pycom12g20920
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
22259400 .. 22262581
3182 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g20920.5

Sequence Viewer

Length: 1557 bp
ATGGCGAGTATGACAATATGTGCACGATTCCGGCCTTTGAGCTCCAAAGAGAGAAGAGATCACGGCGATGCAGTCTGCATTCAACACGTAGACTCCGAAACTTTCAGTTTCAAGGATGAGAAGGATGAAGAATTCACATTTAGCTTTGATAAGGTGTTCTACGAGAAATCTGAGCAGGCTCAAGTGTATGAATTTCTAGCTTCGCCTATTGTGCGAGATGCTGTTGATGCAATCAATGGGACGATCGTTACTTATGGACAGACTGGAGCGGGGAAGACATATAGCATGGAGGGGCCTAGCATACTGGTACGTGACGAGCAGAAGAGAGGATTACTTCCAAGAGTAGTTGAGGGTCTGTTTGATTGCATTAAATCTTCTGGAAGAACAATGAAGCACTCAATCAAATTGTCAATGGTAGAGATCTACATGGAAAGAGTAAGGGACCTTTTTGATTTAGCAAAAGACAACATACAGATTAAGGAAAGTAAATCGCAGGGGATATTGTTAAATGGAGTAACAGAGATCTCTGTGTCGTGTCCTGCAGAAGCATTGCAAAGCCTATCTAATGGCATAGCTAACAGGGCTGTGGGAGAGACCCGTATCCTTTGCTTTCTTTTTCCGTTCTACAGCAGAAGCCACTGCATATACATATTCACAGTTCAGCAAGAAGTAAAGAAAGATGAGAGGTCGAAAGCTGGAAAGTTAATTCTTGTAGACTTGGCTGGATCTGAGAAAGTAGAGAAAACCGGGGCTGAGGGAAAAGTTCTTGAAGAAGCTAAGACAATCAACAAGTCTCTCTCAGCCCTTGGAAATGTCATAAATGCTCTGACATGTGGGTCATCGGGCAAAGCAAACCACATTCCCTTCCGCGATTCCAAGCTCACTCGGATTTTACAAGATTCACTGGGAGGTAACTCGCGTACTGCATTGTTGTGTTGTTGCTCACCAAGCCCTTCGAATGCGTTGGAGAGTCTGTCCACTCTTCGCTTTGGGATGAGGGCAAAGCATATAAAGATGTCACCGCGTCTCAAAGGTAACGAAGATAAATCTGCTAAAAAGAACGGACCTCCCTCCCCAACTAAAGATGAGTCATGCGAGATAATTCTTGAGATGTTGAGGGAGAGATTTGATGCCGAAGATGTGAAGTTACTTGAGGAGTTGTTCACATTGAGTGGAATTCTCTTTGATCCTTCTTCGCCTGAAGAGGTAGACTCAGCATTGGCGGATGTTACTTCACAGACGATTACCTTATTGCAGCAAGCAGTGGAAGATCTTGCATCCACCGTTGAGGAGGTACGTGTTACTTGGTACCGAGAATGGCGTGTAAACAGCCTTGTCTACATTCTTCAATATGAATTTTGTTGTGCCGGTTTTATGCCGTTGCAGCTTAAGAGAGAGAATAAGGCACTGAAGAACGAATTAGCAGCTGCTAAAAGATCGGATGCACAAAGCGAAGCGGCTGAAGATACTTCAAATGTTCTGCATAAACCTTCAGGAATTATCAGTTCCGTTGTGTCACGGGTCAGGTCACTCTCTTCTATCAAGTTGTTGAAATGA

Protein Analysis

519

Amino Acids

57.45

Weight (kDa)

6.46

Isoelectric Point (pI)

50.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011695)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 835
Acc65I GGTACC 1 cut(s) 1308
AccB1I GGYRCC 1 cut(s) 1308
AccBSI CCGCTC 1 cut(s) 269
AccI GTMKAC 4 cut(s) 90, 714, 1209, 1338
AccII CGCG 3 cut(s) 870, 919, 1024
AciI CCGC 5 cut(s) 269, 868, 1022, 1223, 1457
AclWI GGATC 2 cut(s) 733, 1181
AcsI RAATTY 4 cut(s) 131, 191, 1176, 1355
AcuI CTGAAG 4 cut(s) 1221, 1430, 1476, 1482
AfaI GTAC 4 cut(s) 309, 922, 1296, 1310
AflII CTTAAG 1 cut(s) 1388
AflIII ACRYGT 3 cut(s) 85, 830, 1297
AgsI TTSAA 6 cut(s) 83, 112, 770, 1349, 1473, 1552
AluBI AGCT 9 cut(s) 42, 144, 200, 575, 695, 776, 880, 1387, 1427
AluI AGCT 9 cut(s) 42, 144, 200, 575, 695, 776, 880, 1387, 1427
Alw21I GWGCWC 2 cut(s) 25, 44
Alw26I GTCTC 3 cut(s) 587, 798, 1031
Alw44I GTGCAC 1 cut(s) 21
AlwI GGATC 2 cut(s) 733, 1181
AoxI GGCC 2 cut(s) 32, 293
ApaLI GTGCAC 1 cut(s) 21
ApeKI GCWGC 4 cut(s) 1255, 1384, 1424, 1427
ApoI RAATTY 4 cut(s) 131, 191, 1176, 1355
Asp718I GGTACC 1 cut(s) 1308
AspS9I GGNCC 3 cut(s) 293, 442, 1064
AsuC2I CCSGG 1 cut(s) 748
AsuHPI GGTGA 2 cut(s) 936, 1011
AsuII TTCGAA 1 cut(s) 956
AvaII GGWCC 2 cut(s) 442, 1064
BaeGI GKGCMC 1 cut(s) 25
BanI GGYRCC 1 cut(s) 1308
BanII GRGCYC 1 cut(s) 44
BbsI GAAGAC 1 cut(s) 281
Bbv12I GWGCWC 2 cut(s) 25, 44
BbvCI CCTCAGC 1 cut(s) 753
BbvI GCAGC 4 cut(s) 1267, 1396, 1414, 1436
BceAI ACGGC 2 cut(s) 79, 1363
BciVI GTATCC 1 cut(s) 611
BcnI CCSGG 1 cut(s) 748
BcoDI GTCTC 3 cut(s) 587, 798, 1031
BfaI CTAG 2 cut(s) 197, 297
BfmI CTRYAG 2 cut(s) 540, 625
BfrI CTTAAG 1 cut(s) 1388
BfuI GTATCC 1 cut(s) 611
BglII AGATCT 3 cut(s) 420, 522, 1270
BisI GCNGC 5 cut(s) 1256, 1385, 1425, 1428, 1458
BlsI GCNGC 5 cut(s) 1257, 1386, 1426, 1429, 1459
Bme1390I CCNGG 1 cut(s) 748
Bme18I GGWCC 2 cut(s) 442, 1064
BmgT120I GGNCC 3 cut(s) 293, 442, 1064
BmiI GGNNCC 3 cut(s) 294, 443, 1310
BmrFI CCNGG 1 cut(s) 748
BmrI ACTGGG 1 cut(s) 914
BmsI GCATC 6 cut(s) 58, 208, 217, 1120, 1286, 1432
BmuI ACTGGG 1 cut(s) 914
BpiI GAAGAC 1 cut(s) 281
BplI GAGNNNNNCTC 2 cut(s) 1196, 1228
BpmI CTGGAG 1 cut(s) 285
Bpu10I CCTNAGC 1 cut(s) 753
Bpu14I TTCGAA 1 cut(s) 956
BpuEI CTTGAG 3 cut(s) 165, 1127, 1172
BpuMI CCSGG 1 cut(s) 748
BsaAI YACGTR 3 cut(s) 88, 311, 1298
BsaI GGTCTC 1 cut(s) 587
BsaJI CCNNGG 2 cut(s) 747, 805
BsaXI ACNNNNNCTCC 4 cut(s) 77, 107, 959, 989
Bse118I RCCGGY 1 cut(s) 1367
Bse1I ACTGG 3 cut(s) 268, 309, 909
Bse3DI GCAATG 1 cut(s) 548
BseDI CCNNGG 2 cut(s) 747, 805
BseGI GGATG 6 cut(s) 121, 130, 999, 1231, 1277, 1447
BseMI GCAATG 1 cut(s) 548
BseMII CTCAG 5 cut(s) 162, 720, 744, 813, 1227
BseNI ACTGG 3 cut(s) 268, 309, 909
BseRI GAGGAG 2 cut(s) 1169, 1304
BseSI GKGCMC 1 cut(s) 25
BseXI GCAGC 4 cut(s) 1267, 1396, 1414, 1436
Bsh1236I CGCG 3 cut(s) 870, 919, 1024
Bsh1285I CGRYCG 1 cut(s) 246
BshFI GGCC 2 cut(s) 34, 295
BshNI GGYRCC 1 cut(s) 1308
BsiEI CGRYCG 1 cut(s) 246
BsiHKAI GWGCWC 2 cut(s) 25, 44
BsiSI CCGG 3 cut(s) 31, 747, 1368
BslFI GGGAC 2 cut(s) 253, 455
BsmAI GTCTC 3 cut(s) 587, 798, 1031
BsmBI CGTCTC 1 cut(s) 1031
BsmFI GGGAC 2 cut(s) 253, 455
BsmI GAATGC 2 cut(s) 78, 964
BsnI GGCC 2 cut(s) 34, 295
Bso31I GGTCTC 1 cut(s) 587
Bsp119I TTCGAA 1 cut(s) 956
Bsp1286I GDGCHC 2 cut(s) 25, 44
Bsp143I GATC 8 cut(s) 58, 243, 420, 522, 725, 1186, 1270, 1436
BspACI CCGC 5 cut(s) 269, 868, 1022, 1223, 1457
BspANI GGCC 2 cut(s) 34, 295
BspCNI CTCAG 5 cut(s) 163, 721, 745, 812, 1226
BspFNI CGCG 3 cut(s) 870, 919, 1024
BspLI GGNNCC 3 cut(s) 294, 443, 1310
BspMAI CTGCAG 1 cut(s) 544
BspPI GGATC 2 cut(s) 733, 1181
BspT104I TTCGAA 1 cut(s) 956
BspT107I GGYRCC 1 cut(s) 1308
BspTI CTTAAG 1 cut(s) 1388
BspTNI GGTCTC 1 cut(s) 587
BsrBI CCGCTC 1 cut(s) 269
BsrDI GCAATG 1 cut(s) 548
BsrFI RCCGGY 1 cut(s) 1367
BsrI ACTGG 3 cut(s) 268, 309, 909
BssAI RCCGGY 1 cut(s) 1367
BssECI CCNNGG 2 cut(s) 747, 805
BssMI GATC 8 cut(s) 58, 243, 420, 522, 725, 1186, 1270, 1436
BssT1I CCWWGG 1 cut(s) 805
Bst4CI ACNGT 2 cut(s) 658, 1285
Bst6I CTCTTC 5 cut(s) 49, 317, 987, 1197, 1540
BstAFI CTTAAG 1 cut(s) 1388
BstBAI YACGTR 3 cut(s) 88, 311, 1298
BstBI TTCGAA 1 cut(s) 956
BstC8I GCNNGC 2 cut(s) 177, 1260
BstDEI CTNAG 6 cut(s) 171, 729, 753, 777, 799, 1213
BstF5I GGATG 6 cut(s) 121, 130, 999, 1231, 1277, 1447
BstFNI CGCG 3 cut(s) 870, 919, 1024
BstKTI GATC 8 cut(s) 61, 246, 423, 525, 728, 1189, 1273, 1439
BstMAI GTCTC 3 cut(s) 587, 798, 1031
BstMBI GATC 8 cut(s) 58, 243, 420, 522, 725, 1186, 1270, 1436
BstMCI CGRYCG 1 cut(s) 246
BstMWI GCNNNNNNNGC 5 cut(s) 211, 227, 581, 948, 1384
BstNSI RCATGY 1 cut(s) 834
BstSCI CCNGG 1 cut(s) 746
BstSFI CTRYAG 2 cut(s) 540, 625
BstSLI GKGCMC 1 cut(s) 25
BstUI CGCG 3 cut(s) 870, 919, 1024
BstV1I GCAGC 4 cut(s) 1267, 1396, 1414, 1436
BstV2I GAAGAC 1 cut(s) 281
BstX2I RGATCY 4 cut(s) 420, 522, 725, 1270
BstYI RGATCY 4 cut(s) 420, 522, 725, 1270
BsuI GTATCC 1 cut(s) 611
BsuRI GGCC 2 cut(s) 34, 295
BtgZI GCGATG 1 cut(s) 81
BtsCI GGATG 6 cut(s) 121, 130, 999, 1231, 1277, 1447
BtsI GCAGTG 2 cut(s) 637, 1269
BtsIMutI CAGTG 4 cut(s) 637, 902, 1269, 1406
Cac8I GCNNGC 2 cut(s) 177, 1260
Cfr10I RCCGGY 1 cut(s) 1367
Cfr13I GGNCC 3 cut(s) 293, 442, 1064
CseI GACGC 1 cut(s) 1013
Csp6I GTAC 4 cut(s) 308, 921, 1295, 1309
CviAII CATG 4 cut(s) 286, 427, 831, 1092
CviQI GTAC 4 cut(s) 308, 921, 1295, 1309
DdeI CTNAG 6 cut(s) 171, 729, 753, 777, 799, 1213
DpnI GATC 8 cut(s) 60, 245, 422, 524, 727, 1188, 1272, 1438
DpnII GATC 8 cut(s) 58, 243, 420, 522, 725, 1186, 1270, 1436
DrdI GACNNNNNNGTC 1 cut(s) 835
DseDI GACNNNNNNGTC 1 cut(s) 835
Eam1104I CTCTTC 5 cut(s) 49, 317, 987, 1197, 1540
EarI CTCTTC 5 cut(s) 49, 317, 987, 1197, 1540
EciI GGCGGA 1 cut(s) 1238
Ecl136II GAGCTC 1 cut(s) 42
Eco130I CCWWGG 1 cut(s) 805
Eco24I GRGCYC 1 cut(s) 44
Eco31I GGTCTC 1 cut(s) 587
Eco47I GGWCC 2 cut(s) 442, 1064
Eco53kI GAGCTC 1 cut(s) 42
Eco57I CTGAAG 4 cut(s) 1221, 1430, 1476, 1482
EcoICRI GAGCTC 1 cut(s) 42
EcoO109I RGGNCCY 2 cut(s) 293, 442
EcoRI GAATTC 2 cut(s) 131, 1176
EcoT14I CCWWGG 1 cut(s) 805
EcoT38I GRGCYC 1 cut(s) 44
ErhI CCWWGG 1 cut(s) 805
Esp3I CGTCTC 1 cut(s) 1031
FaeI CATG 4 cut(s) 289, 430, 834, 1095
FaqI GGGAC 2 cut(s) 253, 455
FatI CATG 4 cut(s) 285, 426, 830, 1091
FauI CCCGC 1 cut(s) 262
FblI GTMKAC 4 cut(s) 90, 714, 1209, 1338
Fnu4HI GCNGC 5 cut(s) 1256, 1385, 1425, 1428, 1458
FokI GGATG 6 cut(s) 128, 137, 1006, 1238, 1264, 1454
FriOI GRGCYC 1 cut(s) 44
Fsp4HI GCNGC 5 cut(s) 1256, 1385, 1425, 1428, 1458
FspBI CTAG 2 cut(s) 197, 297
GluI GCNGC 5 cut(s) 1256, 1385, 1425, 1428, 1458
GsuI CTGGAG 1 cut(s) 285
HaeIII GGCC 2 cut(s) 34, 295
HapII CCGG 3 cut(s) 31, 747, 1368
HgaI GACGC 1 cut(s) 1013
Hin1II CATG 4 cut(s) 289, 430, 834, 1095
HinfI GANTC 7 cut(s) 27, 92, 872, 899, 970, 1088, 1211
HpaII CCGG 3 cut(s) 31, 747, 1368
HphI GGTGA 2 cut(s) 936, 1011
Hpy166II GTNNAC 8 cut(s) 23, 91, 715, 978, 1164, 1210, 1327, 1339
Hpy188I TCNGA 6 cut(s) 97, 172, 730, 828, 888, 1441
Hpy188III TCNNGA 4 cut(s) 378, 767, 1106, 1494
Hpy8I GTNNAC 8 cut(s) 23, 91, 715, 978, 1164, 1210, 1327, 1339
HpyAV CCTTC 5 cut(s) 115, 874, 963, 1200, 1500
HpyCH4III ACNGT 2 cut(s) 658, 1285
HpyCH4IV ACGT 3 cut(s) 87, 310, 1297
HpyF10VI GCNNNNNNNGC 5 cut(s) 211, 227, 581, 948, 1384
HpyF3I CTNAG 6 cut(s) 171, 729, 753, 777, 799, 1213
HpySE526I ACGT 3 cut(s) 87, 310, 1297
Hsp92II CATG 4 cut(s) 289, 430, 834, 1095
KpnI GGTACC 1 cut(s) 1312
Kzo9I GATC 8 cut(s) 58, 243, 420, 522, 725, 1186, 1270, 1436
LmnI GCTCC 2 cut(s) 47, 266
Lsp1109I GCAGC 4 cut(s) 1267, 1396, 1414, 1436
LweI GCATC 6 cut(s) 58, 208, 217, 1120, 1286, 1432
MaeI CTAG 2 cut(s) 197, 297
MaeII ACGT 3 cut(s) 87, 310, 1297
MalI GATC 8 cut(s) 60, 245, 422, 524, 727, 1188, 1272, 1438
MbiI CCGCTC 1 cut(s) 269
MboI GATC 8 cut(s) 58, 243, 420, 522, 725, 1186, 1270, 1436
MflI RGATCY 4 cut(s) 420, 522, 725, 1270
MhlI GDGCHC 2 cut(s) 25, 44
MluCI AATT 9 cut(s) 131, 191, 404, 705, 1101, 1176, 1355, 1418, 1497
MlyI GAGTC 4 cut(s) 86, 979, 1097, 1205
MmeI TCCRAC 1 cut(s) 945
MseI TTAA 5 cut(s) 369, 477, 506, 704, 1389
MslI CAYNNNNRTG 2 cut(s) 66, 931
MspA1I CMGCKG 1 cut(s) 1427
MspCI CTTAAG 1 cut(s) 1388
MspI CCGG 3 cut(s) 31, 747, 1368
MspR9I CCNGG 1 cut(s) 748
Mva1269I GAATGC 2 cut(s) 78, 964
MvnI CGCG 3 cut(s) 870, 919, 1024
MwoI GCNNNNNNNGC 5 cut(s) 211, 227, 581, 948, 1384
NciI CCSGG 1 cut(s) 748
NdeII GATC 8 cut(s) 58, 243, 420, 522, 725, 1186, 1270, 1436
NlaIII CATG 4 cut(s) 289, 430, 834, 1095
NlaIV GGNNCC 3 cut(s) 294, 443, 1310
NmuCI GTSAC 4 cut(s) 311, 1017, 1515, 1527
NspI RCATGY 1 cut(s) 834
NspV TTCGAA 1 cut(s) 956
PciI ACATGT 1 cut(s) 830
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PctI GAATGC 2 cut(s) 78, 964
PfeI GAWTC 3 cut(s) 27, 872, 899
PkrI GCNGC 5 cut(s) 1257, 1386, 1426, 1429, 1459
Ple19I CGATCG 1 cut(s) 246
PleI GAGTC 4 cut(s) 86, 978, 1096, 1205
PpsI GAGTC 4 cut(s) 86, 978, 1096, 1205
Ppu21I YACGTR 3 cut(s) 88, 311, 1298
PpuMI RGGWCCY 1 cut(s) 442
PscI ACATGT 1 cut(s) 830
Psp124BI GAGCTC 1 cut(s) 44
Psp5II RGGWCCY 1 cut(s) 442
PspN4I GGNNCC 3 cut(s) 294, 443, 1310
PspPI GGNCC 3 cut(s) 293, 442, 1064
PspPPI RGGWCCY 1 cut(s) 442
PstI CTGCAG 1 cut(s) 544
PsuI RGATCY 4 cut(s) 420, 522, 725, 1270
PvuI CGATCG 1 cut(s) 246
PvuII CAGCTG 1 cut(s) 1427
RsaI GTAC 4 cut(s) 309, 922, 1296, 1310
RsaNI GTAC 4 cut(s) 308, 921, 1295, 1309
RseI CAYNNNNRTG 2 cut(s) 66, 931
SacI GAGCTC 1 cut(s) 44
SaqAI TTAA 5 cut(s) 369, 477, 506, 704, 1389
SatI GCNGC 5 cut(s) 1256, 1385, 1425, 1428, 1458
Sau3AI GATC 8 cut(s) 58, 243, 420, 522, 725, 1186, 1270, 1436
Sau96I GGNCC 3 cut(s) 293, 442, 1064
SchI GAGTC 4 cut(s) 86, 979, 1097, 1205
ScrFI CCNGG 1 cut(s) 748
SduI GDGCHC 2 cut(s) 25, 44
SfaNI GCATC 6 cut(s) 58, 208, 217, 1120, 1286, 1432
SfcI CTRYAG 2 cut(s) 540, 625
SfuI TTCGAA 1 cut(s) 956
SinI GGWCC 2 cut(s) 442, 1064
SmiMI CAYNNNNRTG 2 cut(s) 66, 931
SmlI CTYRAG 4 cut(s) 180, 1106, 1151, 1388
SmoI CTYRAG 4 cut(s) 180, 1106, 1151, 1388
Sse9I AATT 9 cut(s) 131, 191, 404, 705, 1101, 1176, 1355, 1418, 1497
SsiI CCGC 5 cut(s) 269, 868, 1022, 1223, 1457
SspMI CTAG 2 cut(s) 197, 297
SstI GAGCTC 1 cut(s) 44
StyD4I CCNGG 1 cut(s) 746
StyI CCWWGG 1 cut(s) 805
TaaI ACNGT 2 cut(s) 658, 1285
TaiI ACGT 3 cut(s) 90, 313, 1300
TaqI TCGA 2 cut(s) 689, 956
TasI AATT 9 cut(s) 131, 191, 404, 705, 1101, 1176, 1355, 1418, 1497
TauI GCSGC 1 cut(s) 1460
TfiI GAWTC 3 cut(s) 27, 872, 899
Tru1I TTAA 5 cut(s) 369, 477, 506, 704, 1389
Tru9I TTAA 5 cut(s) 369, 477, 506, 704, 1389
TscAI CASTG 4 cut(s) 644, 909, 1269, 1413
TseFI GTSAC 4 cut(s) 311, 1017, 1515, 1527
TseI GCWGC 4 cut(s) 1255, 1384, 1424, 1427
Tsp45I GTSAC 4 cut(s) 311, 1017, 1515, 1527
TspDTI ATGAA 4 cut(s) 141, 204, 404, 1368
TspGWI ACGGA 3 cut(s) 609, 1077, 1498
TspRI CASTG 4 cut(s) 644, 909, 1269, 1413
Vha464I CTTAAG 1 cut(s) 1388
VneI GTGCAC 1 cut(s) 21
VpaK11BI GGWCC 2 cut(s) 442, 1064
XapI RAATTY 4 cut(s) 131, 191, 1176, 1355
XceI RCATGY 1 cut(s) 834
XmiI GTMKAC 4 cut(s) 90, 714, 1209, 1338
XspI CTAG 2 cut(s) 197, 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.