12I GWGCWC 2 cut(s) 44, 1284
BbvI GCAGC 3 cut(s) 627, 1255, 1331
BccI CCATC 5 cut(s) 221, 344, 374, 779, 1043
BceAI ACGGC 3 cut(s) 30, 79, 253
BciT130I CCWGG 2 cut(s) 831, 1179
BciVI GTATCC 1 cut(s) 1276
BcoDI GTCTC 1 cut(s) 587
BfaI CTAG 4 cut(s) 197, 297, 564, 1323
BfmI CTRYAG 1 cut(s) 540
BfuI GTATCC 1 cut(s) 1276
BglII AGATCT 2 cut(s) 420, 522
BisI GCNGC 3 cut(s) 616, 1244, 1320
BlsI GCNGC 3 cut(s) 617, 1245, 1321
BmcAI AGTACT 1 cut(s) 395
Bme1390I CCNGG 2 cut(s) 831, 1179
Bme18I GGWCC 1 cut(s) 442
BmgT120I GGNCC 2 cut(s) 293, 442
BmiI GGNNCC 4 cut(s) 294, 443, 537, 1405
BmrFI CCNGG 2 cut(s) 831, 1179
BmrI ACTGGG 1 cut(s) 902
BmsI GCATC 3 cut(s) 208, 877, 959
BmuI ACTGGG 1 cut(s) 902
BpiI GAAGAC 3 cut(s) 100, 281, 366
BpmI CTGGAG 5 cut(s) 28, 285, 756, 1160, 1377
Bpu10I CCTNAGC 1 cut(s) 180
BpuEI CTTGAG 1 cut(s) 1268
BsaI GGTCTC 1 cut(s) 587
BsaJI CCNNGG 2 cut(s) 793, 1415
BsaXI ACNNNNNCTCC 2 cut(s) 1133, 1163
Bse1I ACTGG 6 cut(s) 268, 688, 739, 897, 1143, 1320
BseBI CCWGG 2 cut(s) 831, 1179
BseDI CCNNGG 2 cut(s) 793, 1415
BseGI GGATG 3 cut(s) 121, 1054, 1219
BseMII CTCAG 5 cut(s) 84, 194, 540, 708, 801
BseNI ACTGG 6 cut(s) 268, 688, 739, 897, 1143, 1320
BseRI GAGGAG 1 cut(s) 1157
BseXI GCAGC 3 cut(s) 627, 1255, 1331
BseYI CCCAGC 1 cut(s) 269
BshFI GGCC 2 cut(s) 34, 295
BsiHKAI GWGCWC 2 cut(s) 44, 1284
BslFI GGGAC 2 cut(s) 455, 1121
BsmAI GTCTC 1 cut(s) 587
BsmFI GGGAC 2 cut(s) 455, 1121
BsmI GAATGC 1 cut(s) 1374
BsnI GGCC 2 cut(s) 34, 295
Bso31I GGTCTC 1 cut(s) 587
Bsp1286I GDGCHC 2 cut(s) 44, 1284
Bsp143I GATC 8 cut(s) 58, 243, 399, 420, 474, 522, 535, 1052
BspACI CCGC 2 cut(s) 1038, 1203
BspANI GGCC 2 cut(s) 34, 295
BspCNI CTCAG 5 cut(s) 83, 193, 539, 709, 800
BspLI GGNNCC 4 cut(s) 294, 443, 537, 1405
BspMAI CTGCAG 1 cut(s) 544
BspPI GGATC 3 cut(s) 530, 543, 1060
BspQI GCTCTTC 2 cut(s) 1251, 1272
BspTNI GGTCTC 1 cut(s) 587
BsrI ACTGG 6 cut(s) 268, 688, 739, 897, 1143, 1320
BssECI CCNNGG 2 cut(s) 793, 1415
BssMI GATC 8 cut(s) 58, 243, 399, 420, 474, 522, 535, 1052
BssT1I CCWWGG 2 cut(s) 793, 1415
Bst2UI CCWGG 2 cut(s) 831, 1179
Bst4CI ACNGT 6 cut(s) 86, 357, 586, 646, 1101, 1273
Bst6I CTCTTC 5 cut(s) 49, 975, 1066, 1251, 1272
BstC8I GCNNGC 4 cut(s) 7, 19, 177, 1372
BstDEI CTNAG 5 cut(s) 70, 180, 526, 717, 787
BstF5I GGATG 3 cut(s) 121, 1054, 1219
BstHHI GCGC 1 cut(s) 493
BstKTI GATC 8 cut(s) 61, 246, 402, 423, 477, 525, 538, 1055
BstMAI GTCTC 1 cut(s) 587
BstMBI GATC 8 cut(s) 58, 243, 399, 420, 474, 522, 535, 1052
BstMWI GCNNNNNNNGC 1 cut(s) 936
BstNI CCWGG 2 cut(s) 831, 1179
BstNSI RCATGY 4 cut(s) 21, 610, 822, 1083
BstSCI CCNGG 2 cut(s) 829, 1177
BstSFI CTRYAG 1 cut(s) 540
BstV1I GCAGC 3 cut(s) 627, 1255, 1331
BstV2I GAAGAC 3 cut(s) 100, 281, 366
BstX2I RGATCY 4 cut(s) 420, 522, 535, 1052
BstXI CCANNNNNNTGG 1 cut(s) 1178
BstYI RGATCY 4 cut(s) 420, 522, 535, 1052
BsuI GTATCC 1 cut(s) 1276
BsuRI GGCC 2 cut(s) 34, 295
BtsCI GGATG 3 cut(s) 121, 1054, 1219
BtsIMutI CAGTG 2 cut(s) 82, 890
Cac8I GCNNGC 4 cut(s) 7, 19, 177, 1372
CfoI GCGC 1 cut(s) 493
Cfr13I GGNCC 2 cut(s) 293, 442
Csp6I GTAC 3 cut(s) 394, 909, 1309
CviAII CATG 9 cut(s) 18, 427, 499, 607, 819, 1011, 1080, 1172, 1249
CviQI GTAC 3 cut(s) 394, 909, 1309
DdeI CTNAG 5 cut(s) 70, 180, 526, 717, 787
DpnI GATC 8 cut(s) 60, 245, 401, 422, 476, 524, 537, 1054
DpnII GATC 8 cut(s) 58, 243, 399, 420, 474, 522, 535, 1052
DraIII CACNNNGTG 2 cut(s) 1013, 1252
Eam1104I CTCTTC 5 cut(s) 49, 975, 1066, 1251, 1272
EarI CTCTTC 5 cut(s) 49, 975, 1066, 1251, 1272
Ecl136II GAGCTC 2 cut(s) 42, 1282
Eco130I CCWWGG 2 cut(s) 793, 1415
Eco147I AGGCCT 1 cut(s) 34
Eco24I GRGCYC 2 cut(s) 44, 1284
Eco31I GGTCTC 1 cut(s) 587
Eco47I GGWCC 1 cut(s) 442
Eco53kI GAGCTC 2 cut(s) 42, 1282
Eco57I CTGAAG 2 cut(s) 1209, 1325
EcoICRI GAGCTC 2 cut(s) 42, 1282
EcoO109I RGGNCCY 2 cut(s) 293, 442
EcoRI GAATTC 2 cut(s) 901, 1164
EcoRII CCWGG 2 cut(s) 829, 1177
EcoT14I CCWWGG 2 cut(s) 793, 1415
EcoT22I ATGCAT 1 cut(s) 952
EcoT38I GRGCYC 2 cut(s) 44, 1284
ErhI CCWWGG 2 cut(s) 793, 1415
FaeI CATG 9 cut(s) 21, 430, 502, 610, 822, 1014, 1083, 1175, 1252
FaqI GGGAC 2 cut(s) 455, 1121
FatI CATG 9 cut(s) 17, 426, 498, 606, 818, 1010, 1079, 1171, 1248
Fnu4HI GCNGC 3 cut(s) 616, 1244, 1320
FokI GGATG 3 cut(s) 128, 1061, 1226
FriOI GRGCYC 2 cut(s) 44, 1284
Fsp4HI GCNGC 3 cut(s) 616, 1244, 1320
FspBI CTAG 4 cut(s) 197, 297, 564, 1323
GlaI GCGC 1 cut(s) 492
GluI GCNGC 3 cut(s) 616, 1244, 1320
GsaI CCCAGC 1 cut(s) 273
GsuI CTGGAG 5 cut(s) 28, 285, 756, 1160, 1377
HaeIII GGCC 2 cut(s) 34, 295
HhaI GCGC 1 cut(s) 493
Hin1II CATG 9 cut(s) 21, 430, 502, 610, 822, 1014, 1083, 1175, 1252
Hin6I GCGC 1 cut(s) 491
HinP1I GCGC 1 cut(s) 491
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HinfI GANTC 7 cut(s) 68, 92, 694, 860, 958, 1199, 1300
HphI GGTGA 2 cut(s) 924, 999
Hpy166II GTNNAC 5 cut(s) 82, 634, 703, 827, 966
Hpy188I TCNGA 8 cut(s) 172, 379, 535, 718, 955, 1154, 1305, 1424
Hpy188III TCNNGA 4 cut(s) 45, 755, 857, 1285
Hpy8I GTNNAC 5 cut(s) 82, 634, 703, 827, 966
HpyAV CCTTC 3 cut(s) 115, 737, 951
HpyCH4III ACNGT 6 cut(s) 86, 357, 586, 646, 1101, 1273
HpyCH4V TGCA 7 cut(s) 366, 542, 890, 950, 1243, 1370, 1381
HpyF10VI GCNNNNNNNGC 1 cut(s) 936
HpyF3I CTNAG 5 cut(s) 70, 180, 526, 717, 787
Hsp92II CATG 9 cut(s) 21, 430, 502, 610, 822, 1014, 1083, 1175, 1252
HspAI GCGC 1 cut(s) 491
Kzo9I GATC 8 cut(s) 58, 243, 399, 420, 474, 522, 535, 1052
LguI GCTCTTC 2 cut(s) 1251, 1272
LmnI GCTCC 4 cut(s) 47, 172, 266, 737
Lsp1109I GCAGC 3 cut(s) 627, 1255, 1331
LweI GCATC 3 cut(s) 208, 877, 959
MaeI CTAG 4 cut(s) 197, 297, 564, 1323
MaeIII GTNAC 4 cut(s) 514, 1005, 1134, 1216
MalI GATC 8 cut(s) 60, 245, 401, 422, 476, 524, 537, 1054
MboI GATC 8 cut(s) 58, 243, 399, 420, 474, 522, 535, 1052
MfeI CAATTG 1 cut(s) 1238
MflI RGATCY 4 cut(s) 420, 522, 535, 1052
MhlI GDGCHC 2 cut(s) 44, 1284
MluCI AATT 8 cut(s) 131, 191, 404, 689, 901, 1089, 1164, 1238
MlyI GAGTC 3 cut(s) 62, 967, 1294
MmeI TCCRAC 1 cut(s) 568
Mph1103I ATGCAT 1 cut(s) 952
MseI TTAA 1 cut(s) 369
MspR9I CCNGG 2 cut(s) 831, 1179
MunI CAATTG 1 cut(s) 1238
Mva1269I GAATGC 1 cut(s) 1374
MvaI CCWGG 2 cut(s) 831, 1179
MwoI GCNNNNNNNGC 1 cut(s) 936
NdeII GATC 8 cut(s) 58, 243, 399, 420, 474, 522, 535, 1052
NlaIII CATG 9 cut(s) 21, 430, 502, 610, 822, 1014, 1083, 1175, 1252
NlaIV GGNNCC 4 cut(s) 294, 443, 537, 1405
NmeAIII GCCGAG 1 cut(s) 853
NmuCI GTSAC 3 cut(s) 514, 1005, 1216
NsiI ATGCAT 1 cut(s) 952
NspI RCATGY 4 cut(s) 21, 610, 822, 1083
PaeI GCATGC 1 cut(s) 21
PceI AGGCCT 1 cut(s) 34
PciI ACATGT 2 cut(s) 606, 818
PciSI GCTCTTC 2 cut(s) 1251, 1272
PctI GAATGC 1 cut(s) 1374
PfeI GAWTC 4 cut(s) 92, 694, 860, 1199
PflFI GACNNNGTC 1 cut(s) 71
PkrI GCNGC 3 cut(s) 617, 1245, 1321
PleI GAGTC 3 cut(s) 62, 966, 1294
PpsI GAGTC 3 cut(s) 62, 966, 1294
PpuMI RGGWCCY 1 cut(s) 442
PscI ACATGT 2 cut(s) 606, 818
PsiI TTATAA 1 cut(s) 806
Psp124BI GAGCTC 2 cut(s) 44, 1284
Psp5II RGGWCCY 1 cut(s) 442
Psp6I CCWGG 2 cut(s) 829, 1177
PspFI CCCAGC 1 cut(s) 269
PspGI CCWGG 2 cut(s) 829, 1177
PspN4I GGNNCC 4 cut(s) 294, 443, 537, 1405
PspPI GGNCC 2 cut(s) 293, 442
PspPPI RGGWCCY 1 cut(s) 442
PstI CTGCAG 1 cut(s) 544
PsuI RGATCY 4 cut(s) 420, 522, 535, 1052
PsyI GACNNNGTC 1 cut(s) 71
RsaI GTAC 3 cut(s) 395, 910, 1310
RsaNI GTAC 3 cut(s) 394, 909, 1309
SacI GAGCTC 2 cut(s) 44, 1284
SapI GCTCTTC 2 cut(s) 1251, 1272
SaqAI TTAA 1 cut(s) 369
SatI GCNGC 3 cut(s) 616, 1244, 1320
Sau3AI GATC 8 cut(s) 58, 243, 399, 420, 474, 522, 535, 1052
Sau96I GGNCC 2 cut(s) 293, 442
ScaI AGTACT 1 cut(s) 395
SchI GAGTC 3 cut(s) 62, 967, 1294
ScrFI CCNGG 2 cut(s) 831, 1179
SduI GDGCHC 2 cut(s) 44, 1284
SfaNI GCATC 3 cut(s) 208, 877, 959
SfcI CTRYAG 1 cut(s) 540
SinI GGWCC 1 cut(s) 442
SmlI CTYRAG 1 cut(s) 1283
SmoI CTYRAG 1 cut(s) 1283
SphI GCATGC 1 cut(s) 21
Sse9I AATT 8 cut(s) 131, 191, 404, 689, 901, 1089, 1164, 1238
SseBI AGGCCT 1 cut(s) 34
SsiI CCGC 2 cut(s) 1038, 1203
SspMI CTAG 4 cut(s) 197, 297, 564, 1323
SstI GAGCTC 2 cut(s) 44, 1284
StuI AGGCCT 1 cut(s) 34
StyD4I CCNGG 2 cut(s) 829, 1177
StyI CCWWGG 2 cut(s) 793, 1415
TaaI ACNGT 6 cut(s) 86, 357, 586, 646, 1101, 1273
TaqI TCGA 2 cut(s) 398, 1022
TasI AATT 8 cut(s) 131, 191, 404, 689, 901, 1089, 1164, 1238
TatI WGTACW 2 cut(s) 393, 1308
TfiI GAWTC 4 cut(s) 92, 694, 860, 1199
Tru1I TTAA 1 cut(s) 369
Tru9I TTAA 1 cut(s) 369
TscAI CASTG 2 cut(s) 89, 897
TseFI GTSAC 3 cut(s) 514, 1005, 1216
TseI GCWGC 3 cut(s) 615, 1243, 1319
Tsp45I GTSAC 3 cut(s) 514, 1005, 1216
TspDTI ATGAA 2 cut(s) 204, 617
TspRI CASTG 2 cut(s) 89, 897
Tth111I GACNNNGTC 1 cut(s) 71
VpaK11BI GGWCC 1 cut(s) 442
XapI RAATTY 5 cut(s) 131, 191, 901, 1089, 1164
XceI RCATGY 4 cut(s) 21, 610, 822, 1083
XspI CTAG 4 cut(s) 197, 297, 564, 1323
ZrmI AGTACT 1 cut(s) 395
Zsp2I ATGCAT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.