MD12G1223800.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
30028827 .. 30031929
3103 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1223800.v1.1.491

Sequence Viewer

Length: 1443 bp
ATGGCGAGTATGACAATATGTGCTCGATTCCGGCCTTTGAGCTCCAAAGAGAGAAGAGATCACGGCGATGCAGTCTGCATTCAACACGTAGACTCCGAAACTTTCAGTTTCAAGGATGAGAAGGATGAAGAATTCACATTTAGCTTTGATAAGGTGTTCTACGAGAAATCTGAGCAGGCACAAGTGTATGAATTTCTAGCTTCGCCTATTGTGCGAGATGCTGTTGATGCAATCAATGGGACGATCGTTACTTATGGACAGACTGGAGCGGGGAAGACATATAGCATGGAGGGGCCTAGCATACTGGTACGTGACGAGCAGAAGAGAGGATTACTTCCAAGAGTTGTTGAGGGTCTGTTTGATTGCATTAAATCTTCTGGAAGAACAATGAAGCACTCAATCAAATTGTCAATGGTAGAGATCTACATGGAAAGAGTAAGGGACCTTTTTGATTTAGCAAAAGACAACATACAGATTAAGGAGAGTAAATCGCAGGGGATATTGTTAAATGGAGTAACAGAGATCTCTGTGTCGAGTCCTGCAGAAGCATTGCAAAGCCTATCTAATGGCATAGCTAACAGAGCTGTGGGAGAGACCCAAATGAATGTGTCCAGCAGCAGAAGCCACTGCATATACATATTCACAGTTCAGCAAGAAGTAAAGAAAGATGAGAGGTCGAAAGCTGGAAAGTTAATTCTTGTAGACTTGGCTGGATCTGAGAAAGTAGAGAAAACTGGAGCTGAGGGAAAAGTTCTTGAAGAAGCTAAGACCATCAACAAGTCTCTCTCAGCCCTTGGAAATGTGATAAATGCTCTGACATGCGGGTCATCGGGCAAAGCAAACCACATTCCCTTCCGCGATTCCAAGCTCACTCGGATTTTACAAGATTCACTGGGAGGTAACTCGCGTACTGCATTGTTGTGTTGTTGCTCTCCAAGTCCTTCTAATGCATTGGAGAGTCTGTCCACTCTTCGCTTTGGGATGAGGGCAAAGCATATAAAGATGTCACCGCGTCTCAAGGGTAACGAAGATAAATCTGCTAAAAGGAACGGACCTCCCTCCCCAACTAAAGACGAGTCATGCGAGAGAATTCTTGGGATGAGATTTGATGCCGAAGATGTGAAGTTACTTGAGGAGTTGTTCACATTGAGCGGAATTCTCTTTGATCCTTCTTCGCCTGAAGAGGTAGACTCAGCATTGGCGGATGTTACTTCACAGACGATTACCTTACTGCAGCAAGCAGTGGAAGATCTTGCATCCACTGTTGAGGAGCTTAAGAGAGAGAATAAGGCACTGAAGAACGAATTAGCAGCTGCTAAAAGATTGGATGCACAAAGCGAAGCGGCTGGAGATACTTCAATTGTTCTGCATAAACCTTCAGGAATTATCAGTTCCGTTGTGTCACGGGTCAGGTCACTCTCTTCTATCAAGTTGTTGAAATGA

Protein Analysis

481

Amino Acids

52.48

Weight (kDa)

6.7

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 8 - 149 9.3e-20 Microtubule binding
Kinesin PF00225 9 - 333 2.2e-106 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011695)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 823
AccBSI CCGCTC 2 cut(s) 269, 1152
AccI GTMKAC 3 cut(s) 90, 702, 1188
AccII CGCG 3 cut(s) 858, 907, 1012
AciI CCGC 7 cut(s) 269, 822, 856, 1010, 1152, 1202, 1343
AclWI GGATC 2 cut(s) 721, 1160
AcsI RAATTY 4 cut(s) 131, 191, 1089, 1155
AcuI CTGAAG 3 cut(s) 1200, 1316, 1362
AfaI GTAC 2 cut(s) 309, 910
AflII CTTAAG 1 cut(s) 1274
AflIII ACRYGT 1 cut(s) 85
AgsI TTSAA 5 cut(s) 83, 112, 758, 1359, 1438
Alw21I GWGCWC 2 cut(s) 25, 44
Alw26I GTCTC 3 cut(s) 587, 786, 1019
AlwI GGATC 2 cut(s) 721, 1160
AoxI GGCC 2 cut(s) 32, 293
ApeKI GCWGC 4 cut(s) 615, 1234, 1310, 1313
ApoI RAATTY 4 cut(s) 131, 191, 1089, 1155
AspS9I GGNCC 3 cut(s) 293, 442, 1052
AsuHPI GGTGA 1 cut(s) 999
AvaII GGWCC 2 cut(s) 442, 1052
BanII GRGCYC 1 cut(s) 44
BbsI GAAGAC 1 cut(s) 281
Bbv12I GWGCWC 2 cut(s) 25, 44
BbvCI CCTCAGC 1 cut(s) 741
BbvI GCAGC 4 cut(s) 627, 1246, 1300, 1322
BccI CCATC 1 cut(s) 779
BceAI ACGGC 1 cut(s) 79
BcoDI GTCTC 3 cut(s) 587, 786, 1019
BfaI CTAG 2 cut(s) 197, 297
BfmI CTRYAG 2 cut(s) 540, 1232
BfrI CTTAAG 1 cut(s) 1274
BglII AGATCT 3 cut(s) 420, 522, 1249
BisI GCNGC 5 cut(s) 616, 1235, 1311, 1314, 1344
BlsI GCNGC 5 cut(s) 617, 1236, 1312, 1315, 1345
Bme18I GGWCC 2 cut(s) 442, 1052
BmgT120I GGNCC 3 cut(s) 293, 442, 1052
BmiI GGNNCC 2 cut(s) 294, 443
BmrI ACTGGG 1 cut(s) 902
BmsI GCATC 6 cut(s) 58, 208, 217, 1099, 1265, 1318
BmuI ACTGGG 1 cut(s) 902
BpiI GAAGAC 1 cut(s) 281
BplI GAGNNNNNCTC 2 cut(s) 1175, 1207
BpmI CTGGAG 3 cut(s) 285, 756, 1368
Bpu10I CCTNAGC 1 cut(s) 741
BpuEI CTTGAG 2 cut(s) 1001, 1151
BsaAI YACGTR 2 cut(s) 88, 311
BsaI GGTCTC 1 cut(s) 587
BsaJI CCNNGG 1 cut(s) 793
BsaXI ACNNNNNCTCC 4 cut(s) 77, 107, 947, 977
Bse1I ACTGG 4 cut(s) 268, 309, 739, 897
Bse3DI GCAATG 1 cut(s) 548
BseDI CCNNGG 1 cut(s) 793
BseGI GGATG 7 cut(s) 121, 130, 987, 1104, 1210, 1256, 1333
BseMI GCAATG 1 cut(s) 548
BseMII CTCAG 5 cut(s) 162, 708, 732, 801, 1206
BseNI ACTGG 4 cut(s) 268, 309, 739, 897
BseRI GAGGAG 2 cut(s) 1148, 1283
BseXI GCAGC 4 cut(s) 627, 1246, 1300, 1322
Bsh1236I CGCG 3 cut(s) 858, 907, 1012
Bsh1285I CGRYCG 1 cut(s) 246
BshFI GGCC 2 cut(s) 34, 295
BsiEI CGRYCG 1 cut(s) 246
BsiHKAI GWGCWC 2 cut(s) 25, 44
BsiSI CCGG 1 cut(s) 31
BslFI GGGAC 2 cut(s) 253, 455
BsmAI GTCTC 3 cut(s) 587, 786, 1019
BsmBI CGTCTC 1 cut(s) 1019
BsmFI GGGAC 2 cut(s) 253, 455
BsmI GAATGC 1 cut(s) 78
BsnI GGCC 2 cut(s) 34, 295
Bso31I GGTCTC 1 cut(s) 587
Bsp1286I GDGCHC 2 cut(s) 25, 44
Bsp143I GATC 7 cut(s) 58, 243, 420, 522, 713, 1165, 1249
BspACI CCGC 7 cut(s) 269, 822, 856, 1010, 1152, 1202, 1343
BspANI GGCC 2 cut(s) 34, 295
BspCNI CTCAG 5 cut(s) 163, 709, 733, 800, 1205
BspFNI CGCG 3 cut(s) 858, 907, 1012
BspLI GGNNCC 2 cut(s) 294, 443
BspMAI CTGCAG 2 cut(s) 544, 1236
BspPI GGATC 2 cut(s) 721, 1160
BspTI CTTAAG 1 cut(s) 1274
BspTNI GGTCTC 1 cut(s) 587
BsrBI CCGCTC 2 cut(s) 269, 1152
BsrDI GCAATG 1 cut(s) 548
BsrI ACTGG 4 cut(s) 268, 309, 739, 897
BssECI CCNNGG 1 cut(s) 793
BssMI GATC 7 cut(s) 58, 243, 420, 522, 713, 1165, 1249
BssT1I CCWWGG 1 cut(s) 793
Bst4CI ACNGT 2 cut(s) 646, 1264
Bst6I CTCTTC 5 cut(s) 49, 317, 975, 1176, 1426
BstAFI CTTAAG 1 cut(s) 1274
BstBAI YACGTR 2 cut(s) 88, 311
BstC8I GCNNGC 2 cut(s) 177, 1239
BstDEI CTNAG 6 cut(s) 171, 717, 741, 765, 787, 1192
BstF5I GGATG 7 cut(s) 121, 130, 987, 1104, 1210, 1256, 1333
BstFNI CGCG 3 cut(s) 858, 907, 1012
BstKTI GATC 7 cut(s) 61, 246, 423, 525, 716, 1168, 1252
BstMAI GTCTC 3 cut(s) 587, 786, 1019
BstMBI GATC 7 cut(s) 58, 243, 420, 522, 713, 1165, 1249
BstMCI CGRYCG 1 cut(s) 246
BstMWI GCNNNNNNNGC 4 cut(s) 211, 227, 581, 621
BstNSI RCATGY 1 cut(s) 822
BstSFI CTRYAG 2 cut(s) 540, 1232
BstUI CGCG 3 cut(s) 858, 907, 1012
BstV1I GCAGC 4 cut(s) 627, 1246, 1300, 1322
BstV2I GAAGAC 1 cut(s) 281
BstX2I RGATCY 4 cut(s) 420, 522, 713, 1249
BstYI RGATCY 4 cut(s) 420, 522, 713, 1249
BsuRI GGCC 2 cut(s) 34, 295
BtgZI GCGATG 1 cut(s) 81
BtsCI GGATG 7 cut(s) 121, 130, 987, 1104, 1210, 1256, 1333
BtsI GCAGTG 2 cut(s) 625, 1248
BtsIMutI CAGTG 5 cut(s) 625, 890, 1248, 1260, 1292
Cac8I GCNNGC 2 cut(s) 177, 1239
Cfr13I GGNCC 3 cut(s) 293, 442, 1052
CseI GACGC 1 cut(s) 1001
Csp6I GTAC 2 cut(s) 308, 909
CviAII CATG 4 cut(s) 286, 427, 819, 1080
CviQI GTAC 2 cut(s) 308, 909
DdeI CTNAG 6 cut(s) 171, 717, 741, 765, 787, 1192
DpnI GATC 7 cut(s) 60, 245, 422, 524, 715, 1167, 1251
DpnII GATC 7 cut(s) 58, 243, 420, 522, 713, 1165, 1249
DrdI GACNNNNNNGTC 1 cut(s) 823
DseDI GACNNNNNNGTC 1 cut(s) 823
Eam1104I CTCTTC 5 cut(s) 49, 317, 975, 1176, 1426
EarI CTCTTC 5 cut(s) 49, 317, 975, 1176, 1426
EciI GGCGGA 1 cut(s) 1217
Ecl136II GAGCTC 1 cut(s) 42
Eco130I CCWWGG 1 cut(s) 793
Eco24I GRGCYC 1 cut(s) 44
Eco31I GGTCTC 1 cut(s) 587
Eco47I GGWCC 2 cut(s) 442, 1052
Eco53kI GAGCTC 1 cut(s) 42
Eco57I CTGAAG 3 cut(s) 1200, 1316, 1362
EcoICRI GAGCTC 1 cut(s) 42
EcoO109I RGGNCCY 2 cut(s) 293, 442
EcoRI GAATTC 3 cut(s) 131, 1089, 1155
EcoT14I CCWWGG 1 cut(s) 793
EcoT22I ATGCAT 1 cut(s) 952
EcoT38I GRGCYC 1 cut(s) 44
ErhI CCWWGG 1 cut(s) 793
Esp3I CGTCTC 1 cut(s) 1019
FaeI CATG 4 cut(s) 289, 430, 822, 1083
FaqI GGGAC 2 cut(s) 253, 455
FatI CATG 4 cut(s) 285, 426, 818, 1079
FauI CCCGC 2 cut(s) 262, 815
FblI GTMKAC 3 cut(s) 90, 702, 1188
Fnu4HI GCNGC 5 cut(s) 616, 1235, 1311, 1314, 1344
FokI GGATG 7 cut(s) 128, 137, 994, 1111, 1217, 1243, 1340
FriOI GRGCYC 1 cut(s) 44
Fsp4HI GCNGC 5 cut(s) 616, 1235, 1311, 1314, 1344
FspBI CTAG 2 cut(s) 197, 297
GluI GCNGC 5 cut(s) 616, 1235, 1311, 1314, 1344
GsuI CTGGAG 3 cut(s) 285, 756, 1368
HaeIII GGCC 2 cut(s) 34, 295
HapII CCGG 1 cut(s) 31
HgaI GACGC 1 cut(s) 1001
Hin1II CATG 4 cut(s) 289, 430, 822, 1083
HinfI GANTC 8 cut(s) 27, 92, 535, 860, 887, 958, 1076, 1190
HpaII CCGG 1 cut(s) 31
HphI GGTGA 1 cut(s) 999
Hpy166II GTNNAC 5 cut(s) 91, 703, 966, 1143, 1189
Hpy188I TCNGA 5 cut(s) 97, 172, 718, 816, 876
Hpy188III TCNNGA 3 cut(s) 378, 755, 1380
Hpy8I GTNNAC 5 cut(s) 91, 703, 966, 1143, 1189
HpyAV CCTTC 5 cut(s) 115, 862, 951, 1179, 1386
HpyCH4III ACNGT 2 cut(s) 646, 1264
HpyCH4IV ACGT 2 cut(s) 87, 310
HpyF10VI GCNNNNNNNGC 4 cut(s) 211, 227, 581, 621
HpyF3I CTNAG 6 cut(s) 171, 717, 741, 765, 787, 1192
HpySE526I ACGT 2 cut(s) 87, 310
Hsp92II CATG 4 cut(s) 289, 430, 822, 1083
Kzo9I GATC 7 cut(s) 58, 243, 420, 522, 713, 1165, 1249
LmnI GCTCC 4 cut(s) 47, 266, 737, 1270
Lsp1109I GCAGC 4 cut(s) 627, 1246, 1300, 1322
LweI GCATC 6 cut(s) 58, 208, 217, 1099, 1265, 1318
MaeI CTAG 2 cut(s) 197, 297
MaeII ACGT 2 cut(s) 87, 310
MalI GATC 7 cut(s) 60, 245, 422, 524, 715, 1167, 1251
MbiI CCGCTC 2 cut(s) 269, 1152
MboI GATC 7 cut(s) 58, 243, 420, 522, 713, 1165, 1249
MfeI CAATTG 1 cut(s) 1359
MflI RGATCY 4 cut(s) 420, 522, 713, 1249
MhlI GDGCHC 2 cut(s) 25, 44
MluCI AATT 9 cut(s) 131, 191, 404, 693, 1089, 1155, 1304, 1359, 1383
MlyI GAGTC 5 cut(s) 86, 544, 967, 1085, 1184
Mph1103I ATGCAT 1 cut(s) 952
MseI TTAA 5 cut(s) 369, 477, 506, 692, 1275
MslI CAYNNNNRTG 2 cut(s) 66, 919
MspA1I CMGCKG 1 cut(s) 1313
MspCI CTTAAG 1 cut(s) 1274
MspI CCGG 1 cut(s) 31
MunI CAATTG 1 cut(s) 1359
Mva1269I GAATGC 1 cut(s) 78
MvnI CGCG 3 cut(s) 858, 907, 1012
MwoI GCNNNNNNNGC 4 cut(s) 211, 227, 581, 621
NdeII GATC 7 cut(s) 58, 243, 420, 522, 713, 1165, 1249
NlaIII CATG 4 cut(s) 289, 430, 822, 1083
NlaIV GGNNCC 2 cut(s) 294, 443
NmuCI GTSAC 4 cut(s) 311, 1005, 1401, 1413
NsiI ATGCAT 1 cut(s) 952
NspI RCATGY 1 cut(s) 822
PcsI WCGNNNNNNNCGW 2 cut(s) 93, 1080
PctI GAATGC 1 cut(s) 78
PfeI GAWTC 3 cut(s) 27, 860, 887
PkrI GCNGC 5 cut(s) 617, 1236, 1312, 1315, 1345
Ple19I CGATCG 1 cut(s) 246
PleI GAGTC 5 cut(s) 86, 543, 966, 1084, 1184
PpsI GAGTC 5 cut(s) 86, 543, 966, 1084, 1184
Ppu21I YACGTR 2 cut(s) 88, 311
PpuMI RGGWCCY 1 cut(s) 442
Psp124BI GAGCTC 1 cut(s) 44
Psp5II RGGWCCY 1 cut(s) 442
PspN4I GGNNCC 2 cut(s) 294, 443
PspPI GGNCC 3 cut(s) 293, 442, 1052
PspPPI RGGWCCY 1 cut(s) 442
PstI CTGCAG 2 cut(s) 544, 1236
PsuI RGATCY 4 cut(s) 420, 522, 713, 1249
PvuI CGATCG 1 cut(s) 246
PvuII CAGCTG 1 cut(s) 1313
RsaI GTAC 2 cut(s) 309, 910
RsaNI GTAC 2 cut(s) 308, 909
RseI CAYNNNNRTG 2 cut(s) 66, 919
SacI GAGCTC 1 cut(s) 44
SaqAI TTAA 5 cut(s) 369, 477, 506, 692, 1275
SatI GCNGC 5 cut(s) 616, 1235, 1311, 1314, 1344
Sau3AI GATC 7 cut(s) 58, 243, 420, 522, 713, 1165, 1249
Sau96I GGNCC 3 cut(s) 293, 442, 1052
SchI GAGTC 5 cut(s) 86, 544, 967, 1085, 1184
SduI GDGCHC 2 cut(s) 25, 44
SfaNI GCATC 6 cut(s) 58, 208, 217, 1099, 1265, 1318
SfcI CTRYAG 2 cut(s) 540, 1232
SinI GGWCC 2 cut(s) 442, 1052
SmiMI CAYNNNNRTG 2 cut(s) 66, 919
SmlI CTYRAG 3 cut(s) 1016, 1130, 1274
SmoI CTYRAG 3 cut(s) 1016, 1130, 1274
Sse9I AATT 9 cut(s) 131, 191, 404, 693, 1089, 1155, 1304, 1359, 1383
SsiI CCGC 7 cut(s) 269, 822, 856, 1010, 1152, 1202, 1343
SspMI CTAG 2 cut(s) 197, 297
SstI GAGCTC 1 cut(s) 44
StyI CCWWGG 1 cut(s) 793
TaaI ACNGT 2 cut(s) 646, 1264
TaiI ACGT 2 cut(s) 90, 313
TaqI TCGA 3 cut(s) 25, 533, 677
TasI AATT 9 cut(s) 131, 191, 404, 693, 1089, 1155, 1304, 1359, 1383
TauI GCSGC 1 cut(s) 1346
TfiI GAWTC 3 cut(s) 27, 860, 887
Tru1I TTAA 5 cut(s) 369, 477, 506, 692, 1275
Tru9I TTAA 5 cut(s) 369, 477, 506, 692, 1275
TscAI CASTG 5 cut(s) 632, 897, 1248, 1267, 1299
TseFI GTSAC 4 cut(s) 311, 1005, 1401, 1413
TseI GCWGC 4 cut(s) 615, 1234, 1310, 1313
Tsp45I GTSAC 4 cut(s) 311, 1005, 1401, 1413
TspDTI ATGAA 4 cut(s) 141, 204, 404, 617
TspGWI ACGGA 2 cut(s) 1065, 1384
TspRI CASTG 5 cut(s) 632, 897, 1248, 1267, 1299
Vha464I CTTAAG 1 cut(s) 1274
VpaK11BI GGWCC 2 cut(s) 442, 1052
XapI RAATTY 4 cut(s) 131, 191, 1089, 1155
XceI RCATGY 1 cut(s) 822
XmiI GTMKAC 3 cut(s) 90, 702, 1188
XspI CTAG 2 cut(s) 197, 297
Zsp2I ATGCAT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.